Pregenerated sensors for LYPD8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000013643Ensembl transcript IDs: ENSMUST00000013787.11, ENSMUST00000108826.3
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATCTCCAAAGCAAAGACCCCACCTCCACCCAGAGATGAGAAGGGTTaGGCAGTGAATAGCAACCAGCCCCAAACATATCAGAACAGATTG | + |
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Preference number: 1 (lower is better) Translates to: ISKAKTPPPPRDEKG*AVNSNQPQTYQNRL Trigger: CAATCTGTTCTGATATGTTTGGGGCTGGTTGCTATTCACTGCCCAACCCTTCTCATCTCTGGGTGGAGGTGGGGTCTTTGCTTTGGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108826.3 |
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| 3UTR CCA 90 bp | AAGCAACACTTTAATAAAGGAGATACTGTGGCTGCTAGCATTGCCTaGAGTCCTGTGACTTCCAACCCACTGGACAGTCTAACTGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: KQHFNKGDTVAASIA*SPVTSNPLDSLTGR Trigger: CCTTCCAGTTAGACTGTCCAGTGGGTTGGAAGTCACAGGACTCCAGGCAATGCTAGCAGCCACAGTATCTCCTTTATTAAAGTGTTGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| 3UTR CCA 90 bp | AGAAGGTACCAGAAAAGCCATGGATTTAGCTTCTCAGATGCAAGATaGACCAGGAACAGAGACGTCATTGAGTCCGGAGGCAAAGAAACA | + |
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Preference number: 1 (lower is better) Translates to: RRYQKSHGFSFSDAR*TRNRDVIESGGKET Trigger: TGTTTCTTTGCCTCCGGACTCAATGACGTCTCTGTTCCTGGTCCATCTTGCATCTGAGAAGCTAAATCCATGGCTTTTCTGGTACCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108826.3 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGTCCTGTGACTTCCAACCCACTGGACAGTCTAACTGGAAGGTATATGAAACACCCATGGGATACTaGATGGAGCAGAGCCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LESCDFQPTGQSNWKVYETPMGY*MEQSPG Trigger: TCCTGGGCTCTGCTCCATCCAGTATCCCATGGGTGT...TTCATATACCTTCCAGTTAGACTGTCCAGTGGGTTGGAAGTCACAGGACTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| 3UTR CCA 72 bp | GCAAAGACCCCACCTCCACCCAGAGATGAGAAGGGTTaGGCAGTGAATAGCAACCAGCCCCAAACATATCAG | + |
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Preference number: 3 (lower is better) Translates to: AKTPPPPRDEKG*AVNSNQPQTYQ Trigger: CTGATATGTTTGGGGCTGGTTGCTATTCACTGCCCAACCCTTCTCATCTCTGGGTGGAGGTGGGGTCTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108826.3 |
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| 3UTR TCA 72 bp | CCCCACCTCCACCCAGAGATGAGAAGGGTTGGGCAGTaGATAGCAACCAGCCCCAAACATATCAGAACAGAT | + |
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Preference number: 3 (lower is better) Translates to: PHLHPEMRRVGQ*IATSPKHIRTD Trigger: ATCTGTTCTGATATGTTTGGGGCTGGTTGCTATTCACTGCCCAACCCTTCTCATCTCTGGGTGGAGGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108826.3 |
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| 3UTR TCA 72 bp | CTCAGATGCAAGATGGACCAGGAACAGAGACGTCATTaGGTCCGGAGGCAAAGAAACACCTATCTCCAAAGC | + |
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Preference number: 3 (lower is better) Translates to: LRCKMDQEQRRH*VRRQRNTYLQS Trigger: GCTTTGGAGATAGGTGTTTCTTTGCCTCCGGACTCAATGACGTCTCTGTTCCTGGTCCATCTTGCATCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108826.3 |
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| 3UTR-3UTR CAA 90 bp | AAGAAACACCTATCTCCAAAGCAAAGACCCCACCTCCACCCAGAGATGAGAAGGATGAAGAGAAAGGTGTaGACACCCATGGGATACTGG | + |
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Preference number: 3 (lower is better) Translates to: KKHLSPKQRPHLHPEMRRMKRKV*TPMGYW Trigger: CCAGTATCCCATGGGTGTCAACACCTTTCTCTTCAT...CCTTCTCATCTCTGGGTGGAGGTGGGGTCTTTGCTTTGGAGATAGGTGTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108826.3 |
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| 3UTR CCA 72 bp | GAGTCCTGTGACTTCCAACCCACTGGACAGTCTAACTaGAAGGTATATGAAGAGAAAGGTGTTGACACCCAT | + |
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Preference number: 3 (lower is better) Translates to: ESCDFQPTGQSN*KVYEEKGVDTH Trigger: ATGGGTGTCAACACCTTTCTCTTCATATACCTTCCAGTTAGACTGTCCAGTGGGTTGGAAGTCACAGGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| 3UTR CCA 72 bp | TTTAATAAAGGAGATACTGTGGCTGCTAGCATTGCCTaGAGTCCTGTGACTTCCAACCCACTGGACAGTCTA | + |
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Preference number: 3 (lower is better) Translates to: FNKGDTVAASIA*SPVTSNPLDSL Trigger: TAGACTGTCCAGTGGGTTGGAAGTCACAGGACTCCAGGCAATGCTAGCAGCCACAGTATCTCCTTTATTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR CCA 90 bp | CCGGAGGCAAAGAAACACCTATCTCCAAAGCAAAGACCCCACCTCCACCCAGAGCGGATTCAGAGTGGGTaGCATTGCAGGACTCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: PEAKKHLSPKQRPHLHPERIQSG*HCRTLL Trigger: AAGGAGAGTCCTGCAATGCCACCCACTCTGAATCCG...CTCTGGGTGGAGGTGGGGTCTTTGCTTTGGAGATAGGTGTTTCTTTGCCTCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108826.3 |
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| CDS-3UTR CCA 90 bp | CCGGAGGCAAAGAAACACCTATCTCCAAAGCAAAGACCCCACCTCCACCCAGAGGAGCAGAACTTGTTCTaGTACACATGCAGGAACCCT | + |
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Preference number: 4 (lower is better) Translates to: PEAKKHLSPKQRPHLHPEEQNLF*YTCRNP Trigger: AGGGTTCCTGCATGTGTACCAGAACAAGTTCTGCTC...CTCTGGGTGGAGGTGGGGTCTTTGCTTTGGAGATAGGTGTTTCTTTGCCTCCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108826.3 |
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| CDS-3UTR CCA 90 bp | AAAGGAGATACTGTGGCTGCTAGCATTGCCTGGAGTCCTGTGACTTCCAACCCACGGATTCAGAGTGGGTaGCATTGCAGGACTCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: KGDTVAASIAWSPVTSNPRIQSG*HCRTLL Trigger: AAGGAGAGTCCTGCAATGCCACCCACTCTGAATCCG...TGGGTTGGAAGTCACAGGACTCCAGGCAATGCTAGCAGCCACAGTATCTCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR GCA 90 bp | GCCTGGAGTCCTGTGACTTCCAACCCACTGGACAGTCTAACTGGAAGGTATATGAACTGTGATGGCGAATaGCGCAATGACACCAGCGAT | + |
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Preference number: 4 (lower is better) Translates to: AWSPVTSNPLDSLTGRYMNCDGE*RNDTSD Trigger: ATCGCTGGTGTCATTGCGGCATTCGCCATCACAGTT...CATATACCTTCCAGTTAGACTGTCCAGTGGGTTGGAAGTCACAGGACTCCAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR GCA 90 bp | TCCGGAGGCAAAGAAACACCTATCTCCAAAGCAAAGACCCCACCTCCACCCAGATTGTTCTGGTACACATaGAGGAACCCTCCTAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: SGGKETPISKAKTPPPPRLFWYT*RNPPRV Trigger: CACTCTAGGAGGGTTCCTGCATGTGTACCAGAACAA...TCTGGGTGGAGGTGGGGTCTTTGCTTTGGAGATAGGTGTTTCTTTGCCTCCGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108826.3 |
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| CDS-3UTR CCA 90 bp | AAGAAACACCTATCTCCAAAGCAAAGACCCCACCTCCACCCAGAGATGAGAAGGGTTCCGGATTCAGAGTaGGTGGCATTGCAGGACTCT | + |
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Preference number: 4 (lower is better) Translates to: KKHLSPKQRPHLHPEMRRVPDSE*VALQDS Trigger: AGAGTCCTGCAATGCCACCCACTCTGAATCCGGAAC...CCTTCTCATCTCTGGGTGGAGGTGGGGTCTTTGCTTTGGAGATAGGTGTTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108826.3 |
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| CDS-3UTR TCA 90 bp | GGAGGCAAAGAAACACCTATCTCCAAAGCAAAGACCCCACCTCCACCCAGAGATAGGACTCCACACAACTaGAGGACTGCTCATTGCATT | + |
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Preference number: 4 (lower is better) Translates to: GGKETPISKAKTPPPPRDRTPHN*RTAHCI Trigger: AATGCAATGAGCAGTCCTTCAGTTGTGTGGAGTCCT...ATCTCTGGGTGGAGGTGGGGTCTTTGCTTTGGAGATAGGTGTTTCTTTGCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108826.3 |
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| CDS-3UTR GCA 90 bp | TATGAAGAGAAAGGTGTTGACACCCATGGGATACTGGATGGAGCAGAGCCCAGGTTGTTCTGGTACACATaGAGGAACCCTCCTAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: YEEKGVDTHGILDGAEPRLFWYT*RNPPRV Trigger: CACTCTAGGAGGGTTCCTGCATGTGTACCAGAACAA...CCTGGGCTCTGCTCCATCCAGTATCCCATGGGTGTCAACACCTTTCTCTTCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR GCA 90 bp | GAAGAGAAAGGTGTTGACACCCATGGGATACTGGATGGAGCAGAGCCCAGGAACTTGGCAGCACTGGCTTaGAAAATGGTATCTTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: EEKGVDTHGILDGAEPRNLAALA*KMVSLV Trigger: GACCAAAGATACCATTTTGCAAGCCAGTGCTGCCAA...GTTCCTGGGCTCTGCTCCATCCAGTATCCCATGGGTGTCAACACCTTTCTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR CCA 90 bp | TATGAAGAGAAAGGTGTTGACACCCATGGGATACTGGATGGAGCAGAGCCCAGGGAGCAGAACTTGTTCTaGTACACATGCAGGAACCCT | + |
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Preference number: 4 (lower is better) Translates to: YEEKGVDTHGILDGAEPREQNLF*YTCRNP Trigger: AGGGTTCCTGCATGTGTACCAGAACAAGTTCTGCTC...CCTGGGCTCTGCTCCATCCAGTATCCCATGGGTGTCAACACCTTTCTCTTCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR CCA 90 bp | GCCTGGAGTCCTGTGACTTCCAACCCACTGGACAGTCTAACTGGAAGGTATATGTGGTCATCAAATAGATaGACAGTGAAGGCCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: AWSPVTSNPLDSLTGRYMWSSNR*TVKATS Trigger: GGAGGTGGCCTTCACTGTCCATCTATTTGATGACCA...CATATACCTTCCAGTTAGACTGTCCAGTGGGTTGGAAGTCACAGGACTCCAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR CCA 90 bp | TATGAAGAGAAAGGTGTTGACACCCATGGGATACTGGATGGAGCAGAGCCCAGGTGGTCATCAAATAGATaGACAGTGAAGGCCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: YEEKGVDTHGILDGAEPRWSSNR*TVKATS Trigger: GGAGGTGGCCTTCACTGTCCATCTATTTGATGACCA...CCTGGGCTCTGCTCCATCCAGTATCCCATGGGTGTCAACACCTTTCTCTTCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR TCA 90 bp | AAGAAACACCTATCTCCAAAGCAAAGACCCCACCTCCACCCAGAGATGAGAAGGCCAGGGGACAGGAATTaGCAAGTAGAGTTGCTGATA | + |
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Preference number: 4 (lower is better) Translates to: KKHLSPKQRPHLHPEMRRPGDRN*QVELLI Trigger: TATCAGCAACTCTACTTGTCAATTCCTGTCCCCTGG...CCTTCTCATCTCTGGGTGGAGGTGGGGTCTTTGCTTTGGAGATAGGTGTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108826.3 |
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| CDS-3UTR CCA 90 bp | AGTCCTGTGACTTCCAACCCACTGGACAGTCTAACTGGAAGGTATATGAAGAGAGTTCCGGATTCAGAGTaGGTGGCATTGCAGGACTCT | + |
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Preference number: 4 (lower is better) Translates to: SPVTSNPLDSLTGRYMKRVPDSE*VALQDS Trigger: AGAGTCCTGCAATGCCACCCACTCTGAATCCGGAAC...TCTCTTCATATACCTTCCAGTTAGACTGTCCAGTGGGTTGGAAGTCACAGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| 3UTR CAA 72 bp | TCTCAGATGCAAGATGGACCAGGAACAGAGACGTCATaGAGTCCGGAGGCAAAGAAACACCTATCTCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: SQMQDGPGTETS*SPEAKKHLSPK Trigger: CTTTGGAGATAGGTGTTTCTTTGCCTCCGGACTCAATGACGTCTCTGTTCCTGGTCCATCTTGCATCTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108826.3 |
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| CDS-3UTR TCA 90 bp | CTGGAGTCCTGTGACTTCCAACCCACTGGACAGTCTAACTGGAAGGTATATGAAAGGACTCCACACAACTaGAGGACTGCTCATTGCATT | + |
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Preference number: 4 (lower is better) Translates to: LESCDFQPTGQSNWKVYERTPHN*RTAHCI Trigger: AATGCAATGAGCAGTCCTTCAGTTGTGTGGAGTCCT...TTCATATACCTTCCAGTTAGACTGTCCAGTGGGTTGGAAGTCACAGGACTCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR GCA 90 bp | AGTCCTGTGACTTCCAACCCACTGGACAGTCTAACTGGAAGGTATATGAAGAGAAACTGTGATGGCGAATaGCGCAATGACACCAGCGAT | + |
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Preference number: 4 (lower is better) Translates to: SPVTSNPLDSLTGRYMKRNCDGE*RNDTSD Trigger: ATCGCTGGTGTCATTGCGGCATTCGCCATCACAGTT...TCTCTTCATATACCTTCCAGTTAGACTGTCCAGTGGGTTGGAAGTCACAGGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR CCA 90 bp | CAACCCACTGGACAGTCTAACTGGAAGGTATATGAAGAGAAAGGTGTTGACACCGGAAGTGTTGGTGATTaGTGGGATAGTGGTGGTCGA | + |
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Preference number: 4 (lower is better) Translates to: QPTGQSNWKVYEEKGVDTGSVGD*WDSGGR Trigger: TCGACCACCACTATCCCACCAATCACCAACACTTCC...GGTGTCAACACCTTTCTCTTCATATACCTTCCAGTTAGACTGTCCAGTGGGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR CCA 90 bp | CTGGACAGTCTAACTGGAAGGTATATGAAGAGAAAGGTGTTGACACCCATGGGAGGAAGTGTTGGTGATTaGTGGGATAGTGGTGGTCGA | + |
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Preference number: 4 (lower is better) Translates to: LDSLTGRYMKRKVLTPMGGSVGD*WDSGGR Trigger: TCGACCACCACTATCCCACCAATCACCAACACTTCC...TCCCATGGGTGTCAACACCTTTCTCTTCATATACCTTCCAGTTAGACTGTCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR TCA 90 bp | CTGGACAGTCTAACTGGAAGGTATATGAAGAGAAAGGTGTTGACACCCATGGGACCAGGGGACAGGAATTaGCAAGTAGAGTTGCTGATA | + |
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Preference number: 4 (lower is better) Translates to: LDSLTGRYMKRKVLTPMGPGDRN*QVELLI Trigger: TATCAGCAACTCTACTTGTCAATTCCTGTCCCCTGG...TCCCATGGGTGTCAACACCTTTCTCTTCATATACCTTCCAGTTAGACTGTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR CCA 90 bp | GAGTCCTGTGACTTCCAACCCACTGGACAGTCTAACTGGAAGGTATATGAAGAGAGTTGGTATACTCAGTaGGTTGCGTACATTCAACCG | + |
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Preference number: 4 (lower is better) Translates to: ESCDFQPTGQSNWKVYEESWYTQ*VAYIQP Trigger: CGGTTGAATGTACGCAACCCACTGAGTATACCAACT...CTCTTCATATACCTTCCAGTTAGACTGTCCAGTGGGTTGGAAGTCACAGGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR CCA 90 bp | GAAGAGAAAGGTGTTGACACCCATGGGATACTGGATGGAGCAGAGCCCAGGAACGCAAAATGGTATCTTTaGTCATCAAATAGATGGACA | + |
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Preference number: 4 (lower is better) Translates to: EEKGVDTHGILDGAEPRNAKWYL*SSNRWT Trigger: TGTCCATCTATTTGATGACCAAAGATACCATTTTGC...GTTCCTGGGCTCTGCTCCATCCAGTATCCCATGGGTGTCAACACCTTTCTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR CCA 90 bp | CTGGACAGTCTAACTGGAAGGTATATGAAGAGAAAGGTGTTGACACCCATGGGATCTCCTTGGCAGCACTaGCTTGCAAAATGGTATCTT | + |
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Preference number: 4 (lower is better) Translates to: LDSLTGRYMKRKVLTPMGSPWQH*LAKWYL Trigger: AAGATACCATTTTGCAAGCCAGTGCTGCCAAGGAGA...TCCCATGGGTGTCAACACCTTTCTCTTCATATACCTTCCAGTTAGACTGTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR CCA 90 bp | TGGAAGGTATATGAAGAGAAAGGTGTTGACACCCATGGGATACTGGATGGAGCAAGTTGGTATACTCAGTaGGTTGCGTACATTCAACCG | + |
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Preference number: 4 (lower is better) Translates to: WKVYEEKGVDTHGILDGASWYTQ*VAYIQP Trigger: CGGTTGAATGTACGCAACCCACTGAGTATACCAACT...TGCTCCATCCAGTATCCCATGGGTGTCAACACCTTTCTCTTCATATACCTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR CCA 90 bp | AGTCTAACTGGAAGGTATATGAAGAGAAAGGTGTTGACACCCATGGGATACTGGTCTCCTTGGCAGCACTaGCTTGCAAAATGGTATCTT | + |
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Preference number: 4 (lower is better) Translates to: SLTGRYMKRKVLTPMGYWSPWQH*LAKWYL Trigger: AAGATACCATTTTGCAAGCCAGTGCTGCCAAGGAGA...CCAGTATCCCATGGGTGTCAACACCTTTCTCTTCATATACCTTCCAGTTAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR TCA 90 bp | CAACCCACTGGACAGTCTAACTGGAAGGTATATGAAGAGAAAGGTGTTGACACCTACATTCAACCGACTTaGAAACAAACTCTCCAACTG | + |
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Preference number: 4 (lower is better) Translates to: QPTGQSNWKVYEEKGVDTYIQPT*KQTLQL Trigger: CAGTTGGAGAGTTTGTTTTCAAGTCGGTTGAATGTA...GGTGTCAACACCTTTCTCTTCATATACCTTCCAGTTAGACTGTCCAGTGGGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR CCA 90 bp | GAGTCCTGTGACTTCCAACCCACTGGACAGTCTAACTGGAAGGTATATGAAGAGCACTGGCTTGCAAAATaGTATCTTTGGTCATCAAAT | + |
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Preference number: 4 (lower is better) Translates to: ESCDFQPTGQSNWKVYEEHWLAK*YLWSSN Trigger: ATTTGATGACCAAAGATACCATTTTGCAAGCCAGTG...CTCTTCATATACCTTCCAGTTAGACTGTCCAGTGGGTTGGAAGTCACAGGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR CCA 90 bp | CTGGACAGTCTAACTGGAAGGTATATGAAGAGAAAGGTGTTGACACCCATGGGACACTGGCTTGCAAAATaGTATCTTTGGTCATCAAAT | + |
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Preference number: 4 (lower is better) Translates to: LDSLTGRYMKRKVLTPMGHWLAK*YLWSSN Trigger: ATTTGATGACCAAAGATACCATTTTGCAAGCCAGTG...TCCCATGGGTGTCAACACCTTTCTCTTCATATACCTTCCAGTTAGACTGTCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS CCA 90 bp | TCCGTGCTGTTCTCGGTGCAATTCGATGCGGAGCAGAACTTGTTCTaGTACACATGCAGGAACCCTCCTAGAGTGGAGTTGATAGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: SVLFSVQFDAEQNLF*YTCRNPPRVELIED Trigger: GTCCTCTATCAACTCCACTCTAGGAGGGTTCCTGCATGTGTACCAGAACAAGTTCTGCTCCGCATCGAATTGCACCGAGAACAGCACGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR CAA 90 bp | GAAACACCTATCTCCAAAGCAAAGACCCCACCTCCACCCAGAGATGAGAAGGGTGATGCGGAGCAGAACTaGTTCTGGTACACATGCAGG | + |
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Preference number: 5 (lower is better) Translates to: ETPISKAKTPPPPRDEKGDAEQN*FWYTCR Trigger: CCTGCATGTGTACCAGAACAAGTTCTGCTCCGCATC...ACCCTTCTCATCTCTGGGTGGAGGTGGGGTCTTTGCTTTGGAGATAGGTGTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108826.3 |
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| CDS-3UTR CAA 90 bp | TCCGGAGGCAAAGAAACACCTATCTCCAAAGCAAAGACCCCACCTCCACCCAGATCCTTCGTAACACTTTaGGGGTTTCTCCTCGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: SGGKETPISKAKTPPPPRSFVTL*GFLLAE Trigger: CTCTGCGAGGAGAAACCCCAAAAGTGTTACGAAGGA...TCTGGGTGGAGGTGGGGTCTTTGCTTTGGAGATAGGTGTTTCTTTGCCTCCGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108826.3 |
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| CDS-3UTR CAA 90 bp | ATGAAGAGAAAGGTGTTGACACCCATGGGATACTGGATGGAGCAGAGCCCAGGAGAGGTGAGGGAAGTGTaGGTGATTGGTGGGATAGTG | + |
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Preference number: 5 (lower is better) Translates to: MKRKVLTPMGYWMEQSPGEVREV*VIGGIV Trigger: CACTATCCCACCAATCACCAACACTTCCCTCACCTC...TCCTGGGCTCTGCTCCATCCAGTATCCCATGGGTGTCAACACCTTTCTCTTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR CAA 90 bp | GAAACACCTATCTCCAAAGCAAAGACCCCACCTCCACCCAGAGATGAGAAGGGTGAGGTGAGGGAAGTGTaGGTGATTGGTGGGATAGTG | + |
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Preference number: 5 (lower is better) Translates to: ETPISKAKTPPPPRDEKGEVREV*VIGGIV Trigger: CACTATCCCACCAATCACCAACACTTCCCTCACCTC...ACCCTTCTCATCTCTGGGTGGAGGTGGGGTCTTTGCTTTGGAGATAGGTGTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108826.3 |
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| CDS GCA 90 bp | CCTCCTAGAGTGGAGTTGATAGAGGACTCCACACAACTGAAGGACTaGTCATTGCATTCAGTGGCCTGGCCATCACAGGTGCTATTGTAC | + |
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Preference number: 5 (lower is better) Translates to: PPRVELIEDSTQLKD*SLHSVAWPSQVLLY Trigger: GTACAATAGCACCTGTGATGGCCAGGCCACTGAATGCAATGAGCAGTCCTTCAGTTGTGTGGAGTCCTCTATCAACTCCACTCTAGGAGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS CCA 90 bp | TGGGTGGCATTGCAGGACTCTCCTTGGCAGCACTGGCTTGCAAAATaGTATCTTTGGTCATCAAATAGATGGACAGTGAAGGCCACCTCC | + |
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Preference number: 5 (lower is better) Translates to: WVALQDSPWQHWLAK*YLWSSNRWTVKATS Trigger: GGAGGTGGCCTTCACTGTCCATCTATTTGATGACCAAAGATACCATTTTGCAAGCCAGTGCTGCCAAGGAGAGTCCTGCAATGCCACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS CCA 90 bp | TGCACTGCATGTCAGTTACATTCTGTGTTCCGGATTCAGAGTGGGTaGCATTGCAGGACTCTCCTTGGCAGCACTGGCTTGCAAAATGGT | + |
|
Preference number: 5 (lower is better) Translates to: CTACQLHSVFRIQSG*HCRTLLGSTGLQNG Trigger: ACCATTTTGCAAGCCAGTGCTGCCAAGGAGAGTCCTGCAATGCCACCCACTCTGAATCCGGAACACAGAATGTAACTGACATGCAGTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR CAA 90 bp | TATGAAGAGAAAGGTGTTGACACCCATGGGATACTGGATGGAGCAGAGCCCAGGCCCAGGGGACAGGAATaGACAAGTAGAGTTGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: YEEKGVDTHGILDGAEPRPRGQE*TSRVAD Trigger: ATCAGCAACTCTACTTGTCAATTCCTGTCCCCTGGG...CCTGGGCTCTGCTCCATCCAGTATCCCATGGGTGTCAACACCTTTCTCTTCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR CAA 90 bp | GAGTCCTGTGACTTCCAACCCACTGGACAGTCTAACTGGAAGGTATATGAAGAGGAGGTGAAGGAAGCTTaGGTGCCCATGCTAGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ESCDFQPTGQSNWKVYEEEVKEA*VPMLAC Trigger: ACAGGCTAGCATGGGCACCAAAGCTTCCTTCACCTC...CTCTTCATATACCTTCCAGTTAGACTGTCCAGTGGGTTGGAAGTCACAGGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS GCA 90 bp | TTCTCGGTGCAATTCGATGCGGAGCAGAACTTGTTCTGGTACACATaGAGGAACCCTCCTAGAGTGGAGTTGATAGAGGACTCCACACAA | + |
|
Preference number: 5 (lower is better) Translates to: FSVQFDAEQNLFWYT*RNPPRVELIEDSTQ Trigger: TTGTGTGGAGTCCTCTATCAACTCCACTCTAGGAGGGTTCCTGCATGTGTACCAGAACAAGTTCTGCTCCGCATCGAATTGCACCGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS CCA 90 bp | CCGGATTCAGAGTGGGTGGCATTGCAGGACTCTCCTTGGCAGCACTaGCTTGCAAAATGGTATCTTTGGTCATCAAATAGATGGACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PDSEWVALQDSPWQH*LAKWYLWSSNRWTV Trigger: CACTGTCCATCTATTTGATGACCAAAGATACCATTTTGCAAGCCAGTGCTGCCAAGGAGAGTCCTGCAATGCCACCCACTCTGAATCCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR CAA 90 bp | AGTCCTGTGACTTCCAACCCACTGGACAGTCTAACTGGAAGGTATATGAAGAGAGAGGTGAAGGAAGCTTaGGTGCCCATGCTAGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SPVTSNPLDSLTGRYMKREVKEA*VPMLAC Trigger: ACAGGCTAGCATGGGCACCAAAGCTTCCTTCACCTC...TCTCTTCATATACCTTCCAGTTAGACTGTCCAGTGGGTTGGAAGTCACAGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS CCA 90 bp | TGGCAGCACTGGCTTGCAAAATGGTATCTTTGGTCATCAAATAGATaGACAGTGAAGGCCACCTCCGTGCTGTTCTCGGTGCAATTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: WQHWLAKWYLWSSNR*TVKATSVLFSVQFD Trigger: ATCGAATTGCACCGAGAACAGCACGGAGGTGGCCTTCACTGTCCATCTATTTGATGACCAAAGATACCATTTTGCAAGCCAGTGCTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR CAA 90 bp | AGTCCTGTGACTTCCAACCCACTGGACAGTCTAACTGGAAGGTATATGAAGAGAATTGCAGGACTCTCCTaGGCAGCACTGGCTTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SPVTSNPLDSLTGRYMKRIAGLS*AALACK Trigger: TTTGCAAGCCAGTGCTGCCAAGGAGAGTCCTGCAAT...TCTCTTCATATACCTTCCAGTTAGACTGTCCAGTGGGTTGGAAGTCACAGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS CCA 90 bp | TTCTGTGTTCCGGATTCAGAGTGGGTGGCATTGCAGGACTCTCCTTaGCAGCACTGGCTTGCAAAATGGTATCTTTGGTCATCAAATAGA | + |
|
Preference number: 5 (lower is better) Translates to: FCVPDSEWVALQDSP*QHWLAKWYLWSSNR Trigger: TCTATTTGATGACCAAAGATACCATTTTGCAAGCCAGTGCTGCCAAGGAGAGTCCTGCAATGCCACCCACTCTGAATCCGGAACACAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR CAA 90 bp | AGTCTAACTGGAAGGTATATGAAGAGAAAGGTGTTGACACCCATGGGATACTGGGATGCGGAGCAGAACTaGTTCTGGTACACATGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLTGRYMKRKVLTPMGYWDAEQN*FWYTCR Trigger: CCTGCATGTGTACCAGAACAAGTTCTGCTCCGCATC...CCAGTATCCCATGGGTGTCAACACCTTTCTCTTCATATACCTTCCAGTTAGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR CAA 90 bp | GAGTCCTGTGACTTCCAACCCACTGGACAGTCTAACTGGAAGGTATATGAAGAGCTTGGCAGCACTGGCTaGCAAAATGGTATCTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ESCDFQPTGQSNWKVYEELGSTG*QNGIFG Trigger: ACCAAAGATACCATTTTGCAAGCCAGTGCTGCCAAG...CTCTTCATATACCTTCCAGTTAGACTGTCCAGTGGGTTGGAAGTCACAGGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR CAA 90 bp | CAACCCACTGGACAGTCTAACTGGAAGGTATATGAAGAGAAAGGTGTTGACACCTCCTTCGTAACACTTTaGGGGTTTCTCCTCGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QPTGQSNWKVYEEKGVDTSFVTL*GFLLAE Trigger: CTCTGCGAGGAGAAACCCCAAAAGTGTTACGAAGGA...GGTGTCAACACCTTTCTCTTCATATACCTTCCAGTTAGACTGTCCAGTGGGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS GCA 90 bp | GTGATTGGTGGGATAGTGGTGGTCGAGTTGGTATACTCAGTGGGTTaGGTACATTCAACCGACTTGAAAACAAACTCTCCAACTGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VIGGIVVVELVYSVG*VHSTDLKTNSPTVV Trigger: CACAACAGTTGGAGAGTTTGTTTTCAAGTCGGTTGAATGTACGCAACCCACTGAGTATACCAACTCGACCACCACTATCCCACCAATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS TCA 90 bp | TTGAAAACAAACTCTCCAACTGTTGTGTTCCCAGGGGACAGGAATTaGCAAGTAGAGTTGCTGATATCAGAACAGCCCTTCAGCTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: LKTNSPTVVFPGDRN*QVELLISEQPFSST Trigger: AGTGGAGCTGAAGGGCTGTTCTGATATCAGCAACTCTACTTGTCAATTCCTGTCCCCTGGGAACACAACAGTTGGAGAGTTTGTTTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS-3UTR CAA 90 bp | AGTCTAACTGGAAGGTATATGAAGAGAAAGGTGTTGACACCCATGGGATACTGGCTTGGCAGCACTGGCTaGCAAAATGGTATCTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SLTGRYMKRKVLTPMGYWLGSTG*QNGIFG Trigger: ACCAAAGATACCATTTTGCAAGCCAGTGCTGCCAAG...CCAGTATCCCATGGGTGTCAACACCTTTCTCTTCATATACCTTCCAGTTAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS CCA 72 bp | GGAGGTGAAGGAAGCTTTGGTGCCCATGCTAGCCTGTaGGGTAACAGAGGCGGGGGAAGTTTTGATGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GGEGSFGAHASL*GNRGGGSFDAW Trigger: CCAGGCATCAAAACTTCCCCCGCCTCTGTTACCCCACAGGCTAGCATGGGCACCAAAGCTTCCTTCACCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS CAA 72 bp | ATGCTAGCCTGTGGGGTAACAGAGGCGGGGGAAGTTTaGATGCCTGGTCGGGTAACAGAGGTGAGGGAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: MLACGVTEAGEV*MPGRVTEVREV Trigger: CACTTCCCTCACCTCTGTTACCCGACCAGGCATCAAAACTTCCCCCGCCTCTGTTACCCCACAGGCTAGCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS CAA 72 bp | AGAAGGCTGCCGAAGATAGAGGAGGTGAAGGAAGCTTaGGTGCCCATGCTAGCCTGTGGGGTAACAGAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RRLPKIEEVKEA*VPMLACGVTEA Trigger: CGCCTCTGTTACCCCACAGGCTAGCATGGGCACCAAAGCTTCCTTCACCTCCTCTATCTTCGGCAGCCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS CAA 90 bp | TTCAGAAGAAGAAGGCTGCCGAAGATAGAGGAGGTGAAGGAAGCTTaGGTGCCCATGCTAGCCTGTGGGGTAACAGAGGCGGGGGAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: FRRRRLPKIEEVKEA*VPMLACGVTEAGEV Trigger: AACTTCCCCCGCCTCTGTTACCCCACAGGCTAGCATGGGCACCAAAGCTTCCTTCACCTCCTCTATCTTCGGCAGCCTTCTTCTTCTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS GCA 72 bp | GAAGGCCACCTCCGTGCTGTTCTCGGTGCAATTCGATaGGGAGCAGAACTTGTTCTGGTACACATGCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: EGHLRAVLGAIR*GAELVLVHMQE Trigger: TTCCTGCATGTGTACCAGAACAAGTTCTGCTCCGCATCGAATTGCACCGAGAACAGCACGGAGGTGGCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS CCA 72 bp | CCGGATTCAGAGTGGGTGGCATTGCAGGACTCTCCTTaGCAGCACTGGCTTGCAAAATGGTATCTTTGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PDSEWVALQDSP*QHWLAKWYLWS Trigger: TGACCAAAGATACCATTTTGCAAGCCAGTGCTGCCAAGGAGAGTCCTGCAATGCCACCCACTCTGAATCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS CCA 72 bp | TGTCAGTTACATTCTGTGTTCCGGATTCAGAGTGGGTaGCATTGCAGGACTCTCCTTGGCAGCACTGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: CQLHSVFRIQSG*HCRTLLGSTGL Trigger: CAAGCCAGTGCTGCCAAGGAGAGTCCTGCAATGCCACCCACTCTGAATCCGGAACACAGAATGTAACTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS CCA 72 bp | TGCATGTCAGTTACATTCTGTGTTCCGGATTCAGAGTaGGTGGCATTGCAGGACTCTCCTTGGCAGCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: CMSVTFCVPDSE*VALQDSPWQHW Trigger: CCAGTGCTGCCAAGGAGAGTCCTGCAATGCCACCCACTCTGAATCCGGAACACAGAATGTAACTGACATGCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS CCA 72 bp | TCGGGTAACAGAGGTGAGGGAAGTGTTGGTGATTGGTaGGATAGTGGTGGTCGAGTTGGTATACTCAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SGNRGEGSVGDW*DSGGRVGILSG Trigger: CCCACTGAGTATACCAACTCGACCACCACTATCCCACCAATCACCAACACTTCCCTCACCTCTGTTACCCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS CAA 72 bp | TCCGGATTCAGAGTGGGTGGCATTGCAGGACTCTCCTaGGCAGCACTGGCTTGCAAAATGGTATCTTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SGFRVGGIAGLS*AALACKMVSLV Trigger: GACCAAAGATACCATTTTGCAAGCCAGTGCTGCCAAGGAGAGTCCTGCAATGCCACCCACTCTGAATCCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS CAA 90 bp | GGGGAAGTTTTGATGCCTGGTCGGGTAACAGAGGTGAGGGAAGTGTaGGTGATTGGTGGGATAGTGGTGGTCGAGTTGGTATACTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: GEVLMPGRVTEVREV*VIGGIVVVELVYSV Trigger: CACTGAGTATACCAACTCGACCACCACTATCCCACCAATCACCAACACTTCCCTCACCTCTGTTACCCGACCAGGCATCAAAACTTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS CCA 72 bp | TTCTCGGTGCAATTCGATGCGGAGCAGAACTTGTTCTaGTACACATGCAGGAACCCTCCTAGAGTGGAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: FSVQFDAEQNLF*YTCRNPPRVEL Trigger: CAACTCCACTCTAGGAGGGTTCCTGCATGTGTACCAGAACAAGTTCTGCTCCGCATCGAATTGCACCGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS GCA 72 bp | CAATTCGATGCGGAGCAGAACTTGTTCTGGTACACATaGAGGAACCCTCCTAGAGTGGAGTTGATAGAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: QFDAEQNLFWYT*RNPPRVELIED Trigger: GTCCTCTATCAACTCCACTCTAGGAGGGTTCCTGCATGTGTACCAGAACAAGTTCTGCTCCGCATCGAATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS CAA 72 bp | TTGATAGAGGACTCCACACAACTGAAGGACTGCTCATaGCATTCAGTGGCCTGGCCATCACAGGTGCTATTG | + |
|
Preference number: 6 (lower is better) Translates to: LIEDSTQLKDCS*HSVAWPSQVLL Trigger: CAATAGCACCTGTGATGGCCAGGCCACTGAATGCAATGAGCAGTCCTTCAGTTGTGTGGAGTCCTCTATCAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS CAA 72 bp | TTCTGGTACACATGCAGGAACCCTCCTAGAGTGGAGTaGATAGAGGACTCCACACAACTGAAGGACTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: FWYTCRNPPRVE*IEDSTQLKDCS Trigger: TGAGCAGTCCTTCAGTTGTGTGGAGTCCTCTATCAACTCCACTCTAGGAGGGTTCCTGCATGTGTACCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS CAA 72 bp | GAAGTGTTGGTGATTGGTGGGATAGTGGTGGTCGAGTaGGTATACTCAGTGGGTTGCGTACATTCAACCGAC | + |
|
Preference number: 6 (lower is better) Translates to: EVLVIGGIVVVE*VYSVGCVHSTD Trigger: GTCGGTTGAATGTACGCAACCCACTGAGTATACCAACTCGACCACCACTATCCCACCAATCACCAACACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS CAA 90 bp | GAGGTGAGGGAAGTGTTGGTGATTGGTGGGATAGTGGTGGTCGAGTaGGTATACTCAGTGGGTTGCGTACATTCAACCGACTTGAAAACA | + |
|
Preference number: 6 (lower is better) Translates to: EVREVLVIGGIVVVE*VYSVGCVHSTDLKT Trigger: TGTTTTCAAGTCGGTTGAATGTACGCAACCCACTGAGTATACCAACTCGACCACCACTATCCCACCAATCACCAACACTTCCCTCACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS CCA 72 bp | GAGTGGGTGGCATTGCAGGACTCTCCTTGGCAGCACTaGCTTGCAAAATGGTATCTTTGGTCATCAAATAGA | + |
|
Preference number: 6 (lower is better) Translates to: EWVALQDSPWQH*LAKWYLWSSNR Trigger: TCTATTTGATGACCAAAGATACCATTTTGCAAGCCAGTGCTGCCAAGGAGAGTCCTGCAATGCCACCCACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS CAA 72 bp | GGGTGGCATTGCAGGACTCTCCTTGGCAGCACTGGCTaGCAAAATGGTATCTTTGGTCATCAAATAGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: GWHCRTLLGSTG*QNGIFGHQIDG Trigger: TCCATCTATTTGATGACCAAAGATACCATTTTGCAAGCCAGTGCTGCCAAGGAGAGTCCTGCAATGCCACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS CAA 90 bp | CACTCTGCCAGAGCCATTTACCATCTCCGCAATGATGAAGACACATaGTTCTCCTTCGTAACACTTTTGGGGTTTCTCCTCGCAGAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: HSARAIYHLRNDEDT*FSFVTLLGFLLAEC Trigger: ACACTCTGCGAGGAGAAACCCCAAAAGTGTTACGAAGGAGAACAATGTGTCTTCATCATTGCGGAGATGGTAAATGGCTCTGGCAGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS CAA 90 bp | CTTGAAAACAAACTCTCCAACTGTTGTGTTCCCAGGGGACAGGAATaGACAAGTAGAGTTGCTGATATCAGAACAGCCCTTCAGCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LENKLSNCCVPRGQE*TSRVADIRTALQLH Trigger: GTGGAGCTGAAGGGCTGTTCTGATATCAGCAACTCTACTTGTCAATTCCTGTCCCCTGGGAACACAACAGTTGGAGAGTTTGTTTTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS CAA 90 bp | GGTGATTGGTGGGATAGTGGTGGTCGAGTTGGTATACTCAGTGGGTaGCGTACATTCAACCGACTTGAAAACAAACTCTCCAACTGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: GDWWDSGGRVGILSG*RTFNRLENKLSNCC Trigger: ACAACAGTTGGAGAGTTTGTTTTCAAGTCGGTTGAATGTACGCAACCCACTGAGTATACCAACTCGACCACCACTATCCCACCAATCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS TCA 72 bp | AACTCTCCAACTGTTGTGTTCCCAGGGGACAGGAATTaGCAAGTAGAGTTGCTGATATCAGAACAGCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: NSPTVVFPGDRN*QVELLISEQPF Trigger: GAAGGGCTGTTCTGATATCAGCAACTCTACTTGTCAATTCCTGTCCCCTGGGAACACAACAGTTGGAGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS TCA 72 bp | TGGTATACTCAGTGGGTTGCGTACATTCAACCGACTTaGAAACAAACTCTCCAACTGTTGTGTTCCCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: WYTQWVAYIQPT*KQTLQLLCSQG Trigger: CCCCTGGGAACACAACAGTTGGAGAGTTTGTTTTCAAGTCGGTTGAATGTACGCAACCCACTGAGTATACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS GCA 72 bp | ACTGCTCATTGCATTCAGTGGCCTGGCCATCACAGGTaGTATTGTACGTATAACACTGTGTACAATTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: TAHCIQWPGHHR*YCTYNTVYNSG Trigger: CCCTGAATTGTACACAGTGTTATACGTACAATAGCACCTGTGATGGCCAGGCCACTGAATGCAATGAGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS CAA 72 bp | AAACTCTCCAACTGTTGTGTTCCCAGGGGACAGGAATaGACAAGTAGAGTTGCTGATATCAGAACAGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: KLSNCCVPRGQE*TSRVADIRTAL Trigger: AAGGGCTGTTCTGATATCAGCAACTCTACTTGTCAATTCCTGTCCCCTGGGAACACAACAGTTGGAGAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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| CDS CAA 72 bp | AGAGCCATTTACCATCTCCGCAATGATGAAGACACATaGTTCTCCTTCGTAACACTTTTGGGGTTTCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RAIYHLRNDEDT*FSFVTLLGFLL Trigger: GAGGAGAAACCCCAAAAGTGTTACGAAGGAGAACAATGTGTCTTCATCATTGCGGAGATGGTAAATGGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013787.11 ENSMUST00000108826.3 |
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