Pregenerated sensors for LYPD6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050447Ensembl transcript IDs: ENSMUST00000053208.14, ENSMUST00000112712.10, ENSMUST00000126337.2, ENSMUST00000128451.8, ENSMUST00000169232.2
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACATGGGTAACTAGTCCTGGACCTTCTACAGGAATGGTCCCTCCTTaGCTTCTTGAGGCTGGGGGTGGTGAGCAAATCCATATTCTTTCA | + |
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Preference number: 1 (lower is better) Translates to: TWVTSPGPSTGMVPP*LLEAGGGEQIHILS Trigger: TGAAAGAATATGGATTTGCTCACCACCCCCAGCCTCAAGAAGCCAAGGAGGGACCATTCCTGTAGAAGGTCCAGGACTAGTTACCCATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR CCA 90 bp | TGTCACTACTGCCAAGCCAATGACTTCATGCATGACTATGGGCCATaGGGAAACCCACAGAGCTCATCTACATTTGGTAGAGAGAAAGGG | + |
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Preference number: 1 (lower is better) Translates to: CHYCQANDFMHDYGP*GNPQSSSTFGREKG Trigger: CCCTTTCTCTCTACCAAATGTAGATGAGCTCTGTGGGTTTCCCCATGGCCCATAGTCATGCATGAAGTCATTGGCTTGGCAGTAGTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR GCA 90 bp | ATCCATAGCTTATTCCTCAGAGGGTCCAGGGCCTCCTGCAGCTCATaGATGGATTCTGAAGCAAGAACCCCAGACATTAATAAATGCAGA | + |
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Preference number: 1 (lower is better) Translates to: IHSLFLRGSRASCSS*MDSEARTPDINKCR Trigger: TCTGCATTTATTAATGTCTGGGGTTCTTGCTTCAGAATCCATGCATGAGCTGCAGGAGGCCCTGGACCCTCTGAGGAATAAGCTATGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR GCA 90 bp | CTGCCAAACTCTTCATTAAGGCTGTGTGATGAAACTTCAATGACTTaGATCAGAGTTTCTGCCGTCGGTTCAGATTTGGTGCCTGAGCGG | + |
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Preference number: 1 (lower is better) Translates to: LPNSSLRLCDETSMT*IRVSAVGSDLVPER Trigger: CCGCTCAGGCACCAAATCTGAACCGACGGCAGAAACTCTGATGCAAGTCATTGAAGTTTCATCACACAGCCTTAATGAAGAGTTTGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR CCA 90 bp | ATAGCTTATTCCTCAGAGGGTCCAGGGCCTCCTGCAGCTCATGCATaGATTCTGAAGCAAGAACCCCAGACATTAATAAATGCAGAACTC | + |
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Preference number: 1 (lower is better) Translates to: IAYSSEGPGPPAAHA*ILKQEPQTLINAEL Trigger: GAGTTCTGCATTTATTAATGTCTGGGGTTCTTGCTTCAGAATCCATGCATGAGCTGCAGGAGGCCCTGGACCCTCTGAGGAATAAGCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR GCA 90 bp | AAGTGCTGGGCACATAAGAGGTGCTTATTACAGGTCTTTCTCTCCTaGTCTCCCATCCGCAGTTATAAGCAAGAAATTGATAAGCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: KCWAHKRCLLQVFLS*SPIRSYKQEIDKPA Trigger: GGCAGGCTTATCAATTTCTTGCTTATAACTGCGGATGGGAGAGCAGGAGAGAAAGACCTGTAATAAGCACCTCTTATGTGCCCAGCACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR TCA 90 bp | GGACTAACCTCCAGAAAGCTTCCTTTTATTCTGAAGTCCTCTCTCTaGCTACATCAGCTATATCTGACTAGAATGCAACACCTGGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: GLTSRKLPFILKSSL*LHQLYLTRMQHLEK Trigger: TTTCTCCAGGTGTTGCATTCTAGTCAGATATAGCTGATGTAGTCAGAGAGAGGACTTCAGAATAAAAGGAAGCTTTCTGGAGGTTAGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR TCA 90 bp | TGGAAAGAGAAGGAATTTTGCTTAGCCATTTCGGAGCCTTCCAAATaGGCTAGGACTAACCTCCAGAAAGCTTCCTTTTATTCTGAAGTC | + |
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Preference number: 1 (lower is better) Translates to: WKEKEFCLAISEPSK*ARTNLQKASFYSEV Trigger: GACTTCAGAATAAAAGGAAGCTTTCTGGAGGTTAGTCCTAGCTCATTTGGAAGGCTCCGAAATGGCTAAGCAAAATTCCTTCTCTTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR TCA 90 bp | ATCTTTCTTGGGCAACATTTCTGGGAAAACAATGAGTCAAACCCTTaGGGCAAATGCACATCTCTTGTCCATAGCACAGTAACATTTTCA | + |
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Preference number: 1 (lower is better) Translates to: IFLGQHFWENNESNP*GKCTSLVHSTVTFS Trigger: TGAAAATGTTACTGTGCTATGGACAAGAGATGTGCATTTGCCTCAAGGGTTTGACTCATTGTTTTCCCAGAAATGTTGCCCAAGAAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGTGCAGCACATGTGTACTGTGGCTGGCACTACTCCCCAGGTGAGGACAGCCGGGTCCAGGGCCTCCTaGAGCTCATGCATGGATTCT | + |
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Preference number: 2 (lower is better) Translates to: CVQHMCTVAGTTPQVRTAGSRAS*SSCMDS Trigger: AGAATCCATGCATGAGCTGCAGGAGGCCCTGGACCC...GGCTGTCCTCACCTGGGGAGTAGTGCCAGCCACAGTACACATGTGCTGCACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGCAGCACATGTGTACTGTGGCTGGCACTACTCCCCAGGTGAGGACAGCCCTGCCAAGTTCCCTGTaGACACACCTCACAGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: CVQHMCTVAGTTPQVRTALPSSL*THLTAL Trigger: CAGGGCTGTGAGGTGTGTCCACAGGGAACTTGGCAG...GGCTGTCCTCACCTGGGGAGTAGTGCCAGCCACAGTACACATGTGCTGCACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGCAGCACATGTGTACTGTGGCTGGCACTACTCCCCAGGTGAGGACAGCCAAGTCACTGTGGTTGTaGAAGGAGACAGCTCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: CVQHMCTVAGTTPQVRTAKSLWL*KETALC Trigger: GCACAGAGCTGTCTCCTTCCACAACCACAGTGACTT...GGCTGTCCTCACCTGGGGAGTAGTGCCAGCCACAGTACACATGTGCTGCACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGAGGACAGCCTATACCTTTGAGAACCCAATCCCTGAAAACCAGCCAGGGTCCTGCTGGTCCAGCTaGAATCCTGGCACTCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: QVRTAYTFENPIPENQPGSCWSS*NPGTQE Trigger: TTCCTGAGTGCCAGGATTCCAGCTGGACCAGCAGGA...CCCTGGCTGGTTTTCAGGGATTGGGTTCTCAAAGGTATAGGCTGTCCTCACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAGAGCTTTCTCTTTAAAGTCACTGTGGTTGTGGAAGGAGACAGCTCTGTGCGGGTCCAGGGCCTCCTaGAGCTCATGCATGGATTCT | + |
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Preference number: 2 (lower is better) Translates to: PRAFSLKSLWLWKETALCGSRAS*SSCMDS Trigger: AGAATCCATGCATGAGCTGCAGGAGGCCCTGGACCC...GCACAGAGCTGTCTCCTTCCACAACCACAGTGACTTTAAAGAGAAAGCTCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR CCA 90 bp | GCAACACCTGGAGAAAATAATCCTGCTGGTCCAGCTGGAATCCTGGCACTCAGGGGCTGCGATGACGTCTaGGGTTGCTGTGATTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: ATPGENNPAGPAGILALRGCDDV*GCCDCV Trigger: AACACAATCACAGCAACCCCAGACGTCATCGCAGCC...CCTGAGTGCCAGGATTCCAGCTGGACCAGCAGGATTATTTTCTCCAGGTGTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGTGAGGACAGCCTATACCTTTGAGAACCCAATCCCTGAAAACCAGCCAGGGGTGATGGCCTCCACCTaGATCTTTCTTGGGCAACAT | + |
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Preference number: 2 (lower is better) Translates to: QVRTAYTFENPIPENQPGVMAST*IFLGQH Trigger: ATGTTGCCCAAGAAAGATTCAGGTGGAGGCCATCAC...CCCTGGCTGGTTTTCAGGGATTGGGTTCTCAAAGGTATAGGCTGTCCTCACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCTTCAAGACATAGCTCTGCCAAGTTCCCTGTGGACACACCTCACAGCCCTGGATGACGTCTGGGGTTaGTGTGATTGTGTTGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: PLQDIALPSSLWTHLTALDDVWG*CDCVVS Trigger: TGACACAACACAATCACAGCAACCCCAGACGTCATC...CAGGGCTGTGAGGTGTGTCCACAGGGAACTTGGCAGAGCTATGTCTTGAAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR GCA 90 bp | CACACCTCACAGCCCTGCAAAGACTATCACACCAGTGATGGCCTCCACCTGAATGCCTCCTGCAGCTCATaGATGGATTCTGAAGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: HTSQPCKDYHTSDGLHLNASCSS*MDSEAR Trigger: TCTTGCTTCAGAATCCATGCATGAGCTGCAGGAGGC...ATTCAGGTGGAGGCCATCACTGGTGTGATAGTCTTTGCAGGGCTGTGAGGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR GCA 90 bp | GCAACACCTGGAGAAAATAATCCTGCTGGTCCAGCTGGAATCCTGGCACTCAGGGCCTCCTGCAGCTCATaGATGGATTCTGAAGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: ATPGENNPAGPAGILALRASCSS*MDSEAR Trigger: TCTTGCTTCAGAATCCATGCATGAGCTGCAGGAGGC...CCTGAGTGCCAGGATTCCAGCTGGACCAGCAGGATTATTTTCTCCAGGTGTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGAGGACAGCCTATACCTTTGAGAACCCAATCCCTGAAAACCAGCCAGGGCCTGCAGCTCATGCATaGATTCTGAAGCAAGAACCC | + |
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Preference number: 2 (lower is better) Translates to: QVRTAYTFENPIPENQPGPAAHA*ILKQEP Trigger: GGGTTCTTGCTTCAGAATCCATGCATGAGCTGCAGG...CCCTGGCTGGTTTTCAGGGATTGGGTTCTCAAAGGTATAGGCTGTCCTCACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR CCA 90 bp | GGCACTACTCCCCAGGTGAGGACAGCCTATACCTTTGAGAACCCAATCCCTGAAAAGTCACTGTGGTTGTaGAAGGAGACAGCTCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: GTTPQVRTAYTFENPIPEKSLWL*KETALC Trigger: GCACAGAGCTGTCTCCTTCCACAACCACAGTGACTT...TTCAGGGATTGGGTTCTCAAAGGTATAGGCTGTCCTCACCTGGGGAGTAGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR GCA 90 bp | GGCACTACTCCCCAGGTGAGGACAGCCTATACCTTTGAGAACCCAATCCCTGAAAAGTGCTTAGCAAAGTaGTGGGCACATAAGAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: GTTPQVRTAYTFENPIPEKCLAK*WAHKRC Trigger: GCACCTCTTATGTGCCCAGCACTTTGCTAAGCACTT...TTCAGGGATTGGGTTCTCAAAGGTATAGGCTGTCCTCACCTGGGGAGTAGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR CCA 90 bp | CACACCTCACAGCCCTGCAAAGACTATCACACCAGTGATGGCCTCCACCTGAATGTCCAGCTGGAATCCTaGCACTCAGGAAGCATAATT | + |
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Preference number: 2 (lower is better) Translates to: HTSQPCKDYHTSDGLHLNVQLES*HSGSII Trigger: AATTATGCTTCCTGAGTGCCAGGATTCCAGCTGGAC...ATTCAGGTGGAGGCCATCACTGGTGTGATAGTCTTTGCAGGGCTGTGAGGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR TCA 90 bp | CACACCTCACAGCCCTGCAAAGACTATCACACCAGTGATGGCCTCCACCTGAATCTGAAGTCCTCTCTCTaGCTACATCAGCTATATCTG | + |
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Preference number: 2 (lower is better) Translates to: HTSQPCKDYHTSDGLHLNLKSSL*LHQLYL Trigger: CAGATATAGCTGATGTAGTCAGAGAGAGGACTTCAG...ATTCAGGTGGAGGCCATCACTGGTGTGATAGTCTTTGCAGGGCTGTGAGGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR GCA 90 bp | GAGAACCCAATCCCTGAAAACCAGCCAGGGAGGCTCTTGTGTGGTCAGTCCCTTCCTAACTATGTAAAGTaGTTAGCAAAGTGCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: ENPIPENQPGRLLCGQSLPNYVK*LAKCWA Trigger: TGCCCAGCACTTTGCTAAGCACTTTACATAGTTAGG...AAGGGACTGACCACACAAGAGCCTCCCTGGCTGGTTTTCAGGGATTGGGTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCCTGCATCCATAGCTTATTCCTCAGAGGGTCCAGGGCCTCCTGCAGCTCATTGCAGAACTCTTTCTTaGAGTGAAATCACAGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: PPASIAYSSEGPGPPAAHCRTLS*SEITGL Trigger: CAAACCTGTGATTTCACTCCAAGAAAGAGTTCTGCA...ATGAGCTGCAGGAGGCCCTGGACCCTCTGAGGAATAAGCTATGGATGCAGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAACCCAATCCCTGAAAACCAGCCAGGGAGGCTCTTGTGTGGTCAGTCCCTTTCTTTAAAGTCACTGTaGTTGTGGAAGGAGACAGCT | + |
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Preference number: 2 (lower is better) Translates to: ENPIPENQPGRLLCGQSLSLKSL*LWKETA Trigger: AGCTGTCTCCTTCCACAACCACAGTGACTTTAAAGA...AAGGGACTGACCACACAAGAGCCTCCCTGGCTGGTTTTCAGGGATTGGGTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR CAA 90 bp | TATACCTTTGAGAACCCAATCCCTGAAAACCAGCCAGGGAGGCTCTaGTGTGGTCAGTCCCTTGTCTCTTGTTCAGATTGCATGCAGACT | + |
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Preference number: 2 (lower is better) Translates to: YTFENPIPENQPGRL*CGQSLVSCSDCMQT Trigger: AGTCTGCATGCAATCTGAACAAGAGACAAGGGACTGACCACACAAGAGCCTCCCTGGCTGGTTTTCAGGGATTGGGTTCTCAAAGGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAACCCAATCCCTGAAAACCAGCCAGGGAGGCTCTTGTGTGGTCAGTCCCTTATGCAAATGTCATCCTaGGAAGCAGGATATGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: ENPIPENQPGRLLCGQSLMQMSS*EAGYVL Trigger: TAGAACATATCCTGCTTCTCAGGATGACATTTGCAT...AAGGGACTGACCACACAAGAGCCTCCCTGGCTGGTTTTCAGGGATTGGGTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR GCA 90 bp | ATAATCCTGCTGGTCCAGCTGGAATCCTGGCACTCAGGAAGCATAATTAGCAACGCCTCCTGCAGCTCATaGATGGATTCTGAAGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: IILLVQLESWHSGSIISNASCSS*MDSEAR Trigger: TCTTGCTTCAGAATCCATGCATGAGCTGCAGGAGGC...GTTGCTAATTATGCTTCCTGAGTGCCAGGATTCCAGCTGGACCAGCAGGATTAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR GCA 90 bp | CACACCTCACAGCCCTGCAAAGACTATCACACCAGTGATGGCCTCCACCTGAATAAGAACGATACCTCCTaGATCCATAGCTTATTCCTC | + |
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Preference number: 2 (lower is better) Translates to: HTSQPCKDYHTSDGLHLNKNDTS*IHSLFL Trigger: GAGGAATAAGCTATGGATGCAGGAGGTATCGTTCTT...ATTCAGGTGGAGGCCATCACTGGTGTGATAGTCTTTGCAGGGCTGTGAGGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR GCA 90 bp | GGCACTACTCCCCAGGTGAGGACAGCCTATACCTTTGAGAACCCAATCCCTGAAGAAACTTCAATGACTTaGATCAGAGTTTCTGCCGTC | + |
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Preference number: 2 (lower is better) Translates to: GTTPQVRTAYTFENPIPEETSMT*IRVSAV Trigger: GACGGCAGAAACTCTGATGCAAGTCATTGAAGTTTC...TTCAGGGATTGGGTTCTCAAAGGTATAGGCTGTCCTCACCTGGGGAGTAGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTGTGGTCAGTCCCTTGTCTCTTGTTCAGATTGCATGCAGACTTGGCAAATGGGCTGCGATGACGTCTaGGGTTGCTGTGATTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: LCGQSLVSCSDCMQTWQMGCDDV*GCCDCV Trigger: AACACAATCACAGCAACCCCAGACGTCATCGCAGCC...CATTTGCCAAGTCTGCATGCAATCTGAACAAGAGACAAGGGACTGACCACACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR CCA 90 bp | ATAATCCTGCTGGTCCAGCTGGAATCCTGGCACTCAGGAAGCATAATTAGCAACCCTGCAGCTCATGCATaGATTCTGAAGCAAGAACCC | + |
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Preference number: 2 (lower is better) Translates to: IILLVQLESWHSGSIISNPAAHA*ILKQEP Trigger: GGGTTCTTGCTTCAGAATCCATGCATGAGCTGCAGG...GTTGCTAATTATGCTTCCTGAGTGCCAGGATTCCAGCTGGACCAGCAGGATTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCTTCAAGACATAGCTCTGCCAAGTTCCCTGTGGACACACCTCACAGCCCTGAACTCTTTCTTGGAGTaGAATCACAGGTTTGTAGTA | + |
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Preference number: 2 (lower is better) Translates to: PLQDIALPSSLWTHLTALNSFLE*NHRFVV Trigger: TACTACAAACCTGTGATTTCACTCCAAGAAAGAGTT...CAGGGCTGTGAGGTGTGTCCACAGGGAACTTGGCAGAGCTATGTCTTGAAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR TCA 90 bp | GCAACACCTGGAGAAAATAATCCTGCTGGTCCAGCTGGAATCCTGGCACTCAGGTCTTTACTCTTTTCCTaGAAAGAACGATACCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: ATPGENNPAGPAGILALRSLLFS*KERYLL Trigger: CAGGAGGTATCGTTCTTTTCAGGAAAAGAGTAAAGA...CCTGAGTGCCAGGATTCCAGCTGGACCAGCAGGATTATTTTCTCCAGGTGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR TCA 90 bp | TCATTGACCTCTTCAAGACATAGCTCTGCCAAGTTCCCTGTGGACACACCTCACCTGAAGTCCTCTCTCTaGCTACATCAGCTATATCTG | + |
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Preference number: 2 (lower is better) Translates to: SLTSSRHSSAKFPVDTPHLKSSL*LHQLYL Trigger: CAGATATAGCTGATGTAGTCAGAGAGAGGACTTCAG...GTGAGGTGTGTCCACAGGGAACTTGGCAGAGCTATGTCTTGAAGAGGTCAATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAGAGCTTTCTCTTTAAAGTCACTGTGGTTGTGGAAGGAGACAGCTCTGTGCGTGTTGTGTCACTACTaGCAAGCCAATGACTTCATG | + |
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Preference number: 2 (lower is better) Translates to: PRAFSLKSLWLWKETALCVLCHY*QANDFM Trigger: CATGAAGTCATTGGCTTGGCAGTAGTGACACAACAC...GCACAGAGCTGTCTCCTTCCACAACCACAGTGACTTTAAAGAGAAAGCTCTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR GCA 90 bp | TCATTGACCTCTTCAAGACATAGCTCTGCCAAGTTCCCTGTGGACACACCTCACGTGTTGTGTCACTACTaGCAAGCCAATGACTTCATG | + |
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Preference number: 2 (lower is better) Translates to: SLTSSRHSSAKFPVDTPHVLCHY*QANDFM Trigger: CATGAAGTCATTGGCTTGGCAGTAGTGACACAACAC...GTGAGGTGTGTCCACAGGGAACTTGGCAGAGCTATGTCTTGAAGAGGTCAATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR CCA 90 bp | TTAACATCATTGACCTCTTCAAGACATAGCTCTGCCAAGTTCCCTGTGGACACACATGACTATGGGCCATaGGGAAACCCACAGAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: LTSLTSSRHSSAKFPVDTHDYGP*GNPQSS Trigger: TGAGCTCTGTGGGTTTCCCCATGGCCCATAGTCATG...TGTGTCCACAGGGAACTTGGCAGAGCTATGTCTTGAAGAGGTCAATGATGTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGAGGACAGCCTATACCTTTGAGAACCCAATCCCTGAAAACCAGCCAGGGTGCAGAACTCTTTCTTaGAGTGAAATCACAGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: QVRTAYTFENPIPENQPGCRTLS*SEITGL Trigger: CAAACCTGTGATTTCACTCCAAGAAAGAGTTCTGCA...CCCTGGCTGGTTTTCAGGGATTGGGTTCTCAAAGGTATAGGCTGTCCTCACCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR CCA 90 bp | CACACCTCACAGCCCTGCAAAGACTATCACACCAGTGATGGCCTCCACCTGAATTGCAGAACTCTTTCTTaGAGTGAAATCACAGGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: HTSQPCKDYHTSDGLHLNCRTLS*SEITGL Trigger: CAAACCTGTGATTTCACTCCAAGAAAGAGTTCTGCA...ATTCAGGTGGAGGCCATCACTGGTGTGATAGTCTTTGCAGGGCTGTGAGGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR TCA 90 bp | TTAACATCATTGACCTCTTCAAGACATAGCTCTGCCAAGTTCCCTGTGGACACAGTGATGGCCTCCACCTaGATCTTTCTTGGGCAACAT | + |
|
Preference number: 2 (lower is better) Translates to: LTSLTSSRHSSAKFPVDTVMAST*IFLGQH Trigger: ATGTTGCCCAAGAAAGATTCAGGTGGAGGCCATCAC...TGTGTCCACAGGGAACTTGGCAGAGCTATGTCTTGAAGAGGTCAATGATGTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGAACCCAATCCCTGAAAACCAGCCAGGGAGGCTCTTGTGTGGTCAGTCCCTTCCAGACATTAATAAATaGAGAACTCTTTCTTGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: ENPIPENQPGRLLCGQSLPDINK*RTLSWS Trigger: ACTCCAAGAAAGAGTTCTGCATTTATTAATGTCTGG...AAGGGACTGACCACACAAGAGCCTCCCTGGCTGGTTTTCAGGGATTGGGTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR GCA 90 bp | CACACCTCACAGCCCTGCAAAGACTATCACACCAGTGATGGCCTCCACCTGAATACCCTAGCACAAGTGTaGTCTTATCTTATTGATCTA | + |
|
Preference number: 2 (lower is better) Translates to: HTSQPCKDYHTSDGLHLNTLAQV*SYLIDL Trigger: TAGATCAATAAGATAAGAGCACACTTGTGCTAGGGT...ATTCAGGTGGAGGCCATCACTGGTGTGATAGTCTTTGCAGGGCTGTGAGGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTGATGAAACTTCAATGACTTGCATCAGAGTTTCTGCCGTCGGTTCAGATTTGCATGACTATGGGCCATaGGGAAACCCACAGAGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: CDETSMTCIRVSAVGSDLHDYGP*GNPQSS Trigger: TGAGCTCTGTGGGTTTCCCCATGGCCCATAGTCATG...CAAATCTGAACCGACGGCAGAAACTCTGATGCAAGTCATTGAAGTTTCATCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR CCA 90 bp | ACATGCAAATGTCATCCTGAGAAGCAGGATATGTTCTACATGATAAGATGGGGATCCTGCTGGTCCAGCTaGAATCCTGGCACTCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: TCKCHPEKQDMFYMIRWGSCWSS*NPGTQE Trigger: TTCCTGAGTGCCAGGATTCCAGCTGGACCAGCAGGA...TCCCCATCTTATCATGTAGAACATATCCTGCTTCTCAGGATGACATTTGCATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGGTGAGGACAGCCTATACCTTTGAGAACCCAATCCCTGAAAACCAGCCAGGGCCAGACATTAATAAATaGAGAACTCTTTCTTGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: QVRTAYTFENPIPENQPGPDINK*RTLSWS Trigger: ACTCCAAGAAAGAGTTCTGCATTTATTAATGTCTGG...CCCTGGCTGGTTTTCAGGGATTGGGTTCTCAAAGGTATAGGCTGTCCTCACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGGACACATGCAAATGTCATCCTGAGAAGCAGGATATGTTCTACATGATAAGACACACCTCACAGCCCTaGAAAGACTATCACACCAGT | + |
|
Preference number: 2 (lower is better) Translates to: GDTCKCHPEKQDMFYMIRHTSQP*KDYHTS Trigger: ACTGGTGTGATAGTCTTTGCAGGGCTGTGAGGTGTG...TCTTATCATGTAGAACATATCCTGCTTCTCAGGATGACATTTGCATGTGTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR TCA 90 bp | TCATTGACCTCTTCAAGACATAGCTCTGCCAAGTTCCCTGTGGACACACCTCACCTGGGGAAATTAAATTaGGCAAAGTTCTTTCAACTC | + |
|
Preference number: 2 (lower is better) Translates to: SLTSSRHSSAKFPVDTPHLGKLN*AKFFQL Trigger: GAGTTGAAAGAACTTTGCTCAATTTAATTTCCCCAG...GTGAGGTGTGTCCACAGGGAACTTGGCAGAGCTATGTCTTGAAGAGGTCAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTTTAGATGCAAGATCAACTATCTCCTCTCTTTACCAGAGGATAAATAAGGAAGGGTCCAGGGCCTCCTaGAGCTCATGCATGGATTCT | + |
|
Preference number: 2 (lower is better) Translates to: SLDARSTISSLYQRINKEGSRAS*SSCMDS Trigger: AGAATCCATGCATGAGCTGCAGGAGGCCCTGGACCC...TTCCTTATTTATCCTCTGGTAAAGAGAGGAGATAGTTGATCTTGCATCTAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR GCA 90 bp | ACATGCAAATGTCATCCTGAGAAGCAGGATATGTTCTACATGATAAGATGGGGACAGGTCTTTCTCTCCTaGTCTCCCATCCGCAGTTAT | + |
|
Preference number: 2 (lower is better) Translates to: TCKCHPEKQDMFYMIRWGQVFLS*SPIRSY Trigger: ATAACTGCGGATGGGAGAGCAGGAGAGAAAGACCTG...TCCCCATCTTATCATGTAGAACATATCCTGCTTCTCAGGATGACATTTGCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGTGTGGTCAGTCCCTTGTCTCTTGTTCAGATTGCATGCAGACTTGGCAAATGCCTAACTATGTAAAGTaGTTAGCAAAGTGCTGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: LCGQSLVSCSDCMQTWQMPNYVK*LAKCWA Trigger: TGCCCAGCACTTTGCTAAGCACTTTACATAGTTAGG...CATTTGCCAAGTCTGCATGCAATCTGAACAAGAGACAAGGGACTGACCACACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR CAA 90 bp | AGGTCTTTCTCTCCTGCTCTCCCATCCGCAGTTATAAGCAAGAAATaGATAAGCCTGCCAAACTCTTCATTAAGGCTGTGTGATGAAACT | + |
|
Preference number: 2 (lower is better) Translates to: RSFSPALPSAVISKK*ISLPNSSLRLCDET Trigger: AGTTTCATCACACAGCCTTAATGAAGAGTTTGGCAGGCTTATCAATTTCTTGCTTATAACTGCGGATGGGAGAGCAGGAGAGAAAGACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR TCA 90 bp | ATAATCCTGCTGGTCCAGCTGGAATCCTGGCACTCAGGAAGCATAATTAGCAACAACTCTTTCTTGGAGTaGAATCACAGGTTTGTAGTA | + |
|
Preference number: 2 (lower is better) Translates to: IILLVQLESWHSGSIISNNSFLE*NHRFVV Trigger: TACTACAAACCTGTGATTTCACTCCAAGAAAGAGTT...GTTGCTAATTATGCTTCCTGAGTGCCAGGATTCCAGCTGGACCAGCAGGATTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGGACACATGCAAATGTCATCCTGAGAAGCAGGATATGTTCTACATGATAAGAGTGTTGTGTCACTACTaGCAAGCCAATGACTTCATG | + |
|
Preference number: 2 (lower is better) Translates to: GDTCKCHPEKQDMFYMIRVLCHY*QANDFM Trigger: CATGAAGTCATTGGCTTGGCAGTAGTGACACAACAC...TCTTATCATGTAGAACATATCCTGCTTCTCAGGATGACATTTGCATGTGTCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTGCAGGTGTGATTGCAATTAAGTCAATGGTTCTTTACTCTTTTCCTGAAAAGCCTGCAGCTCATGCATaGATTCTGAAGCAAGAACCC | + |
|
Preference number: 2 (lower is better) Translates to: GAGVIAIKSMVLYSFPEKPAAHA*ILKQEP Trigger: GGGTTCTTGCTTCAGAATCCATGCATGAGCTGCAGG...CTTTTCAGGAAAAGAGTAAAGAACCATTGACTTAATTGCAATCACACCTGCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTTAGATGCAAGATCAACTATCTCCTCTCTTTACCAGAGGATAAATAAGGAATCCTGCTGGTCCAGCTaGAATCCTGGCACTCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: SLDARSTISSLYQRINKESCWSS*NPGTQE Trigger: TTCCTGAGTGCCAGGATTCCAGCTGGACCAGCAGGA...TTCCTTATTTATCCTCTGGTAAAGAGAGGAGATAGTTGATCTTGCATCTAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGGACACATGCAAATGTCATCCTGAGAAGCAGGATATGTTCTACATGATAAGATACATCAGCTATATCTaGCTAGAATGCAACACCTGG | + |
|
Preference number: 2 (lower is better) Translates to: GDTCKCHPEKQDMFYMIRYISYI*LECNTW Trigger: CCAGGTGTTGCATTCTAGTCAGATATAGCTGATGTA...TCTTATCATGTAGAACATATCCTGCTTCTCAGGATGACATTTGCATGTGTCCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGGACACATGCAAATGTCATCCTGAGAAGCAGGATATGTTCTACATGATAAGAGAAACTTCAATGACTTaGATCAGAGTTTCTGCCGTC | + |
|
Preference number: 2 (lower is better) Translates to: GDTCKCHPEKQDMFYMIRETSMT*IRVSAV Trigger: GACGGCAGAAACTCTGATGCAAGTCATTGAAGTTTC...TCTTATCATGTAGAACATATCCTGCTTCTCAGGATGACATTTGCATGTGTCCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGGACACATGCAAATGTCATCCTGAGAAGCAGGATATGTTCTACATGATAAGATCTTTAAAGTCACTGTaGTTGTGGAAGGAGACAGCT | + |
|
Preference number: 2 (lower is better) Translates to: GDTCKCHPEKQDMFYMIRSLKSL*LWKETA Trigger: AGCTGTCTCCTTCCACAACCACAGTGACTTTAAAGA...TCTTATCATGTAGAACATATCCTGCTTCTCAGGATGACATTTGCATGTGTCCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR CAA 90 bp | TTTAAGCTAAAGTTCCCTGTGCAGGACAGATATATTTTAACATCATaGACCTCTTCAAGACATAGCTCTGCCAAGTTCCCTGTGGACACA | + |
|
Preference number: 2 (lower is better) Translates to: FKLKFPVQDRYILTS*TSSRHSSAKFPVDT Trigger: TGTGTCCACAGGGAACTTGGCAGAGCTATGTCTTGAAGAGGTCAATGATGTTAAAATATATCTGTCCTGCACAGGGAACTTTAGCTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGGACACATGCAAATGTCATCCTGAGAAGCAGGATATGTTCTACATGATAAGATCTTTACTCTTTTCCTaGAAAGAACGATACCTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: GDTCKCHPEKQDMFYMIRSLLFS*KERYLL Trigger: CAGGAGGTATCGTTCTTTTCAGGAAAAGAGTAAAGA...TCTTATCATGTAGAACATATCCTGCTTCTCAGGATGACATTTGCATGTGTCCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR TCA 90 bp | ACATGCAAATGTCATCCTGAGAAGCAGGATATGTTCTACATGATAAGATGGGGATACATCAGCTATATCTaGCTAGAATGCAACACCTGG | + |
|
Preference number: 2 (lower is better) Translates to: TCKCHPEKQDMFYMIRWGYISYI*LECNTW Trigger: CCAGGTGTTGCATTCTAGTCAGATATAGCTGATGTA...TCCCCATCTTATCATGTAGAACATATCCTGCTTCTCAGGATGACATTTGCATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGTGTGGTCAGTCCCTTGTCTCTTGTTCAGATTGCATGCAGACTTGGCAAATGCCAGACATTAATAAATaGAGAACTCTTTCTTGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: LCGQSLVSCSDCMQTWQMPDINK*RTLSWS Trigger: ACTCCAAGAAAGAGTTCTGCATTTATTAATGTCTGG...CATTTGCCAAGTCTGCATGCAATCTGAACAAGAGACAAGGGACTGACCACACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR GCA 90 bp | TTGTGTGGTCAGTCCCTTGTCTCTTGTTCAGATTGCATGCAGACTTGGCAAATGTATAGCATCTTTAGATaGAAGATCAACTATCTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: LCGQSLVSCSDCMQTWQMYSIFR*KINYLL Trigger: GAGGAGATAGTTGATCTTGCATCTAAAGATGCTATA...CATTTGCCAAGTCTGCATGCAATCTGAACAAGAGACAAGGGACTGACCACACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTCTTCAAAAACAGTAGCAGAGAGAAACAAAACGTACTCCTTAGACCACCATAGCTTCCTTTTATTCTaGAGTCCTCTCTCTGACTAC | + |
|
Preference number: 2 (lower is better) Translates to: SSSKTVAERNKTYSLDHHSFLLF*SPLSDY Trigger: GTAGTCAGAGAGAGGACTTCAGAATAAAAGGAAGCT...ATGGTGGTCTAAGGAGTACGTTTTGTTTCTCTCTGCTACTGTTTTTGAAGAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTTAGATGCAAGATCAACTATCTCCTCTCTTTACCAGAGGATAAATAAGGAAGATGACGTCTGGGGTTaGTGTGATTGTGTTGTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: SLDARSTISSLYQRINKEDDVWG*CDCVVS Trigger: TGACACAACACAATCACAGCAACCCCAGACGTCATC...TTCCTTATTTATCCTCTGGTAAAGAGAGGAGATAGTTGATCTTGCATCTAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR CAA 90 bp | GAGTCAAGGCCAATCTGCCCAGTTATAAGAAGGGATAACATTATCTaGTGGATGCTAATTTCATCAAGTTGGAGGAACTCTTTCTCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: ESRPICPVIRRDNII*WMLISSSWRNSFSF Trigger: AAAAGAGAAAGAGTTCCTCCAACTTGATGAAATTAGCATCCACAAGATAATGTTATCCCTTCTTATAACTGGGCAGATTGGCCTTGACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTTAGATGCAAGATCAACTATCTCCTCTCTTTACCAGAGGATAAATAAGGAACTGAAGTCCTCTCTCTaGCTACATCAGCTATATCTG | + |
|
Preference number: 2 (lower is better) Translates to: SLDARSTISSLYQRINKELKSSL*LHQLYL Trigger: CAGATATAGCTGATGTAGTCAGAGAGAGGACTTCAG...TTCCTTATTTATCCTCTGGTAAAGAGAGGAGATAGTTGATCTTGCATCTAAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR GCA 90 bp | ACATGCAAATGTCATCCTGAGAAGCAGGATATGTTCTACATGATAAGATGGGGAACCCTAGCACAAGTGTaGTCTTATCTTATTGATCTA | + |
|
Preference number: 2 (lower is better) Translates to: TCKCHPEKQDMFYMIRWGTLAQV*SYLIDL Trigger: TAGATCAATAAGATAAGAGCACACTTGTGCTAGGGT...TCCCCATCTTATCATGTAGAACATATCCTGCTTCTCAGGATGACATTTGCATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTTCTTCAAAAACAGTAGCAGAGAGAAACAAAACGTACTCCTTAGACCACCATAACTCTTTCTTGGAGTaGAATCACAGGTTTGTAGTA | + |
|
Preference number: 2 (lower is better) Translates to: SSSKTVAERNKTYSLDHHNSFLE*NHRFVV Trigger: TACTACAAACCTGTGATTTCACTCCAAGAAAGAGTT...ATGGTGGTCTAAGGAGTACGTTTTGTTTCTCTCTGCTACTGTTTTTGAAGAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTTTAGATGCAAGATCAACTATCTCCTCTCTTTACCAGAGGATAAATAAGGAACTGGAAATGACAGCATaGAAGCAATGCTTGTTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: SLDARSTISSLYQRINKELEMTA*KQCLFF Trigger: GAAGAACAAGCATTGCTTCCATGCTGTCATTTCCAG...TTCCTTATTTATCCTCTGGTAAAGAGAGGAGATAGTTGATCTTGCATCTAAAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTTTAGATGCAAGATCAACTATCTCCTCTCTTTACCAGAGGATAAATAAGGAATCTTTAAAGTCACTGTaGTTGTGGAAGGAGACAGCT | + |
|
Preference number: 2 (lower is better) Translates to: SLDARSTISSLYQRINKESLKSL*LWKETA Trigger: AGCTGTCTCCTTCCACAACCACAGTGACTTTAAAGA...TTCCTTATTTATCCTCTGGTAAAGAGAGGAGATAGTTGATCTTGCATCTAAAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR GCA 72 bp | CTCTGCCAAGTTCCCTGTGGACACACCTCACAGCCCTaGAAAGACTATCACACCAGTGATGGCCTCCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: LCQVPCGHTSQP*KDYHTSDGLHL Trigger: CAGGTGGAGGCCATCACTGGTGTGATAGTCTTTGCAGGGCTGTGAGGTGTGTCCACAGGGAACTTGGCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR TCA 72 bp | AGCACATGTGTACTGTGGCTGGCACTACTCCCCAGGTaGGGACAGCCTATACCTTTGAGAACCCAATCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: STCVLWLALLPR*GQPIPLRTQSL Trigger: CAGGGATTGGGTTCTCAAAGGTATAGGCTGTCCTCACCTGGGGAGTAGTGCCAGCCACAGTACACATGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR GCA 72 bp | ATCCATAGCTTATTCCTCAGAGGGTCCAGGGCCTCCTaGAGCTCATGCATGGATTCTGAAGCAAGAACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: IHSLFLRGSRAS*SSCMDSEARTP Trigger: TGGGGTTCTTGCTTCAGAATCCATGCATGAGCTGCAGGAGGCCCTGGACCCTCTGAGGAATAAGCTATGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCACTACTCCCCAGGTGAGGACAGCCTATACCTTTGAGAACCCAATCCCTGAAGTTGCTGTGATTGTGTaGTGTCACTACTGCCAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GTTPQVRTAYTFENPIPEVAVIV*CHYCQA Trigger: GGCTTGGCAGTAGTGACACAACACAATCACAGCAAC...TTCAGGGATTGGGTTCTCAAAGGTATAGGCTGTCCTCACCTGGGGAGTAGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR CAA 90 bp | CACACCTCACAGCCCTGCAAAGACTATCACACCAGTGATGGCCTCCACCTGAATGTTGCTGTGATTGTGTaGTGTCACTACTGCCAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: HTSQPCKDYHTSDGLHLNVAVIV*CHYCQA Trigger: GGCTTGGCAGTAGTGACACAACACAATCACAGCAAC...ATTCAGGTGGAGGCCATCACTGGTGTGATAGTCTTTGCAGGGCTGTGAGGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAACACCTGGAGAAAATAATCCTGCTGGTCCAGCTGGAATCCTGGCACTCAGGGTTGCTGTGATTGTGTaGTGTCACTACTGCCAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: ATPGENNPAGPAGILALRVAVIV*CHYCQA Trigger: GGCTTGGCAGTAGTGACACAACACAATCACAGCAAC...CCTGAGTGCCAGGATTCCAGCTGGACCAGCAGGATTATTTTCTCCAGGTGTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR GCA 72 bp | TTATTCCTCAGAGGGTCCAGGGCCTCCTGCAGCTCATaGATGGATTCTGAAGCAAGAACCCCAGACATTAAT | + |
|
Preference number: 3 (lower is better) Translates to: LFLRGSRASCSS*MDSEARTPDIN Trigger: ATTAATGTCTGGGGTTCTTGCTTCAGAATCCATGCATGAGCTGCAGGAGGCCCTGGACCCTCTGAGGAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR CCA 72 bp | TCCTCAGAGGGTCCAGGGCCTCCTGCAGCTCATGCATaGATTCTGAAGCAAGAACCCCAGACATTAATAAAT | + |
|
Preference number: 3 (lower is better) Translates to: SSEGPGPPAAHA*ILKQEPQTLIN Trigger: ATTTATTAATGTCTGGGGTTCTTGCTTCAGAATCCATGCATGAGCTGCAGGAGGCCCTGGACCCTCTGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATTGACCTCTTCAAGACATAGCTCTGCCAAGTTCCCTGTGGACACACCTCACTTAAAGTCACTGTGGTaGTGGAAGGAGACAGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SLTSSRHSSAKFPVDTPHLKSLW*WKETAL Trigger: CAGAGCTGTCTCCTTCCACAACCACAGTGACTTTAA...GTGAGGTGTGTCCACAGGGAACTTGGCAGAGCTATGTCTTGAAGAGGTCAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR CCA 72 bp | TGCCAAGCCAATGACTTCATGCATGACTATGGGCCATaGGGAAACCCACAGAGCTCATCTACATTTGGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: CQANDFMHDYGP*GNPQSSSTFGR Trigger: TCTACCAAATGTAGATGAGCTCTGTGGGTTTCCCCATGGCCCATAGTCATGCATGAAGTCATTGGCTTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGTGAGGACAGCCTATACCTTTGAGAACCCAATCCCTGAAAACCAGCCAGGGGTTATAAGCAAGAAATaGATAAGCCTGCCAAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: QVRTAYTFENPIPENQPGVISKK*ISLPNS Trigger: AGAGTTTGGCAGGCTTATCAATTTCTTGCTTATAAC...CCCTGGCTGGTTTTCAGGGATTGGGTTCTCAAAGGTATAGGCTGTCCTCACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR TCA 72 bp | CTGGAATCCTGGCACTCAGGAAGCATAATTAGCAACTaGGTCAAGGCCAATCTGCCCAGTTATAAGAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LESWHSGSIISN*VKANLPSYKKG Trigger: TCCCTTCTTATAACTGGGCAGATTGGCCTTGACTCAGTTGCTAATTATGCTTCCTGAGTGCCAGGATTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR GCA 72 bp | GTTCTTTACTCTTTTCCTGAAAAGAACGATACCTCCTaGATCCATAGCTTATTCCTCAGAGGGTCCAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: VLYSFPEKNDTS*IHSLFLRGSRA Trigger: GGCCCTGGACCCTCTGAGGAATAAGCTATGGATGCAGGAGGTATCGTTCTTTTCAGGAAAAGAGTAAAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAACATCATTGACCTCTTCAAGACATAGCTCTGCCAAGTTCCCTGTGGACACATTAAAGTCACTGTGGTaGTGGAAGGAGACAGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LTSLTSSRHSSAKFPVDTLKSLW*WKETAL Trigger: CAGAGCTGTCTCCTTCCACAACCACAGTGACTTTAA...TGTGTCCACAGGGAACTTGGCAGAGCTATGTCTTGAAGAGGTCAATGATGTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR GCA 72 bp | CTCTTGTGTGGTCAGTCCCTTGTCTCTTGTTCAGATTaGATGCAGACTTGGCAAATGTCAGTAGAATGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LLCGQSLVSCSD*MQTWQMSVECD Trigger: GTCACATTCTACTGACATTTGCCAAGTCTGCATGCAATCTGAACAAGAGACAAGGGACTGACCACACAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGAGCTTTCTCTTTAAAGTCACTGTGGTTGTGGAAGGAGACAGCTCTGTGCGCTAATTTCATCAAGTaGGAGGAACTCTTTCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: PRAFSLKSLWLWKETALCANFIK*EELFLF Trigger: AAAGAGAAAGAGTTCCTCCAACTTGATGAAATTAGC...GCACAGAGCTGTCTCCTTCCACAACCACAGTGACTTTAAAGAGAAAGCTCTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR TCA 72 bp | GGGCAACATTTCTGGGAAAACAATGAGTCAAACCCTTaGGGCAAATGCACATCTCTTGTCCATAGCACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: GQHFWENNESNP*GKCTSLVHSTV Trigger: TACTGTGCTATGGACAAGAGATGTGCATTTGCCTCAAGGGTTTGACTCATTGTTTTCCCAGAAATGTTGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTGATGAAACTTCAATGACTTGCATCAGAGTTTCTGCCGTCGGTTCAGATTTGCCACCTGAATCTTTCTaGGGCAACATTTCTGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: CDETSMTCIRVSAVGSDLPPESF*GNISGK Trigger: TTTCCCAGAAATGTTGCCCAAGAAAGATTCAGGTGG...CAAATCTGAACCGACGGCAGAAACTCTGATGCAAGTCATTGAAGTTTCATCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR GCA 72 bp | GCACATAAGAGGTGCTTATTACAGGTCTTTCTCTCCTaGTCTCCCATCCGCAGTTATAAGCAAGAAATTGAT | + |
|
Preference number: 3 (lower is better) Translates to: AHKRCLLQVFLS*SPIRSYKQEID Trigger: ATCAATTTCTTGCTTATAACTGCGGATGGGAGAGCAGGAGAGAAAGACCTGTAATAAGCACCTCTTATGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR CCA 72 bp | TGTGATGGGGTTGTAGCTAGGCTGGAAATGACAGCATaGAAGCAATGCTTGTTCTTCATGGTTAATGGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: CDGVVARLEMTA*KQCLFFMVNGN Trigger: ATTACCATTAACCATGAAGAACAAGCATTGCTTCCATGCTGTCATTTCCAGCCTAGCTACAACCCCATCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR CCA 72 bp | CATCCTGAGAAGCAGGATATGTTCTACATGATAAGATaGGGAAATTCCCATGAAGTCAGGCCTAGAGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: HPEKQDMFYMIR*GNSHEVRPRGF Trigger: AAAACCTCTAGGCCTGACTTCATGGGAATTTCCCCATCTTATCATGTAGAACATATCCTGCTTCTCAGGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR CCA 72 bp | AGGTTTAATGGGAAGTTTAAAGTGACAACAGTCACATaGGTAACTAGTCCTGGACCTTCTACAGGAATGGTC | + |
|
Preference number: 3 (lower is better) Translates to: RFNGKFKVTTVT*VTSPGPSTGMV Trigger: GACCATTCCTGTAGAAGGTCCAGGACTAGTTACCCATGTGACTGTTGTCACTTTAAACTTCCCATTAAACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR TCA 72 bp | AAGGAATTTTGCTTAGCCATTTCGGAGCCTTCCAAATaGGCTAGGACTAACCTCCAGAAAGCTTCCTTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: KEFCLAISEPSK*ARTNLQKASFY Trigger: ATAAAAGGAAGCTTTCTGGAGGTTAGTCCTAGCTCATTTGGAAGGCTCCGAAATGGCTAAGCAAAATTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGGACACATGCAAATGTCATCCTGAGAAGCAGGATATGTTCTACATGATAAGATCTGTTCTTACAGAATaGATGTACGGTTATATGGCC | + |
|
Preference number: 3 (lower is better) Translates to: GDTCKCHPEKQDMFYMIRSVLTE*MYGYMA Trigger: GGCCATATAACCGTACATCAATTCTGTAAGAACAGA...TCTTATCATGTAGAACATATCCTGCTTCTCAGGATGACATTTGCATGTGTCCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR TCA 72 bp | CCCAATGTTAAGATAAGGAGACTGGGGAAATTAAATTaGGCAAAGTTCTTTCAACTCTTTCCGGGACTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: PNVKIRRLGKLN*AKFFQLFPGLH Trigger: ATGGAGTCCCGGAAAGAGTTGAAAGAACTTTGCTCAATTTAATTTCCCCAGTCTCCTTATCTTAACATTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR TCA 72 bp | TTTTCTCACCCTAGCACAAGTGTGCTCTTATCTTATTaGTCTACTGAGAAGTTAACCCAGAGCTTTCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: FSHPSTSVLLSY*STEKLTQSFLF Trigger: AAAGAGAAAGCTCTGGGTTAACTTCTCAGTAGATCAATAAGATAAGAGCACACTTGTGCTAGGGTGAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCTTCAAAAACAGTAGCAGAGAGAAACAAAACGTACTCCTTAGACCACCATGCTAATTTCATCAAGTaGGAGGAACTCTTTCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SSSKTVAERNKTYSLDHHANFIK*EELFLF Trigger: AAAGAGAAAGAGTTCCTCCAACTTGATGAAATTAGC...ATGGTGGTCTAAGGAGTACGTTTTGTTTCTCTCTGCTACTGTTTTTGAAGAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR CCA 72 bp | ATCTGCCCAGTTATAAGAAGGGATAACATTATCTTGTaGATGCTAATTTCATCAAGTTGGAGGAACTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: ICPVIRRDNIIL*MLISSSWRNSF Trigger: GAAAGAGTTCCTCCAACTTGATGAAATTAGCATCCACAAGATAATGTTATCCCTTCTTATAACTGGGCAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTTTAGATGCAAGATCAACTATCTCCTCTCTTTACCAGAGGATAAATAAGGAAGTTATAAGCAAGAAATaGATAAGCCTGCCAAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: SLDARSTISSLYQRINKEVISKK*ISLPNS Trigger: AGAGTTTGGCAGGCTTATCAATTTCTTGCTTATAAC...TTCCTTATTTATCCTCTGGTAAAGAGAGGAGATAGTTGATCTTGCATCTAAAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR TCA 72 bp | AATCTGAAGGAAAAGGCTTCATTTATCAAACTTCTTTaGGCCTTGGGATCTTCATTTGTACACATCAATATG | + |
|
Preference number: 3 (lower is better) Translates to: NLKEKASFIKLL*ALGSSFVHINM Trigger: CATATTGATGTGTACAAATGAAGATCCCAAGGCTCAAAGAAGTTTGATAAATGAAGCCTTTTCCTTCAGATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR CCA 72 bp | AGGAAAAGGCTTCATTTATCAAACTTCTTTGAGCCTTaGGATCTTCATTTGTACACATCAATATGTTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: RKRLHLSNFFEP*DLHLYTSICSV Trigger: AACAGAACATATTGATGTGTACAAATGAAGATCCCAAGGCTCAAAGAAGTTTGATAAATGAAGCCTTTTCCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| CDS-3UTR CCA 90 bp | TGTGTGCAGCACATGTGTACTGTGGCTGGCACTACTCCCCAGGTGAGGACAGCCCACCAGGATACGGAGTaGTTGAAGGGTGGAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CVQHMCTVAGTTPQVRTAHQDTE*LKGGGR Trigger: TCTACCTCCACCCTTCAACCACTCCGTATCCTGGTG...GGCTGTCCTCACCTGGGGAGTAGTGCCAGCCACAGTACACATGTGCTGCACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTTCAAGACATAGCTCTGCCAAGTTCCCTGTGGACACACCTCACAGCCCTGAGTCTCGGCAGCCTGTaGATAAGCACTCCTCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PLQDIALPSSLWTHLTALSLGSL*ISTPPA Trigger: CGCTGGAGGAGTGCTTATCCACAGGCTGCCGAGACT...CAGGGCTGTGAGGTGTGTCCACAGGGAACTTGGCAGAGCTATGTCTTGAAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| CDS-3UTR TCA 90 bp | CCTCTTCAAGACATAGCTCTGCCAAGTTCCCTGTGGACACACCTCACAGCCCTGGGACACAGCGTTTGGTaGCAGAGATGCTGTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLQDIALPSSLWTHLTALGHSVW*QRCCSL Trigger: CAGGGAACAGCATCTCTGTCACCAAACGCTGTGTCC...CAGGGCTGTGAGGTGTGTCCACAGGGAACTTGGCAGAGCTATGTCTTGAAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| CDS-3UTR TCA 90 bp | GGCACTACTCCCCAGGTGAGGACAGCCTATACCTTTGAGAACCCAATCCCTGAAGGACACAGCGTTTGGTaGCAGAGATGCTGTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTTPQVRTAYTFENPIPEGHSVW*QRCCSL Trigger: CAGGGAACAGCATCTCTGTCACCAAACGCTGTGTCC...TTCAGGGATTGGGTTCTCAAAGGTATAGGCTGTCCTCACCTGGGGAGTAGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| CDS-3UTR TCA 90 bp | TGTGTGCAGCACATGTGTACTGTGGCTGGCACTACTCCCCAGGTGAGGACAGCCCGTCTGGTTTATAGGTaGTGTGGTAGCAAATGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CVQHMCTVAGTTPQVRTARLVYR*CGSKCG Trigger: GCCACATTTGCTACCACATCACCTATAAACCAGACG...GGCTGTCCTCACCTGGGGAGTAGTGCCAGCCACAGTACACATGTGCTGCACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| CDS-3UTR TCA 90 bp | GGCACTACTCCCCAGGTGAGGACAGCCTATACCTTTGAGAACCCAATCCCTGAAGTGAAGTCTCGGGACTaGGCAGCCTTCAGACAATCA | + |
|
Preference number: 4 (lower is better) Translates to: GTTPQVRTAYTFENPIPEVKSRD*AAFRQS Trigger: TGATTGTCTGAAGGCTGCTCAGTCCCGAGACTTCAC...TTCAGGGATTGGGTTCTCAAAGGTATAGGCTGTCCTCACCTGGGGAGTAGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGAGCTTTCTCTTTAAAGTCACTGTGGTTGTGGAAGGAGACAGCTCTGTGCGGACACAGCGTTTGGTaGCAGAGATGCTGTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PRAFSLKSLWLWKETALCGHSVW*QRCCSL Trigger: CAGGGAACAGCATCTCTGTCACCAAACGCTGTGTCC...GCACAGAGCTGTCTCCTTCCACAACCACAGTGACTTTAAAGAGAAAGCTCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| CDS-3UTR GCA 90 bp | GAGAACCCAATCCCTGAAAACCAGCCAGGGAGGCTCTTGTGTGGTCAGTCCCTTCAGGAGCCCATCGGTTaGATTCATAATTGTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ENPIPENQPGRLLCGQSLQEPIG*IHNCLL Trigger: CAGCAGACAATTATGAATGCAACCGATGGGCTCCTG...AAGGGACTGACCACACAAGAGCCTCCCTGGCTGGTTTTCAGGGATTGGGTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| CDS-3UTR GCA 90 bp | AACGATACCTCCTGCATCCATAGCTTATTCCTCAGAGGGTCCAGGGCCTCCTGCCAGGAGCCCATCGGTTaGATTCATAATTGTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NDTSCIHSLFLRGSRASCQEPIG*IHNCLL Trigger: CAGCAGACAATTATGAATGCAACCGATGGGCTCCTG...GCAGGAGGCCCTGGACCCTCTGAGGAATAAGCTATGGATGCAGGAGGTATCGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| CDS-3UTR TCA 90 bp | GCAACACCTGGAGAAAATAATCCTGCTGGTCCAGCTGGAATCCTGGCACTCAGGTTATGTCTTTCACTGTaGAGTCTCGGGACTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ATPGENNPAGPAGILALRLCLSL*SLGTEQ Trigger: CTGCTCAGTCCCGAGACTTCACAGTGAAAGACATAA...CCTGAGTGCCAGGATTCCAGCTGGACCAGCAGGATTATTTTCTCCAGGTGTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| CDS-3UTR GCA 90 bp | GGCACTACTCCCCAGGTGAGGACAGCCTATACCTTTGAGAACCCAATCCCTGAACAGGAGCCCATCGGTTaGATTCATAATTGTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTTPQVRTAYTFENPIPEQEPIG*IHNCLL Trigger: CAGCAGACAATTATGAATGCAACCGATGGGCTCCTG...TTCAGGGATTGGGTTCTCAAAGGTATAGGCTGTCCTCACCTGGGGAGTAGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| CDS-3UTR CCA 90 bp | TCATTGACCTCTTCAAGACATAGCTCTGCCAAGTTCCCTGTGGACACACCTCACCACCAGGATACGGAGTaGTTGAAGGGTGGAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLTSSRHSSAKFPVDTPHHQDTE*LKGGGR Trigger: TCTACCTCCACCCTTCAACCACTCCGTATCCTGGTG...GTGAGGTGTGTCCACAGGGAACTTGGCAGAGCTATGTCTTGAAGAGGTCAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| CDS-3UTR CCA 90 bp | CACACCTCACAGCCCTGCAAAGACTATCACACCAGTGATGGCCTCCACCTGAATGGGTGCCCATTCGTCTaGTTTATAGGTGATGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: HTSQPCKDYHTSDGLHLNGCPFV*FIGDVV Trigger: TACCACATCACCTATAAACCAGACGAATGGGCACCC...ATTCAGGTGGAGGCCATCACTGGTGTGATAGTCTTTGCAGGGCTGTGAGGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR CAA 72 bp | GTGGCTGCGATGACGTCTGGGGTTGCTGTGATTGTGTaGTGTCACTACTGCCAAGCCAATGACTTCATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VAAMTSGVAVIV*CHYCQANDFMH Trigger: ATGCATGAAGTCATTGGCTTGGCAGTAGTGACACAACACAATCACAGCAACCCCAGACGTCATCGCAGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR CAA 72 bp | GCCAGGGAGGCTCTTGTGTGGTCAGTCCCTTGTCTCTaGTTCAGATTGCATGCAGACTTGGCAAATGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AREALVWSVPCL*FRLHADLANVS Trigger: ACTGACATTTGCCAAGTCTGCATGCAATCTGAACAAGAGACAAGGGACTGACCACACAAGAGCCTCCCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| CDS-3UTR CCA 90 bp | ATAATCCTGCTGGTCCAGCTGGAATCCTGGCACTCAGGAAGCATAATTAGCAACCACCAGGATACGGAGTaGTTGAAGGGTGGAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: IILLVQLESWHSGSIISNHQDTE*LKGGGR Trigger: TCTACCTCCACCCTTCAACCACTCCGTATCCTGGTG...GTTGCTAATTATGCTTCCTGAGTGCCAGGATTCCAGCTGGACCAGCAGGATTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| 3UTR CAA 72 bp | AAAACCAGCCAGGGAGGCTCTTGTGTGGTCAGTCCCTaGTCTCTTGTTCAGATTGCATGCAGACTTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KTSQGGSCVVSP*SLVQIACRLGK Trigger: TTTGCCAAGTCTGCATGCAATCTGAACAAGAGACAAGGGACTGACCACACAAGAGCCTCCCTGGCTGGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGAGCTTTCTCTTTAAAGTCACTGTGGTTGTGGAAGGAGACAGCTCTGTGCCGTCTGGTTTATAGGTaGTGTGGTAGCAAATGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PRAFSLKSLWLWKETALCRLVYR*CGSKCG Trigger: GCCACATTTGCTACCACATCACCTATAAACCAGACG...GCACAGAGCTGTCTCCTTCCACAACCACAGTGACTTTAAAGAGAAAGCTCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| CDS-3UTR TCA 90 bp | GGGGACACATGCAAATGTCATCCTGAGAAGCAGGATATGTTCTACATGATAAGAGTGAAGTCTCGGGACTaGGCAGCCTTCAGACAATCA | + |
|
Preference number: 4 (lower is better) Translates to: GDTCKCHPEKQDMFYMIRVKSRD*AAFRQS Trigger: TGATTGTCTGAAGGCTGCTCAGTCCCGAGACTTCAC...TCTTATCATGTAGAACATATCCTGCTTCTCAGGATGACATTTGCATGTGTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCTTCAAAAACAGTAGCAGAGAGAAACAAAACGTACTCCTTAGACCACCATAGTCTCGGCAGCCTGTaGATAAGCACTCCTCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SSSKTVAERNKTYSLDHHSLGSL*ISTPPA Trigger: CGCTGGAGGAGTGCTTATCCACAGGCTGCCGAGACT...ATGGTGGTCTAAGGAGTACGTTTTGTTTCTCTCTGCTACTGTTTTTGAAGAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| CDS-3UTR TCA 90 bp | ACATGCAAATGTCATCCTGAGAAGCAGGATATGTTCTACATGATAAGATGGGGAGTGAAGTCTCGGGACTaGGCAGCCTTCAGACAATCA | + |
|
Preference number: 4 (lower is better) Translates to: TCKCHPEKQDMFYMIRWGVKSRD*AAFRQS Trigger: TGATTGTCTGAAGGCTGCTCAGTCCCGAGACTTCAC...TCCCCATCTTATCATGTAGAACATATCCTGCTTCTCAGGATGACATTTGCATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
||
| CDS-3UTR TCA 90 bp | ACATGCAAATGTCATCCTGAGAAGCAGGATATGTTCTACATGATAAGATGGGGAAGGATACGGAGTGGTTaGAGGGTGGAGGTAGATTAT | + |
|
Preference number: 4 (lower is better) Translates to: TCKCHPEKQDMFYMIRWGRIRSG*RVEVDY Trigger: ATAATCTACCTCCACCCTTCAACCACTCCGTATCCT...TCCCCATCTTATCATGTAGAACATATCCTGCTTCTCAGGATGACATTTGCATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| CDS-3UTR TCA 90 bp | ACATGCAAATGTCATCCTGAGAAGCAGGATATGTTCTACATGATAAGATGGGGACGTCTGGTTTATAGGTaGTGTGGTAGCAAATGTGGC | + |
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Preference number: 4 (lower is better) Translates to: TCKCHPEKQDMFYMIRWGRLVYR*CGSKCG Trigger: GCCACATTTGCTACCACATCACCTATAAACCAGACG...TCCCCATCTTATCATGTAGAACATATCCTGCTTCTCAGGATGACATTTGCATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| CDS-3UTR CCA 90 bp | ACATGCAAATGTCATCCTGAGAAGCAGGATATGTTCTACATGATAAGATGGGGAGGGTGCCCATTCGTCTaGTTTATAGGTGATGTGGTA | + |
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Preference number: 4 (lower is better) Translates to: TCKCHPEKQDMFYMIRWGGCPFV*FIGDVV Trigger: TACCACATCACCTATAAACCAGACGAATGGGCACCC...TCCCCATCTTATCATGTAGAACATATCCTGCTTCTCAGGATGACATTTGCATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| CDS-3UTR TCA 90 bp | GGTGCAGGTGTGATTGCAATTAAGTCAATGGTTCTTTACTCTTTTCCTGAAAAGAGGATACGGAGTGGTTaGAGGGTGGAGGTAGATTAT | + |
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Preference number: 4 (lower is better) Translates to: GAGVIAIKSMVLYSFPEKRIRSG*RVEVDY Trigger: ATAATCTACCTCCACCCTTCAACCACTCCGTATCCT...CTTTTCAGGAAAAGAGTAAAGAACCATTGACTTAATTGCAATCACACCTGCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| CDS-3UTR TCA 90 bp | CTTGTCCATAGCACAGTAACATTTTCAGCATCAGTACAAGGAACACAGATAACTAGGATACGGAGTGGTTaGAGGGTGGAGGTAGATTAT | + |
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Preference number: 4 (lower is better) Translates to: LVHSTVTFSASVQGTQITRIRSG*RVEVDY Trigger: ATAATCTACCTCCACCCTTCAACCACTCCGTATCCT...AGTTATCTGTGTTCCTTGTACTGATGCTGAAAATGTTACTGTGCTATGGACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| CDS-3UTR CCA 90 bp | TCTTCTTCAAAAACAGTAGCAGAGAGAAACAAAACGTACTCCTTAGACCACCATGGGTGCCCATTCGTCTaGTTTATAGGTGATGTGGTA | + |
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Preference number: 4 (lower is better) Translates to: SSSKTVAERNKTYSLDHHGCPFV*FIGDVV Trigger: TACCACATCACCTATAAACCAGACGAATGGGCACCC...ATGGTGGTCTAAGGAGTACGTTTTGTTTCTCTCTGCTACTGTTTTTGAAGAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| CDS-3UTR TCA 90 bp | TCTTTAGATGCAAGATCAACTATCTCCTCTCTTTACCAGAGGATAAATAAGGAATTATGTCTTTCACTGTaGAGTCTCGGGACTGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SLDARSTISSLYQRINKELCLSL*SLGTEQ Trigger: CTGCTCAGTCCCGAGACTTCACAGTGAAAGACATAA...TTCCTTATTTATCCTCTGGTAAAGAGAGGAGATAGTTGATCTTGCATCTAAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| 3UTR CAA 72 bp | CCAATCTGCCCAGTTATAAGAAGGGATAACATTATCTaGTGGATGCTAATTTCATCAAGTTGGAGGAACTCT | + |
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Preference number: 4 (lower is better) Translates to: PICPVIRRDNII*WMLISSSWRNS Trigger: AGAGTTCCTCCAACTTGATGAAATTAGCATCCACAAGATAATGTTATCCCTTCTTATAACTGGGCAGATTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| CDS-3UTR CAA 90 bp | CCTCCTGCATCCATAGCTTATTCCTCAGAGGGTCCAGGGCCTCCTGCAGCTCATAGCGGGACACAGCGTTaGGTGACAGAGATGCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: PPASIAYSSEGPGPPAAHSGTQR*VTEMLF Trigger: GAACAGCATCTCTGTCACCAAACGCTGTGTCCCGCT...ATGAGCTGCAGGAGGCCCTGGACCCTCTGAGGAATAAGCTATGGATGCAGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| CDS-3UTR CAA 90 bp | CAGGTGAGGACAGCCTATACCTTTGAGAACCCAATCCCTGAAAACCAGCCAGGGAGCGGGACACAGCGTTaGGTGACAGAGATGCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: QVRTAYTFENPIPENQPGSGTQR*VTEMLF Trigger: GAACAGCATCTCTGTCACCAAACGCTGTGTCCCGCT...CCCTGGCTGGTTTTCAGGGATTGGGTTCTCAAAGGTATAGGCTGTCCTCACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| CDS TCA 90 bp | GATACGGAGTGGTTGAAGGGTGGAGGTAGATTATGTCTTTCACTGTaGAGTCTCGGGACTGAGCAGCCTTCAGACAATCAGCCACCAGGC | + |
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Preference number: 5 (lower is better) Translates to: DTEWLKGGGRLCLSL*SLGTEQPSDNQPPG Trigger: GCCTGGTGGCTGATTGTCTGAAGGCTGCTCAGTCCCGAGACTTCACAGTGAAAGACATAATCTACCTCCACCCTTCAACCACTCCGTATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000126337.2 ENSMUST00000128451.8 ENSMUST00000169232.2 |
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| CDS GCA 90 bp | TTCGAGGGAGTGGTAGATTACAGATATTTCCTTCACAGCAGGAGGTaGAGATCTTGTAGCCTTCGTGCTCTGAGTCTCGGCAGCCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: FEGVVDYRYFLHSRR*RSCSLRALSLGSLW Trigger: CCACAGGCTGCCGAGACTCAGAGCACGAAGGCTACAAGATCTGCACCTCCTGCTGTGAAGGAAATATCTGTAATCTACCACTCCCTCGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| CDS-3UTR CAA 90 bp | CCCAGAGCTTTCTCTTTAAAGTCACTGTGGTTGTGGAAGGAGACAGCTCTGTGCAGCGGGACACAGCGTTaGGTGACAGAGATGCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: PRAFSLKSLWLWKETALCSGTQR*VTEMLF Trigger: GAACAGCATCTCTGTCACCAAACGCTGTGTCCCGCT...GCACAGAGCTGTCTCCTTCCACAACCACAGTGACTTTAAAGAGAAAGCTCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| CDS GCA 90 bp | AGCCACACCCACAAGCAGGACACGATCACTGAAACACAGTGTGGGTaGCCATTCGTCTGGTTTATAGGTGATGTGGTAGCAAATGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: SHTHKQDTITETQCG*PFVWFIGDVVANVA Trigger: TGCCACATTTGCTACCACATCACCTATAAACCAGACGAATGGGCACCCACACTGTGTTTCAGTGATCGTGTCCTGCTTGTGGGTGTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| CDS GCA 90 bp | ACAGTAGATGTCAGGAGCCCATCGGTTGCATTCATAATTGTCTGCTaGTTTCTCACAGGTGAAACACTTAAACCCACCAGGATACGGAGT | + |
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Preference number: 5 (lower is better) Translates to: TVDVRSPSVAFIIVC*FLTGETLKPTRIRS Trigger: ACTCCGTATCCTGGTGGGTTTAAGTGTTTCACCTGTGAGAAAGCAGCAGACAATTATGAATGCAACCGATGGGCTCCTGACATCTACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000126337.2 ENSMUST00000128451.8 ENSMUST00000169232.2 |
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| CDS CCA 90 bp | AAGCAGGACACGATCACTGAAACACAGTGTGGGTGCCCATTCGTCTaGTTTATAGGTGATGTGGTAGCAAATGTGGCATCAGTTTCATTT | + |
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Preference number: 5 (lower is better) Translates to: KQDTITETQCGCPFV*FIGDVVANVASVSF Trigger: AAATGAAACTGATGCCACATTTGCTACCACATCACCTATAAACCAGACGAATGGGCACCCACACTGTGTTTCAGTGATCGTGTCCTGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| CDS CCA 72 bp | TCTTGTAGCCTTCGTGCTCTGAGTCTCGGCAGCCTGTaGATAAGCACTCCTCCAGCGGGACACAGCGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: SCSLRALSLGSL*ISTPPAGHSVW Trigger: CCAAACGCTGTGTCCCGCTGGAGGAGTGCTTATCCACAGGCTGCCGAGACTCAGAGCACGAAGGCTACAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000128451.8 ENSMUST00000169232.2 |
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| CDS CAA 72 bp | CCTGTGGATAAGCACTCCTCCAGCGGGACACAGCGTTaGGTGACAGAGATGCTGTTCCCTGTGACTTCCATC | + |
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Preference number: 6 (lower is better) Translates to: PVDKHSSSGTQR*VTEMLFPVTSI Trigger: GATGGAAGTCACAGGGAACAGCATCTCTGTCACCAAACGCTGTGTCCCGCTGGAGGAGTGCTTATCCACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000128451.8 ENSMUST00000169232.2 |
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| CDS TCA 72 bp | GAGTCCCAGCCACACCCACAAGCAGGACACGATCACTaGAACACAGTGTGGGTGCCCATTCGTCTGGTTTAT | + |
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Preference number: 6 (lower is better) Translates to: ESQPHPQAGHDH*NTVWVPIRLVY Trigger: ATAAACCAGACGAATGGGCACCCACACTGTGTTTCAGTGATCGTGTCCTGCTTGTGGGTGTGGCTGGGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| CDS GCA 72 bp | GTGGTAGATTACAGATATTTCCTTCACAGCAGGAGGTaGAGATCTTGTAGCCTTCGTGCTCTGAGTCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: VVDYRYFLHSRR*RSCSLRALSLG Trigger: GCCGAGACTCAGAGCACGAAGGCTACAAGATCTGCACCTCCTGCTGTGAAGGAAATATCTGTAATCTACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| CDS GCA 72 bp | CACAAGCAGGACACGATCACTGAAACACAGTGTGGGTaGCCATTCGTCTGGTTTATAGGTGATGTGGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: HKQDTITETQCG*PFVWFIGDVVA Trigger: TGCTACCACATCACCTATAAACCAGACGAATGGGCACCCACACTGTGTTTCAGTGATCGTGTCCTGCTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000169232.2 |
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| CDS TCA 72 bp | TGGTTGAAGGGTGGAGGTAGATTATGTCTTTCACTGTaGAGTCTCGGGACTGAGCAGCCTTCAGACAATCAG | + |
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Preference number: 6 (lower is better) Translates to: WLKGGGRLCLSL*SLGTEQPSDNQ Trigger: CTGATTGTCTGAAGGCTGCTCAGTCCCGAGACTTCACAGTGAAAGACATAATCTACCTCCACCCTTCAACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053208.14 ENSMUST00000112712.10 ENSMUST00000126337.2 ENSMUST00000128451.8 ENSMUST00000169232.2 |
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