Pregenerated sensors for LYPD5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030484Ensembl transcript IDs: ENSMUST00000032683.6
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGGAGGTGGGGCCAGCGGCAGTAAGGAGGGACAGAGAGCAGGGTaGAAGGTTGTGACTGGAGGGACAGGAGTGCAGCTCTTATTTTCA | + |
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Preference number: 1 (lower is better) Translates to: PGGGASGSKEGQRAG*KVVTGGTGVQLLFS Trigger: TGAAAATAAGAGCTGCACTCCTGTCCCTCCAGTCACAACCTTCCACCCTGCTCTCTGTCCCTCCTTACTGCCGCTGGCCCCACCTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR GCA 90 bp | CAGCTTGGCCTTGAAGTAGCTATCCTCCTGCCTCAGCCTCCTGAGTaGTGGGACAACAGCCTGGTATTACCACTAGCCTTGCTAGAAGTG | + |
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Preference number: 1 (lower is better) Translates to: QLGLEVAILLPQPPE*WDNSLVLPLALLEV Trigger: CACTTCTAGCAAGGCTAGTGGTAATACCAGGCTGTTGTCCCAGCACTCAGGAGGCTGAGGCAGGAGGATAGCTACTTCAAGGCCAAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR CCA 90 bp | CTTGGCCTTGAAGTAGCTATCCTCCTGCCTCAGCCTCCTGAGTGCTaGGACAACAGCCTGGTATTACCACTAGCCTTGCTAGAAGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: LGLEVAILLPQPPEC*DNSLVLPLALLEVG Trigger: ACCCACTTCTAGCAAGGCTAGTGGTAATACCAGGCTGTTGTCCCAGCACTCAGGAGGCTGAGGCAGGAGGATAGCTACTTCAAGGCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR TCA 90 bp | TTTGTTGTGAGAGGGTCACAAAAGGCTCATGTATTGAAGGCTTGGTaGCCAGGGGATGGCACTATTGAAAGCTGGTTGGACCTCGTTCAA | + |
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Preference number: 1 (lower is better) Translates to: FVVRGSQKAHVLKAW*PGDGTIESWLDLVQ Trigger: TTGAACGAGGTCCAACCAGCTTTCAATAGTGCCATCCCCTGGTCACCAAGCCTTCAATACATGAGCCTTTTGTGACCCTCTCACAACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR TCA 90 bp | CAGCCTGGTATTACCACTAGCCTTGCTAGAAGTGGGTTTTTAAGGTaGGTGGCATGGTTTGTTGTGAGAGGGTCACAAAAGGCTCATGTA | + |
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Preference number: 1 (lower is better) Translates to: QPGITTSLARSGFLR*VAWFVVRGSQKAHV Trigger: TACATGAGCCTTTTGTGACCCTCTCACAACAAACCATGCCACTCACCTTAAAAACCCACTTCTAGCAAGGCTAGTGGTAATACCAGGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR-3UTR TCA 90 bp | ATCCCACATGTAATCCCAGCATCTGTCTGGCAGGTCGAGGTGAGGGGGTCAGGAAGTCCAGCTTGGCCTTaGAGTAGCTATCCTCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: IPHVIPASVWQVEVRGSGSPAWP*SSYPPA Trigger: GGCAGGAGGATAGCTACTTCAAGGCCAAGCTGGACT...TCCTGACCCCCTCACCTCGACCTGCCAGACAGATGCTGGGATTACATGTGGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR-3UTR CCA 90 bp | ATCCCACATGTAATCCCAGCATCTGTCTGGCAGGTCGAGGTGAGGGGGTCAGGAGTGGAAGGTTGTGACTaGAGGGACAGGAGTGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: IPHVIPASVWQVEVRGSGVEGCD*RDRSAA Trigger: AGCTGCACTCCTGTCCCTCCAGTCACAACCTTCCAC...TCCTGACCCCCTCACCTCGACCTGCCAGACAGATGCTGGGATTACATGTGGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR-3UTR CCA 90 bp | ATTTCCCGCTGCTGCATAATACTCCATTGTGTGGCTAGATCTCAGCCTCCTCATTGGGGGAGTTTCTGTTaGGGTGACGGGCCCAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: ISRCCIILHCVARSQPPHWGSFC*GDGPKK Trigger: CTTCTTGGGCCCGTCACCCCAACAGAAACTCCCCCA...ATGAGGAGGCTGAGATCTAGCCACACAATGGAGTATTATGCAGCAGCGGGAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR-3UTR CCA 90 bp | TATGTTCTACTAGTCTATATAGTTTGGGGGAGTTTCTGTTGGGGTGACGGGCCCCAGCCTCCTGAGTGCTaGGACAACAGCCTGGTATTA | + |
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Preference number: 2 (lower is better) Translates to: YVLLVYIVWGSFCWGDGPQPPEC*DNSLVL Trigger: TAATACCAGGCTGTTGTCCCAGCACTCAGGAGGCTG...GGGCCCGTCACCCCAACAGAAACTCCCCCAAACTATATAGACTAGTAGAACATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR-3UTR TCA 90 bp | CAACATCTAGTTATTTCCAAACACCCCGTATTTCCTCTTTTGGTCACTTGTTCCCAGGGTGGAAGGTTGTaGCTGGAGGGACAGGAGTGC | + |
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Preference number: 2 (lower is better) Translates to: QHLVISKHPVFPLLVTCSQGGRL*LEGQEC Trigger: GCACTCCTGTCCCTCCAGTCACAACCTTCCACCCTG...GGAACAAGTGACCAAAAGAGGAAATACGGGGTGTTTGGAAATAACTAGATGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR-3UTR TCA 90 bp | CCACATGTAATCCCAGCATCTGTCTGGCAGGTCGAGGTGAGGGGGTCAGGAGTTCTTTCATACGTTGTTTaGATGGAATCATACAACCTG | + |
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Preference number: 2 (lower is better) Translates to: PHVIPASVWQVEVRGSGVLSYVV*MESYNL Trigger: CAGGTTGTATGATTCCATTCAAACAACGTATGAAAG...AACTCCTGACCCCCTCACCTCGACCTGCCAGACAGATGCTGGGATTACATGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR-3UTR CCA 90 bp | AGCAACTTTCATACGTTGTTTGAATGGAATCATACAACCTGTTCTGTTGTGTGCGCCCACACCAGGGGCTaGAGTGATGAGTTGCGGAGC | + |
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Preference number: 2 (lower is better) Translates to: SNFHTLFEWNHTTCSVVCAHTRG*SDELRS Trigger: GCTCCGCAACTCATCACTCCAGCCCCTGGTGTGGGC...GCACACAACAGAACAGGTTGTATGATTCCATTCAAACAACGTATGAAAGTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR-3UTR CCA 90 bp | ATCCCACATGTAATCCCAGCATCTGTCTGGCAGGTCGAGGTGAGGGGGTCAGGACCTCCTCATTCCATTTaGCTGTTCATATTTATTTGG | + |
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Preference number: 2 (lower is better) Translates to: IPHVIPASVWQVEVRGSGPPHSI*LFIFIW Trigger: CCAAATAAATATGAACAGCCAAATGGAATGAGGAGG...TCCTGACCCCCTCACCTCGACCTGCCAGACAGATGCTGGGATTACATGTGGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR-3UTR GCA 90 bp | TCCTTCCTTTCTTTTGAAACATGGTCTCACTATGTAGTCTTGGCTTTCCTGGAACCTCAGCCTCCTGAGTaGTGGGACAACAGCCTGGTA | + |
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Preference number: 2 (lower is better) Translates to: SFLSFETWSHYVVLAFLEPQPPE*WDNSLV Trigger: TACCAGGCTGTTGTCCCAGCACTCAGGAGGCTGAGG...TTCCAGGAAAGCCAAGACTACATAGTGAGACCATGTTTCAAAAGAAAGGAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR-3UTR GCA 90 bp | AGCAACTTTCATACGTTGTTTGAATGGAATCATACAACCTGTTCTGTTGTGTGCGCTGGAGTGATGAGTTaGGGAGCGATCCTGGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: SNFHTLFEWNHTTCSVVCAGVMS*GAILEV Trigger: CACCTCCAGGATCGCTCCGCAACTCATCACTCCAGC...GCACACAACAGAACAGGTTGTATGATTCCATTCAAACAACGTATGAAAGTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR-3UTR GCA 90 bp | AACACCCCGTATTTCCTCTTTTGGTCACTTGTTCCCAAACACGACCACTCTTCCGTCATTTCCCGCTGCTaGATAATACTCCATTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: NTPYFLFWSLVPKHDHSSVISRC*IILHCV Trigger: CACACAATGGAGTATTATGCAGCAGCGGGAAATGAC...GGAAGAGTGGTCGTGTTTGGGAACAAGTGACCAAAAGAGGAAATACGGGGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR-3UTR GCA 90 bp | CAACATCTAGTTATTTCCAAACACCCCGTATTTCCTCTTTTGGTCACTTGTTCCAGGTGTGTGCCACCATaGCTGAAAGGGTCTCACACT | + |
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Preference number: 2 (lower is better) Translates to: QHLVISKHPVFPLLVTCSRCVPP*LKGSHT Trigger: AGTGTGAGACCCTTTCAGGCATGGTGGCACACACCT...GGAACAAGTGACCAAAAGAGGAAATACGGGGTGTTTGGAAATAACTAGATGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR-3UTR GCA 90 bp | GTTCTGTTGTGTGCCTTTACTGTTTTGCTCAACACTGTTTTTGTGAGATTCTTTCTGGAGGGACAGGAGTaGAGCTCTTATTTTCACATC | + |
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Preference number: 2 (lower is better) Translates to: VLLCAFTVLLNTVFVRFFLEGQE*SSYFHI Trigger: GATGTGAAAATAAGAGCTGCACTCCTGTCCCTCCAG...AAAGAATCTCACAAAAACAGTGTTGAGCAAAACAGTAAAGGCACACAACAGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR-3UTR TCA 90 bp | CAACATCTAGTTATTTCCAAACACCCCGTATTTCCTCTTTTGGTCACTTGTTCCTCAACACTGTTTTTGTaGGATTCTTTCAAGGCCACT | + |
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Preference number: 2 (lower is better) Translates to: QHLVISKHPVFPLLVTCSSTLFL*DSFKAT Trigger: AGTGGCCTTGAAAGAATCTCACAAAAACAGTGTTGA...GGAACAAGTGACCAAAAGAGGAAATACGGGGTGTTTGGAAATAACTAGATGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR-3UTR GCA 90 bp | CTCAGCCTCCTCATTCCATTTGGCTGTTCATATTTATTTGGGTTGTTTCCAGTTGGGCCCAAGAAGGACTaGAGTTATATTATAGATTTC | + |
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Preference number: 2 (lower is better) Translates to: LSLLIPFGCSYLFGLFPVGPKKD*SYIIDF Trigger: GAAATCTATAATATAACTGCAGTCCTTCTTGGGCCC...AACTGGAAACAACCCAAATAAATATGAACAGCCAAATGGAATGAGGAGGCTGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR CAA 90 bp | GCAACTTTCATACGTTGTTTGAATGGAATCATACAACCTGTTCTGTaGTGTGCCTTTACTGTTTTGCTCAACACTGTTTTTGTGAGATTC | + |
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Preference number: 2 (lower is better) Translates to: ATFIRCLNGIIQPVL*CAFTVLLNTVFVRF Trigger: GAATCTCACAAAAACAGTGTTGAGCAAAACAGTAAAGGCACACAACAGAACAGGTTGTATGATTCCATTCAAACAACGTATGAAAGTTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR-3UTR CCA 90 bp | AGCAACTTTCATACGTTGTTTGAATGGAATCATACAACCTGTTCTGTTGTGTGCCTTTCTTTTGAAACATaGTCTCACTATGTAGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: SNFHTLFEWNHTTCSVVCLSFET*SHYVVL Trigger: CAAGACTACATAGTGAGACCATGTTTCAAAAGAAAG...GCACACAACAGAACAGGTTGTATGATTCCATTCAAACAACGTATGAAAGTTGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR CCA 72 bp | TTTCACATCATTTTTAAAGGAGCCCACACCAGGGGCTaGAGTGATGAGTTGCGGAGCGATCCTGGAGGTGCT | + |
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Preference number: 3 (lower is better) Translates to: FHIIFKGAHTRG*SDELRSDPGGA Trigger: AGCACCTCCAGGATCGCTCCGCAACTCATCACTCCAGCCCCTGGTGTGGGCTCCTTTAAAAATGATGTGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR CCA 72 bp | CTTGGTGACCAGGGGATGGCACTATTGAAAGCTGGTTaGACCTCGTTCAATGCACTGGATAGATGGGCCTTC | + |
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Preference number: 3 (lower is better) Translates to: LGDQGMALLKAG*TSFNALDRWAF Trigger: GAAGGCCCATCTATCCAGTGCATTGAACGAGGTCCAACCAGCTTTCAATAGTGCCATCCCCTGGTCACCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR-3UTR CAA 90 bp | ATCCCACATGTAATCCCAGCATCTGTCTGGCAGGTCGAGGTGAGGGGGTCAGGAACTAGTCTATATAGTTaGGGGGAGCATATGTTCTAC | + |
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Preference number: 3 (lower is better) Translates to: IPHVIPASVWQVEVRGSGTSLYS*GEHMFY Trigger: GTAGAACATATGCTCCCCCAAACTATATAGACTAGT...TCCTGACCCCCTCACCTCGACCTGCCAGACAGATGCTGGGATTACATGTGGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR TCA 72 bp | AGAGGGTCACAAAAGGCTCATGTATTGAAGGCTTGGTaGCCAGGGGATGGCACTATTGAAAGCTGGTTGGAC | + |
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Preference number: 3 (lower is better) Translates to: RGSQKAHVLKAW*PGDGTIESWLD Trigger: GTCCAACCAGCTTTCAATAGTGCCATCCCCTGGTCACCAAGCCTTCAATACATGAGCCTTTTGTGACCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR-3UTR CAA 90 bp | TTTCCAAACACCCCGTATTTCCTCTTTTGGTCACTTGTTCCCAAACACGACCACTCATGTATTGAAGGCTaGGTGACCAGGGGATGGCAC | + |
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Preference number: 3 (lower is better) Translates to: FPNTPYFLFWSLVPKHDHSCIEG*VTRGWH Trigger: GTGCCATCCCCTGGTCACCAAGCCTTCAATACATGA...GTGGTCGTGTTTGGGAACAAGTGACCAAAAGAGGAAATACGGGGTGTTTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR TCA 72 bp | TGTATTGAAGGCTTGGTGACCAGGGGATGGCACTATTaGAAGCTGGTTGGACCTCGTTCAATGCACTGGATA | + |
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Preference number: 3 (lower is better) Translates to: CIEGLVTRGWHY*KLVGPRSMHWI Trigger: TATCCAGTGCATTGAACGAGGTCCAACCAGCTTTCAATAGTGCCATCCCCTGGTCACCAAGCCTTCAATACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR-3UTR CAA 90 bp | TATGTTCTACTAGTCTATATAGTTTGGGGGAGTTTCTGTTGGGGTGACGGGCCCACTATTGAAAGCTGGTaGGACCTCGTTCAATGCACT | + |
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Preference number: 3 (lower is better) Translates to: YVLLVYIVWGSFCWGDGPTIESW*DLVQCT Trigger: AGTGCATTGAACGAGGTCCAACCAGCTTTCAATAGT...GGGCCCGTCACCCCAACAGAAACTCCCCCAAACTATATAGACTAGTAGAACATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR CCA 72 bp | GTTCTACTAGTCTATATAGTTTGGGGGAGTTTCTGTTaGGGTGACGGGCCCAAGAAGGACTGCAGTTATATT | + |
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Preference number: 3 (lower is better) Translates to: VLLVYIVWGSFC*GDGPKKDCSYI Trigger: AATATAACTGCAGTCCTTCTTGGGCCCGTCACCCCAACAGAAACTCCCCCAAACTATATAGACTAGTAGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR TCA 72 bp | ATTACCACTAGCCTTGCTAGAAGTGGGTTTTTAAGGTaGGTGGCATGGTTTGTTGTGAGAGGGTCACAAAAG | + |
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Preference number: 3 (lower is better) Translates to: ITTSLARSGFLR*VAWFVVRGSQK Trigger: CTTTTGTGACCCTCTCACAACAAACCATGCCACTCACCTTAAAAACCCACTTCTAGCAAGGCTAGTGGTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR TCA 72 bp | ACTAGTCTATATAGTTTGGGGGAGTTTCTGTTGGGGTaGCGGGCCCAAGAAGGACTGCAGTTATATTATAGA | + |
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Preference number: 3 (lower is better) Translates to: TSLYSLGEFLLG*RAQEGLQLYYR Trigger: TCTATAATATAACTGCAGTCCTTCTTGGGCCCGTCACCCCAACAGAAACTCCCCCAAACTATATAGACTAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR GCA 72 bp | GGGAGTTTCTGTTGGGGTGACGGGCCCAAGAAGGACTaGAGTTATATTATAGATTTCAATTCTGCTTTAGAG | + |
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Preference number: 3 (lower is better) Translates to: GSFCWGDGPKKD*SYIIDFNSALE Trigger: CTCTAAAGCAGAATTGAAATCTATAATATAACTGCAGTCCTTCTTGGGCCCGTCACCCCAACAGAAACTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR TCA 72 bp | TGTGTGCCTTTACTGTTTTGCTCAACACTGTTTTTGTaGGATTCTTTCAAGGCCACTGCAGGTAACTGTCAG | + |
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Preference number: 3 (lower is better) Translates to: CVPLLFCSTLFL*DSFKATAGNCQ Trigger: CTGACAGTTACCTGCAGTGGCCTTGAAAGAATCTCACAAAAACAGTGTTGAGCAAAACAGTAAAGGCACACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR TCA 72 bp | CTTCCTTCCTTCCTTCTTTCCTTCCTTCCTTTCTTTTaGAACATGGTCTCACTATGTAGTCTTGGCTTTCCT | + |
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Preference number: 3 (lower is better) Translates to: LPSFLLSFLPFF*NMVSLCSLGFP Trigger: AGGAAAGCCAAGACTACATAGTGAGACCATGTTTCAAAAGAAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR-3UTR CAA 90 bp | CAACATCTAGTTATTTCCAAACACCCCGTATTTCCTCTTTTGGTCACTTGTTCCATACAACCTGTTCTGTaGTGTGCCTTTACTGTTTTG | + |
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Preference number: 3 (lower is better) Translates to: QHLVISKHPVFPLLVTCSIQPVL*CAFTVL Trigger: CAAAACAGTAAAGGCACACAACAGAACAGGTTGTAT...GGAACAAGTGACCAAAAGAGGAAATACGGGGTGTTTGGAAATAACTAGATGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| 3UTR GCA 72 bp | TTGTTTGAATGGAATCATACAACCTGTTCTGTTGTGTaGCTTTACTGTTTTGCTCAACACTGTTTTTGTGAG | + |
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Preference number: 3 (lower is better) Translates to: LFEWNHTTCSVV*LYCFAQHCFCE Trigger: CTCACAAAAACAGTGTTGAGCAAAACAGTAAAGGCACACAACAGAACAGGTTGTATGATTCCATTCAAACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS-3UTR TCA 90 bp | CCACATGTAATCCCAGCATCTGTCTGGCAGGTCGAGGTGAGGGGGTCAGGAGTTATCCGGCCGTTGCCCTaGAAACAGGCGCTCTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: PHVIPASVWQVEVRGSGVIRPLP*KQALWS Trigger: GGACCAGAGCGCCTGTTTTCAGGGCAACGGCCGGAT...AACTCCTGACCCCCTCACCTCGACCTGCCAGACAGATGCTGGGATTACATGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS-3UTR CCA 90 bp | AAGGTGTGTGCCACCATGCCTGAAAGGGTCTCACACTGTAATTCAGGCTGGACCATGTCCAGGGGCTGGTaGTGCCCATGGTGGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KVCATMPERVSHCNSGWTMSRGW*CPWWCR Trigger: CCTGCACCACCATGGGCACCACCAGCCCCTGGACAT...GGTCCAGCCTGAATTACAGTGTGAGACCCTTTCAGGCATGGTGGCACACACCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS-3UTR GCA 90 bp | ATGGCACTATTGAAAGCTGGTTGGACCTCGTTCAATGCACTGGATAGATGGGCCTCCAGGGGCTGGTGGTaGCCATGGTGGTGCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: MALLKAGWTSFNALDRWASRGWW*PWWCRR Trigger: CCTCCTGCACCACCATGGGCACCACCAGCCCCTGGA...GGCCCATCTATCCAGTGCATTGAACGAGGTCCAACCAGCTTTCAATAGTGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS-3UTR CCA 90 bp | AAGGTGTGTGCCACCATGCCTGAAAGGGTCTCACACTGTAATTCAGGCTGGACCTGTGGGTTAGGAGCTTaGCTCAGGTTGGGGAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: KVCATMPERVSHCNSGWTCGLGA*LRLGRA Trigger: CGCCCTCCCCAACCTGAGCCAAGCTCCTAACCCACA...GGTCCAGCCTGAATTACAGTGTGAGACCCTTTCAGGCATGGTGGCACACACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS-3UTR CCA 90 bp | AACACCCCGTATTTCCTCTTTTGGTCACTTGTTCCCAAACACGACCACTCTTCCCAGGCGCTCTGGTCCTaGTGGCACTGGACCCGTCGG | + |
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Preference number: 4 (lower is better) Translates to: NTPYFLFWSLVPKHDHSSQALWS*WHWTRR Trigger: CCGACGGGTCCAGTGCCACCAGGACCAGAGCGCCTG...GGAAGAGTGGTCGTGTTTGGGAACAAGTGACCAAAAGAGGAAATACGGGGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS-3UTR GCA 90 bp | AACACCCCGTATTTCCTCTTTTGGTCACTTGTTCCCAAACACGACCACTCTTCCGCATCCTGGTTGGTCTaGATGGGGCCGGTGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: NTPYFLFWSLVPKHDHSSASWLV*MGPVVG Trigger: CCCCACCACCGGCCCCATGCAGACCAACCAGGATGC...GGAAGAGTGGTCGTGTTTGGGAACAAGTGACCAAAAGAGGAAATACGGGGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS-3UTR CCA 90 bp | TTTCACATCATTTTTAAAGGAGCCCACACCAGGGGCTGGAGTGATGAGTTGCGGGGAGGCAGAGCATCCTaGTTGGTCTGCATGGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: FHIIFKGAHTRGWSDELRGGRAS*LVCMGP Trigger: CGGCCCCATGCAGACCAACCAGGATGCTCTGCCTCC...CCGCAACTCATCACTCCAGCCCCTGGTGTGGGCTCCTTTAAAAATGATGTGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS-3UTR CCA 90 bp | TTTCCAAACACCCCGTATTTCCTCTTTTGGTCACTTGTTCCCAAACACGACCACGCGCTCTGGTCCTGGTaGCACTGGACCCGTCGGGAC | + |
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Preference number: 4 (lower is better) Translates to: FPNTPYFLFWSLVPKHDHALWSW*HWTRRD Trigger: GTCCCGACGGGTCCAGTGCCACCAGGACCAGAGCGC...GTGGTCGTGTTTGGGAACAAGTGACCAAAAGAGGAAATACGGGGTGTTTGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS-3UTR CCA 90 bp | AACACCCCGTATTTCCTCTTTTGGTCACTTGTTCCCAAACACGACCACTCTTCCTGGTGGTGCCCATGGTaGTGCAGGAGGGCCGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: NTPYFLFWSLVPKHDHSSWWCPW*CRRAGD Trigger: GTCACCGGCCCTCCTGCACCACCATGGGCACCACCA...GGAAGAGTGGTCGTGTTTGGGAACAAGTGACCAAAAGAGGAAATACGGGGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS-3UTR GCA 90 bp | AGGGTCACAAAAGGCTCATGTATTGAAGGCTTGGTGACCAGGGGATGGCACTATGGGCCGAGGACATGGTaGCAGGCAGGATCTGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: RVTKGSCIEGLVTRGWHYGPRTW*QAGSVS Trigger: TGACACAGATCCTGCCTGGCACCATGTCCTCGGCCC...ATAGTGCCATCCCCTGGTCACCAAGCCTTCAATACATGAGCCTTTTGTGACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS-3UTR CCA 90 bp | TATGTTCTACTAGTCTATATAGTTTGGGGGAGTTTCTGTTGGGGTGACGGGCCCTGGATGTCCAGGGGCTaGTGGTGCCCATGGTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: YVLLVYIVWGSFCWGDGPWMSRG*WCPWWC Trigger: GCACCACCATGGGCACCACCAGCCCCTGGACATCCA...GGGCCCGTCACCCCAACAGAAACTCCCCCAAACTATATAGACTAGTAGAACATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS-3UTR GCA 90 bp | AACACCCCGTATTTCCTCTTTTGGTCACTTGTTCCCAAACACGACCACTCTTCCCTCCCGAGGAAGCAGTaGAGGAAGGTCCTGGGGATC | + |
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Preference number: 4 (lower is better) Translates to: NTPYFLFWSLVPKHDHSSLPRKQ*RKVLGI Trigger: GATCCCCAGGACCTTCCTGCACTGCTTCCTCGGGAG...GGAAGAGTGGTCGTGTTTGGGAACAAGTGACCAAAAGAGGAAATACGGGGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS-3UTR CCA 90 bp | AGTTTCTGTTGGGGTGACGGGCCCAAGAAGGACTGCAGTTATATTATAGATTTCTCTGCATGGGGCCGGTaGTGGGGCCTGTCCAGCATC | + |
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Preference number: 4 (lower is better) Translates to: SFCWGDGPKKDCSYIIDFSAWGR*WGLSSI Trigger: GATGCTGGACAGGCCCCACCACCGGCCCCATGCAGA...GAAATCTATAATATAACTGCAGTCCTTCTTGGGCCCGTCACCCCAACAGAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS-3UTR CCA 90 bp | TATGTTCTACTAGTCTATATAGTTTGGGGGAGTTTCTGTTGGGGTGACGGGCCCAACCCTGCAGGTCGATaGATGTCCAGGGGCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: YVLLVYIVWGSFCWGDGPNPAGR*MSRGWW Trigger: CCACCAGCCCCTGGACATCCATCGACCTGCAGGGTT...GGGCCCGTCACCCCAACAGAAACTCCCCCAAACTATATAGACTAGTAGAACATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS-3UTR CCA 90 bp | TATGTTCTACTAGTCTATATAGTTTGGGGGAGTTTCTGTTGGGGTGACGGGCCCTGTTGCAGTAGTCAGTaGCGCAACCACGGACCACCG | + |
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Preference number: 4 (lower is better) Translates to: YVLLVYIVWGSFCWGDGPCCSSQ*RNHGPP Trigger: CGGTGGTCCGTGGTTGCGCCACTGACTACTGCAACA...GGGCCCGTCACCCCAACAGAAACTCCCCCAAACTATATAGACTAGTAGAACATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS-3UTR CCA 90 bp | CAACATCTAGTTATTTCCAAACACCCCGTATTTCCTCTTTTGGTCACTTGTTCCGGCTGGTGGTGCCCATaGTGGTGCAGGAGGGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: QHLVISKHPVFPLLVTCSGWWCP*WCRRAG Trigger: ACCGGCCCTCCTGCACCACCATGGGCACCACCAGCC...GGAACAAGTGACCAAAAGAGGAAATACGGGGTGTTTGGAAATAACTAGATGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS-3UTR TCA 90 bp | CAACATCTAGTTATTTCCAAACACCCCGTATTTCCTCTTTTGGTCACTTGTTCCGTGCAGGAGGGCCGGTaGCAGGTCCGGATGTACACG | + |
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Preference number: 4 (lower is better) Translates to: QHLVISKHPVFPLLVTCSVQEGR*QVRMYT Trigger: CGTGTACATCCGGACCTGTCACCGGCCCTCCTGCAC...GGAACAAGTGACCAAAAGAGGAAATACGGGGTGTTTGGAAATAACTAGATGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS-3UTR CCA 90 bp | AGTTTCTGTTGGGGTGACGGGCCCAAGAAGGACTGCAGTTATATTATAGATTTCTGGTCCTGGTGGCACTaGACCCGTCGGGACTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: SFCWGDGPKKDCSYIIDFWSWWH*TRRDFS Trigger: TGAGAAGTCCCGACGGGTCCAGTGCCACCAGGACCA...GAAATCTATAATATAACTGCAGTCCTTCTTGGGCCCGTCACCCCAACAGAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS-3UTR CCA 90 bp | CTCAGCCTCCTCATTCCATTTGGCTGTTCATATTTATTTGGGTTGTTTCCAGTTGGATTCGGGGAGCTCTaGGAGGGGCCGAGGACATGG | + |
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Preference number: 4 (lower is better) Translates to: LSLLIPFGCSYLFGLFPVGFGEL*EGPRTW Trigger: CCATGTCCTCGGCCCCTCCCAGAGCTCCCCGAATCC...AACTGGAAACAACCCAAATAAATATGAACAGCCAAATGGAATGAGGAGGCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS-3UTR TCA 90 bp | TGGCTAGATCTCAGCCTCCTCATTCCATTTGGCTGTTCATATTTATTTGGGTTGTTGGGGAGGGCGTCGTaGGTCTTGAGGTTGCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: WLDLSLLIPFGCSYLFGLLGRAS*VLRLLL Trigger: CAACAGCAACCTCAAGACTCACGACGCCCTCCCCAA...CAACCCAAATAAATATGAACAGCCAAATGGAATGAGGAGGCTGAGATCTAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS-3UTR CCA 90 bp | CTCAGCCTCCTCATTCCATTTGGCTGTTCATATTTATTTGGGTTGTTTCCAGTTGAGCTTGGCTCAGGTTaGGGAGGGCGTCGTGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: LSLLIPFGCSYLFGLFPVELGSG*GGRRES Trigger: AGACTCACGACGCCCTCCCCAACCTGAGCCAAGCTC...AACTGGAAACAACCCAAATAAATATGAACAGCCAAATGGAATGAGGAGGCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS CCA 90 bp | GGCCCTCGCAGCAGTAACCCTGCAGGTCGATGGATGTCCAGGGGCTaGTGGTGCCCATGGTGGTGCAGGAGGGCCGGTGACAGGTCCGGA | + |
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Preference number: 5 (lower is better) Translates to: GPRSSNPAGRWMSRG*WCPWWCRRAGDRSG Trigger: TCCGGACCTGTCACCGGCCCTCCTGCACCACCATGGGCACCACCAGCCCCTGGACATCCATCGACCTGCAGGGTTACTGCTGCGAGGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS GCA 90 bp | GCAGGGTCAGGATTCGGGGAGCTCTGGGAGGGGCCGAGGACATGGTaGCAGGCAGGATCTGTGTCACCGAGGCCCTGTTGCAGAGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: AGSGFGELWEGPRTW*QAGSVSPRPCCRGG Trigger: GCCACCTCTGCAACAGGGCCTCGGTGACACAGATCCTGCCTGGCACCATGTCCTCGGCCCCTCCCAGAGCTCCCCGAATCCTGACCCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS CCA 90 bp | CGCAACCACGGACCACCGCGTAGTCGGGAGGCAGAGCATCCTGGTTaGTCTGCATGGGGCCGGTGGTGGGGCCTGTCCAGCATCCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: RNHGPPRSREAEHPG*SAWGRWWGLSSILS Trigger: GGAAAGGATGCTGGACAGGCCCCACCACCGGCCCCATGCAGACCAACCAGGATGCTCTGCCTCCCGACTACGCGGTGGTCCGTGGTTGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS CCA 90 bp | AACCCTGCAGGTCGATGGATGTCCAGGGGCTGGTGGTGCCCATGGTaGTGCAGGAGGGCCGGTGACAGGTCCGGATGTACACGGGCACCG | + |
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Preference number: 5 (lower is better) Translates to: NPAGRWMSRGWWCPW*CRRAGDRSGCTRAP Trigger: CGGTGCCCGTGTACATCCGGACCTGTCACCGGCCCTCCTGCACCACCATGGGCACCACCAGCCCCTGGACATCCATCGACCTGCAGGGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS CCA 90 bp | GGACCACCGCGTAGTCGGGAGGCAGAGCATCCTGGTTGGTCTGCATaGGGCCGGTGGTGGGGCCTGTCCAGCATCCTTTCCGGACCATTG | + |
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Preference number: 5 (lower is better) Translates to: GPPRSREAEHPGWSA*GRWWGLSSILSGPL Trigger: CAATGGTCCGGAAAGGATGCTGGACAGGCCCCACCACCGGCCCCATGCAGACCAACCAGGATGCTCTGCCTCCCGACTACGCGGTGGTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS CCA 90 bp | CCTCGCAGCAGTAACCCTGCAGGTCGATGGATGTCCAGGGGCTGGTaGTGCCCATGGTGGTGCAGGAGGGCCGGTGACAGGTCCGGATGT | + |
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Preference number: 5 (lower is better) Translates to: PRSSNPAGRWMSRGW*CPWWCRRAGDRSGC Trigger: ACATCCGGACCTGTCACCGGCCCTCCTGCACCACCATGGGCACCACCAGCCCCTGGACATCCATCGACCTGCAGGGTTACTGCTGCGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS GCA 90 bp | CGCAGCAGTAACCCTGCAGGTCGATGGATGTCCAGGGGCTGGTGGTaGCCATGGTGGTGCAGGAGGGCCGGTGACAGGTCCGGATGTACA | + |
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Preference number: 5 (lower is better) Translates to: RSSNPAGRWMSRGWW*PWWCRRAGDRSGCT Trigger: TGTACATCCGGACCTGTCACCGGCCCTCCTGCACCACCATGGGCACCACCAGCCCCTGGACATCCATCGACCTGCAGGGTTACTGCTGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS CCA 90 bp | AGTAACCCTGCAGGTCGATGGATGTCCAGGGGCTGGTGGTGCCCATaGTGGTGCAGGAGGGCCGGTGACAGGTCCGGATGTACACGGGCA | + |
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Preference number: 5 (lower is better) Translates to: SNPAGRWMSRGWWCP*WCRRAGDRSGCTRA Trigger: TGCCCGTGTACATCCGGACCTGTCACCGGCCCTCCTGCACCACCATGGGCACCACCAGCCCCTGGACATCCATCGACCTGCAGGGTTACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS CCA 90 bp | TCAGCAGGGTCAGGATTCGGGGAGCTCTGGGAGGGGCCGAGGACATaGTGCCAGGCAGGATCTGTGTCACCGAGGCCCTGTTGCAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: SAGSGFGELWEGPRT*CQAGSVSPRPCCRG Trigger: ACCTCTGCAACAGGGCCTCGGTGACACAGATCCTGCCTGGCACCATGTCCTCGGCCCCTCCCAGAGCTCCCCGAATCCTGACCCTGCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS TCA 90 bp | TACACGGGCACCGAGAAGTTGCCAATGTTCATCCGGCCGTTGCCCTaGAAACAGGCGCTCTGGTCCTGGTGGCACTGGACCCGTCGGGAC | + |
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Preference number: 5 (lower is better) Translates to: YTGTEKLPMFIRPLP*KQALWSWWHWTRRD Trigger: GTCCCGACGGGTCCAGTGCCACCAGGACCAGAGCGCCTGTTTTCAGGGCAACGGCCGGATGAACATTGGCAACTTCTCGGTGCCCGTGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS CCA 90 bp | GTGGGTCCCCAAGCAGGCATAGCACTCGGTGCCACTGAGCGTCTGTaGGTTAGGAGCTTGGCTCAGGTTGGGGAGGGCGTCGTGAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: VGPQAGIALGATERL*VRSLAQVGEGVVSL Trigger: AAGACTCACGACGCCCTCCCCAACCTGAGCCAAGCTCCTAACCCACAGACGCTCAGTGGCACCGAGTGCTATGCCTGCTTGGGGACCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS GCA 90 bp | GGATGTACACGGGCACCGAGAAGTTGCCAATGTTCATCCGGCCGTTaGCCTGAAAACAGGCGCTCTGGTCCTGGTGGCACTGGACCCGTC | + |
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Preference number: 5 (lower is better) Translates to: GCTRAPRSCQCSSGR*PENRRSGPGGTGPV Trigger: GACGGGTCCAGTGCCACCAGGACCAGAGCGCCTGTTTTCAGGGCAACGGCCGGATGAACATTGGCAACTTCTCGGTGCCCGTGTACATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS GCA 90 bp | AGGAGGGCCGGTGACAGGTCCGGATGTACACGGGCACCGAGAAGTTaGCAATGTTCATCCGGCCGTTGCCCTGAAAACAGGCGCTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: RRAGDRSGCTRAPRS*QCSSGRCPENRRSG Trigger: ACCAGAGCGCCTGTTTTCAGGGCAACGGCCGGATGAACATTGGCAACTTCTCGGTGCCCGTGTACATCCGGACCTGTCACCGGCCCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS-3UTR CAA 90 bp | CCACATGTAATCCCAGCATCTGTCTGGCAGGTCGAGGTGAGGGGGTCAGGAGTTGGCAGAGCATCCTGGTaGGTCTGCATGGGGCCGGTG | + |
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Preference number: 5 (lower is better) Translates to: PHVIPASVWQVEVRGSGVGRASW*VCMGPV Trigger: CACCGGCCCCATGCAGACCAACCAGGATGCTCTGCC...AACTCCTGACCCCCTCACCTCGACCTGCCAGACAGATGCTGGGATTACATGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS TCA 90 bp | CAGAGCACCCCTCAGGACAAGAGACACTGGGGAGTTTCACAGCGCTaGGGTCGAAGGGCCCGAAGTAGGTGTGCTCGTAGCTGTAGCACT | + |
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Preference number: 5 (lower is better) Translates to: QSTPQDKRHWGVSQR*GRRARSRCARSCST Trigger: AGTGCTACAGCTACGAGCACACCTACTTCGGGCCCTTCGACCTCAGCGCTGTGAAACTCCCCAGTGTCTCTTGTCCTGAGGGGTGCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS CCA 72 bp | GGACCACCGCGTAGTCGGGAGGCAGAGCATCCTGGTTaGTCTGCATGGGGCCGGTGGTGGGGCCTGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: GPPRSREAEHPG*SAWGRWWGLSS Trigger: GCTGGACAGGCCCCACCACCGGCCCCATGCAGACCAACCAGGATGCTCTGCCTCCCGACTACGCGGTGGTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS GCA 72 bp | AACCCTGCAGGTCGATGGATGTCCAGGGGCTGGTGGTaGCCATGGTGGTGCAGGAGGGCCGGTGACAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: NPAGRWMSRGWW*PWWCRRAGDRS Trigger: GGACCTGTCACCGGCCCTCCTGCACCACCATGGGCACCACCAGCCCCTGGACATCCATCGACCTGCAGGGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS GCA 72 bp | GGATTCGGGGAGCTCTGGGAGGGGCCGAGGACATGGTaGCAGGCAGGATCTGTGTCACCGAGGCCCTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: GFGELWEGPRTW*QAGSVSPRPCC Trigger: GCAACAGGGCCTCGGTGACACAGATCCTGCCTGGCACCATGTCCTCGGCCCCTCCCAGAGCTCCCCGAATCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS CCA 72 bp | CGTAGTCGGGAGGCAGAGCATCCTGGTTGGTCTGCATaGGGCCGGTGGTGGGGCCTGTCCAGCATCCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: RSREAEHPGWSA*GRWWGLSSILS Trigger: GGAAAGGATGCTGGACAGGCCCCACCACCGGCCCCATGCAGACCAACCAGGATGCTCTGCCTCCCGACTACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS CCA 72 bp | AGTAACCCTGCAGGTCGATGGATGTCCAGGGGCTGGTaGTGCCCATGGTGGTGCAGGAGGGCCGGTGACAGG | + |
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Preference number: 6 (lower is better) Translates to: SNPAGRWMSRGW*CPWWCRRAGDR Trigger: CCTGTCACCGGCCCTCCTGCACCACCATGGGCACCACCAGCCCCTGGACATCCATCGACCTGCAGGGTTACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS CCA 72 bp | TCAGGATTCGGGGAGCTCTGGGAGGGGCCGAGGACATaGTGCCAGGCAGGATCTGTGTCACCGAGGCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: SGFGELWEGPRT*CQAGSVSPRPC Trigger: ACAGGGCCTCGGTGACACAGATCCTGCCTGGCACCATGTCCTCGGCCCCTCCCAGAGCTCCCCGAATCCTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS CAA 90 bp | GCATGGGGCCGGTGGTGGGGCCTGTCCAGCATCCTTTCCGGACCATaGTCACCAGGCTGCGGTAACCGGTATCCAGCGACAAGACCACCT | + |
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Preference number: 6 (lower is better) Translates to: AWGRWWGLSSILSGP*SPGCGNRYPATRPP Trigger: AGGTGGTCTTGTCGCTGGATACCGGTTACCGCAGCCTGGTGACAATGGTCCGGAAAGGATGCTGGACAGGCCCCACCACCGGCCCCATGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS TCA 72 bp | GAGCTTGGCTCAGGTTGGGGAGGGCGTCGTGAGTCTTaGGGTTGCTGTTGCAGTAGTCAGTGGCGCAACCAC | + |
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Preference number: 6 (lower is better) Translates to: ELGSGWGGRRES*GCCCSSQWRNH Trigger: GTGGTTGCGCCACTGACTACTGCAACAGCAACCTCAAGACTCACGACGCCCTCCCCAACCTGAGCCAAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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| CDS TCA 72 bp | ACCGAGAAGTTGCCAATGTTCATCCGGCCGTTGCCCTaGAAACAGGCGCTCTGGTCCTGGTGGCACTGGACC | + |
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Preference number: 6 (lower is better) Translates to: TEKLPMFIRPLP*KQALWSWWHWT Trigger: GGTCCAGTGCCACCAGGACCAGAGCGCCTGTTTTCAGGGCAACGGCCGGATGAACATTGGCAACTTCTCGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032683.6 |
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