Pregenerated sensors for LYPD4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000062732

Ensembl transcript IDs: ENSMUST00000079306.11, ENSMUST00000122995.2

Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GGTTGTTGCAGAGATAGGACCTGCAGACGCGGCTGTAGGAGGCAATaGACACTCCGGGCGGAGACACGAGGTAGGAGATTTGTGGAGGGT	+
Preference number: 5 (lower is better) Translates to: GCCRDRTCRRGCRRQ*TLRAETRGRRFVEG Trigger: ACCCTCCACAAATCTCCTACCTCGTGTCTCCGCCCGGAGTGTCCATTGCCTCCTACAGCCGCGTCTGCAGGTCCTATCTCTGCAACAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079306.11 ENSMUST00000122995.2
CDS GCA 90 bp	TCACAAAAGGCTCCAGGTTGGTTAGGTTGTTGCAGAGATAGGACCTaGAGACGCGGCTGTAGGAGGCAATGGACACTCCGGGCGGAGACA	+
Preference number: 5 (lower is better) Translates to: SQKAPGWLGCCRDRT*RRGCRRQWTLRAET Trigger: TGTCTCCGCCCGGAGTGTCCATTGCCTCCTACAGCCGCGTCTGCAGGTCCTATCTCTGCAACAACCTAACCAACCTGGAGCCTTTTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079306.11 ENSMUST00000122995.2
CDS CCA 90 bp	GGAGGCAATGGACACTCCGGGCGGAGACACGAGGTAGGAGATTTGTaGAGGGTAAGAAAAGGCGGAGCTGCAGCCTTTGAAACTCAGGAC	+
Preference number: 5 (lower is better) Translates to: GGNGHSGRRHEVGDL*RVRKGGAAAFETQD Trigger: GTCCTGAGTTTCAAAGGCTGCAGCTCCGCCTTTTCTTACCCTCCACAAATCTCCTACCTCGTGTCTCCGCCCGGAGTGTCCATTGCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079306.11 ENSMUST00000122995.2
CDS TCA 90 bp	GTCCCCGTCTCGATGAACACTACGGTCTCCTCGCAGCCCTCTCTCTaGTTGCACACCATGCTCCTCAACAGAAGCCACTTCCAGTTATGC	+
Preference number: 5 (lower is better) Translates to: VPVSMNTTVSSQPSL*LHTMLLNRSHFQLC Trigger: GCATAACTGGAAGTGGCTTCTGTTGAGGAGCATGGTGTGCAATCAGAGAGAGGGCTGCGAGGAGACCGTAGTGTTCATCGAGACGGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079306.11 ENSMUST00000122995.2
CDS CCA 90 bp	GCAAAGGGGCAATTCTCTGTGGTGACAAAGCTTGGAAGACATTCCTaGTCGTGCTTGCCCACGCAGCTTGGACAGCTTTTGGCAGAAGGT	+
Preference number: 5 (lower is better) Translates to: AKGQFSVVTKLGRHS*SCLPTQLGQLLAEG Trigger: ACCTTCTGCCAAAAGCTGTCCAAGCTGCGTGGGCAAGCACGACCAGGAATGTCTTCCAAGCTTTGTCACCACAGAGAATTGCCCCTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079306.11
CDS TCA 90 bp	CAACAGAAGCCACTTCCAGTTATGCAAGGACACGGCTCTGAAGGCTaGTGCTGTCGCCTCATAGCACAGAAGAGCTTCAGTACAAGGCAG	+
Preference number: 5 (lower is better) Translates to: QQKPLPVMQGHGSEG*CCRLIAQKSFSTRQ Trigger: CTGCCTTGTACTGAAGCTCTTCTGTGCTATGAGGCGACAGCATCAGCCTTCAGAGCCGTGTCCTTGCATAACTGGAAGTGGCTTCTGTTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079306.11 ENSMUST00000122995.2
CDS TCA 90 bp	TGCTCCTCAACAGAAGCCACTTCCAGTTATGCAAGGACACGGCTCTaGAGGCTGATGCTGTCGCCTCATAGCACAGAAGAGCTTCAGTAC	+
Preference number: 5 (lower is better) Translates to: CSSTEATSSYARTRL*RLMLSPHSTEELQY Trigger: GTACTGAAGCTCTTCTGTGCTATGAGGCGACAGCATCAGCCTTCAGAGCCGTGTCCTTGCATAACTGGAAGTGGCTTCTGTTGAGGAGCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079306.11 ENSMUST00000122995.2
CDS TCA 90 bp	ACGCAGCTTGGACAGCTTTTGGCAGAAGGTAGTGTGGACATGGGTTaGCTGGCCTTGAGTCTCACAAAAGGCTCCAGGTTGGTTAGGTTG	+
Preference number: 5 (lower is better) Translates to: TQLGQLLAEGSVDMG*LALSLTKGSRLVRL Trigger: CAACCTAACCAACCTGGAGCCTTTTGTGAGACTCAAGGCCAGTCAACCCATGTCCACACTACCTTCTGCCAAAAGCTGTCCAAGCTGCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079306.11
CDS TCA 90 bp	TGGAACTGTAACATGAGGAAGCAGCAAAGGGGCAATTCTCTGTGGTaGCAAAGCTTGGAAGACATTCCTGGTCGTGCTTGCCCACGCAGC	+
Preference number: 5 (lower is better) Translates to: WNCNMRKQQRGNSLW*QSLEDIPGRACPRS Trigger: GCTGCGTGGGCAAGCACGACCAGGAATGTCTTCCAAGCTTTGTCACCACAGAGAATTGCCCCTTTGCTGCTTCCTCATGTTACAGTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079306.11
CDS CCA 90 bp	TCGCCTCATAGCACAGAAGAGCTTCAGTACAAGGCAGTAAAGAGATaGCTTCTAAGAGGTACAGCAGCTGCAGAGATCTCCAGGCCTGCA	+
Preference number: 5 (lower is better) Translates to: SPHSTEELQYKAVKR*LLRGTAAAEISRPA Trigger: TGCAGGCCTGGAGATCTCTGCAGCTGCTGTACCTCTTAGAAGCCATCTCTTTACTGCCTTGTACTGAAGCTCTTCTGTGCTATGAGGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079306.11 ENSMUST00000122995.2
CDS TCA 90 bp	GACAGCTTTTGGCAGAAGGTAGTGTGGACATGGGTTGACTGGCCTTaGGTCTCACAAAAGGCTCCAGGTTGGTTAGGTTGTTGCAGAGAT	+
Preference number: 5 (lower is better) Translates to: DSFWQKVVWTWVDWP*VSQKAPGWLGCCRD Trigger: ATCTCTGCAACAACCTAACCAACCTGGAGCCTTTTGTGAGACTCAAGGCCAGTCAACCCATGTCCACACTACCTTCTGCCAAAAGCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079306.11
CDS TCA 90 bp	TCTAGGACATTGATGACCTCAGTCACTCGGATGCTCCCAATGTGCTaGAAATCTGCTAAAAGCTTGTGTGAGTCACGAGCACAGCCCATG	+
Preference number: 5 (lower is better) Translates to: SRTLMTSVTRMLPMC*KSAKSLCESRAQPM Trigger: CATGGGCTGTGCTCGTGACTCACACAAGCTTTTAGCAGATTTTCAGCACATTGGGAGCATCCGAGTGACTGAGGTCATCAATGTCCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079306.11
CDS GCA 72 bp	GCTCCAGGTTGGTTAGGTTGTTGCAGAGATAGGACCTaGAGACGCGGCTGTAGGAGGCAATGGACACTCCGG	+
Preference number: 6 (lower is better) Translates to: APGWLGCCRDRT*RRGCRRQWTLR Trigger: CCGGAGTGTCCATTGCCTCCTACAGCCGCGTCTGCAGGTCCTATCTCTGCAACAACCTAACCAACCTGGAGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079306.11 ENSMUST00000122995.2
CDS CCA 72 bp	AGAGATAGGACCTGCAGACGCGGCTGTAGGAGGCAATaGACACTCCGGGCGGAGACACGAGGTAGGAGATTT	+
Preference number: 6 (lower is better) Translates to: RDRTCRRGCRRQ*TLRAETRGRRF Trigger: AAATCTCCTACCTCGTGTCTCCGCCCGGAGTGTCCATTGCCTCCTACAGCCGCGTCTGCAGGTCCTATCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079306.11 ENSMUST00000122995.2
CDS CCA 72 bp	CCTGGTCGTGCTTGCCCACGCAGCTTGGACAGCTTTTaGCAGAAGGTAGTGTGGACATGGGTTGACTGGCCT	+
Preference number: 6 (lower is better) Translates to: PGRACPRSLDSF*QKVVWTWVDWP Trigger: AGGCCAGTCAACCCATGTCCACACTACCTTCTGCCAAAAGCTGTCCAAGCTGCGTGGGCAAGCACGACCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079306.11
CDS CAA 90 bp	GTAGGAGGCAATGGACACTCCGGGCGGAGACACGAGGTAGGAGATTaGTGGAGGGTAAGAAAAGGCGGAGCTGCAGCCTTTGAAACTCAG	+
Preference number: 6 (lower is better) Translates to: VGGNGHSGRRHEVGD*WRVRKGGAAAFETQ Trigger: CTGAGTTTCAAAGGCTGCAGCTCCGCCTTTTCTTACCCTCCACAAATCTCCTACCTCGTGTCTCCGCCCGGAGTGTCCATTGCCTCCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079306.11 ENSMUST00000122995.2
CDS GCA 72 bp	CACACCATGCTCCTCAACAGAAGCCACTTCCAGTTATaGAAGGACACGGCTCTGAAGGCTGATGCTGTCGCC	+
Preference number: 6 (lower is better) Translates to: HTMLLNRSHFQL*KDTALKADAVA Trigger: GGCGACAGCATCAGCCTTCAGAGCCGTGTCCTTGCATAACTGGAAGTGGCTTCTGTTGAGGAGCATGGTGTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079306.11 ENSMUST00000122995.2
CDS GCA 72 bp	CGGTCTCCTCGCAGCCCTCTCTCTGATTGCACACCATaGTCCTCAACAGAAGCCACTTCCAGTTATGCAAGG	+
Preference number: 6 (lower is better) Translates to: RSPRSPLSDCTP*SSTEATSSYAR Trigger: CCTTGCATAACTGGAAGTGGCTTCTGTTGAGGAGCATGGTGTGCAATCAGAGAGAGGGCTGCGAGGAGACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079306.11 ENSMUST00000122995.2
CDS CAA 72 bp	AATGGACACTCCGGGCGGAGACACGAGGTAGGAGATTaGTGGAGGGTAAGAAAAGGCGGAGCTGCAGCCTTT	+
Preference number: 6 (lower is better) Translates to: NGHSGRRHEVGD*WRVRKGGAAAF Trigger: AAAGGCTGCAGCTCCGCCTTTTCTTACCCTCCACAAATCTCCTACCTCGTGTCTCCGCCCGGAGTGTCCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079306.11 ENSMUST00000122995.2
CDS TCA 72 bp	TCGATGAACACTACGGTCTCCTCGCAGCCCTCTCTCTaGTTGCACACCATGCTCCTCAACAGAAGCCACTTC	+
Preference number: 6 (lower is better) Translates to: SMNTTVSSQPSL*LHTMLLNRSHF Trigger: GAAGTGGCTTCTGTTGAGGAGCATGGTGTGCAATCAGAGAGAGGGCTGCGAGGAGACCGTAGTGTTCATCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079306.11 ENSMUST00000122995.2
CDS TCA 72 bp	TTTGTGGAGGGTAAGAAAAGGCGGAGCTGCAGCCTTTaGAACTCAGGACTCCCTTACTGGTCCCCGTCTCGA	+
Preference number: 6 (lower is better) Translates to: FVEGKKRRSCSL*NSGLPYWSPSR Trigger: TCGAGACGGGGACCAGTAAGGGAGTCCTGAGTTTCAAAGGCTGCAGCTCCGCCTTTTCTTACCCTCCACAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079306.11 ENSMUST00000122995.2
CDS CCA 72 bp	AGCAGCAAAGGGGCAATTCTCTGTGGTGACAAAGCTTaGAAGACATTCCTGGTCGTGCTTGCCCACGCAGCT	+
Preference number: 6 (lower is better) Translates to: SSKGAILCGDKA*KTFLVVLAHAA Trigger: AGCTGCGTGGGCAAGCACGACCAGGAATGTCTTCCAAGCTTTGTCACCACAGAGAATTGCCCCTTTGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079306.11
CDS CAA 72 bp	GTGGTGACAAAGCTTGGAAGACATTCCTGGTCGTGCTaGCCCACGCAGCTTGGACAGCTTTTGGCAGAAGGT	+
Preference number: 6 (lower is better) Translates to: VVTKLGRHSWSC*PTQLGQLLAEG Trigger: ACCTTCTGCCAAAAGCTGTCCAAGCTGCGTGGGCAAGCACGACCAGGAATGTCTTCCAAGCTTTGTCACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079306.11
CDS CAA 72 bp	TGCCCTGCACTGACAGCCTCGGACTTATCTAGGACATaGATGACCTCAGTCACTCGGATGCTCCCAATGTGC	+
Preference number: 6 (lower is better) Translates to: CPALTASDLSRT*MTSVTRMLPMC Trigger: GCACATTGGGAGCATCCGAGTGACTGAGGTCATCAATGTCCTAGATAAGTCCGAGGCTGTCAGTGCAGGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079306.11
CDS TCA 72 bp	CCACTTCCAGTTATGCAAGGACACGGCTCTGAAGGCTaGTGCTGTCGCCTCATAGCACAGAAGAGCTTCAGT	+
Preference number: 6 (lower is better) Translates to: PLPVMQGHGSEG*CCRLIAQKSFS Trigger: ACTGAAGCTCTTCTGTGCTATGAGGCGACAGCATCAGCCTTCAGAGCCGTGTCCTTGCATAACTGGAAGTGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079306.11 ENSMUST00000122995.2
CDS TCA 72 bp	ACAGAAGCCACTTCCAGTTATGCAAGGACACGGCTCTaGAGGCTGATGCTGTCGCCTCATAGCACAGAAGAG	+
Preference number: 6 (lower is better) Translates to: TEATSSYARTRL*RLMLSPHSTEE Trigger: CTCTTCTGTGCTATGAGGCGACAGCATCAGCCTTCAGAGCCGTGTCCTTGCATAACTGGAAGTGGCTTCTGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079306.11 ENSMUST00000122995.2
CDS TCA 72 bp	GGACAGCTTTTGGCAGAAGGTAGTGTGGACATGGGTTaGCTGGCCTTGAGTCTCACAAAAGGCTCCAGGTTG	+
Preference number: 6 (lower is better) Translates to: GQLLAEGSVDMG*LALSLTKGSRL Trigger: CAACCTGGAGCCTTTTGTGAGACTCAAGGCCAGTCAACCCATGTCCACACTACCTTCTGCCAAAAGCTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079306.11
CDS CAA 90 bp	CAATTCTCTGTGGTGACAAAGCTTGGAAGACATTCCTGGTCGTGCTaGCCCACGCAGCTTGGACAGCTTTTGGCAGAAGGTAGTGTGGAC	+
Preference number: 6 (lower is better) Translates to: QFSVVTKLGRHSWSC*PTQLGQLLAEGSVD Trigger: GTCCACACTACCTTCTGCCAAAAGCTGTCCAAGCTGCGTGGGCAAGCACGACCAGGAATGTCTTCCAAGCTTTGTCACCACAGAGAATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079306.11
CDS TCA 72 bp	TGGCAGAAGGTAGTGTGGACATGGGTTGACTGGCCTTaGGTCTCACAAAAGGCTCCAGGTTGGTTAGGTTGT	+
Preference number: 6 (lower is better) Translates to: WQKVVWTWVDWP*VSQKAPGWLGC Trigger: ACAACCTAACCAACCTGGAGCCTTTTGTGAGACTCAAGGCCAGTCAACCCATGTCCACACTACCTTCTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079306.11
CDS CCA 72 bp	CAATTCTCTGTGGTGACAAAGCTTGGAAGACATTCCTaGTCGTGCTTGCCCACGCAGCTTGGACAGCTTTTG	+
Preference number: 6 (lower is better) Translates to: QFSVVTKLGRHS*SCLPTQLGQLL Trigger: CAAAAGCTGTCCAAGCTGCGTGGGCAAGCACGACCAGGAATGTCTTCCAAGCTTTGTCACCACAGAGAATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079306.11
CDS TCA 72 bp	AACATGAGGAAGCAGCAAAGGGGCAATTCTCTGTGGTaGCAAAGCTTGGAAGACATTCCTGGTCGTGCTTGC	+
Preference number: 6 (lower is better) Translates to: NMRKQQRGNSLW*QSLEDIPGRAC Trigger: GCAAGCACGACCAGGAATGTCTTCCAAGCTTTGTCACCACAGAGAATTGCCCCTTTGCTGCTTCCTCATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079306.11
CDS CCA 72 bp	AGCACAGAAGAGCTTCAGTACAAGGCAGTAAAGAGATaGCTTCTAAGAGGTACAGCAGCTGCAGAGATCTCC	+
Preference number: 6 (lower is better) Translates to: STEELQYKAVKR*LLRGTAAAEIS Trigger: GGAGATCTCTGCAGCTGCTGTACCTCTTAGAAGCCATCTCTTTACTGCCTTGTACTGAAGCTCTTCTGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079306.11 ENSMUST00000122995.2
CDS TCA 72 bp	TTGATGACCTCAGTCACTCGGATGCTCCCAATGTGCTaGAAATCTGCTAAAAGCTTGTGTGAGTCACGAGCA	+
Preference number: 6 (lower is better) Translates to: LMTSVTRMLPMC*KSAKSLCESRA Trigger: TGCTCGTGACTCACACAAGCTTTTAGCAGATTTTCAGCACATTGGGAGCATCCGAGTGACTGAGGTCATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079306.11

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