Pregenerated sensors for LYPD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057454Ensembl transcript IDs: ENSMUST00000080718.6
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGATTTCCGCACAATGTGCCAGGCAAGCACAGTGCTCGGAGGATaGATCCATTGTCTACCTGCCTGGTCATCTTCCAGCCTGGTCAGG | + |
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Preference number: 1 (lower is better) Translates to: PDFRTMCQASTVLGG*IHCLPAWSSSSLVR Trigger: CCTGACCAGGCTGGAAGATGACCAGGCAGGTAGACAATGGATCCATCCTCCGAGCACTGTGCTTGCCTGGCACATTGTGCGGAAATCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| 3UTR GCA 90 bp | AAGACAGGCGACCAGATTTCCGCACAATGTGCCAGGCAAGCACAGTaGTCGGAGGATGGATCCATTGTCTACCTGCCTGGTCATCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: KTGDQISAQCARQAQ*SEDGSIVYLPGHLP Trigger: TGGAAGATGACCAGGCAGGTAGACAATGGATCCATCCTCCGAGCACTGTGCTTGCCTGGCACATTGTGCGGAAATCTGGTCGCCTGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| 3UTR TCA 90 bp | GAACTGAGAATGCTGAAGGATGGGGGCGGAGCCAGTCCAGTCAAGTaGGAAATGGAAAGAGTTGGTACCACGGGGCCAGGGAAACAAAGT | + |
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Preference number: 1 (lower is better) Translates to: ELRMLKDGGGASPVK*EMERVGTTGPGKQS Trigger: ACTTTGTTTCCCTGGCCCCGTGGTACCAACTCTTTCCATTTCTCACTTGACTGGACTGGCTCCGCCCCCATCCTTCAGCATTCTCAGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| 3UTR CAA 90 bp | CCGCACAATGTGCCAGGCAAGCACAGTGCTCGGAGGATGGATCCATaGTCTACCTGCCTGGTCATCTTCCAGCCTGGTCAGGAAAACGGG | + |
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Preference number: 2 (lower is better) Translates to: PHNVPGKHSARRMDP*STCLVIFQPGQENG Trigger: CCCGTTTTCCTGACCAGGCTGGAAGATGACCAGGCAGGTAGACAATGGATCCATCCTCCGAGCACTGTGCTTGCCTGGCACATTGTGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| 3UTR-3UTR TCA 90 bp | CTGGTCAGGAAAACGGGAAGAGGAGGCTTGCCGTGGACTCTCTGGGCCTCTCTCGCCAGTCCAGTCAAGTaGGAAATGGAAAGAGTTGGT | + |
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Preference number: 2 (lower is better) Translates to: LVRKTGRGGLPWTLWASLASPVK*EMERVG Trigger: ACCAACTCTTTCCATTTCTCACTTGACTGGACTGGC...GAGAGAGGCCCAGAGAGTCCACGGCAAGCCTCCTCTTCCCGTTTTCCTGACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| 3UTR-3UTR CCA 90 bp | CGGAGGATGGATCCATTGTCTACCTGCCTGGTCATCTTCCAGCCTGGTCAGGAACTCTTCCCTCTGTCCTaGTCACCATCAGGGGGAATG | + |
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Preference number: 2 (lower is better) Translates to: RRMDPLSTCLVIFQPGQELFPLS*SPSGGM Trigger: CATTCCCCCTGATGGTGACCAGGACAGAGGGAAGAG...TTCCTGACCAGGCTGGAAGATGACCAGGCAGGTAGACAATGGATCCATCCTCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| 3UTR-3UTR GCA 90 bp | TCTCTGGGCCTCTCTCAGCCAGTAGACGTCTCTTCCCTCTGTCCTGGTCACCATACTGTTTTCCGAAGCTaGAAACCAGTGCAGTCGGAA | + |
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Preference number: 2 (lower is better) Translates to: SLGLSQPVDVSSLCPGHHTVFRS*KPVQSE Trigger: TTCCGACTGCACTGGTTTGCAGCTTCGGAAAACAGT...ATGGTGACCAGGACAGAGGGAAGAGACGTCTACTGGCTGAGAGAGGCCCAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| 3UTR-3UTR CCA 90 bp | CTACCTGCCTGGTCATCTTCCAGCCTGGTCAGGAAAACGGGAAGAGGAGGCTTGCAGTCAAGTGAGAAATaGAAAGAGTTGGTACCACGG | + |
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Preference number: 2 (lower is better) Translates to: LPAWSSSSLVRKTGRGGLQSSEK*KELVPR Trigger: CCGTGGTACCAACTCTTTCCATTTCTCACTTGACTG...CAAGCCTCCTCTTCCCGTTTTCCTGACCAGGCTGGAAGATGACCAGGCAGGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| 3UTR-3UTR CCA 90 bp | TGGTCAGGAAAACGGGAAGAGGAGGCTTGCCGTGGACTCTCTGGGCCTCTCTCAGGAAACAAAGTGAGATaGACTTTTCGAGATGAGACA | + |
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Preference number: 2 (lower is better) Translates to: WSGKREEEACRGLSGPLSGNKVR*TFRDET Trigger: TGTCTCATCTCGAAAAGTCCATCTCACTTTGTTTCC...TGAGAGAGGCCCAGAGAGTCCACGGCAAGCCTCCTCTTCCCGTTTTCCTGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| 3UTR GCA 72 bp | CTTCCAGCCTGGTCAGGAAAACGGGAAGAGGAGGCTTaGCGTGGACTCTCTGGGCCTCTCTCAGCCAGTAGA | + |
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Preference number: 3 (lower is better) Translates to: LPAWSGKREEEA*RGLSGPLSASR Trigger: TCTACTGGCTGAGAGAGGCCCAGAGAGTCCACGGCAAGCCTCCTCTTCCCGTTTTCCTGACCAGGCTGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| 3UTR CCA 72 bp | CCTCTCTCAGCCAGTAGACGTCTCTTCCCTCTGTCCTaGTCACCATCAGGGGGAATGCTGTGGCCGCATCAA | + |
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Preference number: 3 (lower is better) Translates to: PLSASRRLFPLS*SPSGGMLWPHQ Trigger: TTGATGCGGCCACAGCATTCCCCCTGATGGTGACCAGGACAGAGGGAAGAGACGTCTACTGGCTGAGAGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| 3UTR CCA 72 bp | GGATCCATTGTCTACCTGCCTGGTCATCTTCCAGCCTaGTCAGGAAAACGGGAAGAGGAGGCTTGCCGTGGA | + |
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Preference number: 3 (lower is better) Translates to: GSIVYLPGHLPA*SGKREEEACRG Trigger: TCCACGGCAAGCCTCCTCTTCCCGTTTTCCTGACCAGGCTGGAAGATGACCAGGCAGGTAGACAATGGATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| 3UTR CCA 72 bp | CGCACAATGTGCCAGGCAAGCACAGTGCTCGGAGGATaGATCCATTGTCTACCTGCCTGGTCATCTTCCAGC | + |
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Preference number: 3 (lower is better) Translates to: RTMCQASTVLGG*IHCLPAWSSSS Trigger: GCTGGAAGATGACCAGGCAGGTAGACAATGGATCCATCCTCCGAGCACTGTGCTTGCCTGGCACATTGTGCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| 3UTR GCA 72 bp | GACCAGATTTCCGCACAATGTGCCAGGCAAGCACAGTaGTCGGAGGATGGATCCATTGTCTACCTGCCTGGT | + |
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Preference number: 3 (lower is better) Translates to: DQISAQCARQAQ*SEDGSIVYLPG Trigger: ACCAGGCAGGTAGACAATGGATCCATCCTCCGAGCACTGTGCTTGCCTGGCACATTGTGCGGAAATCTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR GCA 90 bp | AGACAGGCGACCAGATTTCCGCACAATGTGCCAGGCAAGCACAGTGCTCGGAGGCCGAGTGGATGGGGCTaGGGTGGTTGGAGGGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: RQATRFPHNVPGKHSARRPSGWG*GGWRGQ Trigger: CTGCCCCCTCCAACCACCGCAGCCCCATCCACTCGG...CCTCCGAGCACTGTGCTTGCCTGGCACATTGTGCGGAAATCTGGTCGCCTGTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR CCA 90 bp | GCCTGGTCATCTTCCAGCCTGGTCAGGAAAACGGGAAGAGGAGGCTTGCCGTGGAGTTCTGGGCCCGAGTaGATGGGGCTGCGGTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: AWSSSSLVRKTGRGGLPWSSGPE*MGLRWL Trigger: CAACCACCGCAGCCCCATCCACTCGGGCCCAGAACT...CCACGGCAAGCCTCCTCTTCCCGTTTTCCTGACCAGGCTGGAAGATGACCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR TCA 90 bp | GCCTGGTCATCTTCCAGCCTGGTCAGGAAAACGGGAAGAGGAGGCTTGCCGTGGCCCCGGGACCACATTTaGCTGTCTTCATCCTGTGCG | + |
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Preference number: 4 (lower is better) Translates to: AWSSSSLVRKTGRGGLPWPRDHI*LSSSCA Trigger: CGCACAGGATGAAGACAGTCAAATGTGGTCCCGGGG...CCACGGCAAGCCTCCTCTTCCCGTTTTCCTGACCAGGCTGGAAGATGACCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR CCA 90 bp | GCGACCAGATTTCCGCACAATGTGCCAGGCAAGCACAGTGCTCGGAGGATGGATTTGCTGCGGTCTTGGTaGCCCGCAGCACCTCCATGG | + |
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Preference number: 4 (lower is better) Translates to: ATRFPHNVPGKHSARRMDLLRSW*PAAPPW Trigger: CCATGGAGGTGCTGCGGGCCACCAAGACCGCAGCAA...ATCCATCCTCCGAGCACTGTGCTTGCCTGGCACATTGTGCGGAAATCTGGTCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR CCA 90 bp | TGGATCCATTGTCTACCTGCCTGGTCATCTTCCAGCCTGGTCAGGAAAACGGGAGGCGGCATGGAGCCCTaGCACTTCTCGCGGCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: WIHCLPAWSSSSLVRKTGGGMEP*HFSRLR Trigger: TCTGAGCCGCGAGAAGTGCCAGGGCTCCATGCCGCC...TCCCGTTTTCCTGACCAGGCTGGAAGATGACCAGGCAGGTAGACAATGGATCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR CCA 90 bp | AGACAGGCGACCAGATTTCCGCACAATGTGCCAGGCAAGCACAGTGCTCGGAGGCCTTTAGCTGGGATCTaGGCCCCACCCTTTCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: RQATRFPHNVPGKHSARRPLAGI*APPFPG Trigger: TCCAGGAAAGGGTGGGGCCCAGATCCCAGCTAAAGG...CCTCCGAGCACTGTGCTTGCCTGGCACATTGTGCGGAAATCTGGTCGCCTGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR CCA 90 bp | GCCTGGTCATCTTCCAGCCTGGTCAGGAAAACGGGAAGAGGAGGCTTGCCGTGGTGTAGACACGGCCACTaGCGTTGTAGCAGTTCACGA | + |
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Preference number: 4 (lower is better) Translates to: AWSSSSLVRKTGRGGLPWCRHGH*RCSSSR Trigger: TCGTGAACTGCTACAACGCCAGTGGCCGTGTCTACA...CCACGGCAAGCCTCCTCTTCCCGTTTTCCTGACCAGGCTGGAAGATGACCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR CCA 90 bp | TGGATCCATTGTCTACCTGCCTGGTCATCTTCCAGCCTGGTCAGGAAAACGGGAGTGCTGGAGGAGTTCTaGGCCCGAGTGGATGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: WIHCLPAWSSSSLVRKTGVLEEF*ARVDGA Trigger: AGCCCCATCCACTCGGGCCCAGAACTCCTCCAGCAC...TCCCGTTTTCCTGACCAGGCTGGAAGATGACCAGGCAGGTAGACAATGGATCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR CCA 90 bp | TCTCTGGGCCTCTCTCAGCCAGTAGACGTCTCTTCCCTCTGTCCTGGTCACCATATATTGCTGCGGTCTTaGTGGCCCGCAGCACCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SLGLSQPVDVSSLCPGHHILLRS*WPAAPP Trigger: TGGAGGTGCTGCGGGCCACCAAGACCGCAGCAATAT...ATGGTGACCAGGACAGAGGGAAGAGACGTCTACTGGCTGAGAGAGGCCCAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR CCA 90 bp | TCTCTGGGCCTCTCTCAGCCAGTAGACGTCTCTTCCCTCTGTCCTGGTCACCATAGAGCCTCCTTTAGCTaGGATCTGGGCCCCACCCTT | + |
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Preference number: 4 (lower is better) Translates to: SLGLSQPVDVSSLCPGHHRASFS*DLGPTL Trigger: AAGGGTGGGGCCCAGATCCCAGCTAAAGGAGGCTCT...ATGGTGACCAGGACAGAGGGAAGAGACGTCTACTGGCTGAGAGAGGCCCAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| 3UTR CAA 72 bp | GTGCCAGGCAAGCACAGTGCTCGGAGGATGGATCCATaGTCTACCTGCCTGGTCATCTTCCAGCCTGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: VPGKHSARRMDP*STCLVIFQPGQ Trigger: CTGACCAGGCTGGAAGATGACCAGGCAGGTAGACAATGGATCCATCCTCCGAGCACTGTGCTTGCCTGGCAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR TCA 90 bp | CAAGCACAGTGCTCGGAGGATGGATCCATTGTCTACCTGCCTGGTCATCTTCCAGAGCACTGCTGTAGCTaGAAGAAGGCCAGGAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: QAQCSEDGSIVYLPGHLPEHCCS*KKARSP Trigger: CGGGCTCCTGGCCTTCTTTCAGCTACAGCAGTGCTC...TGGAAGATGACCAGGCAGGTAGACAATGGATCCATCCTCCGAGCACTGTGCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR CCA 90 bp | AGGGCCACCCGAGCGGAATATTTACAACAGAGGACTGTTTTCCGAAGCTGCAAATGGATGGGGCTGCGGTaGTTGGAGGGGGCAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: RATRAEYLQQRTVFRSCKWMGLR*LEGAAG Trigger: TCCTGCTGCCCCCTCCAACCACCGCAGCCCCATCCA...TTTGCAGCTTCGGAAAACAGTCCTCTGTTGTAAATATTCCGCTCGGGTGGCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR CCA 90 bp | TGGATCCATTGTCTACCTGCCTGGTCATCTTCCAGCCTGGTCAGGAAAACGGGAGGAGGTGGTCGTGGTTaGGGCTGCTGTAGAGGTCGT | + |
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Preference number: 4 (lower is better) Translates to: WIHCLPAWSSSSLVRKTGGGGRG*GCCRGR Trigger: ACGACCTCTACAGCAGCCCCAACCACGACCACCTCC...TCCCGTTTTCCTGACCAGGCTGGAAGATGACCAGGCAGGTAGACAATGGATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR CCA 90 bp | GAGCCAGTCCAGTCAAGTGAGAAATGGAAAGAGTTGGTACCACGGGGCCAGGGAGAAGTGTGGCTGGCTTaGGCTGTGGTGGGCTTGATG | + |
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Preference number: 4 (lower is better) Translates to: EPVQSSEKWKELVPRGQGEVWLA*AVVGLM Trigger: CATCAAGCCCACCACAGCCCAAGCCAGCCACACTTC...TCCCTGGCCCCGTGGTACCAACTCTTTCCATTTCTCACTTGACTGGACTGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR GCA 90 bp | GCGACCAGATTTCCGCACAATGTGCCAGGCAAGCACAGTGCTCGGAGGATGGATACTGTCTTCATCCTGTaGGGAGAGCATCCATCGTCC | + |
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Preference number: 4 (lower is better) Translates to: ATRFPHNVPGKHSARRMDTVFIL*GEHPSS Trigger: GGACGATGGATGCTCTCCGCACAGGATGAAGACAGT...ATCCATCCTCCGAGCACTGTGCTTGCCTGGCACATTGTGCGGAAATCTGGTCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR CCA 90 bp | TGGATCCATTGTCTACCTGCCTGGTCATCTTCCAGCCTGGTCAGGAAAACGGGATCATGGGGAGAAGTGTaGCTGGCTTGGGCTGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: WIHCLPAWSSSSLVRKTGSWGEV*LAWAVV Trigger: CACCACAGCCCAAGCCAGCCACACTTCTCCCCATGA...TCCCGTTTTCCTGACCAGGCTGGAAGATGACCAGGCAGGTAGACAATGGATCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR TCA 90 bp | ACAACAGAGGACTGTTTTCCGAAGCTGCAAACCAGTGCAGTCGGAACTGAGAATTTACAGCGGGGGCCCTaGCAGCAAGAGCCGCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: TTEDCFPKLQTSAVGTENLQRGP*QQEPLS Trigger: ACTCAGCGGCTCTTGCTGTCAGGGCCCCCGCTGTAA...ATTCTCAGTTCCGACTGCACTGGTTTGCAGCTTCGGAAAACAGTCCTCTGTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR GCA 90 bp | TCCAGTCAAGTGAGAAATGGAAAGAGTTGGTACCACGGGGCCAGGGAAACAAAGGGTCGTGGTTGGGGCTaGTGTAGAGGTCGTGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: SSQVRNGKSWYHGARETKGRGWG*CRGRAG Trigger: TCCAGCACGACCTCTACAGCAGCCCCAACCACGACC...CTTTGTTTCCCTGGCCCCGTGGTACCAACTCTTTCCATTTCTCACTTGACTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR CCA 90 bp | GAAGACAGGCGACCAGATTTCCGCACAATGTGCCAGGCAAGCACAGTGCTCGGAGGCCCCACCCTTTCCTaGATACTTCTCCATATTGCT | + |
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Preference number: 4 (lower is better) Translates to: EDRRPDFRTMCQASTVLGGPTLS*ILLHIA Trigger: AGCAATATGGAGAAGTATCCAGGAAAGGGTGGGGCC...TCCGAGCACTGTGCTTGCCTGGCACATTGTGCGGAAATCTGGTCGCCTGTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| 3UTR CAA 72 bp | GCGGAGCCAGTCCAGTCAAGTGAGAAATGGAAAGAGTaGGTACCACGGGGCCAGGGAAACAAAGTGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: AEPVQSSEKWKE*VPRGQGNKVRW Trigger: CCATCTCACTTTGTTTCCCTGGCCCCGTGGTACCAACTCTTTCCATTTCTCACTTGACTGGACTGGCTCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR GCA 90 bp | AGGGCCACCCGAGCGGAATATTTACAACAGAGGACTGTTTTCCGAAGCTGCAAAACAGCTGTAGCACTCTaGACCGTTAGGCTCATATGC | + |
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Preference number: 4 (lower is better) Translates to: RATRAEYLQQRTVFRSCKTAVAL*TVRLIC Trigger: GCATATGAGCCTAACGGTGCAGAGTGCTACAGCTGT...TTTGCAGCTTCGGAAAACAGTCCTCTGTTGTAAATATTCCGCTCGGGTGGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR CCA 90 bp | CACATAGAGAGGCCAGAGACAAGACCCTGTTGTAGAGTTGTTCACAGTCTCCTAGGTGGTCCACATCACTaGCTGTGTATCTCCTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: HIERPETRPCCRVVHSLLGGPHH*LCISSP Trigger: AGGAGAGGAGATACACAGCCAGTGATGTGGACCACC...TAGGAGACTGTGAACAACTCTACAACAGGGTCTTGTCTCTGGCCTCTCTATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR GCA 90 bp | AGGACTGTTTTCCGAAGCTGCAAACCAGTGCAGTCGGAACTGAGAATGCTGAAGAGAAATAGGTCTTGTTaGGAAGGTCGGCGTTACAGC | + |
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Preference number: 4 (lower is better) Translates to: RTVFRSCKPVQSELRMLKRNRSC*EGRRYS Trigger: GCTGTAACGCCGACCTTCGCAACAAGACCTATTTCT...CTTCAGCATTCTCAGTTCCGACTGCACTGGTTTGCAGCTTCGGAAAACAGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS CCA 90 bp | TTCCGGAACCGCAGCCCCGCACCGCCACAGAGAATTGCCCGTGGATaGTCTCTACCGCTCCCACGGCCTCGGTACAGACGTCCACCCCGG | + |
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Preference number: 5 (lower is better) Translates to: FRNRSPAPPQRIARG*SLPLPRPRYRRPPR Trigger: CCGGGGTGGACGTCTGTACCGAGGCCGTGGGAGCGGTAGAGACCATCCACGGGCAATTCTCTGTGGCGGTGCGGGGCTGCGGTTCCGGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS GCA 90 bp | TTGCCCGGGATTCCGGAACCGCAGCCCCGCACCGCCACAGAGAATTaGCCGTGGATGGTCTCTACCGCTCCCACGGCCTCGGTACAGACG | + |
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Preference number: 5 (lower is better) Translates to: LPGIPEPQPRTATEN*PWMVSTAPTASVQT Trigger: CGTCTGTACCGAGGCCGTGGGAGCGGTAGAGACCATCCACGGGCAATTCTCTGTGGCGGTGCGGGGCTGCGGTTCCGGAATCCCGGGCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS CCA 90 bp | GGGATTCCGGAACCGCAGCCCCGCACCGCCACAGAGAATTGCCCGTaGATGGTCTCTACCGCTCCCACGGCCTCGGTACAGACGTCCACC | + |
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Preference number: 5 (lower is better) Translates to: GIPEPQPRTATENCP*MVSTAPTASVQTST Trigger: GGTGGACGTCTGTACCGAGGCCGTGGGAGCGGTAGAGACCATCCACGGGCAATTCTCTGTGGCGGTGCGGGGCTGCGGTTCCGGAATCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS CCA 90 bp | GTTACAGCGGGGGCCCTGACAGCAAGAGCCGCTGAGTGTGAATCCTaGACCCGTCACCCCATCCCGGGTGCAGGTCTCGTCCTGGACGCA | + |
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Preference number: 5 (lower is better) Translates to: VTAGALTARAAECES*TRHPIPGAGLVLDA Trigger: TGCGTCCAGGACGAGACCTGCACCCGGGATGGGGTGACGGGTCCAGGATTCACACTCAGCGGCTCTTGCTGTCAGGGCCCCCGCTGTAAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS GCA 90 bp | GAAAGAAGGCCAGGAGCCCGTGAAGGTCCAGTCCGCGGTCGTTCTTaGCCGGGATTCCGGAACCGCAGCCCCGCACCGCCACAGAGAATT | + |
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Preference number: 5 (lower is better) Translates to: ERRPGAREGPVRGRS*PGFRNRSPAPPQRI Trigger: AATTCTCTGTGGCGGTGCGGGGCTGCGGTTCCGGAATCCCGGGCAAGAACGACCGCGGACTGGACCTTCACGGGCTCCTGGCCTTCTTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS CCA 90 bp | TGTAGACACGGCCACTGGCGTTGTAGCAGTTCACGACCGGCGGCATaGAGCCCTGGCACTTCTCGCGGCTCAGACCCACACAGCTGTAGC | + |
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Preference number: 5 (lower is better) Translates to: CRHGHWRCSSSRPAA*SPGTSRGSDPHSCS Trigger: GCTACAGCTGTGTGGGTCTGAGCCGCGAGAAGTGCCAGGGCTCCATGCCGCCGGTCGTGAACTGCTACAACGCCAGTGGCCGTGTCTACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS TCA 90 bp | CCGCTCCCACGGCCTCGGTACAGACGTCCACCCCGGGACCACATTTaGCTGTCTTCATCCTGTGCGGAGAGCATCCATCGTCCGCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: PLPRPRYRRPPRDHI*LSSSCAESIHRPPS Trigger: AGAAGGCGGACGATGGATGCTCTCCGCACAGGATGAAGACAGTCAAATGTGGTCCCGGGGTGGACGTCTGTACCGAGGCCGTGGGAGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS GCA 90 bp | CTGGGATCTGGGCCCCACCCTTTCCTGGATACTTCTCCATATTGCTaGGGTCTTGGTGGCCCGCAGCACCTCCATGGCCCGCAGTACCTC | + |
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Preference number: 5 (lower is better) Translates to: LGSGPHPFLDTSPYC*GLGGPQHLHGPQYL Trigger: GAGGTACTGCGGGCCATGGAGGTGCTGCGGGCCACCAAGACCGCAGCAATATGGAGAAGTATCCAGGAAAGGGTGGGGCCCAGATCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS TCA 90 bp | AGCCTCGGACAGGTAAGGACACGGTCACGTTGGCTGCCGTCAGGGTaGCGTTACCATCGAAGCAGCCCTTGTAGACACGGCCACTGGCGT | + |
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Preference number: 5 (lower is better) Translates to: SLGQVRTRSRWLPSG*RYHRSSPCRHGHWR Trigger: ACGCCAGTGGCCGTGTCTACAAGGGCTGCTTCGATGGTAACGTCACCCTGACGGCAGCCAACGTGACCGTGTCCTTACCTGTCCGAGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR CAA 90 bp | CCTGCCTGGTCATCTTCCAGCCTGGTCAGGAAAACGGGAAGAGGAGGCTTGCCGGTAGCACTCCAGGGCTaGCGCTCCTTCACACAGCAG | + |
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Preference number: 5 (lower is better) Translates to: PAWSSSSLVRKTGRGGLPVALQG*RSFTQQ Trigger: CTGCTGTGTGAAGGAGCGCAAGCCCTGGAGTGCTAC...CGGCAAGCCTCCTCTTCCCGTTTTCCTGACCAGGCTGGAAGATGACCAGGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR CAA 90 bp | GGGGCGGAGCCAGTCCAGTCAAGTGAGAAATGGAAAGAGTTGGTACCACGGGGCCATATTGCTGCGGTCTaGGTGGCCCGCAGCACCTCC | + |
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Preference number: 5 (lower is better) Translates to: GAEPVQSSEKWKELVPRGHIAAV*VARSTS Trigger: GGAGGTGCTGCGGGCCACCAAGACCGCAGCAATATG...GCCCCGTGGTACCAACTCTTTCCATTTCTCACTTGACTGGACTGGCTCCGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS GCA 90 bp | GCCCTGGCACTTCTCGCGGCTCAGACCCACACAGCTGTAGCACTCTaGACCGTTAGGCTCATATGCACTCTCATTGCCTGCAGGGTTGAG | + |
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Preference number: 5 (lower is better) Translates to: ALALLAAQTHTAVAL*TVRLICTLIACRVE Trigger: CTCAACCCTGCAGGCAATGAGAGTGCATATGAGCCTAACGGTGCAGAGTGCTACAGCTGTGTGGGTCTGAGCCGCGAGAAGTGCCAGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR CAA 90 bp | GGGGCGGAGCCAGTCCAGTCAAGTGAGAAATGGAAAGAGTTGGTACCACGGGGCGGATACTTCTCCATATaGCTGCGGTCTTGGTGGCCC | + |
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Preference number: 5 (lower is better) Translates to: GAEPVQSSEKWKELVPRGGYFSI*LRSWWP Trigger: GGGCCACCAAGACCGCAGCAATATGGAGAAGTATCC...GCCCCGTGGTACCAACTCTTTCCATTTCTCACTTGACTGGACTGGCTCCGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS CCA 90 bp | GACAACCAGGACCCTAGAGTGCCAGAGCCTCCTTTAGCTGGGATCTaGGCCCCACCCTTTCCTGGATACTTCTCCATATTGCTGCGGTCT | + |
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Preference number: 5 (lower is better) Translates to: DNQDPRVPEPPLAGI*APPFPGYFSILLRS Trigger: AGACCGCAGCAATATGGAGAAGTATCCAGGAAAGGGTGGGGCCCAGATCCCAGCTAAAGGAGGCTCTGGCACTCTAGGGTCCTGGTTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS GCA 90 bp | GCTCAGACCCACACAGCTGTAGCACTCTGCACCGTTAGGCTCATATaGACTCTCATTGCCTGCAGGGTTGAGGCCTCGCAAAGTGAGGTT | + |
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Preference number: 5 (lower is better) Translates to: AQTHTAVALCTVRLI*TLIACRVEASQSEV Trigger: AACCTCACTTTGCGAGGCCTCAACCCTGCAGGCAATGAGAGTGCATATGAGCCTAACGGTGCAGAGTGCTACAGCTGTGTGGGTCTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS CCA 90 bp | CTCAACGACGCCCCCTCTTCCTGTATGACTTCGAGATCCATTTCATaGGGAGAAGTGTGGCTGGCTTGGGCTGTGGTGGGCTTGATGATG | + |
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Preference number: 5 (lower is better) Translates to: LNDAPSSCMTSRSIS*GEVWLAWAVVGLMM Trigger: CATCATCAAGCCCACCACAGCCCAAGCCAGCCACACTTCTCCCCATGAAATGGATCTCGAAGTCATACAGGAAGAGGGGGCGTCGTTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR CAA 90 bp | CAAGCACAGTGCTCGGAGGATGGATCCATTGTCTACCTGCCTGGTCATCTTCCAACCCCGGGACCACATTaGACTGTCTTCATCCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: QAQCSEDGSIVYLPGHLPTPGPH*TVFILC Trigger: GCACAGGATGAAGACAGTCAAATGTGGTCCCGGGGT...TGGAAGATGACCAGGCAGGTAGACAATGGATCCATCCTCCGAGCACTGTGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR CAA 90 bp | CGGAGGATGGATCCATTGTCTACCTGCCTGGTCATCTTCCAGCCTGGTCAGGAAAAAGTGAGGTTGAGTTaGGCGTTGCATCGGTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: RRMDPLSTCLVIFQPGQEKVRLS*ALHRSS Trigger: CGAGGACCGATGCAACGCCAAACTCAACCTCACTTT...TTCCTGACCAGGCTGGAAGATGACCAGGCAGGTAGACAATGGATCCATCCTCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR CAA 90 bp | CCCGAGCGGAATATTTACAACAGAGGACTGTTTTCCGAAGCTGCAAACCAGTGCTCATTGCCTGCAGGGTaGAGGCCTCGCAAAGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: PERNIYNRGLFSEAANQCSLPAG*RPRKVR Trigger: CCTCACTTTGCGAGGCCTCAACCCTGCAGGCAATGA...GCACTGGTTTGCAGCTTCGGAAAACAGTCCTCTGTTGTAAATATTCCGCTCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR CAA 90 bp | CACATAGAGAGGCCAGAGACAAGACCCTGTTGTAGAGTTGTTCACAGTCTCCTACCTCGCAAAGTGAGGTaGAGTTTGGCGTTGCATCGG | + |
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Preference number: 5 (lower is better) Translates to: HIERPETRPCCRVVHSLLPRKVR*SLALHR Trigger: CCGATGCAACGCCAAACTCAACCTCACTTTGCGAGG...TAGGAGACTGTGAACAACTCTACAACAGGGTCTTGTCTCTGGCCTCTCTATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS-3UTR CAA 90 bp | ACAACAGAGGACTGTTTTCCGAAGCTGCAAACCAGTGCAGTCGGAACTGAGAATTCATATGCACTCTCATaGCCTGCAGGGTTGAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: TTEDCFPKLQTSAVGTENSYALS*PAGLRP Trigger: AGGCCTCAACCCTGCAGGCAATGAGAGTGCATATGA...ATTCTCAGTTCCGACTGCACTGGTTTGCAGCTTCGGAAAACAGTCCTCTGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS GCA 72 bp | CCAGGAGCCCGTGAAGGTCCAGTCCGCGGTCGTTCTTaGCCGGGATTCCGGAACCGCAGCCCCGCACCGCCA | + |
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Preference number: 6 (lower is better) Translates to: PGAREGPVRGRS*PGFRNRSPAPP Trigger: TGGCGGTGCGGGGCTGCGGTTCCGGAATCCCGGGCAAGAACGACCGCGGACTGGACCTTCACGGGCTCCTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS CAA 90 bp | CTTGCCCGGGATTCCGGAACCGCAGCCCCGCACCGCCACAGAGAATaGCCCGTGGATGGTCTCTACCGCTCCCACGGCCTCGGTACAGAC | + |
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Preference number: 6 (lower is better) Translates to: LARDSGTAAPHRHRE*PVDGLYRSHGLGTD Trigger: GTCTGTACCGAGGCCGTGGGAGCGGTAGAGACCATCCACGGGCAATTCTCTGTGGCGGTGCGGGGCTGCGGTTCCGGAATCCCGGGCAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS GCA 72 bp | ATTCCGGAACCGCAGCCCCGCACCGCCACAGAGAATTaGCCGTGGATGGTCTCTACCGCTCCCACGGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: IPEPQPRTATEN*PWMVSTAPTAS Trigger: CGAGGCCGTGGGAGCGGTAGAGACCATCCACGGGCAATTCTCTGTGGCGGTGCGGGGCTGCGGTTCCGGAAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS CCA 72 bp | CGCAGCCCCGCACCGCCACAGAGAATTGCCCGTGGATaGTCTCTACCGCTCCCACGGCCTCGGTACAGACGT | + |
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Preference number: 6 (lower is better) Translates to: RSPAPPQRIARG*SLPLPRPRYRR Trigger: ACGTCTGTACCGAGGCCGTGGGAGCGGTAGAGACCATCCACGGGCAATTCTCTGTGGCGGTGCGGGGCTGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS CCA 72 bp | GAACCGCAGCCCCGCACCGCCACAGAGAATTGCCCGTaGATGGTCTCTACCGCTCCCACGGCCTCGGTACAG | + |
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Preference number: 6 (lower is better) Translates to: EPQPRTATENCP*MVSTAPTASVQ Trigger: CTGTACCGAGGCCGTGGGAGCGGTAGAGACCATCCACGGGCAATTCTCTGTGGCGGTGCGGGGCTGCGGTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS CCA 72 bp | GGCCACTGGCGTTGTAGCAGTTCACGACCGGCGGCATaGAGCCCTGGCACTTCTCGCGGCTCAGACCCACAC | + |
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Preference number: 6 (lower is better) Translates to: GHWRCSSSRPAA*SPGTSRGSDPH Trigger: GTGTGGGTCTGAGCCGCGAGAAGTGCCAGGGCTCCATGCCGCCGGTCGTGAACTGCTACAACGCCAGTGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS CAA 72 bp | GATTCCGGAACCGCAGCCCCGCACCGCCACAGAGAATaGCCCGTGGATGGTCTCTACCGCTCCCACGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: DSGTAAPHRHRE*PVDGLYRSHGL Trigger: GAGGCCGTGGGAGCGGTAGAGACCATCCACGGGCAATTCTCTGTGGCGGTGCGGGGCTGCGGTTCCGGAATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS CAA 90 bp | CTGGGCCCCACCCTTTCCTGGATACTTCTCCATATTGCTGCGGTCTaGGTGGCCCGCAGCACCTCCATGGCCCGCAGTACCTCCATGGCC | + |
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Preference number: 6 (lower is better) Translates to: LGPTLSWILLHIAAV*VARSTSMARSTSMA Trigger: GGCCATGGAGGTACTGCGGGCCATGGAGGTGCTGCGGGCCACCAAGACCGCAGCAATATGGAGAAGTATCCAGGAAAGGGTGGGGCCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS CAA 90 bp | ACCGCTCCCACGGCCTCGGTACAGACGTCCACCCCGGGACCACATTaGACTGTCTTCATCCTGTGCGGAGAGCATCCATCGTCCGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: TAPTASVQTSTPGPH*TVFILCGEHPSSAF Trigger: GAAGGCGGACGATGGATGCTCTCCGCACAGGATGAAGACAGTCAAATGTGGTCCCGGGGTGGACGTCTGTACCGAGGCCGTGGGAGCGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS TCA 72 bp | GTCTTGTTGCGAAGGTCGGCGTTACAGCGGGGGCCCTaGCAGCAAGAGCCGCTGAGTGTGAATCCTGGACCC | + |
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Preference number: 6 (lower is better) Translates to: VLLRRSALQRGP*QQEPLSVNPGP Trigger: GGGTCCAGGATTCACACTCAGCGGCTCTTGCTGTCAGGGCCCCCGCTGTAACGCCGACCTTCGCAACAAGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS CCA 72 bp | CGTTACCATCGAAGCAGCCCTTGTAGACACGGCCACTaGCGTTGTAGCAGTTCACGACCGGCGGCATGGAGC | + |
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Preference number: 6 (lower is better) Translates to: RYHRSSPCRHGH*RCSSSRPAAWS Trigger: GCTCCATGCCGCCGGTCGTGAACTGCTACAACGCCAGTGGCCGTGTCTACAAGGGCTGCTTCGATGGTAACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS CAA 72 bp | TGGGGAGAAGTGTGGCTGGCTTGGGCTGTGGTGGGCTaGATGATGGAGGTGGTCGTGGTTGGGGCTGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: WGEVWLAWAVVG*MMEVVVVGAAV Trigger: TACAGCAGCCCCAACCACGACCACCTCCATCATCAAGCCCACCACAGCCCAAGCCAGCCACACTTCTCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS TCA 72 bp | CGGCCTCGGTACAGACGTCCACCCCGGGACCACATTTaGCTGTCTTCATCCTGTGCGGAGAGCATCCATCGT | + |
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Preference number: 6 (lower is better) Translates to: RPRYRRPPRDHI*LSSSCAESIHR Trigger: ACGATGGATGCTCTCCGCACAGGATGAAGACAGTCAAATGTGGTCCCGGGGTGGACGTCTGTACCGAGGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS TCA 72 bp | CAGGTAAGGACACGGTCACGTTGGCTGCCGTCAGGGTaGCGTTACCATCGAAGCAGCCCTTGTAGACACGGC | + |
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Preference number: 6 (lower is better) Translates to: QVRTRSRWLPSG*RYHRSSPCRHG Trigger: GCCGTGTCTACAAGGGCTGCTTCGATGGTAACGTCACCCTGACGGCAGCCAACGTGACCGTGTCCTTACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS GCA 72 bp | TCCACCCCGGGACCACATTTGACTGTCTTCATCCTGTaGGGAGAGCATCCATCGTCCGCCTTCTGCACGCAG | + |
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Preference number: 6 (lower is better) Translates to: STPGPHLTVFIL*GEHPSSAFCTQ Trigger: CTGCGTGCAGAAGGCGGACGATGGATGCTCTCCGCACAGGATGAAGACAGTCAAATGTGGTCCCGGGGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS CCA 72 bp | CCCTTTCCTGGATACTTCTCCATATTGCTGCGGTCTTaGTGGCCCGCAGCACCTCCATGGCCCGCAGTACCT | + |
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Preference number: 6 (lower is better) Translates to: PFPGYFSILLRS*WPAAPPWPAVP Trigger: AGGTACTGCGGGCCATGGAGGTGCTGCGGGCCACCAAGACCGCAGCAATATGGAGAAGTATCCAGGAAAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS CAA 72 bp | ACGGCCTCGGTACAGACGTCCACCCCGGGACCACATTaGACTGTCTTCATCCTGTGCGGAGAGCATCCATCG | + |
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Preference number: 6 (lower is better) Translates to: TASVQTSTPGPH*TVFILCGEHPS Trigger: CGATGGATGCTCTCCGCACAGGATGAAGACAGTCAAATGTGGTCCCGGGGTGGACGTCTGTACCGAGGCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS CAA 72 bp | CCTGCAGGGTTGAGGCCTCGCAAAGTGAGGTTGAGTTaGGCGTTGCATCGGTCCTCGGAGCACTGCTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: PAGLRPRKVRLS*ALHRSSEHCCS Trigger: GCTACAGCAGTGCTCCGAGGACCGATGCAACGCCAAACTCAACCTCACTTTGCGAGGCCTCAACCCTGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS CAA 72 bp | ACCCTTTCCTGGATACTTCTCCATATTGCTGCGGTCTaGGTGGCCCGCAGCACCTCCATGGCCCGCAGTACC | + |
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Preference number: 6 (lower is better) Translates to: TLSWILLHIAAV*VARSTSMARST Trigger: GGTACTGCGGGCCATGGAGGTGCTGCGGGCCACCAAGACCGCAGCAATATGGAGAAGTATCCAGGAAAGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS CAA 72 bp | ATCTGGGCCCCACCCTTTCCTGGATACTTCTCCATATaGCTGCGGTCTTGGTGGCCCGCAGCACCTCCATGG | + |
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Preference number: 6 (lower is better) Translates to: IWAPPFPGYFSI*LRSWWPAAPPW Trigger: CCATGGAGGTGCTGCGGGCCACCAAGACCGCAGCAATATGGAGAAGTATCCAGGAAAGGGTGGGGCCCAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS CCA 72 bp | GCCCCCTCTTCCTGTATGACTTCGAGATCCATTTCATaGGGAGAAGTGTGGCTGGCTTGGGCTGTGGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: APSSCMTSRSIS*GEVWLAWAVVG Trigger: GCCCACCACAGCCCAAGCCAGCCACACTTCTCCCCATGAAATGGATCTCGAAGTCATACAGGAAGAGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS CCA 72 bp | TTTCCTGGATACTTCTCCATATTGCTGCGGTCTTGGTaGCCCGCAGCACCTCCATGGCCCGCAGTACCTCCA | + |
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Preference number: 6 (lower is better) Translates to: FPGYFSILLRSW*PAAPPWPAVPP Trigger: TGGAGGTACTGCGGGCCATGGAGGTGCTGCGGGCCACCAAGACCGCAGCAATATGGAGAAGTATCCAGGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS CAA 72 bp | TCATTGCCTGCAGGGTTGAGGCCTCGCAAAGTGAGGTaGAGTTTGGCGTTGCATCGGTCCTCGGAGCACTGC | + |
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Preference number: 6 (lower is better) Translates to: SLPAGLRPRKVR*SLALHRSSEHC Trigger: GCAGTGCTCCGAGGACCGATGCAACGCCAAACTCAACCTCACTTTGCGAGGCCTCAACCCTGCAGGCAATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS GCA 72 bp | CTTCTCGCGGCTCAGACCCACACAGCTGTAGCACTCTaGACCGTTAGGCTCATATGCACTCTCATTGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: LLAAQTHTAVAL*TVRLICTLIAC Trigger: GCAGGCAATGAGAGTGCATATGAGCCTAACGGTGCAGAGTGCTACAGCTGTGTGGGTCTGAGCCGCGAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS CCA 72 bp | TCGAGATCCATTTCATGGGGAGAAGTGTGGCTGGCTTaGGCTGTGGTGGGCTTGATGATGGAGGTGGTCGTG | + |
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Preference number: 6 (lower is better) Translates to: SRSISWGEVWLA*AVVGLMMEVVV Trigger: CACGACCACCTCCATCATCAAGCCCACCACAGCCCAAGCCAGCCACACTTCTCCCCATGAAATGGATCTCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS GCA 72 bp | CACACAGCTGTAGCACTCTGCACCGTTAGGCTCATATaGACTCTCATTGCCTGCAGGGTTGAGGCCTCGCAA | + |
|
Preference number: 6 (lower is better) Translates to: HTAVALCTVRLI*TLIACRVEASQ Trigger: TTGCGAGGCCTCAACCCTGCAGGCAATGAGAGTGCATATGAGCCTAACGGTGCAGAGTGCTACAGCTGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS CAA 72 bp | TTCGAGATCCATTTCATGGGGAGAAGTGTGGCTGGCTaGGGCTGTGGTGGGCTTGATGATGGAGGTGGTCGT | + |
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Preference number: 6 (lower is better) Translates to: FEIHFMGRSVAG*GCGGLDDGGGR Trigger: ACGACCACCTCCATCATCAAGCCCACCACAGCCCAAGCCAGCCACACTTCTCCCCATGAAATGGATCTCGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS GCA 72 bp | CTCTGCACCGTTAGGCTCATATGCACTCTCATTGCCTaGAGGGTTGAGGCCTCGCAAAGTGAGGTTGAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LCTVRLICTLIA*RVEASQSEVEF Trigger: AAACTCAACCTCACTTTGCGAGGCCTCAACCCTGCAGGCAATGAGAGTGCATATGAGCCTAACGGTGCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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| CDS CCA 72 bp | TGTATGACTTCGAGATCCATTTCATGGGGAGAAGTGTaGCTGGCTTGGGCTGTGGTGGGCTTGATGATGGAG | + |
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Preference number: 6 (lower is better) Translates to: CMTSRSISWGEV*LAWAVVGLMME Trigger: CTCCATCATCAAGCCCACCACAGCCCAAGCCAGCCACACTTCTCCCCATGAAATGGATCTCGAAGTCATACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080718.6 |
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