Pregenerated sensors for LYPD11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058717Ensembl transcript IDs: ENSMUST00000081657.6, ENSMUST00000205376.2
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGCTCAGTGGCTCCCAAGTCTAAGCATGAGGGGCAGAGGTGTGTaGGTGAGGGATGAGGGCGCCCAGGAGAAGCACAGGCCAACAGAG | + |
|
Preference number: 1 (lower is better) Translates to: WAQWLPSLSMRGRGV*VRDEGAQEKHRPTE Trigger: CTCTGTTGGCCTGTGCTTCTCCTGGGCGCCCTCATCCCTCACCCACACACCTCTGCCCCTCATGCTTAGACTTGGGAGCCACTGAGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| 3UTR CCA 90 bp | CGTGGTCAACGTGTGCTTGTCTGCTCTGGAGCCGGCTGGGCTCAGTaGCTCCCAAGTCTAAGCATGAGGGGCAGAGGTGTGTGGGTGAGG | + |
|
Preference number: 1 (lower is better) Translates to: RGQRVLVCSGAGWAQ*LPSLSMRGRGVWVR Trigger: CCTCACCCACACACCTCTGCCCCTCATGCTTAGACTTGGGAGCCACTGAGCCCAGCCGGCTCCAGAGCAGACAAGCACACGTTGACCACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| 3UTR GCA 90 bp | CAACAGCAACTTTATTTTTCCACACGTGGTCAACGTGTGCTTGTCTaGTCTGGAGCCGGCTGGGCTCAGTGGCTCCCAAGTCTAAGCATG | + |
|
Preference number: 1 (lower is better) Translates to: QQQLYFSTRGQRVLV*SGAGWAQWLPSLSM Trigger: CATGCTTAGACTTGGGAGCCACTGAGCCCAGCCGGCTCCAGAGCAGACAAGCACACGTTGACCACGTGTGGAAAAATAAAGTTGCTGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| 3UTR GCA 90 bp | TGGACAAACAACAGCAACTTTATTTTTCCACACGTGGTCAACGTGTaGTTGTCTGCTCTGGAGCCGGCTGGGCTCAGTGGCTCCCAAGTC | + |
|
Preference number: 1 (lower is better) Translates to: WTNNSNFIFPHVVNV*LSALEPAGLSGSQV Trigger: GACTTGGGAGCCACTGAGCCCAGCCGGCTCCAGAGCAGACAAGCACACGTTGACCACGTGTGGAAAAATAAAGTTGCTGTTGTTTGTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| 3UTR-3UTR TCA 90 bp | CAACGTGTGCTTGTCTGCTCTGGAGCCGGCTGGGCTCAGTGGCTCCCAAGTCTATGTGTGGGTGAGGGATaGGGGCGCCCAGGAGAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: QRVLVCSGAGWAQWLPSLCVGEG*GRPGEA Trigger: TGCTTCTCCTGGGCGCCCTCATCCCTCACCCACACA...TAGACTTGGGAGCCACTGAGCCCAGCCGGCTCCAGAGCAGACAAGCACACGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| 3UTR CCA 72 bp | TGGCTCCCAAGTCTAAGCATGAGGGGCAGAGGTGTGTaGGTGAGGGATGAGGGCGCCCAGGAGAAGCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: WLPSLSMRGRGV*VRDEGAQEKHR Trigger: CCTGTGCTTCTCCTGGGCGCCCTCATCCCTCACCCACACACCTCTGCCCCTCATGCTTAGACTTGGGAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| 3UTR CCA 72 bp | CGTGTGCTTGTCTGCTCTGGAGCCGGCTGGGCTCAGTaGCTCCCAAGTCTAAGCATGAGGGGCAGAGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: RVLVCSGAGWAQ*LPSLSMRGRGV Trigger: CACACCTCTGCCCCTCATGCTTAGACTTGGGAGCCACTGAGCCCAGCCGGCTCCAGAGCAGACAAGCACACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| 3UTR CCA 72 bp | TTTTTCCACACGTGGTCAACGTGTGCTTGTCTGCTCTaGAGCCGGCTGGGCTCAGTGGCTCCCAAGTCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: FFHTWSTCACLL*SRLGSVAPKSK Trigger: CTTAGACTTGGGAGCCACTGAGCCCAGCCGGCTCCAGAGCAGACAAGCACACGTTGACCACGTGTGGAAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| 3UTR GCA 72 bp | CTTTATTTTTCCACACGTGGTCAACGTGTGCTTGTCTaGTCTGGAGCCGGCTGGGCTCAGTGGCTCCCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LYFSTRGQRVLV*SGAGWAQWLPS Trigger: ACTTGGGAGCCACTGAGCCCAGCCGGCTCCAGAGCAGACAAGCACACGTTGACCACGTGTGGAAAAATAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| 3UTR GCA 72 bp | AACAGCAACTTTATTTTTCCACACGTGGTCAACGTGTaGTTGTCTGCTCTGGAGCCGGCTGGGCTCAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: NSNFIFPHVVNV*LSALEPAGLSG Trigger: GCCACTGAGCCCAGCCGGCTCCAGAGCAGACAAGCACACGTTGACCACGTGTGGAAAAATAAAGTTGCTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| CDS-3UTR TCA 90 bp | GGGATGAGGGCGCCCAGGAGAAGCACAGGCCAACAGAGCCCAGCCTCGGGTCTTAAACAGACAGGACATTaGATGGATCCCTGTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GMRAPRRSTGQQSPASGLKQTGH*MDPCPE Trigger: CTCTGGACAGGGATCCATTCAATGTCCTGTCTGTTT...AAGACCCGAGGCTGGGCTCTGTTGGCCTGTGCTTCTCCTGGGCGCCCTCATCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| CDS-3UTR CCA 90 bp | GGGATGAGGGCGCCCAGGAGAAGCACAGGCCAACAGAGCCCAGCCTCGGGTCTTACAAATTTGGTATGCTaGGAGCAGGAACCCCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GMRAPRRSTGQQSPASGLTNLVC*EQEPRK Trigger: CTTTCGGGGTTCCTGCTCCCAGCATACCAAATTTGT...AAGACCCGAGGCTGGGCTCTGTTGGCCTGTGCTTCTCCTGGGCGCCCTCATCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| CDS-3UTR CCA 90 bp | TGGTCAACGTGTGCTTGTCTGCTCTGGAGCCGGCTGGGCTCAGTGGCTCCCAAGGGCAGAGGACAAATTTaGTATGCTGGGAGCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: WSTCACLLWSRLGSVAPKGRGQI*YAGSRN Trigger: GTTCCTGCTCCCAGCATACCAAATTTGTCCTCTGCC...CTTGGGAGCCACTGAGCCCAGCCGGCTCCAGAGCAGACAAGCACACGTTGACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| CDS-3UTR TCA 90 bp | TGGTCAACGTGTGCTTGTCTGCTCTGGAGCCGGCTGGGCTCAGTGGCTCCCAAGACACCTGGACATCATTaGCACTTTTACTCTCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WSTCACLLWSRLGSVAPKTPGHH*HFYSPP Trigger: AGGCGGAGAGTAAAAGTGTCAATGATGTCCAGGTGT...CTTGGGAGCCACTGAGCCCAGCCGGCTCCAGAGCAGACAAGCACACGTTGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| CDS-3UTR GCA 90 bp | CAACGTGTGCTTGTCTGCTCTGGAGCCGGCTGGGCTCAGTGGCTCCCAAGTCTAAGGACAAATTTGGTATaGTGGGAGCAGGAACCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: QRVLVCSGAGWAQWLPSLRTNLV*WEQEPR Trigger: TCGGGGTTCCTGCTCCCAGCATACCAAATTTGTCCT...TAGACTTGGGAGCCACTGAGCCCAGCCGGCTCCAGAGCAGACAAGCACACGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| CDS-3UTR GCA 90 bp | GGGATGAGGGCGCCCAGGAGAAGCACAGGCCAACAGAGCCCAGCCTCGGGTCTTGCTGCTGCCTTTACTTaGCAATATGAGAGATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GMRAPRRSTGQQSPASGLAAAFT*QYERFF Trigger: GAAAAATCTCTCATATTGGCAAGTAAAGGCAGCAGC...AAGACCCGAGGCTGGGCTCTGTTGGCCTGTGCTTCTCCTGGGCGCCCTCATCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| 3UTR CAA 72 bp | AGCAACTTTATTTTTCCACACGTGGTCAACGTGTGCTaGTCTGCTCTGGAGCCGGCTGGGCTCAGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SNFIFPHVVNVC*SALEPAGLSGS Trigger: GGAGCCACTGAGCCCAGCCGGCTCCAGAGCAGACAAGCACACGTTGACCACGTGTGGAAAAATAAAGTTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| CDS-3UTR TCA 90 bp | CTGCTCTGGAGCCGGCTGGGCTCAGTGGCTCCCAAGTCTAAGCATGAGGGGCAGCTTTACTTGCCAATATaGGAGATTTTTCACTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LLWSRLGSVAPKSKHEGQLYLPI*EIFHST Trigger: TGTGGAGTGAAAAATCTCTCATATTGGCAAGTAAAG...CTGCCCCTCATGCTTAGACTTGGGAGCCACTGAGCCCAGCCGGCTCCAGAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| CDS-3UTR CAA 90 bp | TGCTCTGGAGCCGGCTGGGCTCAGTGGCTCCCAAGTCTAAGCATGAGGGGCAGAAGGTTTTTGGCTGAGTaGGCCAGGCACCCATCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: CSGAGWAQWLPSLSMRGRRFLAE*ARHPSR Trigger: CCTTGATGGGTGCCTGGCCAACTCAGCCAAAAACCT...TCTGCCCCTCATGCTTAGACTTGGGAGCCACTGAGCCCAGCCGGCTCCAGAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| CDS-3UTR CAA 90 bp | TCCACACGTGGTCAACGTGTGCTTGTCTGCTCTGGAGCCGGCTGGGCTCAGTGGTTGGTACAGATGAAGTaGACTGTCTCCACCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: STRGQRVLVCSGAGWAQWLVQMK*TVSTHS Trigger: GCTGTGGGTGGAGACAGTCAACTTCATCTGTACCAA...CCACTGAGCCCAGCCGGCTCCAGAGCAGACAAGCACACGTTGACCACGTGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| CDS-3UTR CAA 90 bp | CAACGTGTGCTTGTCTGCTCTGGAGCCGGCTGGGCTCAGTGGCTCCCAAGTCTAGGGCAGAGGACAAATTaGGTATGCTGGGAGCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QRVLVCSGAGWAQWLPSLGQRTN*VCWEQE Trigger: TTCCTGCTCCCAGCATACCAAATTTGTCCTCTGCCC...TAGACTTGGGAGCCACTGAGCCCAGCCGGCTCCAGAGCAGACAAGCACACGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| CDS-3UTR CAA 90 bp | GTCTGCTCTGGAGCCGGCTGGGCTCAGTGGCTCCCAAGTCTAAGCATGAGGGGCAGGCTAAAGAAGTTCTaGAGCCCACCTCCTTCTACA | + |
|
Preference number: 5 (lower is better) Translates to: VCSGAGWAQWLPSLSMRGRLKKF*SPPPST Trigger: TGTAGAAGGAGGTGGGCTCAAGAACTTCTTTAGCCT...GCCCCTCATGCTTAGACTTGGGAGCCACTGAGCCCAGCCGGCTCCAGAGCAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| CDS-3UTR CAA 90 bp | TGGTCAACGTGTGCTTGTCTGCTCTGGAGCCGGCTGGGCTCAGTGGCTCCCAAGGTGCTGTTAGCACTGTaGCACAGTTCAGTGTTACAG | + |
|
Preference number: 5 (lower is better) Translates to: WSTCACLLWSRLGSVAPKVLLAL*HSSVLQ Trigger: CTGTAACACTGAACTGTGCAACAGTGCTAACAGCAC...CTTGGGAGCCACTGAGCCCAGCCGGCTCCAGAGCAGACAAGCACACGTTGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| CDS-3UTR CAA 90 bp | TCCACACGTGGTCAACGTGTGCTTGTCTGCTCTGGAGCCGGCTGGGCTCAGTGGCTTTTCAATAGGTTTTaGGCTGAGTTGGCCAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: STRGQRVLVCSGAGWAQWLFNRF*AELARH Trigger: GTGCCTGGCCAACTCAGCCAAAAACCTATTGAAAAG...CCACTGAGCCCAGCCGGCTCCAGAGCAGACAAGCACACGTTGACCACGTGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| CDS-3UTR CAA 90 bp | TTTTCCACACGTGGTCAACGTGTGCTTGTCTGCTCTGGAGCCGGCTGGGCTCAGAACACCTGGACATCATaGACACTTTTACTCTCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: FSTRGQRVLVCSGAGWAQNTWTS*TLLLSA Trigger: GGCGGAGAGTAAAAGTGTCAATGATGTCCAGGTGTT...CTGAGCCCAGCCGGCTCCAGAGCAGACAAGCACACGTTGACCACGTGTGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| CDS-3UTR CAA 90 bp | TGTCTGCTCTGGAGCCGGCTGGGCTCAGTGGCTCCCAAGTCTAAGCATGAGGGGTTTTCACTCCACATGTaGGTACAGATGAAGTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: CLLWSRLGSVAPKSKHEGFSLHM*VQMKLT Trigger: AGTCAACTTCATCTGTACCAACATGTGGAGTGAAAA...CCCCTCATGCTTAGACTTGGGAGCCACTGAGCCCAGCCGGCTCCAGAGCAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| CDS-3UTR CAA 90 bp | CTGGGCTCAGTGGCTCCCAAGTCTAAGCATGAGGGGCAGAGGTGTGTGGGTGAGCAGAGAAGATTCCGATaGAAGTTTGGCTTTTCAATA | + |
|
Preference number: 5 (lower is better) Translates to: LGSVAPKSKHEGQRCVGEQRRFR*KFGFSI Trigger: TATTGAAAAGCCAAACTTCAATCGGAATCTTCTCTG...CTCACCCACACACCTCTGCCCCTCATGCTTAGACTTGGGAGCCACTGAGCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| CDS TCA 90 bp | GACGAAATCCCTGGAGTTCATGAGGGAAGGTCAGCCTTCTCTCCCTaGAGAAGGATCTCTGCATCTCACAACTTGGTCCTGAAAGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: DEIPGVHEGRSAFSP*RRISASHNLVLKVS Trigger: TGAAACTTTCAGGACCAAGTTGTGAGATGCAGAGATCCTTCTTCAGGGAGAGAAGGCTGACCTTCCCTCATGAACTCCAGGGATTTCGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205376.2 |
||
| CDS TCA 90 bp | GTATGCTGGGAGCAGGAACCCCGAAAGTGCAAACAGACAGGACATTaGATGGATCCCTGTCCAGAGGACTCTGAAAGTTTCACGTTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: VCWEQEPRKCKQTGH*MDPCPEDSESFTFL Trigger: TAAAAACGTGAAACTTTCAGAGTCCTCTGGACAGGGATCCATTCAATGTCCTGTCTGTTTGCACTTTCGGGGTTCCTGCTCCCAGCATAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| CDS TCA 90 bp | TCTGACTTAGTGAAGCCACTACCTAATTTCACCATAATTCCCTTCTaGCACTTCAGAGTATCTGAGCAGGGGCAGAAGCCCAGCAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SDLVKPLPNFTIIPF*HFRVSEQGQKPSRE Trigger: CTCTCTGCTGGGCTTCTGCCCCTGCTCAGATACTCTGAAGTGTCAGAAGGGAATTATGGTGAAATTAGGTAGTGGCTTCACTAAGTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205376.2 |
||
| CDS GCA 90 bp | GACATCATTGACACTTTTACTCTCCGCCTTGCTGCTGCCTTTACTTaGCAATATGAGAGATTTTTCACCTACATCTATGAGCAGCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: DIIDTFTLRLAAAFT*QYERFFTYIYEQQC Trigger: ACACTGCTGCTCATAGATGTAGGTGAAAAATCTCTCATATTGGCAAGTAAAGGCAGCAGCAAGGCGGAGAGTAAAAGTGTCAATGATGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205376.2 |
||
| CDS TCA 72 bp | AGAAGTTCTGCAAGCGCTGTTGCTGGAGGAAGGAGCTaGAGCAAGACACCGTCAGCTGACGAAATCCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RSSASAVAGGRS*SKTPSADEIPG Trigger: TCCAGGGATTTCGTCAGCTGACGGTGTCTTGCTTCAGCTCCTTCCTCCAGCAACAGCGCTTGCAGAACTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205376.2 |
||
| CDS TCA 72 bp | CCTGGAGTTCATGAGGGAAGGTCAGCCTTCTCTCCCTaGAGAAGGATCTCTGCATCTCACAACTTGGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PGVHEGRSAFSP*RRISASHNLVL Trigger: CAGGACCAAGTTGTGAGATGCAGAGATCCTTCTTCAGGGAGAGAAGGCTGACCTTCCCTCATGAACTCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205376.2 |
||
| CDS GCA 72 bp | GTAATGGGGCAGGCAGAGGAAGGAACAAGCTTTGTTTaGAGAAGTTCTGCAAGCGCTGTTGCTGGAGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: VMGQAEEGTSFV*RSSASAVAGGR Trigger: CCTTCCTCCAGCAACAGCGCTTGCAGAACTTCTGCAAACAAAGCTTGTTCCTTCCTCTGCCTGCCCCATTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205376.2 |
||
| CDS CCA 72 bp | CGAGTGTCCTTAGGGCAGAGGACAAATTTGGTATGCTaGGAGCAGGAACCCCGAAAGTGCAAACAGACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RVSLGQRTNLVC*EQEPRKCKQTG Trigger: TCCTGTCTGTTTGCACTTTCGGGGTTCCTGCTCCCAGCATACCAAATTTGTCCTCTGCCCTAAGGACACTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| CDS GCA 72 bp | CAACGAGTGTCCTTAGGGCAGAGGACAAATTTGGTATaGTGGGAGCAGGAACCCCGAAAGTGCAAACAGACA | + |
|
Preference number: 6 (lower is better) Translates to: QRVSLGQRTNLV*WEQEPRKCKQT Trigger: TGTCTGTTTGCACTTTCGGGGTTCCTGCTCCCAGCATACCAAATTTGTCCTCTGCCCTAAGGACACTCGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| CDS GCA 72 bp | GGCAGAGGAAGGAACAAGCTTTGTTTGCAGAAGTTCTaGAAGCGCTGTTGCTGGAGGAAGGAGCTGAAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: GRGRNKLCLQKF*KRCCWRKELKQ Trigger: TTGCTTCAGCTCCTTCCTCCAGCAACAGCGCTTGCAGAACTTCTGCAAACAAAGCTTGTTCCTTCCTCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205376.2 |
||
| CDS CAA 72 bp | AGTAATGGGGCAGGCAGAGGAAGGAACAAGCTTTGTTaGCAGAAGTTCTGCAAGCGCTGTTGCTGGAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SNGAGRGRNKLC*QKFCKRCCWRK Trigger: CTTCCTCCAGCAACAGCGCTTGCAGAACTTCTGCAAACAAAGCTTGTTCCTTCCTCTGCCTGCCCCATTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205376.2 |
||
| CDS CAA 90 bp | GAGGCAGTCACTATTCCAGGTCCTCCGGAAAACACCTGGACATCATaGACACTTTTACTCTCCGCCTTGCTGCTGCCTTTACTTGCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: EAVTIPGPPENTWTS*TLLLSALLLPLLAN Trigger: ATTGGCAAGTAAAGGCAGCAGCAAGGCGGAGAGTAAAAGTGTCAATGATGTCCAGGTGTTTTCCGGAGGACCTGGAATAGTGACTGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081657.6 ENSMUST00000205376.2 |
||
| CDS CAA 90 bp | TGGATCTTAAGTAATGGGGCAGGCAGAGGAAGGAACAAGCTTTGTTaGCAGAAGTTCTGCAAGCGCTGTTGCTGGAGGAAGGAGCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: WILSNGAGRGRNKLC*QKFCKRCCWRKELK Trigger: CTTCAGCTCCTTCCTCCAGCAACAGCGCTTGCAGAACTTCTGCAAACAAAGCTTGTTCCTTCCTCTGCCTGCCCCATTACTTAAGATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205376.2 |
||
| CDS CAA 72 bp | GAGTTGGCCAGGCACCCATCAAGGCTAAAGAAGTTCTaGAGCCCACCTCCTTCTACAGTCATGTCACTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: ELARHPSRLKKF*SPPPSTVMSLK Trigger: TTTCAGTGACATGACTGTAGAAGGAGGTGGGCTCAAGAACTTCTTTAGCCTTGATGGGTGCCTGGCCAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| CDS TCA 72 bp | GTGAAGCCACTACCTAATTTCACCATAATTCCCTTCTaGCACTTCAGAGTATCTGAGCAGGGGCAGAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: VKPLPNFTIIPF*HFRVSEQGQKP Trigger: GGGCTTCTGCCCCTGCTCAGATACTCTGAAGTGTCAGAAGGGAATTATGGTGAAATTAGGTAGTGGCTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205376.2 |
||
| CDS GCA 72 bp | GGGAAGGTCAGCCTTCTCTCCCTGAAGAAGGATCTCTaGATCTCACAACTTGGTCCTGAAAGTTTCACGTTT | + |
|
Preference number: 6 (lower is better) Translates to: GKVSLLSLKKDL*ISQLGPESFTF Trigger: AAACGTGAAACTTTCAGGACCAAGTTGTGAGATGCAGAGATCCTTCTTCAGGGAGAGAAGGCTGACCTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205376.2 |
||
| CDS CCA 72 bp | AGGAACCCCGAAAGTGCAAACAGACAGGACATTGAATaGATCCCTGTCCAGAGGACTCTGAAAGTTTCACGT | + |
|
Preference number: 6 (lower is better) Translates to: RNPESANRQDIE*IPVQRTLKVSR Trigger: ACGTGAAACTTTCAGAGTCCTCTGGACAGGGATCCATTCAATGTCCTGTCTGTTTGCACTTTCGGGGTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| CDS CAA 72 bp | ACTATTCCAGGTCCTCCGGAAAACACCTGGACATCATaGACACTTTTACTCTCCGCCTTGCTGCTGCCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: TIPGPPENTWTS*TLLLSALLLPL Trigger: TAAAGGCAGCAGCAAGGCGGAGAGTAAAAGTGTCAATGATGTCCAGGTGTTTTCCGGAGGACCTGGAATAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081657.6 ENSMUST00000205376.2 |
||
| CDS CAA 90 bp | AAGATTCCGATTGAAGTTTGGCTTTTCAATAGGTTTTTGGCTGAGTaGGCCAGGCACCCATCAAGGCTAAAGAAGTTCTTGAGCCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: KIPIEVWLFNRFLAE*ARHPSRLKKFLSPP Trigger: AGGTGGGCTCAAGAACTTCTTTAGCCTTGATGGGTGCCTGGCCAACTCAGCCAAAAACCTATTGAAAAGCCAAACTTCAATCGGAATCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| CDS TCA 72 bp | CCTGAAGAAGGATCTCTGCATCTCACAACTTGGTCCTaGAAGTTTCACGTTTTTAATGAGGACACTGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PEEGSLHLTTWS*KFHVFNEDTGA Trigger: AGCACCAGTGTCCTCATTAAAAACGTGAAACTTTCAGGACCAAGTTGTGAGATGCAGAGATCCTTCTTCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205376.2 |
||
| CDS GCA 72 bp | GACACTTTTACTCTCCGCCTTGCTGCTGCCTTTACTTaGCAATATGAGAGATTTTTCACTCCACATGTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: DTFTLRLAAAFT*QYERFFTPHVG Trigger: ACCAACATGTGGAGTGAAAAATCTCTCATATTGGCAAGTAAAGGCAGCAGCAAGGCGGAGAGTAAAAGTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| CDS CAA 72 bp | AAGATTCCGATTGAAGTTTGGCTTTTCAATAGGTTTTaGGCTGAGTTGGCCAGGCACCCATCAAGGCTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: KIPIEVWLFNRF*AELARHPSRLK Trigger: CTTTAGCCTTGATGGGTGCCTGGCCAACTCAGCCAAAAACCTATTGAAAAGCCAAACTTCAATCGGAATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| CDS CAA 90 bp | ACTACAGAGAAGATTCCGATTGAAGTTTGGCTTTTCAATAGGTTTTaGGCTGAGTTGGCCAGGCACCCATCAAGGCTAAAGAAGTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TTEKIPIEVWLFNRF*AELARHPSRLKKFL Trigger: CAAGAACTTCTTTAGCCTTGATGGGTGCCTGGCCAACTCAGCCAAAAACCTATTGAAAAGCCAAACTTCAATCGGAATCTTCTCTGTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| CDS GCA 72 bp | GACACTTTTACTCTCCGCCTTGCTGCTGCCTTTACTTaGCAATATGAGAGATTTTTCACCTACATCTATGAG | + |
|
Preference number: 6 (lower is better) Translates to: DTFTLRLAAAFT*QYERFFTYIYE Trigger: CTCATAGATGTAGGTGAAAAATCTCTCATATTGGCAAGTAAAGGCAGCAGCAAGGCGGAGAGTAAAAGTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205376.2 |
||
| CDS CCA 72 bp | GAAACTTCCACTACAGAGAAGATTCCGATTGAAGTTTaGCTTTTCAATAGGTTTTTGGCTGAGTTGGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ETSTTEKIPIEV*LFNRFLAELAR Trigger: CCTGGCCAACTCAGCCAAAAACCTATTGAAAAGCCAAACTTCAATCGGAATCTTCTCTGTAGTGGAAGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| CDS CAA 72 bp | TTACTTGCCAATATGAGAGATTTTTCACTCCACATGTaGGTACAGATGAAGTTGACTGTCTCCACCCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: LLANMRDFSLHM*VQMKLTVSTHS Trigger: GCTGTGGGTGGAGACAGTCAACTTCATCTGTACCAACATGTGGAGTGAAAAATCTCTCATATTGGCAAGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||
| CDS CAA 72 bp | ATTGAAGTTTGGCTTTTCAATAGGTTTTTGGCTGAGTaGGCCAGGCACCCATCAAGGCTAAAGAAGTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: IEVWLFNRFLAE*ARHPSRLKKFL Trigger: CAAGAACTTCTTTAGCCTTGATGGGTGCCTGGCCAACTCAGCCAAAAACCTATTGAAAAGCCAAACTTCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081657.6 |
||