Pregenerated sensors for LYPD10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045587Ensembl transcript IDs: ENSMUST00000051714.9, ENSMUST00000206826.2
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGTGGTCAACGTGTGCTTGTCTGCTCTGGAGCCGGCTGGGTTCAGTaGCTCCCAAGTCTAAGCATGAGGGGCAGAGGTGTGTGGGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: RGQRVLVCSGAGWVQ*LPSLSMRGRGVWVR Trigger: CCTCACCCACACACCTCTGCCCCTCATGCTTAGACTTGGGAGCCACTGAACCCAGCCGGCTCCAGAGCAGACAAGCACACGTTGACCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051714.9 |
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| 3UTR GCA 90 bp | CAACAGCAACTTTATTTTTCCACACGTGGTCAACGTGTGCTTGTCTaGTCTGGAGCCGGCTGGGTTCAGTGGCTCCCAAGTCTAAGCATG | + |
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Preference number: 1 (lower is better) Translates to: QQQLYFSTRGQRVLV*SGAGWVQWLPSLSM Trigger: CATGCTTAGACTTGGGAGCCACTGAACCCAGCCGGCTCCAGAGCAGACAAGCACACGTTGACCACGTGTGGAAAAATAAAGTTGCTGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051714.9 |
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| 3UTR GCA 90 bp | TGGACAAACAACAGCAACTTTATTTTTCCACACGTGGTCAACGTGTaGTTGTCTGCTCTGGAGCCGGCTGGGTTCAGTGGCTCCCAAGTC | + |
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Preference number: 1 (lower is better) Translates to: WTNNSNFIFPHVVNV*LSALEPAGFSGSQV Trigger: GACTTGGGAGCCACTGAACCCAGCCGGCTCCAGAGCAGACAAGCACACGTTGACCACGTGTGGAAAAATAAAGTTGCTGTTGTTTGTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051714.9 |
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| 3UTR-3UTR TCA 90 bp | TGGACAAACAACAGCAACTTTATTTTTCCACACGTGGTCAACGTGTGCTTGTCTGCAGAGGTGTGTGGGTaGGGGATGAGGGCCCCGACA | + |
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Preference number: 2 (lower is better) Translates to: WTNNSNFIFPHVVNVCLSAEVCG*GMRAPT Trigger: TGTCGGGGCCCTCATCCCTCACCCACACACCTCTGC...AGACAAGCACACGTTGACCACGTGTGGAAAAATAAAGTTGCTGTTGTTTGTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051714.9 |
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| 3UTR-3UTR CAA 90 bp | CAACAGCAACTTTATTTTTCCACACGTGGTCAACGTGTGCTTGTCTGCTCTGGACCCAGCCTCGGGTCTTaGAAGTCAGAGGAGGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: QQQLYFSTRGQRVLVCSGPSLGS*KSEEGW Trigger: CCAGCCCTCCTCTGACTTCAAAGACCCGAGGCTGGG...TCCAGAGCAGACAAGCACACGTTGACCACGTGTGGAAAAATAAAGTTGCTGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051714.9 |
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| CDS-3UTR GCA 90 bp | CCGACAGCGCAGGCCAACAGCGCCCAGCCTCGGGTCTTTGAAGTCAGAGGAGGGCTGAGGTCACCTCCATaGACTCCCAAGGAAGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: PTAQANSAQPRVFEVRGGLRSPP*TPKEAA Trigger: TGCAGCTTCCTTGGGAGTGCATGGAGGTGACCTCAG...CCCTCCTCTGACTTCAAAGACCCGAGGCTGGGCGCTGTTGGCCTGCGCTGTCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051714.9 |
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| CDS-3UTR TCA 90 bp | GGTGTGTGGGTGAGGGATGAGGGCCCCGACAGCGCAGGCCAACAGCGCCCAGCCCTTTGGTCCCCAATATaGGAGATTTTTCACCTACAT | + |
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Preference number: 4 (lower is better) Translates to: GVWVRDEGPDSAGQQRPALWSPI*EIFHLH Trigger: ATGTAGGTGAAAAATCTCTCATATTGGGGACCAAAG...GGCTGGGCGCTGTTGGCCTGCGCTGTCGGGGCCCTCATCCCTCACCCACACACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051714.9 |
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| CDS-3UTR TCA 90 bp | GGTGTGTGGGTGAGGGATGAGGGCCCCGACAGCGCAGGCCAACAGCGCCCAGCCTACGATCCATTCAATTaGTGTCCTACTGAAGTTTTG | + |
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Preference number: 4 (lower is better) Translates to: GVWVRDEGPDSAGQQRPAYDPFN*CPTEVL Trigger: CAAAACTTCAGTAGGACATCAATTGAATGGATCGTA...GGCTGGGCGCTGTTGGCCTGCGCTGTCGGGGCCCTCATCCCTCACCCACACACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051714.9 |
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| CDS-3UTR GCA 90 bp | CAGCGCAGGCCAACAGCGCCCAGCCTCGGGTCTTTGAAGTCAGAGGAGGGCTGGGAAGTGGACATAAGATaGACTCACTATTCCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: QRRPTAPSLGSLKSEEGWEVDIR*THYSRS Trigger: GGACCTGGAATAGTGAGTGCATCTTATGTCCACTTC...CCAGCCCTCCTCTGACTTCAAAGACCCGAGGCTGGGCGCTGTTGGCCTGCGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051714.9 |
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| CDS-3UTR CCA 90 bp | CCGACAGCGCAGGCCAACAGCGCCCAGCCTCGGGTCTTTGAAGTCAGAGGAGGGGGCACAAGGTATGGTTaGACTCTGTATTGCAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: PTAQANSAQPRVFEVRGGGTRYG*TLYCKN Trigger: GTTCTTGCAATACAGAGTCCAACCATACCTTGTGCC...CCCTCCTCTGACTTCAAAGACCCGAGGCTGGGCGCTGTTGGCCTGCGCTGTCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051714.9 |
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| CDS-3UTR TCA 90 bp | CAGCGCAGGCCAACAGCGCCCAGCCTCGGGTCTTTGAAGTCAGAGGAGGGCTGGTCTGACCCAACTGTCTaGTTTACGATCCATTCAATT | + |
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Preference number: 4 (lower is better) Translates to: QRRPTAPSLGSLKSEEGWSDPTV*FTIHSI Trigger: AATTGAATGGATCGTAAATCAGACAGTTGGGTCAGA...CCAGCCCTCCTCTGACTTCAAAGACCCGAGGCTGGGCGCTGTTGGCCTGCGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051714.9 |
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| CDS-3UTR TCA 90 bp | CAGCGCAGGCCAACAGCGCCCAGCCTCGGGTCTTTGAAGTCAGAGGAGGGCTGGTTTCACCTACATCTATaGGCAGAAATATCTCCTGAC | + |
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Preference number: 4 (lower is better) Translates to: QRRPTAPSLGSLKSEEGWFHLHL*AEISPD Trigger: GTCAGGAGATATTTCTGCTCATAGATGTAGGTGAAA...CCAGCCCTCCTCTGACTTCAAAGACCCGAGGCTGGGCGCTGTTGGCCTGCGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051714.9 |
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| CDS-3UTR TCA 90 bp | AGGCCAACAGCGCCCAGCCTCGGGTCTTTGAAGTCAGAGGAGGGCTGGGTCTGGCCTGTGAGGATAAAGTaGCATTTGACTCAAGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: RPTAPSLGSLKSEEGWVWPVRIK*HLTQGF Trigger: AAACCCTTGAGTCAAATGTCACTTTATCCTCACAGG...CCAGACCCAGCCCTCCTCTGACTTCAAAGACCCGAGGCTGGGCGCTGTTGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051714.9 |
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| CDS-3UTR TCA 90 bp | AAACAACAGCAACTTTATTTTTCCACACGTGGTCAACGTGTGCTTGTCTGCTCTACAGTTCAGAGTATCTaGGCAGGGGCAGAAGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: KQQQLYFSTRGQRVLVCSTVQSI*AGAEAQ Trigger: CTGGGCTTCTGCCCCTGCTCAGATACTCTGAACTGT...AGAGCAGACAAGCACACGTTGACCACGTGTGGAAAAATAAAGTTGCTGTTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051714.9 |
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| CDS-3UTR CCA 90 bp | CAACAGCAACTTTATTTTTCCACACGTGGTCAACGTGTGCTTGTCTGCTCTGGAAGACAGGACACTTGGTaGTTCCTGGCTCATTGTACT | + |
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Preference number: 4 (lower is better) Translates to: QQQLYFSTRGQRVLVCSGRQDTW*FLAHCT Trigger: AGTACAATGAGCCAGGAACCACCAAGTGTCCTGTCT...TCCAGAGCAGACAAGCACACGTTGACCACGTGTGGAAAAATAAAGTTGCTGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051714.9 |
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| CDS-3UTR TCA 90 bp | AAACAACAGCAACTTTATTTTTCCACACGTGGTCAACGTGTGCTTGTCTGCTCTTGGCTCATTGTACTCTaGAAGCTTCAAGAGGTCAAG | + |
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Preference number: 4 (lower is better) Translates to: KQQQLYFSTRGQRVLVCSWLIVL*KLQEVK Trigger: CTTGACCTCTTGAAGCTTTCAGAGTACAATGAGCCA...AGAGCAGACAAGCACACGTTGACCACGTGTGGAAAAATAAAGTTGCTGTTGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051714.9 |
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| CDS-3UTR TCA 90 bp | CAACAGCAACTTTATTTTTCCACACGTGGTCAACGTGTGCTTGTCTGCTCTGGATTCAATAAGTATGTATaGGATGAGTTCAGGCATCCA | + |
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Preference number: 4 (lower is better) Translates to: QQQLYFSTRGQRVLVCSGFNKYV*DEFRHP Trigger: TGGATGCCTGAACTCATCTCATACATACTTATTGAA...TCCAGAGCAGACAAGCACACGTTGACCACGTGTGGAAAAATAAAGTTGCTGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051714.9 |
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| CDS-3UTR CCA 90 bp | TGGACAAACAACAGCAACTTTATTTTTCCACACGTGGTCAACGTGTGCTTGTCTGTCCTACTGAAGTTTTaGCCAAACTTCATCACGGAT | + |
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Preference number: 4 (lower is better) Translates to: WTNNSNFIFPHVVNVCLSVLLKF*PNFITD Trigger: ATCCGTGATGAAGTTTGGCCAAAACTTCAGTAGGAC...AGACAAGCACACGTTGACCACGTGTGGAAAAATAAAGTTGCTGTTGTTTGTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051714.9 |
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| CDS-3UTR TCA 90 bp | AAACAACAGCAACTTTATTTTTCCACACGTGGTCAACGTGTGCTTGTCTGCTCTTCCTTTATTCTTCTCTaGCCCAACTGTCTGATTTAC | + |
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Preference number: 4 (lower is better) Translates to: KQQQLYFSTRGQRVLVCSSFILL*PNCLIY Trigger: GTAAATCAGACAGTTGGGTCAGAGAAGAATAAAGGA...AGAGCAGACAAGCACACGTTGACCACGTGTGGAAAAATAAAGTTGCTGTTGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051714.9 |
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| CDS-3UTR CAA 90 bp | GGTGTGTGGGTGAGGGATGAGGGCCCCGACAGCGCAGGCCAACAGCGCCCAGCCAAGCAGACAGGACACTaGGTGGTTCCTGGCTCATTG | + |
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Preference number: 5 (lower is better) Translates to: GVWVRDEGPDSAGQQRPAKQTGH*VVPGSL Trigger: CAATGAGCCAGGAACCACCAAGTGTCCTGTCTGCTT...GGCTGGGCGCTGTTGGCCTGCGCTGTCGGGGCCCTCATCCCTCACCCACACACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051714.9 |
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| CDS-3UTR CAA 90 bp | GGTGTGTGGGTGAGGGATGAGGGCCCCGACAGCGCAGGCCAACAGCGCCCAGCCGTGCTGCTAGCATTGTaGCACAGATCAGTGTCACAG | + |
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Preference number: 5 (lower is better) Translates to: GVWVRDEGPDSAGQQRPAVLLAL*HRSVSQ Trigger: CTGTGACACTGATCTGTGCAACAATGCTAGCAGCAC...GGCTGGGCGCTGTTGGCCTGCGCTGTCGGGGCCCTCATCCCTCACCCACACACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051714.9 |
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| CDS TCA 90 bp | TTGGCCAAACTTCATCACGGATCCTTCCTGACAGTTCAGAGTATCTaGGCAGGGGCAGAAGCCCAGCAGAGAGAGGAGCAGGACATACTG | + |
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Preference number: 5 (lower is better) Translates to: LAKLHHGSFLTVQSI*AGAEAQQREEQDIL Trigger: CAGTATGTCCTGCTCCTCTCTCTGCTGGGCTTCTGCCCCTGCTCAGATACTCTGAACTGTCAGGAAGGATCCGTGATGAAGTTTGGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051714.9 ENSMUST00000206826.2 |
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| CDS TCA 90 bp | GATGTCCTACTGAAGTTTTGGCCAAACTTCATCACGGATCCTTCCTaGCAGTTCAGAGTATCTGAGCAGGGGCAGAAGCCCAGCAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: DVLLKFWPNFITDPS*QFRVSEQGQKPSRE Trigger: CTCTCTGCTGGGCTTCTGCCCCTGCTCAGATACTCTGAACTGTCAGGAAGGATCCGTGATGAAGTTTGGCCAAAACTTCAGTAGGACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051714.9 ENSMUST00000206826.2 |
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| CDS-3UTR CAA 90 bp | AAACAACAGCAACTTTATTTTTCCACACGTGGTCAACGTGTGCTTGTCTGCTCTGTGGTTCCTGGCTCATaGTACTCTGAAAGCTTCAAG | + |
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Preference number: 5 (lower is better) Translates to: KQQQLYFSTRGQRVLVCSVVPGS*YSESFK Trigger: CTTGAAGCTTTCAGAGTACAATGAGCCAGGAACCAC...AGAGCAGACAAGCACACGTTGACCACGTGTGGAAAAATAAAGTTGCTGTTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051714.9 |
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| CDS-3UTR CAA 90 bp | AAACAACAGCAACTTTATTTTTCCACACGTGGTCAACGTGTGCTTGTCTGCTCTTGGTTGGACTCTGTATaGCAAGAACCCTTAAAATCC | + |
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Preference number: 5 (lower is better) Translates to: KQQQLYFSTRGQRVLVCSWLDSV*QEPLKS Trigger: GGATTTTAAGGGTTCTTGCAATACAGAGTCCAACCA...AGAGCAGACAAGCACACGTTGACCACGTGTGGAAAAATAAAGTTGCTGTTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051714.9 |
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| CDS TCA 90 bp | ATACTGATGATTCCAATTGTATTTTGGTTGTTCAATAAGTATGTATaGGATGAGTTCAGGCATCCAGAAATGCTAAAAATGGCACTGAGG | + |
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Preference number: 5 (lower is better) Translates to: ILMIPIVFWLFNKYV*DEFRHPEMLKMALR Trigger: CCTCAGTGCCATTTTTAGCATTTCTGGATGCCTGAACTCATCTCATACATACTTATTGAACAACCAAAATACAATTGGAATCATCAGTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051714.9 |
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| CDS TCA 72 bp | CTGAAGTTTTGGCCAAACTTCATCACGGATCCTTCCTaGCAGTTCAGAGTATCTGAGCAGGGGCAGAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: LKFWPNFITDPS*QFRVSEQGQKP Trigger: GGGCTTCTGCCCCTGCTCAGATACTCTGAACTGTCAGGAAGGATCCGTGATGAAGTTTGGCCAAAACTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051714.9 ENSMUST00000206826.2 |
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| CDS CAA 90 bp | CCCTTAAAATCCAAGCAGACAGGACACTTGGTGGTTCCTGGCTCATaGTACTCTGAAAGCTTCAAGAGGTCAAGTAGGACCTTGGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: PLKSKQTGHLVVPGS*YSESFKRSSRTLVL Trigger: CAGCACCAAGGTCCTACTTGACCTCTTGAAGCTTTCAGAGTACAATGAGCCAGGAACCACCAAGTGTCCTGTCTGCTTGGATTTTAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051714.9 |
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| CDS GCA 72 bp | GTTGCACAGATCAGTGTCACAGAAGTGGACATAAGATaGACTCACTATTCCAGGTCCAGGGGAAAACACATC | + |
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Preference number: 6 (lower is better) Translates to: VAQISVTEVDIR*THYSRSRGKHI Trigger: GATGTGTTTTCCCCTGGACCTGGAATAGTGAGTGCATCTTATGTCCACTTCTGTGACACTGATCTGTGCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051714.9 ENSMUST00000206826.2 |
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| CDS CAA 90 bp | GACTCTGTATTGCAAGAACCCTTAAAATCCAAGCAGACAGGACACTaGGTGGTTCCTGGCTCATTGTACTCTGAAAGCTTCAAGAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: DSVLQEPLKSKQTGH*VVPGSLYSESFKRS Trigger: TGACCTCTTGAAGCTTTCAGAGTACAATGAGCCAGGAACCACCAAGTGTCCTGTCTGCTTGGATTTTAAGGGTTCTTGCAATACAGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051714.9 |
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| CDS CAA 72 bp | TTGCAAGAACCCTTAAAATCCAAGCAGACAGGACACTaGGTGGTTCCTGGCTCATTGTACTCTGAAAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LQEPLKSKQTGH*VVPGSLYSESF Trigger: GAAGCTTTCAGAGTACAATGAGCCAGGAACCACCAAGTGTCCTGTCTGCTTGGATTTTAAGGGTTCTTGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051714.9 |
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| CDS TCA 72 bp | CTGTCTGATTTACGATCCATTCAATTGATGTCCTACTaGAGTTTTGGCCAAACTTCATCACGGATCCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LSDLRSIQLMSY*SFGQTSSRILP Trigger: AGGAAGGATCCGTGATGAAGTTTGGCCAAAACTTCAGTAGGACATCAATTGAATGGATCGTAAATCAGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051714.9 ENSMUST00000206826.2 |
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| CDS TCA 72 bp | CACATCTCTCCTTTATTCTTCTCTGACCCAACTGTCTaGTTTACGATCCATTCAATTGATGTCCTACTGAAG | + |
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Preference number: 6 (lower is better) Translates to: HISPLFFSDPTV*FTIHSIDVLLK Trigger: CTTCAGTAGGACATCAATTGAATGGATCGTAAATCAGACAGTTGGGTCAGAGAAGAATAAAGGAGAGATGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051714.9 ENSMUST00000206826.2 |
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