Pregenerated sensors for LYPD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026344Ensembl transcript IDs: ENSMUST00000027582.10, ENSMUST00000159417.2, ENSMUST00000159529.2, ENSMUST00000161361.3, ENSMUST00000162899.8
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCAGCAGTTCCGGAAGGTGTTCTGGCAGGTGCTCTGCTGCCGCCTaGCTCTGCAGCATGCCAACCAAGAGAAACGCCAGCGTGCCCGCT | + |
|
Preference number: 1 (lower is better) Translates to: LSSSGRCSGRCSAAA*LCSMPTKRNASVPA Trigger: AGCGGGCACGCTGGCGTTTCTCTTGGTTGGCATGCTGCAGAGTCAGGCGGCAGCAGAGCACCTGCCAGAACACCTTCCGGAACTGCTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR GCA 90 bp | GAAGGTGTTCTGGCAGGTGCTCTGCTGCCGCCTGACTCTGCAGCATaGCAACCAAGAGAAACGCCAGCGTGCCCGCTTCATCTCCACCAA | + |
|
Preference number: 1 (lower is better) Translates to: EGVLAGALLPPDSAA*QPRETPACPLHLHQ Trigger: TTGGTGGAGATGAAGCGGGCACGCTGGCGTTTCTCTTGGTTGGCATGCTGCAGAGTCAGGCGGCAGCAGAGCACCTGCCAGAACACCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR CCA 90 bp | CCTCTCCTCTACAACGTGTCCTCTCAGCAGTTCCGGAAGGTGTTCTaGCAGGTGCTCTGCTGCCGCCTGACTCTGCAGCATGCCAACCAA | + |
|
Preference number: 1 (lower is better) Translates to: PLLYNVSSQQFRKVF*QVLCCRLTLQHANQ Trigger: TTGGTTGGCATGCTGCAGAGTCAGGCGGCAGCAGAGCACCTGCCAGAACACCTTCCGGAACTGCTGAGAGGACACGTTGTAGAGGAGAGG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR TCA 90 bp | CTTTTCAGACTGAGGCCAAGCCTGGAGAGGCTAAGCCCCAGCCCTTaGGTCCTGAGTCACCACAGACTGGCTCAGAGACCAAACCAGCTG | + |
|
Preference number: 1 (lower is better) Translates to: LFRLRPSLERLSPSP*VLSHHRLAQRPNQL Trigger: CAGCTGGTTTGGTCTCTGAGCCAGTCTGTGGTGACTCAGGACTCAAGGGCTGGGGCTTAGCCTCTCCAGGCTTGGCCTCAGTCTGAAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR CCA 90 bp | TGTTCTTGCCTGCCAGGACTGATTGTGGTGACGTTGGCCGTGTGTTaGATGCCCAATCAGATCCGACGGATCATGGCTGCAGCAAAACCC | + |
|
Preference number: 1 (lower is better) Translates to: CSCLPGLIVVTLAVC*MPNQIRRIMAAAKP Trigger: GGGTTTTGCTGCAGCCATGATCCGTCGGATCTGATTGGGCATCCAACACACGGCCAACGTCACCACAATCAGTCCTGGCAGGCAAGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR TCA 90 bp | GCCCAATCAGATCCGACGGATCATGGCTGCAGCAAAACCCAAACATaGCTGGACCAGAACGTACTTCAGGGCATACATGATCCTCCTGCC | + |
|
Preference number: 1 (lower is better) Translates to: AQSDPTDHGCSKTQT*LDQNVLQGIHDPPA Trigger: GGCAGGAGGATCATGTATGCCCTGAAGTACGTTCTGGTCCAGTCATGTTTGGGTTTTGCTGCAGCCATGATCCGTCGGATCTGATTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR TCA 90 bp | GCAGAATTCAGTGACGGAGGAACAAAAGCAGCCTGGGAAGCTTTGTaGAAACACACAGCTTCCCCATGCACGCAGGCATCTGTTCCCTTC | + |
|
Preference number: 1 (lower is better) Translates to: AEFSDGGTKAAWEAL*KHTASPCTQASVPF Trigger: GAAGGGAACAGATGCCTGCGTGCATGGGGAAGCTGTGTGTTTTCACAAAGCTTCCCAGGCTGCTTTTGTTCCTCCGTCACTGAATTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR TCA 90 bp | AGAATGGAAGCTCAAGGCTTTGGGAAAGGCAGATGCGTATCTCAATaGCTTCTAAGGGCTGGTTCTTCCAGGCTAGCCTTGGCGGTGGTT | + |
|
Preference number: 1 (lower is better) Translates to: RMEAQGFGKGRCVSQ*LLRAGSSRLALAVV Trigger: AACCACCGCCAAGGCTAGCCTGGAAGAACCAGCCCTTAGAAGTCATTGAGATACGCATCTGCCTTTCCCAAAGCCTTGAGCTTCCATTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR TCA 90 bp | TTGACCTCTCTGGGTTGTCAGAAGAAGAGAGACCCACATGGGAAGTaGGGGCTCAGCACAGAACCTGGAGCAAAAGAAGCTAGTTCCCTT | + |
|
Preference number: 1 (lower is better) Translates to: LTSLGCQKKRDPHGK*GLSTEPGAKEASSL Trigger: AAGGGAACTAGCTTCTTTTGCTCCAGGTTCTGTGCTGAGCCCTCACTTCCCATGTGGGTCTCTCTTCTTCTGACAACCCAGAGAGGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR TCA 90 bp | AGTGCCTCACGCACAGGGGCAGGGCTTAGTAGTACCTCTTCTCCATaGCTACCTGTCCCTGATTTTACTTCTCCTGAAACTGGATGCAAA | + |
|
Preference number: 1 (lower is better) Translates to: SASRTGAGLSSTSSP*LPVPDFTSPETGCK Trigger: TTTGCATCCAGTTTCAGGAGAAGTAAAATCAGGGACAGGTAGTCATGGAGAAGAGGTACTACTAAGCCCTGCCCCTGTGCGTGAGGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CCA 90 bp | CGTGTTTATGTAAGCCAGAATGTAATGGGCATTCATATGGATGTCTaGATACTCAGTGCCTCACGCACAGGGGCAGGGCTTAGTAGTACC | + |
|
Preference number: 1 (lower is better) Translates to: RVYVSQNVMGIHMDV*ILSASRTGAGLSST Trigger: GGTACTACTAAGCCCTGCCCCTGTGCGTGAGGCACTGAGTATCCAGACATCCATATGAATGCCCATTACATTCTGGCTTACATAAACACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CCA 90 bp | GAATCAGGTCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCAGGACCTCCGGAAGAGCAGTCAATGCTCTTA | + |
|
Preference number: 1 (lower is better) Translates to: ESGLVTDGCEPPCGC*DLNSGPPEEQSMLL Trigger: TAAGAGCATTGACTGCTCTTCCGGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGACCTGATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR TCA 90 bp | GTGCTCCATCCCCATACCCTAACAAACACATCCTTGGATAATGGTTaGACTTGTTCTGCAGAATTCAGTGACGGAGGAACAAAAGCAGCC | + |
|
Preference number: 1 (lower is better) Translates to: VLHPHTLTNTSLDNG*TCSAEFSDGGTKAA Trigger: GGCTGCTTTTGTTCCTCCGTCACTGAATTCTGCAGAACAAGTTCAACCATTATCCAAGGATGTGTTTGTTAGGGTATGGGGATGGAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CCA 90 bp | TCCCATTTGTTATTCAATCTCAATCTTACAGTCAGGATTTTACCCTaGCTGAAACTACAGAGCAAGCTCCAGTTCAGTCTTCCCCATCCC | + |
|
Preference number: 1 (lower is better) Translates to: SHLLFNLNLTVRILP*LKLQSKLQFSLPHP Trigger: GGGATGGGGAAGACTGAACTGGAGCTTGCTCTGTAGTTTCAGCCAGGGTAAAATCCTGACTGTAAGATTGAGATTGAATAACAAATGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CCA 90 bp | ATAGCATTGTACCTTGAGAGGAAAACGGAGCCTGTATCACATGTTTaGGAGATAGGCAGCTTTCTCCTTTGTTCCGTGAAGAGACTGATT | + |
|
Preference number: 1 (lower is better) Translates to: IALYLERKTEPVSHV*EIGSFLLCSVKRLI Trigger: AATCAGTCTCTTCACGGAACAAAGGAGAAAGCTGCCTATCTCCCAAACATGTGATACAGGCTCCGTTTTCCTCTCAAGGTACAATGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR GCA 90 bp | GCTGGGAACAGAACTTACATCTTAACTGCTGAGCTATCTCTTCAGTaGTACCAAATTCTTGCTTTAAATAACATCAGCCCTCTCATGGGA | + |
|
Preference number: 1 (lower is better) Translates to: AGNRTYILTAELSLQ*YQILALNNISPLMG Trigger: TCCCATGAGAGGGCTGATGTTATTTAAAGCAAGAATTTGGTAGCACTGAAGAGATAGCTCAGCAGTTAAGATGTAAGTTCTGTTCCCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR TCA 90 bp | ACACACACACACACACACACACACACACACACACACACTGTACTGTaGTTTCATTTGTCATACTTTAGAAGTAGCCGTGTTTATGTAAGC | + |
|
Preference number: 1 (lower is better) Translates to: THTHTHTHTHTHTVL*FHLSYFRSSRVYVS Trigger: GCTTACATAAACACGGCTACTTCTAAAGTATGACAAATGAAATCACAGTACAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR TCA 90 bp | TTCTTTATCAATCTGAAAATGGGACCAATAGATAGCATTGTACCTTaGGAGGAAAACGGAGCCTGTATCACATGTTTGGGAGATAGGCAG | + |
|
Preference number: 1 (lower is better) Translates to: FFINLKMGPIDSIVP*EENGACITCLGDRQ Trigger: CTGCCTATCTCCCAAACATGTGATACAGGCTCCGTTTTCCTCTCAAGGTACAATGCTATCTATTGGTCCCATTTTCAGATTGATAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CCA 90 bp | GCAATTGCCTGTCATTGTAAAATGATAAATTTTGCACAAAGGGTCTaGTTGGCTTCCTGTTCTAGAAAGGCTACCTCTATTCTCACAATG | + |
|
Preference number: 1 (lower is better) Translates to: AIACHCKMINFAQRV*LASCSRKATSILTM Trigger: CATTGTGAGAATAGAGGTAGCCTTTCTAGAACAGGAAGCCAACCAGACCCTTTGTGCAAAATTTATCATTTTACAATGACAGGCAATTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR GCA 90 bp | ACAGAAATTCAGAATGAATTGGTTCAGAGCTTACAAAAGTATTTGTaGACGGCAATCTTGCGTTACTTGAAAGGAGGGAACAAAAAGACT | + |
|
Preference number: 1 (lower is better) Translates to: TEIQNELVQSLQKYL*TAILRYLKGGNKKT Trigger: AGTCTTTTTGTTCCCTCCTTTCAAGTAACGCAAGATTGCCGTGCACAAATACTTTTGTAAGCTCTGAACCAATTCATTCTGAATTTCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| 3UTR GCA 90 bp | TTCTTTGCTTTATCAATAAAGAGTCAGAGTCTTGTGAATTTTAGGTaGTTGTCAGACTATAGATTCGATGTGATAGTGGGAGCCAGAATG | + |
|
Preference number: 1 (lower is better) Translates to: FFALSIKSQSLVNFR*LSDYRFDVIVGARM Trigger: CATTCTGGCTCCCACTATCACATCGAATCTATAGTCTGACAAGCACCTAAAATTCACAAGACTCTGACTCTTTATTGATAAAGCAAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCGCTTCATCTCCACCAAGGACAGCACCAGCTCAGCCCGCAGCCCCCTCATCTGCCTTGAGCCGAAACTaGCTCTCCCCTCCCGCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: PASSPPRTAPAQPAAPSSALSRN*LSPPAK Trigger: TTTTGCGGGAGGGGAGAGCCAGTTTCGGCTCAAGGC...AGATGAGGGGGCTGCGGGCTGAGCTGGTGCTGTCCTTGGTGGAGATGAAGCGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGGTGCTCTGCTGCCGCCTGACTCTGCAGCATGCCAACCAAGAGAAACGCCAGCTAAGCCCCAGCCCTTaGGTCCTGAGTCACCACAGA | + |
|
Preference number: 2 (lower is better) Translates to: QVLCCRLTLQHANQEKRQLSPSP*VLSHHR Trigger: TCTGTGGTGACTCAGGACTCAAGGGCTGGGGCTTAG...CTGGCGTTTCTCTTGGTTGGCATGCTGCAGAGTCAGGCGGCAGCAGAGCACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCGCTTCATCTCCACCAAGGACAGCACCAGCTCAGCCCGCAGCCCCCTCATCTGGAAGCTCAAGGCTTTaGGAAAGGCAGATGCGTATC | + |
|
Preference number: 2 (lower is better) Translates to: PASSPPRTAPAQPAAPSSGSSRL*ERQMRI Trigger: GATACGCATCTGCCTTTCCCAAAGCCTTGAGCTTCC...AGATGAGGGGGCTGCGGGCTGAGCTGGTGCTGTCCTTGGTGGAGATGAAGCGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR CAA 90 bp | ACTTTTCAGACTGAGGCCAAGCCTGGAGAGGCTAAGCCCCAGCCCTaGAGTCCTGAGTCACCACAGACTGGCTCAGAGACCAAACCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: TFQTEAKPGEAKPQP*SPESPQTGSETKPA Trigger: AGCTGGTTTGGTCTCTGAGCCAGTCTGTGGTGACTCAGGACTCAAGGGCTGGGGCTTAGCCTCTCCAGGCTTGGCCTCAGTCTGAAAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTGAGGCCAAGCCTGGAGAGGCTAAGCCCCAGCCCTTGAGTCCTGAGTCACCAGGAAGCTCAAGGCTTTaGGAAAGGCAGATGCGTATC | + |
|
Preference number: 2 (lower is better) Translates to: TEAKPGEAKPQPLSPESPGSSRL*ERQMRI Trigger: GATACGCATCTGCCTTTCCCAAAGCCTTGAGCTTCC...TGGTGACTCAGGACTCAAGGGCTGGGGCTTAGCCTCTCCAGGCTTGGCCTCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR CAA 90 bp | CTGTTCTTGCCTGCCAGGACTGATTGTGGTGACGTTGGCCGTGTGTaGGATGCCCAATCAGATCCGACGGATCATGGCTGCAGCAAAACC | + |
|
Preference number: 2 (lower is better) Translates to: LFLPARTDCGDVGRV*DAQSDPTDHGCSKT Trigger: GGTTTTGCTGCAGCCATGATCCGTCGGATCTGATTGGGCATCCAACACACGGCCAACGTCACCACAATCAGTCCTGGCAGGCAAGAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTCACCACAGACTGGCTCAGAGACCAAACCAGCTGGGTCCACCCCAGAAAATAAGAGACTCGGGAAGGTaGGAGACGAAGGGCCAGACA | + |
|
Preference number: 2 (lower is better) Translates to: SHHRLAQRPNQLGPPQKIRDSGR*ETKGQT Trigger: TGTCTGGCCCTTCGTCTCTCACCTTCCCGAGTCTCT...TATTTTCTGGGGTGGACCCAGCTGGTTTGGTCTCTGAGCCAGTCTGTGGTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCTTCTACCTCAGCTCTGTGGTCAACCCTCTCCTCTACAACGTGTCCTCTCAGTTCTGGCAGGTGCTCTaGTGCCGCCTGACTCTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: FFYLSSVVNPLLYNVSSQFWQVL*CRLTLQ Trigger: CTGCAGAGTCAGGCGGCAGCAGAGCACCTGCCAGAA...CTGAGAGGACACGTTGTAGAGGAGAGGGTTGACCACAGAGCTGAGGTAGAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTGGAGAGGCTAAGCCCCAGCCCTTGAGTCCTGAGTCACCACAGACTGGCTCAATGACTTCTAAGGGCTaGTTCTTCCAGGCTAGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: PGEAKPQPLSPESPQTGSMTSKG*FFQASL Trigger: AAGGCTAGCCTGGAAGAACCAGCCCTTAGAAGTCAT...TGAGCCAGTCTGTGGTGACTCAGGACTCAAGGGCTGGGGCTTAGCCTCTCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGATCCGACGGATCATGGCTGCAGCAAAACCCAAACATGACTGGACCAGAACGGCCTTGAGCCGAAACTaGCTCTCCCCTCCCGCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: QIRRIMAAAKPKHDWTRTALSRN*LSPPAK Trigger: TTTTGCGGGAGGGGAGAGCCAGTTTCGGCTCAAGGC...CGTTCTGGTCCAGTCATGTTTGGGTTTTGCTGCAGCCATGATCCGTCGGATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGACTGGCTCAGAGACCAAACCAGCTGGGTCCACCCCAGAAAATAGTTTACAGGCCTTGAGCCGAAACTaGCTCTCCCCTCCCGCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: QTGSETKPAGSTPENSLQALSRN*LSPPAK Trigger: TTTTGCGGGAGGGGAGAGCCAGTTTCGGCTCAAGGC...CTGTAAACTATTTTCTGGGGTGGACCCAGCTGGTTTGGTCTCTGAGCCAGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCTTCTACCTCAGCTCTGTGGTCAACCCTCTCCTCTACAACGTGTCCTCTCAGAAGCACTTTTCAGACTaGGGCCAAGCCTGGAGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: FFYLSSVVNPLLYNVSSQKHFSD*GQAWRG Trigger: GCCTCTCCAGGCTTGGCCTCAGTCTGAAAAGTGCTT...CTGAGAGGACACGTTGTAGAGGAGAGGGTTGACCACAGAGCTGAGGTAGAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGATCCGACGGATCATGGCTGCAGCAAAACCCAAACATGACTGGACCAGAACGCAGGAGCAGGAAGTATaGATGGCAAGTTCAGAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: QIRRIMAAAKPKHDWTRTQEQEV*MASSEA Trigger: GGCTTCTGAACTTGCCATTCATACTTCCTGCTCCTG...CGTTCTGGTCCAGTCATGTTTGGGTTTTGCTGCAGCCATGATCCGTCGGATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGTCACCACAGACTGGCTCAGAGACCAAACCAGCTGGGTCCACCCCAGAAAATTTAACCAGATTGGGATaGGAGGGTCTGGACTTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: ESPQTGSETKPAGSTPENLTRLG*EGLDFL Trigger: CAGAAAGTCCAGACCCTCCCATCCCAATCTGGTTAA...ATTTTCTGGGGTGGACCCAGCTGGTTTGGTCTCTGAGCCAGTCTGTGGTGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR CAA 90 bp | GGTCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCAGGACCTCCGGAAGAGCAGTCAATGCTCTTAACCGCT | + |
|
Preference number: 2 (lower is better) Translates to: GLVTDGCEPPCGCWD*NSGPPEEQSMLLTA Trigger: AGCGGTTAAGAGCATTGACTGCTCTTCCGGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTCAGAGACCAAACCAGCTGGGTCCACCCCAGAAAATAGTTTACAGGAGCAGGTTAACCAGATTGGGATaGGAGGGTCTGGACTTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: AQRPNQLGPPQKIVYRSRLTRLG*EGLDFL Trigger: CAGAAAGTCCAGACCCTCCCATCCCAATCTGGTTAA...CCTGCTCCTGTAAACTATTTTCTGGGGTGGACCCAGCTGGTTTGGTCTCTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR CAA 90 bp | TCTCCTTTGTTCCGTGAAGAGACTGATTGTTTTGACCTCTCTGGGTaGTCAGAAGAAGAGAGACCCACATGGGAAGTGAGGGCTCAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: SPLFREETDCFDLSG*SEEERPTWEVRAQH Trigger: GTGCTGAGCCCTCACTTCCCATGTGGGTCTCTCTTCTTCTGACAACCCAGAGAGGTCAAAACAATCAGTCTCTTCACGGAACAAAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGATCCGACGGATCATGGCTGCAGCAAAACCCAAACATGACTGGACCAGAACGAGATGCGTATCTCAATaGCTTCTAAGGGCTGGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: QIRRIMAAAKPKHDWTRTRCVSQ*LLRAGS Trigger: AGAACCAGCCCTTAGAAGTCATTGAGATACGCATCT...CGTTCTGGTCCAGTCATGTTTGGGTTTTGCTGCAGCCATGATCCGTCGGATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCTTCTACCTCAGCTCTGTGGTCAACCCTCTCCTCTACAACGTGTCCTCTCAGGACTGTGACTCCTACTaGGACAGAATGGAAGCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: FFYLSSVVNPLLYNVSSQDCDSY*DRMEAQ Trigger: TTGAGCTTCCATTCTGTCCCAGTAGGAGTCACAGTC...CTGAGAGGACACGTTGTAGAGGAGAGGGTTGACCACAGAGCTGAGGTAGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGCCATTGGTGGCGCCTGTAGGCCCAGCATTCCATTTTCCTAGATTTCCTAAGCATGTCTGCTTGCCCTaGGTCCTTAATTACTCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: LPLVAPVGPAFHFPRFPKHVCLP*VLNYSA Trigger: AGCTGAGTAATTAAGGACCCAGGGCAAGCAGACATG...CTTAGGAAATCTAGGAAAATGGAATGCTGGGCCTACAGGCGCCACCAATGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGCCATTGGTGGCGCCTGTAGGCCCAGCATTCCATTTTCCTAGATTTCCTAAGACTTGGGCAGTTCCTTaGGGTAGTTGGTGCATATGT | + |
|
Preference number: 2 (lower is better) Translates to: LPLVAPVGPAFHFPRFPKTWAVP*GSWCIC Trigger: ACATATGCACCAACTACCCCAAGGAACTGCCCAAGT...CTTAGGAAATCTAGGAAAATGGAATGCTGGGCCTACAGGCGCCACCAATGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGCCATTGGTGGCGCCTGTAGGCCCAGCATTCCATTTTCCTAGATTTCCTAAGAGATGCGTATCTCAATaGCTTCTAAGGGCTGGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: LPLVAPVGPAFHFPRFPKRCVSQ*LLRAGS Trigger: AGAACCAGCCCTTAGAAGTCATTGAGATACGCATCT...CTTAGGAAATCTAGGAAAATGGAATGCTGGGCCTACAGGCGCCACCAATGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CAA 90 bp | GAGATAGGCAGCTTTCTCCTTTGTTCCGTGAAGAGACTGATTGTTTaGACCTCTCTGGGTTGTCAGAAGAAGAGAGACCCACATGGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: EIGSFLLCSVKRLIV*TSLGCQKKRDPHGK Trigger: CTTCCCATGTGGGTCTCTCTTCTTCTGACAACCCAGAGAGGTCAAAACAATCAGTCTCTTCACGGAACAAAGGAGAAAGCTGCCTATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGTATTTGTGCACGGCAATCTTGCGTTACTTGAAAGGAGGGAACAAAAAGACTAGAGACTCGGGAAGGTaGGAGACGAAGGGCCAGACA | + |
|
Preference number: 2 (lower is better) Translates to: KYLCTAILRYLKGGNKKTRDSGR*ETKGQT Trigger: TGTCTGGCCCTTCGTCTCTCACCTTCCCGAGTCTCT...AGTCTTTTTGTTCCCTCCTTTCAAGTAACGCAAGATTGCCGTGCACAAATACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGCCATTGGTGGCGCCTGTAGGCCCAGCATTCCATTTTCCTAGATTTCCTAAGGCTTCCAAAAGTGTTTaGAAAGAAGCAGAGATGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LPLVAPVGPAFHFPRFPKASKSV*KEAEML Trigger: CAGCATCTCTGCTTCTTTTCAAACACTTTTGGAAGC...CTTAGGAAATCTAGGAAAATGGAATGCTGGGCCTACAGGCGCCACCAATGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAGCCTTGAGCCGAAACTGGCTCTCCCCTCCCGCAAAAGCAAAGTTACCTTCATTACAAAAGTATTTGTaGACGGCAATCTTGCGTTAC | + |
|
Preference number: 2 (lower is better) Translates to: EALSRNWLSPPAKAKLPSLQKYL*TAILRY Trigger: GTAACGCAAGATTGCCGTGCACAAATACTTTTGTAA...TGAAGGTAACTTTGCTTTTGCGGGAGGGGAGAGCCAGTTTCGGCTCAAGGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAGTTCTCATTTTGTTCCCTATTTGCTGCCACTCATTCAAATGGTCTCCCATTCTCCGGGTATGCAAATaGGTGTCCAGTCAGCTAATG | + |
|
Preference number: 2 (lower is better) Translates to: GVLILFPICCHSFKWSPILRVCK*VSSQLM Trigger: CATTAGCTGACTGGACACTCATTTGCATACCCGGAG...AATGGGAGACCATTTGAATGAGTGGCAGCAAATAGGGAACAAAATGAGAACTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCTTCTACCTCAGCTCTGTGGTCAACCCTCTCCTCTACAACGTGTCCTCTCAGTTACAAAAGTATTTGTaGACGGCAATCTTGCGTTAC | + |
|
Preference number: 2 (lower is better) Translates to: FFYLSSVVNPLLYNVSSQLQKYL*TAILRY Trigger: GTAACGCAAGATTGCCGTGCACAAATACTTTTGTAA...CTGAGAGGACACGTTGTAGAGGAGAGGGTTGACCACAGAGCTGAGGTAGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTTCAGAAGCCTTGAGCCGAAACTGGCTCTCCCCTCCCGCAAAAGCAAAGTTATTACAAAAGTATTTGTaGACGGCAATCTTGCGTTAC | + |
|
Preference number: 2 (lower is better) Translates to: SSEALSRNWLSPPAKAKLLQKYL*TAILRY Trigger: GTAACGCAAGATTGCCGTGCACAAATACTTTTGTAA...TAACTTTGCTTTTGCGGGAGGGGAGAGCCAGTTTCGGCTCAAGGCTTCTGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR-3UTR TCA 90 bp | CTACACACAGAAATTCAGAATGAATTGGTTCAGAGCTTACAAAAGTATTTGTGCAGAGACTCGGGAAGGTaGGAGACGAAGGGCCAGACA | + |
|
Preference number: 2 (lower is better) Translates to: LHTEIQNELVQSLQKYLCRDSGR*ETKGQT Trigger: TGTCTGGCCCTTCGTCTCTCACCTTCCCGAGTCTCT...GCACAAATACTTTTGTAAGCTCTGAACCAATTCATTCTGAATTTCTGTGTGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTATCCACACTCCAAGACTGGTATTACTGTTAGGTTCATCATATCCACCCAGTTCTCACTACCTTTGCTaGTGGGCTTTCAAAGCTATG | + |
|
Preference number: 2 (lower is better) Translates to: SIHTPRLVLLLGSSYPPSSHYLC*WAFKAM Trigger: CATAGCTTTGAAAGCCCACCAGCAAAGGTAGTGAGA...ACTGGGTGGATATGATGAACCTAACAGTAATACCAGTCTTGGAGTGTGGATACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CAA 90 bp | ATTGCCTGTCATTGTAAAATGATAAATTTTGCACAAAGGGTCTGGTaGGCTTCCTGTTCTAGAAAGGCTACCTCTATTCTCACAATGCCC | + |
|
Preference number: 2 (lower is better) Translates to: IACHCKMINFAQRVW*ASCSRKATSILTMP Trigger: GGGCATTGTGAGAATAGAGGTAGCCTTTCTAGAACAGGAAGCCAACCAGACCCTTTGTGCAAAATTTATCATTTTACAATGACAGGCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGGAAGCAAATTCAAAGGGAAGAAATAAGCAGATTGGTGTGTATTTCAAAGCCATTCATATGGATGTCTaGATACTCAGTGCCTCACGC | + |
|
Preference number: 2 (lower is better) Translates to: REANSKGRNKQIGVYFKAIHMDV*ILSASR Trigger: GCGTGAGGCACTGAGTATCCAGACATCCATATGAAT...GGCTTTGAAATACACACCAATCTGCTTATTTCTTCCCTTTGAATTTGCTTCCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CAA 90 bp | CATTTTGTTCCCTATTTGCTGCCACTCATTCAAATGGTCTCCCATTaGTTATTCAATCTCAATCTTACAGTCAGGATTTTACCCTGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: HFVPYLLPLIQMVSH*LFNLNLTVRILPWL Trigger: CAGCCAGGGTAAAATCCTGACTGTAAGATTGAGATTGAATAACAAATGGGAGACCATTTGAATGAGTGGCAGCAAATAGGGAACAAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CAA 90 bp | CACACAGAAATTCAGAATGAATTGGTTCAGAGCTTACAAAAGTATTaGTGCACGGCAATCTTGCGTTACTTGAAAGGAGGGAACAAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: HTEIQNELVQSLQKY*CTAILRYLKGGNKK Trigger: CTTTTTGTTCCCTCCTTTCAAGTAACGCAAGATTGCCGTGCACAAATACTTTTGTAAGCTCTGAACCAATTCATTCTGAATTTCTGTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| 3UTR TCA 72 bp | CTGAGGCCAAGCCTGGAGAGGCTAAGCCCCAGCCCTTaGGTCCTGAGTCACCACAGACTGGCTCAGAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: LRPSLERLSPSP*VLSHHRLAQRP Trigger: TGGTCTCTGAGCCAGTCTGTGGTGACTCAGGACTCAAGGGCTGGGGCTTAGCCTCTCCAGGCTTGGCCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGAGCAGCACTGCTTCTGTGGGGCCTCATCATTCCTGGCCAGTCACACTGCAGCTAAGCCCCAGCCCTaGAGTCCTGAGTCACCACAG | + |
|
Preference number: 3 (lower is better) Translates to: AEQHCFCGASSFLASHTAAKPQP*SPESPQ Trigger: CTGTGGTGACTCAGGACTCAAGGGCTGGGGCTTAGC...TGCAGTGTGACTGGCCAGGAATGATGAGGCCCCACAGAAGCAGTGCTGCTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR GCA 72 bp | GACTCTGCAGCATGCCAACCAAGAGAAACGCCAGCGTaGCCGCTTCATCTCCACCAAGGACAGCACCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: DSAACQPRETPA*PLHLHQGQHQL Trigger: GAGCTGGTGCTGTCCTTGGTGGAGATGAAGCGGGCACGCTGGCGTTTCTCTTGGTTGGCATGCTGCAGAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR GCA 72 bp | TCTCAGCAGTTCCGGAAGGTGTTCTGGCAGGTGCTCTaGTGCCGCCTGACTCTGCAGCATGCCAACCAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SQQFRKVFWQVL*CRLTLQHANQE Trigger: CTCTTGGTTGGCATGCTGCAGAGTCAGGCGGCAGCAGAGCACCTGCCAGAACACCTTCCGGAACTGCTGAGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR GCA 72 bp | CTTCTGTGGGGCCTCATCATTCCTGGCCAGTCACACTaGAGCTCAGTGCTACAAAAGCGGAGGGTGTGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: LLWGLIIPGQSH*SSVLQKRRVCP Trigger: GGGGCACACCCTCCGCTTTTGTAGCACTGAGCTGCAGTGTGACTGGCCAGGAATGATGAGGCCCCACAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CCA 72 bp | TACAACGTGTCCTCTCAGCAGTTCCGGAAGGTGTTCTaGCAGGTGCTCTGCTGCCGCCTGACTCTGCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: YNVSSQQFRKVF*QVLCCRLTLQH Trigger: ATGCTGCAGAGTCAGGCGGCAGCAGAGCACCTGCCAGAACACCTTCCGGAACTGCTGAGAGGACACGTTGTA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGAGAGGCTAAGCCCCAGCCCTTGAGTCCTGAGTCACCACAGACTGGCTCATGGAAGCTCAAGGCTTaGGGAAAGGCAGATGCGTAT | + |
|
Preference number: 3 (lower is better) Translates to: PGEAKPQPLSPESPQTGSWKLKA*GKADAY Trigger: ATACGCATCTGCCTTTCCCAAAGCCTTGAGCTTCCA...TGAGCCAGTCTGTGGTGACTCAGGACTCAAGGGCTGGGGCTTAGCCTCTCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR GCA 72 bp | GCCTCATCATTCCTGGCCAGTCACACTGCAGCTCAGTaGTACAAAAGCGGAGGGTGTGCCCCTGTCTGTACA | + |
|
Preference number: 3 (lower is better) Translates to: ASSFLASHTAAQ*YKSGGCAPVCT Trigger: TGTACAGACAGGGGCACACCCTCCGCTTTTGTAGCACTGAGCTGCAGTGTGACTGGCCAGGAATGATGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CCA 72 bp | CTGCCAGGACTGATTGTGGTGACGTTGGCCGTGTGTTaGATGCCCAATCAGATCCGACGGATCATGGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LPGLIVVTLAVC*MPNQIRRIMAA Trigger: TGCAGCCATGATCCGTCGGATCTGATTGGGCATCCAACACACGGCCAACGTCACCACAATCAGTCCTGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR CCA 72 bp | CTGAGCAGCACTGCTTCTGTGGGGCCTCATCATTCCTaGCCAGTCACACTGCAGCTCAGTGCTACAAAAGCG | + |
|
Preference number: 3 (lower is better) Translates to: LSSTASVGPHHS*PVTLQLSATKA Trigger: CGCTTTTGTAGCACTGAGCTGCAGTGTGACTGGCCAGGAATGATGAGGCCCCACAGAAGCAGTGCTGCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CCA 72 bp | GTTCTAGAAAGGCTACCTCTATTCTCACAATGCCCGTaGGCACATGCCTCAGACTGCCATTGGTGGCGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: VLERLPLFSQCP*AHASDCHWWRL Trigger: CAGGCGCCACCAATGGCAGTCTGAGGCATGTGCCCACGGGCATTGTGAGAATAGAGGTAGCCTTTCTAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CCA 72 bp | GACCTCTCTGGGTTGTCAGAAGAAGAGAGACCCACATaGGAAGTGAGGGCTCAGCACAGAACCTGGAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: DLSGLSEEERPT*EVRAQHRTWSK Trigger: TTTGCTCCAGGTTCTGTGCTGAGCCCTCACTTCCCATGTGGGTCTCTCTTCTTCTGACAACCCAGAGAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR TCA 72 bp | CAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCAGGACCTCCGGAAGAGCAGTCAATGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QMVVSHHVVAGI*TQDLRKSSQCS Trigger: AGAGCATTGACTGCTCTTCCGGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR GCA 72 bp | CCTCCTCCTTCCCAACCTGCCTTCTCTCACTACCTTTaGTGGTGGGCTTTCAAAGCTATGTCTTGTTCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: PPPSQPAFSHYL*WWAFKAMSCSA Trigger: GGCTGAACAAGACATAGCTTTGAAAGCCCACCAGCAAAGGTAGTGAGAGAAGGCAGGTTGGGAAGGAGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR GCA 72 bp | GGTCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCAGGACCTCCGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GLVTDGCEPPCG*WDLNSGPPEEQ Trigger: CTGCTCTTCCGGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CCA 72 bp | CCGTGTGTTGGATGCCCAATCAGATCCGACGGATCATaGCTGCAGCAAAACCCAAACATGACTGGACCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PCVGCPIRSDGS*LQQNPNMTGPE Trigger: TTCTGGTCCAGTCATGTTTGGGTTTTGCTGCAGCCATGATCCGTCGGATCTGATTGGGCATCCAACACACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR CCA 72 bp | CCTCCTTCCCAACCTGCCTTCTCTCACTACCTTTGCTaGTGGGCTTTCAAAGCTATGTCTTGTTCAGCCCGT | + |
|
Preference number: 3 (lower is better) Translates to: PPSQPAFSHYLC*WAFKAMSCSAR Trigger: ACGGGCTGAACAAGACATAGCTTTGAAAGCCCACCAGCAAAGGTAGTGAGAGAAGGCAGGTTGGGAAGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGAAGCCTTGAGCCGAAACTGGCTCTCCCCTCCCGCAAAAGCAAAGTTACCTGGAAGCTCAAGGCTTaGGGAAAGGCAGATGCGTAT | + |
|
Preference number: 3 (lower is better) Translates to: FRSLEPKLALPSRKSKVTWKLKA*GKADAY Trigger: ATACGCATCTGCCTTTCCCAAAGCCTTGAGCTTCCA...GGTAACTTTGCTTTTGCGGGAGGGGAGAGCCAGTTTCGGCTCAAGGCTTCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR TCA 72 bp | GCTCAAGGCTTTGGGAAAGGCAGATGCGTATCTCAATaGCTTCTAAGGGCTGGTTCTTCCAGGCTAGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: AQGFGKGRCVSQ*LLRAGSSRLAL Trigger: CAAGGCTAGCCTGGAAGAACCAGCCCTTAGAAGTCATTGAGATACGCATCTGCCTTTCCCAAAGCCTTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR CCA 72 bp | ATTCTCAAAGAGCAACGTCCCACAGTGTCTGTCGCATaGCACACACAGAAAGCTGTGTGCTCCATCCCCATA | + |
|
Preference number: 3 (lower is better) Translates to: ILKEQRPTVSVA*HTQKAVCSIPI Trigger: TATGGGGATGGAGCACACAGCTTTCTGTGTGTGCCATGCGACAGACACTGTGGGACGTTGCTCTTTGAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CCA 72 bp | CTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCAGGACCTCCGGAAGAGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LVTDGCEPPCGC*DLNSGPPEEQS Trigger: TGACTGCTCTTCCGGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR TCA 72 bp | GATCCGACGGATCATGGCTGCAGCAAAACCCAAACATaGCTGGACCAGAACGTACTTCAGGGCATACATGAT | + |
|
Preference number: 3 (lower is better) Translates to: DPTDHGCSKTQT*LDQNVLQGIHD Trigger: ATCATGTATGCCCTGAAGTACGTTCTGGTCCAGTCATGTTTGGGTTTTGCTGCAGCCATGATCCGTCGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR TCA 72 bp | TTGCCAGTGGCAAAAAGAAGCCGACAAGCACAGAGCTaGAAGATTGGTACCGTTTCTCGGCCAGTAAGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: LPVAKRSRQAQS*KIGTVSRPVSN Trigger: GTTGCTTACTGGCCGAGAAACGGTACCAATCTTTCAGCTCTGTGCTTGTCGGCTTCTTTTTGCCACTGGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR TCA 72 bp | CGCACAGGGGCAGGGCTTAGTAGTACCTCTTCTCCATaGCTACCTGTCCCTGATTTTACTTCTCCTGAAACT | + |
|
Preference number: 3 (lower is better) Translates to: RTGAGLSSTSSP*LPVPDFTSPET Trigger: AGTTTCAGGAGAAGTAAAATCAGGGACAGGTAGTCATGGAGAAGAGGTACTACTAAGCCCTGCCCCTGTGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR TCA 72 bp | AAGTTCAGAGGACTAGAGTTTCCTAGGCCCTCCCTCTaGCAGATGGGTTATGTTCAGAGGGTCTGTCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: KFRGLEFPRPSL*QMGYVQRVCLW Trigger: CCAAAGACAGACCCTCTGAACATAACCCATCTGTCAGAGGGAGGGCCTAGGAAACTCTAGTCCTCTGAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR TCA 72 bp | CAGGAGATGAGACAGTGCAATGCGAAAGGAGATCCATaGTGCTACTTCTCCTCAGCATCCCTCCCCAAATCT | + |
|
Preference number: 3 (lower is better) Translates to: QEMRQCNAKGDP*CYFSSASLPKS Trigger: AGATTTGGGGAGGGATGCTGAGGAGAAGTAGCATCATGGATCTCCTTTCGCATTGCACTGTCTCATCTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR TCA 72 bp | CTAAAGTCTCCTTTCAATGGAGTGACCAGTTCAGGGTaGTTGAGGCTGAGCAAGGCCATGCAGGAAGCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: LKSPFNGVTSSG*LRLSKAMQEAK Trigger: CTTAGCTTCCTGCATGGCCTTGCTCAGCCTCAATCACCCTGAACTGGTCACTCCATTGAAAGGAGACTTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR TCA 72 bp | CCCAGTGCTCATATGGGTACCAGAGATCTGAACTCTTaGGAAGCAGGCACTGTGAAAACTGAGCCATCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PSAHMGTRDLNS*EAGTVKTEPSL Trigger: CAGAGATGGCTCAGTTTTCACAGTGCCTGCTTCTCAAGAGTTCAGATCTCTGGTACCCATATGAGCACTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CCA 72 bp | AGAGTTTTGCAAACACAGGCGACTTGGGCAGTTCCTTaGGGTAGTTGGTGCATATGTTTGGGAAAGGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: RVLQTQATWAVP*GSWCICLGKGQ Trigger: CTGTCCCTTTCCCAAACATATGCACCAACTACCCCAAGGAACTGCCCAAGTCGCCTGTGTTTGCAAAACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR-3UTR CAA 90 bp | TACCTCAGCTCTGTGGTCAACCCTCTCCTCTACAACGTGTCCTCTCAGCAGTTCGCAATCTTGCGTTACTaGAAAGGAGGGAACAAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: YLSSVVNPLLYNVSSQQFAILRY*KGGNKK Trigger: CTTTTTGTTCCCTCCTTTCAAGTAACGCAAGATTGC...GAACTGCTGAGAGGACACGTTGTAGAGGAGAGGGTTGACCACAGAGCTGAGGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR TCA 72 bp | AACATGACTGGACCAGAACGTACTTCAGGGCATACATaGTCCTCCTGCCCTTCTCTGATACCTTCTTCTACC | + |
|
Preference number: 3 (lower is better) Translates to: NMTGPERTSGHT*SSCPSLIPSST Trigger: GGTAGAAGAAGGTATCAGAGAAGGGCAGGAGGATCATGTATGCCCTGAAGTACGTTCTGGTCCAGTCATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR TCA 72 bp | GAGGGCTATGTCAACAGCTCTGCCAGGCAGTTGGTGTaGTTTGTGCGATGCAGACAGACACAATTTATGATG | + |
|
Preference number: 3 (lower is better) Translates to: EGYVNSSARQLV*FVRCRQTQFMM Trigger: CATCATAAATTGTGTCTGTCTGCATCGCACAAATCACACCAACTGCCTGGCAGAGCTGTTGACATAGCCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CCA 72 bp | GGCAAAAAGAAGCCGACAAGCACAGAGCTGAAAGATTaGTACCGTTTCTCGGCCAGTAAGCAACAGAACCAA | + |
|
Preference number: 3 (lower is better) Translates to: GKKKPTSTELKD*YRFSASKQQNQ Trigger: TTGGTTCTGTTGCTTACTGGCCGAGAAACGGTACCAATCTTTCAGCTCTGTGCTTGTCGGCTTCTTTTTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CCA 72 bp | CAAACACAGGCGACTTGGGCAGTTCCTTGGGGTAGTTaGTGCATATGTTTGGGAAAGGGACAGTTGAAGATT | + |
|
Preference number: 3 (lower is better) Translates to: QTQATWAVPWGS*CICLGKGQLKI Trigger: AATCTTCAACTGTCCCTTTCCCAAACATATGCACCAACTACCCCAAGGAACTGCCCAAGTCGCCTGTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGACTGGCTCAGAGACCAAACCAGCTGGGTCCACCCCAGAAAATAGTTTACAGAACAAAAAGACTCCCTaGTCTACCCAGAATAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: QTGSETKPAGSTPENSLQNKKTP*STQNKR Trigger: CCTTTTATTCTGGGTAGACAAGGGAGTCTTTTTGTT...CTGTAAACTATTTTCTGGGGTGGACCCAGCTGGTTTGGTCTCTGAGCCAGTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR TCA 72 bp | TGCAGGAAGCTAAGGGAAGTCTGTATAAGCAGGAGATaGGACAGTGCAATGCGAAAGGAGATCCATGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: CRKLREVCISRR*DSAMRKEIHDA Trigger: AGCATCATGGATCTCCTTTCGCATTGCACTGTCTCATCTCCTGCTTATACAGACTTCCCTTAGCTTCCTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CCA 72 bp | TACCTTGAGAGGAAAACGGAGCCTGTATCACATGTTTaGGAGATAGGCAGCTTTCTCCTTTGTTCCGTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: YLERKTEPVSHV*EIGSFLLCSVK Trigger: CTTCACGGAACAAAGGAGAAAGCTGCCTATCTCCCAAACATGTGATACAGGCTCCGTTTTCCTCTCAAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCATTGGTGGCGCCTGTAGGCCCAGCATTCCATTTTCCTAGATTTCCTAAGGTGATCTGCTTATTATaGCGGAGTTCTCATTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LPLVAPVGPAFHFPRFPKVICLL*RSSHFV Trigger: AACAAAATGAGAACTCCGCAATAATAAGCAGATCAC...CTTAGGAAATCTAGGAAAATGGAATGCTGGGCCTACAGGCGCCACCAATGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR TCA 72 bp | TCAATCTCAATCTTACAGTCAGGATTTTACCCTGGCTaGAACTACAGAGCAAGCTCCAGTTCAGTCTTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: SISILQSGFYPG*NYRASSSSVFP Trigger: GGGGAAGACTGAACTGGAGCTTGCTCTGTAGTTTCAGCCAGGGTAAAATCCTGACTGTAAGATTGAGATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR TCA 72 bp | CAGATTGGTGTGTATTTCAAAGCCCTGGCTGAGGTTTaGCAGAAAGAATCCTTGGAAGTTCAGAGGACTAGA | + |
|
Preference number: 3 (lower is better) Translates to: QIGVYFKALAEV*QKESLEVQRTR Trigger: TCTAGTCCTCTGAACTTCCAAGGATTCTTTCTGTCAAACCTCAGCCAGGGCTTTGAAATACACACCAATCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR TCA 72 bp | CCCCATACCCTAACAAACACATCCTTGGATAATGGTTaGACTTGTTCTGCAGAATTCAGTGACGGAGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: PHTLTNTSLDNG*TCSAEFSDGGT Trigger: TGTTCCTCCGTCACTGAATTCTGCAGAACAAGTTCAACCATTATCCAAGGATGTGTTTGTTAGGGTATGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR TCA 72 bp | GAAACCATTGAAATCCAATCCTTGTTCATGAGTGCTTaGGAGTTTTGCAAACACAGGCGACTTGGGCAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: ETIEIQSLFMSA*EFCKHRRLGQF Trigger: GAACTGCCCAAGTCGCCTGTGTTTGCAAAACTCTCAAGCACTCATGAACAAGGATTGGATTTCAATGGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR TCA 72 bp | AGATCTGAACTCTTGAGAAGCAGGCACTGTGAAAACTaGGCCATCTCTGTAGCCATCTTGTCTGTTTCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: RSELLRSRHCEN*AISVAILSVSL Trigger: TAAAGAAACAGACAAGATGGCTACAGAGATGGCTCAGTTTTCACAGTGCCTGCTTCTCAAGAGTTCAGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR GCA 72 bp | ACTGGTATTACTGTTAGGTTCATCATATCCACCCAGTaGTCATATGGGTACCAGAGATCTGAACTCTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: TGITVRFIISTQ*SYGYQRSELLR Trigger: TCTCAAGAGTTCAGATCTCTGGTACCCATATGAGCACTGGGTGGATATGATGAACCTAACAGTAATACCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CCA 72 bp | ACAGCTACCGTTTCCCTCTACTATGGCTATACCTTATaGGCTCATCTAGAAACAAAAAGACAAAACCAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TATVSLYYGYTL*AHLETKRQNQG Trigger: ACCCTGGTTTTGTCTTTTTGTTTCTAGATGAGCCCATAAGGTATAGCCATAGTAGAGGGAAACGGTAGCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR TCA 72 bp | CACACACACACACACACACACACACACACTGTACTGTaGTTTCATTTGTCATACTTTAGAAGTAGCCGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: HTHTHTHTHTVL*FHLSYFRSSRV Trigger: AACACGGCTACTTCTAAAGTATGACAAATGAAATCACAGTACAGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR TCA 72 bp | AATCTGAAAATGGGACCAATAGATAGCATTGTACCTTaGGAGGAAAACGGAGCCTGTATCACATGTTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: NLKMGPIDSIVP*EENGACITCLG Trigger: TCCCAAACATGTGATACAGGCTCCGTTTTCCTCTCAAGGTACAATGCTATCTATTGGTCCCATTTTCAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR GCA 72 bp | CAGAATGAATTGGTTCAGAGCTTACAAAAGTATTTGTaGACGGCAATCTTGCGTTACTTGAAAGGAGGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: QNELVQSLQKYL*TAILRYLKGGN Trigger: GTTCCCTCCTTTCAAGTAACGCAAGATTGCCGTGCACAAATACTTTTGTAAGCTCTGAACCAATTCATTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTATCCACACTCCAAGACTGGTATTACTGTTAGGTTCATCATATCCACCCAGTATCTCTGTAGCCATCTaGTCTGTTTCTTTATCAATC | + |
|
Preference number: 3 (lower is better) Translates to: SIHTPRLVLLLGSSYPPSISVAI*SVSLSI Trigger: GATTGATAAAGAAACAGACAAGATGGCTACAGAGAT...ACTGGGTGGATATGATGAACCTAACAGTAATACCAGTCTTGGAGTGTGGATACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR GCA 72 bp | TTTTCAATTTTCACGTCCCTCTCTATGTGTCATATATaGATGTATGTCTGCATACCCATGTCGGTACCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: FSIFTSLSMCHI*MYVCIPMSVPV Trigger: TACAGGTACCGACATGGGTATGCAGACATACATGCATATATGACACATAGAGAGGGACGTGAAAATTGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CCA 72 bp | TTATTCAATCTCAATCTTACAGTCAGGATTTTACCCTaGCTGAAACTACAGAGCAAGCTCCAGTTCAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LFNLNLTVRILP*LKLQSKLQFSL Trigger: AAGACTGAACTGGAGCTTGCTCTGTAGTTTCAGCCAGGGTAAAATCCTGACTGTAAGATTGAGATTGAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR GCA 72 bp | GCTTATTATTGCGGAGTTCTCATTTTGTTCCCTATTTaGTGCCACTCATTCAAATGGTCTCCCATTTGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: AYYCGVLILFPI*CHSFKWSPICY Trigger: ATAACAAATGGGAGACCATTTGAATGAGTGGCAGCAAATAGGGAACAAAATGAGAACTCCGCAATAATAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR GCA 72 bp | AGAACTTACATCTTAACTGCTGAGCTATCTCTTCAGTaGTACCAAATTCTTGCTTTAAATAACATCAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: RTYILTAELSLQ*YQILALNNISP Trigger: AGGGCTGATGTTATTTAAAGCAAGAATTTGGTAGCACTGAAGAGATAGCTCAGCAGTTAAGATGTAAGTTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CCA 72 bp | CTCATTTTGTTCCCTATTTGCTGCCACTCATTCAAATaGTCTCCCATTTGTTATTCAATCTCAATCTTACAG | + |
|
Preference number: 3 (lower is better) Translates to: LILFPICCHSFK*SPICYSISILQ Trigger: CTGTAAGATTGAGATTGAATAACAAATGGGAGACCATTTGAATGAGTGGCAGCAAATAGGGAACAAAATGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CCA 72 bp | TGTCATTGTAAAATGATAAATTTTGCACAAAGGGTCTaGTTGGCTTCCTGTTCTAGAAAGGCTACCTCTATT | + |
|
Preference number: 3 (lower is better) Translates to: CHCKMINFAQRV*LASCSRKATSI Trigger: AATAGAGGTAGCCTTTCTAGAACAGGAAGCCAACCAGACCCTTTGTGCAAAATTTATCATTTTACAATGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CCA 72 bp | AACAGCCAGAATAGAGAGTTAACTCTGGACATAGTATaGTATTTATCCTCAACAGTGTATCGTAGAAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: NSQNRELTLDIV*YLSSTVYRRKG Trigger: TCCTTTTCTACGATACACTGTTGAGGATAAATACCATACTATGTCCAGAGTTAACTCTCTATTCTGGCTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| CDS-3UTR TCA 90 bp | GCGTGCCCGCTTCATCTCCACCAAGGACAGCACCAGCTCAGCCCGCAGCCCCCTGGACTGGTACCCAGCTaGAGCAATGAGACAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ACPLHLHQGQHQLSPQPPGLVPS*SNETGC Trigger: GCAGCCTGTCTCATTGCTTCAGCTGGGTACCAGTCC...AGGGGGCTGCGGGCTGAGCTGGTGCTGTCCTTGGTGGAGATGAAGCGGGCACGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| CDS-3UTR TCA 90 bp | CGTGCCCGCTTCATCTCCACCAAGGACAGCACCAGCTCAGCCCGCAGCCCCCTCGGGTGTTGCAGCAGCTaGTGCACACGGAGTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RARFISTKDSTSSARSPLGCCSS*CTRSSV Trigger: AACTGAACTCCGTGTGCATCAGCTGCTGCAACACCC...GAGGGGGCTGCGGGCTGAGCTGGTGCTGTCCTTGGTGGAGATGAAGCGGGCACG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| CDS-3UTR TCA 90 bp | CCCGCTTCATCTCCACCAAGGACAGCACCAGCTCAGCCCGCAGCCCCCTCATCTGGACTGGTACCCAGCTaGAGCAATGAGACAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PASSPPRTAPAQPAAPSSGLVPS*SNETGC Trigger: GCAGCCTGTCTCATTGCTTCAGCTGGGTACCAGTCC...AGATGAGGGGGCTGCGGGCTGAGCTGGTGCTGTCCTTGGTGGAGATGAAGCGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR CAA 72 bp | ACTGAGGCCAAGCCTGGAGAGGCTAAGCCCCAGCCCTaGAGTCCTGAGTCACCACAGACTGGCTCAGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: TEAKPGEAKPQP*SPESPQTGSET Trigger: GGTCTCTGAGCCAGTCTGTGGTGACTCAGGACTCAAGGGCTGGGGCTTAGCCTCTCCAGGCTTGGCCTCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| CDS-3UTR CCA 90 bp | GGTGAGAGACGAAGGGCCAGACAGGTGAGGCAGCAGGGGTTGGCATCTCCTTTATTGCAGCGCCAGCCCTaGAAGCCAGAACAATCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GERRRARQVRQQGLASPLLQRQP*KPEQSA Trigger: TGCGGATTGTTCTGGCTTCCAGGGCTGGCGCTGCAA...TAAAGGAGATGCCAACCCCTGCTGCCTCACCTGTCTGGCCCTTCGTCTCTCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTAAGGGCTGGTTCTTCCAGGCTAGCCTTGGCGGTGGTTAACCAGATTGGGTGGGCCTCGGCCCATTaGAAAGAGGGGTGTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLRAGSSRLALAVVNQIGWASAH*KEGCCS Trigger: GCTGCAACACCCCTCTTTGCAATGGGCCGAGGCCCA...CCCAATCTGGTTAACCACCGCCAAGGCTAGCCTGGAAGAACCAGCCCTTAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR CAA 72 bp | CCTGCCAGGACTGATTGTGGTGACGTTGGCCGTGTGTaGGATGCCCAATCAGATCCGACGGATCATGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PARTDCGDVGRV*DAQSDPTDHGC Trigger: GCAGCCATGATCCGTCGGATCTGATTGGGCATCCAACACACGGCCAACGTCACCACAATCAGTCCTGGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR CAA 72 bp | CTCACAATGCCCGTGGGCACATGCCTCAGACTGCCATaGGTGGCGCCTGTAGGCCCAGCATTCCATTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LTMPVGTCLRLP*VAPVGPAFHFP Trigger: AGGAAAATGGAATGCTGGGCCTACAGGCGCCACCAATGGCAGTCTGAGGCATGTGCCCACGGGCATTGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| CDS-3UTR TCA 90 bp | TTGAGTCCTGAGTCACCACAGACTGGCTCAGAGACCAAACCAGCTGGGTCCACCGGGTGTTGCAGCAGCTaGTGCACACGGAGTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSPESPQTGSETKPAGSTGCCSS*CTRSSV Trigger: AACTGAACTCCGTGTGCATCAGCTGCTGCAACACCC...GGTGGACCCAGCTGGTTTGGTCTCTGAGCCAGTCTGTGGTGACTCAGGACTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| CDS-3UTR CCA 90 bp | AGTCACCACAGACTGGCTCAGAGACCAAACCAGCTGGGTCCACCCCAGAAAATAAGTGGTGAGAAGCCCTaGCCTGATGGCCGAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHHRLAQRPNQLGPPQKISGEKP*PDGRGR Trigger: TCTGCCTCGGCCATCAGGCCAGGGCTTCTCACCACT...TATTTTCTGGGGTGGACCCAGCTGGTTTGGTCTCTGAGCCAGTCTGTGGTGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| 3UTR CAA 72 bp | TCCTGTTCTTGCCTGCCAGGACTGATTGTGGTGACGTaGGCCGTGTGTTGGATGCCCAATCAGATCCGACGG | + |
|
Preference number: 4 (lower is better) Translates to: SCSCLPGLIVVT*AVCWMPNQIRR Trigger: CCGTCGGATCTGATTGGGCATCCAACACACGGCCAACGTCACCACAATCAGTCCTGGCAGGCAAGAACAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTCTACCTCAGCTCTGTGGTCAACCCTCTCCTCTACAACGTGTCCTCTCAGAGTGGTGAGAAGCCCTaGCCTGATGGCCGAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FFYLSSVVNPLLYNVSSQSGEKP*PDGRGR Trigger: TCTGCCTCGGCCATCAGGCCAGGGCTTCTCACCACT...CTGAGAGGACACGTTGTAGAGGAGAGGGTTGACCACAGAGCTGAGGTAGAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| CDS-3UTR TCA 90 bp | TACCTCAGCTCTGTGGTCAACCCTCTCCTCTACAACGTGTCCTCTCAGCAGTTCACCCAGCTGAAGCAATaGGACAGGCTGCTGACGATG | + |
|
Preference number: 4 (lower is better) Translates to: YLSSVVNPLLYNVSSQQFTQLKQ*DRLLTM Trigger: CATCGTCAGCAGCCTGTCTCATTGCTTCAGCTGGGT...GAACTGCTGAGAGGACACGTTGTAGAGGAGAGGGTTGACCACAGAGCTGAGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| CDS-3UTR GCA 90 bp | GAGACCAAACCAGCTGGGTCCACCCCAGAAAATAGTTTACAGGAGCAGGAAGTATGGGCCTCGGCCCATTaGAAAGAGGGGTGTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ETKPAGSTPENSLQEQEVWASAH*KEGCCS Trigger: GCTGCAACACCCCTCTTTGCAATGGGCCGAGGCCCA...TACTTCCTGCTCCTGTAAACTATTTTCTGGGGTGGACCCAGCTGGTTTGGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| CDS-3UTR GCA 90 bp | GCCTTGGCGGTGGTTAACCAGATTGGGATGGGAGGGTCTGGACTTTCTGCTCCACAATCCGCAAAAAGTTaGTGCGATGCCGAGAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALAVVNQIGMGGSGLSAPQSAKS*CDAENP Trigger: TGGGTTCTCGGCATCGCAGCAACTTTTTGCGGATTG...TGGAGCAGAAAGTCCAGACCCTCCCATCCCAATCTGGTTAACCACCGCCAAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| CDS-3UTR TCA 90 bp | AGACTCCCTTGTCTACCCAGAATAAAAGGACACCCAGAAGAGACTCGGGAAGGTGGACTGGTACCCAGCTaGAGCAATGAGACAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLPCLPRIKGHPEETREGGLVPS*SNETGC Trigger: GCAGCCTGTCTCATTGCTTCAGCTGGGTACCAGTCC...ACCTTCCCGAGTCTCTTCTGGGTGTCCTTTTATTCTGGGTAGACAAGGGAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| CDS-3UTR TCA 90 bp | GGCTCTCCCCTCCCGCAAAAGCAAAGTTACCTTCACGCAGCAGCAGTCTCTGAAGATGAACTCAGGGGATaGGCAATCGTTGTTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSPLPQKQSYLHAAAVSEDELRG*AIVVQL Trigger: CAGCTGAACAACGATTGCTCATCCCCTGAGTTCATC...TTCAGAGACTGCTGCTGCGTGAAGGTAACTTTGCTTTTGCGGGAGGGGAGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| CDS-3UTR GCA 90 bp | GGCTCTCCCCTCCCGCAAAAGCAAAGTTACCTTCACGCAGCAGCAGTCTCTGAATCCGCAAAAAGTTGCTaGGATGCCGAGAACCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: GSPLPQKQSYLHAAAVSESAKSC*DAENPH Trigger: ATGTGGGTTCTCGGCATCGCAGCAACTTTTTGCGGA...TTCAGAGACTGCTGCTGCGTGAAGGTAACTTTGCTTTTGCGGGAGGGGAGAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCAGGACCTCCGGAAGAGCAGTCAATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NSGPPEEQSML Trigger: GAGCATTGACTGCTCTTCCGGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| CDS-3UTR TCA 90 bp | CCTTGTCTACCCAGAATAAAAGGACACCCAGAAGAGACTCGGGAAGGTGAGAGAAATGAGACAGGCTGCTaGCGATGCACACGACTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PCLPRIKGHPEETREGERNETGC*RCTRLP Trigger: CGGAAGTCGTGTGCATCGTCAGCAGCCTGTCTCATT...TCTCTCACCTTCCCGAGTCTCTTCTGGGTGTCCTTTTATTCTGGGTAGACAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| CDS-3UTR TCA 90 bp | AGACTCCCTTGTCTACCCAGAATAAAAGGACACCCAGAAGAGACTCGGGAAGGTGGGTGTTGCAGCAGCTaGTGCACACGGAGTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RLPCLPRIKGHPEETREGGCCSS*CTRSSV Trigger: AACTGAACTCCGTGTGCATCAGCTGCTGCAACACCC...ACCTTCCCGAGTCTCTTCTGGGTGTCCTTTTATTCTGGGTAGACAAGGGAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| CDS-3UTR GCA 90 bp | CACGGCAATCTTGCGTTACTTGAAAGGAGGGAACAAAAAGACTCCCTTGTCTACTGGGCCTCGGCCCATTaGAAAGAGGGGTGTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HGNLALLERREQKDSLVYWASAH*KEGCCS Trigger: GCTGCAACACCCCTCTTTGCAATGGGCCGAGGCCCA...GTAGACAAGGGAGTCTTTTTGTTCCCTCCTTTCAAGTAACGCAAGATTGCCGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| CDS-3UTR CCA 90 bp | GGGAACAAAAAGACTCCCTTGTCTACCCAGAATAAAAGGACACCCAGAAGAGACAGTGGTGAGAAGCCCTaGCCTGATGGCCGAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GNKKTPLSTQNKRTPRRDSGEKP*PDGRGR Trigger: TCTGCCTCGGCCATCAGGCCAGGGCTTCTCACCACT...GTCTCTTCTGGGTGTCCTTTTATTCTGGGTAGACAAGGGAGTCTTTTTGTTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| CDS-3UTR CCA 90 bp | TACCTCAGCTCTGTGGTCAACCCTCTCCTCTACAACGTGTCCTCTCAGCAGTTCAAGCAGAGGGCTAAGTaGAAGAACAGGAGAGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YLSSVVNPLLYNVSSQQFKQRAK*KNRRVV Trigger: CACCACTCTCCTGTTCTTCCACTTAGCCCTCTGCTT...GAACTGCTGAGAGGACACGTTGTAGAGGAGAGGGTTGACCACAGAGCTGAGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| CDS-3UTR TCA 90 bp | AAAAAGACTCCCTTGTCTACCCAGAATAAAAGGACACCCAGAAGAGACTCGGGAAATGAGACAGGCTGCTaGCGATGCACACGACTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KKTPLSTQNKRTPRRDSGNETGC*RCTRLP Trigger: CGGAAGTCGTGTGCATCGTCAGCAGCCTGTCTCATT...TCCCGAGTCTCTTCTGGGTGTCCTTTTATTCTGGGTAGACAAGGGAGTCTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGACTCCCTTGTCTACCCAGAATAAAAGGACACCCAGAAGAGACTCGGGAAGGGTGTTGCAGCAGCTaGTGCACACGGAGTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KRLPCLPRIKGHPEETREGCCSS*CTRSSV Trigger: AACTGAACTCCGTGTGCATCAGCTGCTGCAACACCC...TTCCCGAGTCTCTTCTGGGTGTCCTTTTATTCTGGGTAGACAAGGGAGTCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| CDS-3UTR GCA 90 bp | AGTATCCACACTCCAAGACTGGTATTACTGTTAGGTTCATCATATCCACCCAGTTGGGCCTCGGCCCATTaGAAAGAGGGGTGTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SIHTPRLVLLLGSSYPPSWASAH*KEGCCS Trigger: GCTGCAACACCCCTCTTTGCAATGGGCCGAGGCCCA...ACTGGGTGGATATGATGAACCTAACAGTAATACCAGTCTTGGAGTGTGGATACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| CDS-3UTR GCA 90 bp | CAGAATGAATTGGTTCAGAGCTTACAAAAGTATTTGTGCACGGCAATCTTGCGTTGGCCGAGGCAGAGCTaGCTCTCTTCTTGGGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QNELVQSLQKYLCTAILRWPRQS*LSSWAS Trigger: CGAGGCCCAAGAAGAGAGGCAGCTCTGCCTCGGCCA...ACGCAAGATTGCCGTGCACAAATACTTTTGTAAGCTCTGAACCAATTCATTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| CDS-3UTR CCA 90 bp | CAAAAGTATTTGTGCACGGCAATCTTGCGTTACTTGAAAGGAGGGAACAAAAAGAGTGGTGAGAAGCCCTaGCCTGATGGCCGAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QKYLCTAILRYLKGGNKKSGEKP*PDGRGR Trigger: TCTGCCTCGGCCATCAGGCCAGGGCTTCTCACCACT...CTTTTTGTTCCCTCCTTTCAAGTAACGCAAGATTGCCGTGCACAAATACTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| 3UTR CAA 72 bp | AAGTCCCCTGAGCTTGAAGCAGCATTAAATTCTCCTTaGCCAGTGGCAAAAAGAAGCCGACAAGCACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSPELEAALNSP*PVAKRSRQAQS Trigger: GCTCTGTGCTTGTCGGCTTCTTTTTGCCACTGGCAAAGGAGAATTTAATGCTGCTTCAAGCTCAGGGGACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CAA 72 bp | CCTGTCTCTTCAGATACCAGAAGAGGGAATCAGGTCTaGTTACAGATGGTTGTGAGCCACCATGTGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PVSSDTRRGNQV*LQMVVSHHVVA Trigger: AGCAACCACATGGTGGCTCACAACCATCTGTAACAAGACCTGATTCCCTCTTCTGGTATCTGAAGAGACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CAA 72 bp | TTCCGTGAAGAGACTGATTGTTTTGACCTCTCTGGGTaGTCAGAAGAAGAGAGACCCACATGGGAAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FREETDCFDLSG*SEEERPTWEVR Trigger: CCTCACTTCCCATGTGGGTCTCTCTTCTTCTGACAACCCAGAGAGGTCAAAACAATCAGTCTCTTCACGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| CDS-3UTR TCA 90 bp | AGAATGAATTGGTTCAGAGCTTACAAAAGTATTTGTGCACGGCAATCTTGCGTTGGACTGGTACCCAGCTaGAGCAATGAGACAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RMNWFRAYKSICARQSCVGLVPS*SNETGC Trigger: GCAGCCTGTCTCATTGCTTCAGCTGGGTACCAGTCC...AACGCAAGATTGCCGTGCACAAATACTTTTGTAAGCTCTGAACCAATTCATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| 3UTR CAA 72 bp | CGGAGCCCACCAATCTGTCCAGTCTTACTAACCTTGTaGCTCCAGAAATCTTTAGTATCCACACTCCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RSPPICPVLLTL*LQKSLVSTLQD Trigger: GTCTTGGAGTGTGGATACTAAAGATTTCTGGAGCAACAAGGTTAGTAAGACTGGACAGATTGGTGGGCTCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CAA 72 bp | AGCTTTCTCCTTTGTTCCGTGAAGAGACTGATTGTTTaGACCTCTCTGGGTTGTCAGAAGAAGAGAGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFLLCSVKRLIV*TSLGCQKKRDP Trigger: TGGGTCTCTCTTCTTCTGACAACCCAGAGAGGTCAAAACAATCAGTCTCTTCACGGAACAAAGGAGAAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| CDS-3UTR TCA 90 bp | ATTCAGAATGAATTGGTTCAGAGCTTACAAAAGTATTTGTGCACGGCAATCTTGAATGAGACAGGCTGCTaGCGATGCACACGACTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: IQNELVQSLQKYLCTAILNETGC*RCTRLP Trigger: CGGAAGTCGTGTGCATCGTCAGCAGCCTGTCTCATT...CAAGATTGCCGTGCACAAATACTTTTGTAAGCTCTGAACCAATTCATTCTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| CDS-3UTR TCA 90 bp | CTACACACAGAAATTCAGAATGAATTGGTTCAGAGCTTACAAAAGTATTTGTGCAATGAGACAGGCTGCTaGCGATGCACACGACTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LHTEIQNELVQSLQKYLCNETGC*RCTRLP Trigger: CGGAAGTCGTGTGCATCGTCAGCAGCCTGTCTCATT...GCACAAATACTTTTGTAAGCTCTGAACCAATTCATTCTGAATTTCTGTGTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| 3UTR CAA 72 bp | TGTATCACATGTTTGGGAGATAGGCAGCTTTCTCCTTaGTTCCGTGAAGAGACTGATTGTTTTGACCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CITCLGDRQLSP*FREETDCFDLS Trigger: AGAGAGGTCAAAACAATCAGTCTCTTCACGGAACAAAGGAGAAAGCTGCCTATCTCCCAAACATGTGATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CAA 72 bp | TTACAAAAGTATTTGTGCACGGCAATCTTGCGTTACTaGAAAGGAGGGAACAAAAAGACTCCCTTGTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: LQKYLCTAILRY*KGGNKKTPLST Trigger: GGTAGACAAGGGAGTCTTTTTGTTCCCTCCTTTCAAGTAACGCAAGATTGCCGTGCACAAATACTTTTGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| 3UTR CAA 72 bp | ATTCAGAATGAATTGGTTCAGAGCTTACAAAAGTATTaGTGCACGGCAATCTTGCGTTACTTGAAAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IQNELVQSLQKY*CTAILRYLKGG Trigger: CCCTCCTTTCAAGTAACGCAAGATTGCCGTGCACAAATACTTTTGTAAGCTCTGAACCAATTCATTCTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| 3UTR CAA 72 bp | TGCTTATTATTGCGGAGTTCTCATTTTGTTCCCTATTaGCTGCCACTCATTCAAATGGTCTCCCATTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: CLLLRSSHFVPY*LPLIQMVSHLL Trigger: TAACAAATGGGAGACCATTTGAATGAGTGGCAGCAAATAGGGAACAAAATGAGAACTCCGCAATAATAAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| 3UTR CAA 72 bp | CCCTATTTGCTGCCACTCATTCAAATGGTCTCCCATTaGTTATTCAATCTCAATCTTACAGTCAGGATTTTA | + |
|
Preference number: 4 (lower is better) Translates to: PYLLPLIQMVSH*LFNLNLTVRIL Trigger: TAAAATCCTGACTGTAAGATTGAGATTGAATAACAAATGGGAGACCATTTGAATGAGTGGCAGCAAATAGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| CDS-3UTR CAA 90 bp | GGTGAGAGACGAAGGGCCAGACAGGTGAGGCAGCAGGGGTTGGCATCTCCTTTACATGATCCCAGCACTTaGCTCCATCACTTCTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GERRRARQVRQQGLASPLHDPST*LHHFFL Trigger: CAGAAAGAAGTGATGGAGCAAAGTGCTGGGATCATG...TAAAGGAGATGCCAACCCCTGCTGCCTCACCTGTCTGGCCCTTCGTCTCTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| CDS-3UTR CAA 90 bp | TTCAGAAGCCTTGAGCCGAAACTGGCTCTCCCCTCCCGCAAAAGCAAAGTTACCACAATCCGCAAAAAGTaGCTGCGATGCCGAGAACCC | + |
|
Preference number: 5 (lower is better) Translates to: FRSLEPKLALPSRKSKVTTIRKK*LRCREP Trigger: GGGTTCTCGGCATCGCAGCAACTTTTTGCGGATTGT...GGTAACTTTGCTTTTGCGGGAGGGGAGAGCCAGTTTCGGCTCAAGGCTTCTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| CDS-3UTR CAA 90 bp | AAAAAGACTCCCTTGTCTACCCAGAATAAAAGGACACCCAGAAGAGACTCGGGATTGGGCCTCGGCCCATaGCAAAGAGGGGTGTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KKTPLSTQNKRTPRRDSGLGLGP*QRGVLQ Trigger: CTGCAACACCCCTCTTTGCAATGGGCCGAGGCCCAA...TCCCGAGTCTCTTCTGGGTGTCCTTTTATTCTGGGTAGACAAGGGAGTCTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| CDS-3UTR CAA 90 bp | CAGATCCGACGGATCATGGCTGCAGCAAAACCCAAACATGACTGGACCAGAACGCATGATCCCAGCACTTaGCTCCATCACTTCTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QIRRIMAAAKPKHDWTRTHDPST*LHHFFL Trigger: CAGAAAGAAGTGATGGAGCAAAGTGCTGGGATCATG...CGTTCTGGTCCAGTCATGTTTGGGTTTTGCTGCAGCCATGATCCGTCGGATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000162899.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCATTGGTGGCGCCTGTAGGCCCAGCATTCCATTTTCCTAGATTTCCTAAGGGGGATGAGCAATCGTaGTTCAGCTGGAATTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LPLVAPVGPAFHFPRFPKGDEQS*FSWNSS Trigger: TGAAGAATTCCAGCTGAACAACGATTGCTCATCCCC...CTTAGGAAATCTAGGAAAATGGAATGCTGGGCCTACAGGCGCCACCAATGGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| CDS TCA 90 bp | CATGTCTTGAACGTTCACGGTGCAATTTACGATGAACTCAGGGGATaGGCAATCGTTGTTCAGCTGGAATTCTTCACACTGGTAGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: HVLNVHGAIYDELRG*AIVVQLEFFTLVAL Trigger: CAGTGCTACCAGTGTGAAGAATTCCAGCTGAACAACGATTGCTCATCCCCTGAGTTCATCGTAAATTGCACCGTGAACGTTCAAGACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| CDS-3UTR CAA 90 bp | AGAATGAATTGGTTCAGAGCTTACAAAAGTATTTGTGCACGGCAATCTTGCGTTCTGGTAGCACTGAATTaGCAGCGCCAGCCCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RMNWFRAYKSICARQSCVLVALN*QRQPWK Trigger: CTTCCAGGGCTGGCGCTGCAAATTCAGTGCTACCAG...AACGCAAGATTGCCGTGCACAAATACTTTTGTAAGCTCTGAACCAATTCATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| CDS TCA 90 bp | CTTCTTTCTGACACATGTCTTGAACGTTCACGGTGCAATTTACGATaGACTCAGGGGATGAGCAATCGTTGTTCAGCTGGAATTCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LLSDTCLERSRCNLR*TQGMSNRCSAGILH Trigger: GTGAAGAATTCCAGCTGAACAACGATTGCTCATCCCCTGAGTTCATCGTAAATTGCACCGTGAACGTTCAAGACATGTGTCAGAAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| CDS-3UTR CAA 90 bp | CAGAATGAATTGGTTCAGAGCTTACAAAAGTATTTGTGCACGGCAATCTTGCGTCATGATCCCAGCACTTaGCTCCATCACTTCTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QNELVQSLQKYLCTAILRHDPST*LHHFFL Trigger: CAGAAAGAAGTGATGGAGCAAAGTGCTGGGATCATG...ACGCAAGATTGCCGTGCACAAATACTTTTGTAAGCTCTGAACCAATTCATTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| CDS-3UTR CAA 90 bp | ACAAAAGTATTTGTGCACGGCAATCTTGCGTTACTTGAAAGGAGGGAACAAAAACATGATCCCAGCACTTaGCTCCATCACTTCTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TKVFVHGNLALLERREQKHDPST*LHHFFL Trigger: CAGAAAGAAGTGATGGAGCAAAGTGCTGGGATCATG...TTTTTGTTCCCTCCTTTCAAGTAACGCAAGATTGCCGTGCACAAATACTTTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| CDS-3UTR CAA 90 bp | GGAGTTCTCATTTTGTTCCCTATTTGCTGCCACTCATTCAAATGGTCTCCCATTTTTCTGACACATGTCTaGAACGTTCACGGTGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: GVLILFPICCHSFKWSPIFLTHV*NVHGAI Trigger: AATTGCACCGTGAACGTTCAAGACATGTGTCAGAAA...AATGGGAGACCATTTGAATGAGTGGCAGCAAATAGGGAACAAAATGAGAACTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| CDS CAA 72 bp | CCTGGCCTGATGGCCGAGGCAGAGCTGCCTCTCTTCTaGGGCCTCGGCCCATTGCAAAGAGGGGTGTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PGLMAEAELPLF*GLGPLQRGVLQ Trigger: CTGCAACACCCCTCTTTGCAATGGGCCGAGGCCCAAGAAGAGAGGCAGCTCTGCCTCGGCCATCAGGCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| CDS CAA 90 bp | GTGAGAAGCCCTGGCCTGATGGCCGAGGCAGAGCTGCCTCTCTTCTaGGGCCTCGGCCCATTGCAAAGAGGGGTGTTGCAGCAGCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: VRSPGLMAEAELPLF*GLGPLQRGVLQQLM Trigger: CATCAGCTGCTGCAACACCCCTCTTTGCAATGGGCCGAGGCCCAAGAAGAGAGGCAGCTCTGCCTCGGCCATCAGGCCAGGGCTTCTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| CDS CAA 72 bp | GAGGCAGAGCTGCCTCTCTTCTTGGGCCTCGGCCCATaGCAAAGAGGGGTGTTGCAGCAGCTGATGCACACG | + |
|
Preference number: 6 (lower is better) Translates to: EAELPLFLGLGP*QRGVLQQLMHT Trigger: CGTGTGCATCAGCTGCTGCAACACCCCTCTTTGCAATGGGCCGAGGCCCAAGAAGAGAGGCAGCTCTGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| CDS CAA 90 bp | CTGATGGCCGAGGCAGAGCTGCCTCTCTTCTTGGGCCTCGGCCCATaGCAAAGAGGGGTGTTGCAGCAGCTGATGCACACGGAGTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LMAEAELPLFLGLGP*QRGVLQQLMHTEFS Trigger: ACTGAACTCCGTGTGCATCAGCTGCTGCAACACCCCTCTTTGCAATGGGCCGAGGCCCAAGAAGAGAGGCAGCTCTGCCTCGGCCATCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| CDS CAA 90 bp | GAGCTGCCTCTCTTCTTGGGCCTCGGCCCATTGCAAAGAGGGGTGTaGCAGCAGCTGATGCACACGGAGTTCAGTTTCCCAGGGGAACAG | + |
|
Preference number: 6 (lower is better) Translates to: ELPLFLGLGPLQRGV*QQLMHTEFSFPGEQ Trigger: CTGTTCCCCTGGGAAACTGAACTCCGTGTGCATCAGCTGCTGCAACACCCCTCTTTGCAATGGGCCGAGGCCCAAGAAGAGAGGCAGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| CDS TCA 72 bp | CAGGGGAACAGAAGGACTGGTACCCAGCTGAAGCAATaGGACAGGCTGCTGACGATGCACACGACTTCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: QGNRRTGTQLKQ*DRLLTMHTTSG Trigger: ACCGGAAGTCGTGTGCATCGTCAGCAGCCTGTCTCATTGCTTCAGCTGGGTACCAGTCCTTCTGTTCCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| CDS CAA 72 bp | CTCTTCTTGGGCCTCGGCCCATTGCAAAGAGGGGTGTaGCAGCAGCTGATGCACACGGAGTTCAGTTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LFLGLGPLQRGV*QQLMHTEFSFP Trigger: TGGGAAACTGAACTCCGTGTGCATCAGCTGCTGCAACACCCCTCTTTGCAATGGGCCGAGGCCCAAGAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000162899.8 |
||
| CDS TCA 72 bp | GACAGGCTGCTGACGATGCACACGACTTCCGGTACATaGTCCCAGCACTTTGCTCCATCACTTCTTTCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: DRLLTMHTTSGT*SQHFAPSLLSD Trigger: GTCAGAAAGAAGTGATGGAGCAAAGTGCTGGGATCATGTACCGGAAGTCGTGTGCATCGTCAGCAGCCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027582.10 ENSMUST00000159417.2 ENSMUST00000159529.2 ENSMUST00000161361.3 ENSMUST00000162899.8 |
||
| CDS TCA 72 bp | GACACATGTCTTGAACGTTCACGGTGCAATTTACGATaGACTCAGGGGATGAGCAATCGTTGTTCAGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: DTCLERSRCNLR*TQGMSNRCSAG Trigger: TCCAGCTGAACAACGATTGCTCATCCCCTGAGTTCATCGTAAATTGCACCGTGAACGTTCAAGACATGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||
| CDS TCA 72 bp | AACGTTCACGGTGCAATTTACGATGAACTCAGGGGATaGGCAATCGTTGTTCAGCTGGAATTCTTCACACTG | + |
|
Preference number: 6 (lower is better) Translates to: NVHGAIYDELRG*AIVVQLEFFTL Trigger: CAGTGTGAAGAATTCCAGCTGAACAACGATTGCTCATCCCCTGAGTTCATCGTAAATTGCACCGTGAACGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159417.2 |
||