Pregenerated sensors for LYNX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022594Ensembl transcript IDs: ENSMUST00000023259.15
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCACCCACTGAGTCAGGGACCCGCCTCTGACCCTCCTTGCCAGTaGCCTATGGCGTCCACAGGTCAGTCTCAATGCTTGCTGCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: PHPLSQGPASDPPCQ*PMASTGQSQCLLLL Trigger: CAGCAGCAGCAAGCATTGAGACTGACCTGTGGACGCCATAGGGCACTGGCAAGGAGGGTCAGAGGCGGGTCCCTGACTCAGTGGGTGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR CCA 90 bp | GCTGGTGGTGTGCATGTTCCATGTGAGCTCAGGTGGGGGCAGCATTaGCTTCCTCCTAGCATCTTGCCTGGGCCTCAGGGGACACCACAG | + |
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Preference number: 1 (lower is better) Translates to: AGGVHVPCELRWGQH*LPPSILPGPQGTPQ Trigger: CTGTGGTGTCCCCTGAGGCCCAGGCAAGATGCTAGGAGGAAGCCAATGCTGCCCCCACCTGAGCTCACATGGAACATGCACACCACCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR GCA 90 bp | CTCCTAGCATCTTGCCTGGGCCTCAGGGGACACCACAGCCAGTGCTaGCTTTTGGGCTCTGTAGCCTGCACTGAGTGCACATGTGCATGC | + |
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Preference number: 1 (lower is better) Translates to: LLASCLGLRGHHSQC*LLGSVACTECTCAC Trigger: GCATGCACATGTGCACTCAGTGCAGGCTACAGAGCCCAAAAGGCAGCACTGGCTGTGGTGTCCCCTGAGGCCCAGGCAAGATGCTAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR CCA 90 bp | GTGGAGGTCAAGGGGCCTGCTGAGCTGGGGCTGGAGGGATTTCAGTaGCCTATGGAAATGACGCCGTTGCTAGGAACCCTTGGCCAATGG | + |
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Preference number: 1 (lower is better) Translates to: VEVKGPAELGLEGFQ*PMEMTPLLGTLGQW Trigger: CCATTGGCCAAGGGTTCCTAGCAACGGCGTCATTTCCATAGGCCACTGAAATCCCTCCAGCCCCAGCTCAGCAGGCCCCTTGACCTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR CCA 90 bp | CTTGCTGCTGCTGCTGGTGGTGTGCATGTTCCATGTGAGCTCAGGTaGGGGCAGCATTGGCTTCCTCCTAGCATCTTGCCTGGGCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: LAAAAGGVHVPCELR*GQHWLPPSILPGPQ Trigger: CTGAGGCCCAGGCAAGATGCTAGGAGGAAGCCAATGCTGCCCCCACCTGAGCTCACATGGAACATGCACACCACCAGCAGCAGCAGCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR GCA 90 bp | TTCCTCCTAGCATCTTGCCTGGGCCTCAGGGGACACCACAGCCAGTaGTGCCTTTTGGGCTCTGTAGCCTGCACTGAGTGCACATGTGCA | + |
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Preference number: 1 (lower is better) Translates to: FLLASCLGLRGHHSQ*CLLGSVACTECTCA Trigger: TGCACATGTGCACTCAGTGCAGGCTACAGAGCCCAAAAGGCAGCACTGGCTGTGGTGTCCCCTGAGGCCCAGGCAAGATGCTAGGAGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR TCA 90 bp | CTCCAAGAGCCAGCTGAGAGGGTACTGGCACTGTCATTTCACCAATaGGATGGCTTGAGGAGCCCAGGTCACTCAGTGCTGCGGGATGCC | + |
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Preference number: 1 (lower is better) Translates to: LQEPAERVLALSFHQ*DGLRSPGHSVLRDA Trigger: GGCATCCCGCAGCACTGAGTGACCTGGGCTCCTCAAGCCATCTCATTGGTGAAATGACAGTGCCAGTACCCTCTCAGCTGGCTCTTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR GCA 90 bp | GACCCTCCTTGCCAGTGCCCTATGGCGTCCACAGGTCAGTCTCAATaGTTGCTGCTGCTGCTGGTGGTGTGCATGTTCCATGTGAGCTCA | + |
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Preference number: 1 (lower is better) Translates to: DPPCQCPMASTGQSQ*LLLLLVVCMFHVSS Trigger: TGAGCTCACATGGAACATGCACACCACCAGCAGCAGCAGCAAGCATTGAGACTGACCTGTGGACGCCATAGGGCACTGGCAAGGAGGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR GCA 90 bp | CTAGACACAGATGAAAGAAGCTGGCCCCCAGCTCTGCAGTACCGGTaGTTCTCCAAGGGCAATCAAGCCTCCTCCACACCACCCCCTTGT | + |
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Preference number: 1 (lower is better) Translates to: LDTDERSWPPALQYR*FSKGNQASSTPPPC Trigger: ACAAGGGGGTGGTGTGGAGGAGGCTTGATTGCCCTTGGAGAAGCACCGGTACTGCAGAGCTGGGGGCCAGCTTCTTTCATCTGTGTCTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR TCA 90 bp | TTCCTCACATGGCTTCCACATCACATTTGCTCTGGCAAGCCGCGCTaGTCTTCGGAGACAGCCCTGCTGAGTCTTTCTCTGCTTCTAGCC | + |
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Preference number: 1 (lower is better) Translates to: FLTWLPHHICSGKPR*SSETALLSLSLLLA Trigger: GGCTAGAAGCAGAGAAAGACTCAGCAGGGCTGTCTCCGAAGATCAGCGCGGCTTGCCAGAGCAAATGTGATGTGGAAGCCATGTGAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR GCA 90 bp | AGGCGGAAAACCACATCAGCTCTAGCAGCAGACAGAGTTCAGGTCTaGCTAGAACCAGGAAGAAGGTCCCCAGGATGGACCTTTGTGTCC | + |
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Preference number: 1 (lower is better) Translates to: RRKTTSALAADRVQV*LEPGRRSPGWTFVS Trigger: GGACACAAAGGTCCATCCTGGGGACCTTCTTCCTGGTTCTAGGCAGACCTGAACTCTGTCTGCTGCTAGAGCTGATGTGGTTTTCCGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR GCA 90 bp | CCTCATACACTTTTGCAGAACTGTTGTGGAGTGTGTAGAGCCACCTaGAGTGGGCTAGACAGATGCTCATCACACCACCCCAGACAGGGT | + |
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Preference number: 1 (lower is better) Translates to: PHTLLQNCCGVCRAT*SGLDRCSSHHPRQG Trigger: ACCCTGTCTGGGGTGGTGTGATGAGCATCTGTCTAGCCCACTGCAGGTGGCTCTACACACTCCACAACAGTTCTGCAAAAGTGTATGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR TCA 90 bp | GGGAGGGAGATGTGTCATAAAAGTGGATTTCATTTCCTTGCTGGGTaGGAGCCTGGGGTTGGCAGAGACACAACCAAGGGAAGTGCTAGG | + |
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Preference number: 1 (lower is better) Translates to: GREMCHKSGFHFLAG*EPGVGRDTTKGSAR Trigger: CCTAGCACTTCCCTTGGTTGTGTCTCTGCCAACCCCAGGCTCTCACCCAGCAAGGAAATGAAATCCACTTTTATGACACATCTCCCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR TCA 90 bp | AAGCACACACATTTGGTGCTGTCCCATCAAGCGGCCTCTCTCCAGTaGCTACCAAGAGGCTTCCAGATTGCAACTCTAGATAACCACTGC | + |
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Preference number: 1 (lower is better) Translates to: KHTHLVLSHQAASLQ*LPRGFQIATLDNHC Trigger: GCAGTGGTTATCTAGAGTTGCAATCTGGAAGCCTCTTGGTAGTCACTGGAGAGAGGCCGCTTGATGGGACAGCACCAAATGTGTGTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR TCA 90 bp | GGCCCAGCCTCAAAGAACCCCAGCTATTGGAGTAGTACCCATAGTTaGATGTGTTGGTCCTGGAAAGTTGAATGGCCCAGGAAAATGAAG | + |
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Preference number: 1 (lower is better) Translates to: GPASKNPSYWSSTHS*MCWSWKVEWPRKMK Trigger: CTTCATTTTCCTGGGCCATTCAACTTTCCAGGACCAACACATTCAACTATGGGTACTACTCCAATAGCTGGGGTTCTTTGAGGCTGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR TCA 90 bp | CTATCCCAACATCAGGTCTGGCAGAGTTCCTCAGATAAGTGGAAATaGCAAAGGGCTTCCTCACATGGCTTCCACATCACATTTGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: LSQHQVWQSSSDKWK*QRASSHGFHITFAL Trigger: CAGAGCAAATGTGATGTGGAAGCCATGTGAGGAAGCCCTTTGTCATTTCCACTTATCTGAGGAACTCTGCCAGACCTGATGTTGGGATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR GCA 90 bp | CTTCCTCCTAGCATCTTGCCTGGGCCTCAGGGGACACCACAGCCAGTGCTGCCTAGGAGAAGCCCAGCCTaGCCCACCCATGGGTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: LPPSILPGPQGTPQPVLPRRSPA*PTHGWA Trigger: TGCCCACCCATGGGTGGGGCAGGCTGGGCTTCTCCT...AGGCAGCACTGGCTGTGGTGTCCCCTGAGGCCCAGGCAAGATGCTAGGAGGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR TCA 90 bp | CTTCCTCCTAGCATCTTGCCTGGGCCTCAGGGGACACCACAGCCAGTGCTGCCTCCCGGAGGAGGAAACTaGGGCGGAAAACCACATCAG | + |
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Preference number: 2 (lower is better) Translates to: LPPSILPGPQGTPQPVLPPGGGN*GGKPHQ Trigger: CTGATGTGGTTTTCCGCCTCAGTTTCCTCCTCCGGG...AGGCAGCACTGGCTGTGGTGTCCCCTGAGGCCCAGGCAAGATGCTAGGAGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR CCA 90 bp | GGAAGAAGGTCCCCAGGATGGACCTTTGTGTCCCGAGCTCTCACCACTGGGAGGAGGGGCCTGCTGAGCTaGGGCTGGAGGGATTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: GRRSPGWTFVSRALTTGRRGLLS*GWRDFS Trigger: ACTGAAATCCCTCCAGCCCCAGCTCAGCAGGCCCCT...CCTCCCAGTGGTGAGAGCTCGGGACACAAAGGTCCATCCTGGGGACCTTCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR GCA 90 bp | TTGCTGCTGCTGCTGGTGGTGTGCATGTTCCATGTGAGCTCAGGTGGGGGCAGCCTGCTCCCAAGTCCCTaGCAACTTCAAGGCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: LLLLLVVCMFHVSSGGGSLLPSP*QLQGPA Trigger: TGCTGGGCCTTGAAGTTGGCAGGGACTTGGGAGCAG...GCTGCCCCCACCTGAGCTCACATGGAACATGCACACCACCAGCAGCAGCAGCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR CCA 90 bp | CATTGGCTTCCTCCTAGCATCTTGCCTGGGCCTCAGGGGACACCACAGCCAGTGGGTAGTCCCACTCCATaGACATTGGCCAGCATCCCG | + |
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Preference number: 2 (lower is better) Translates to: HWLPPSILPGPQGTPQPVGSPTP*TLASIP Trigger: CGGGATGCTGGCCAATGTCCATGGAGTGGGACTACC...CACTGGCTGTGGTGTCCCCTGAGGCCCAGGCAAGATGCTAGGAGGAAGCCAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR CCA 90 bp | TTGCTGCTGCTGCTGGTGGTGTGCATGTTCCATGTGAGCTCAGGTGGGGGCAGCAGAAGGTCCCCAGGATaGACCTTTGTGTCCCGAGCT | + |
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Preference number: 2 (lower is better) Translates to: LLLLLVVCMFHVSSGGGSRRSPG*TFVSRA Trigger: AGCTCGGGACACAAAGGTCCATCCTGGGGACCTTCT...GCTGCCCCCACCTGAGCTCACATGGAACATGCACACCACCAGCAGCAGCAGCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR CAA 90 bp | CCTCCTTGCCAGTGCCCTATGGCGTCCACAGGTCAGTCTCAATGCTaGCTGCTGCTGCTGGTGGTGTGCATGTTCCATGTGAGCTCAGGT | + |
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Preference number: 2 (lower is better) Translates to: PPCQCPMASTGQSQC*LLLLVVCMFHVSSG Trigger: ACCTGAGCTCACATGGAACATGCACACCACCAGCAGCAGCAGCAAGCATTGAGACTGACCTGTGGACGCCATAGGGCACTGGCAAGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR TCA 90 bp | TTGCTGCTGCTGCTGGTGGTGTGCATGTTCCATGTGAGCTCAGGTGGGGGCAGCGGACCTCGTGGTAGTTaGGGAGTGTCAGAAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: LLLLLVVCMFHVSSGGGSGPRGS*GVSEGR Trigger: TCTTCCTTCTGACACTCCTCAACTACCACGAGGTCC...GCTGCCCCCACCTGAGCTCACATGGAACATGCACACCACCAGCAGCAGCAGCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR CCA 90 bp | GTGGCAGTGTTGCCACTGTGGGGCCTATCTGGTCGGTGTCTAGACACAGATGAAAGCCTGCCCCACCCATaGGTGGGCACATTACAGGTC | + |
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Preference number: 2 (lower is better) Translates to: VAVLPLWGLSGRCLDTDESLPHP*VGTLQV Trigger: GACCTGTAATGTGCCCACCCATGGGTGGGGCAGGCT...TTCATCTGTGTCTAGACACCGACCAGATAGGCCCCACAGTGGCAACACTGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR CCA 90 bp | GGAAGAAGGTCCCCAGGATGGACCTTTGTGTCCCGAGCTCTCACCACTGGGAGGCTGGAGGGATTTCAGTaGCCTATGGAAATGACGCCG | + |
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Preference number: 2 (lower is better) Translates to: GRRSPGWTFVSRALTTGRLEGFQ*PMEMTP Trigger: CGGCGTCATTTCCATAGGCCACTGAAATCCCTCCAG...CCTCCCAGTGGTGAGAGCTCGGGACACAAAGGTCCATCCTGGGGACCTTCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR CCA 90 bp | CATTGGCTTCCTCCTAGCATCTTGCCTGGGCCTCAGGGGACACCACAGCCAGTGTCAAGGCCCAGCAGCTaGTGTGTGAATGAAGGACTG | + |
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Preference number: 2 (lower is better) Translates to: HWLPPSILPGPQGTPQPVSRPSS*CVNEGL Trigger: CAGTCCTTCATTCACACACCAGCTGCTGGGCCTTGA...CACTGGCTGTGGTGTCCCCTGAGGCCCAGGCAAGATGCTAGGAGGAAGCCAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR GCA 90 bp | GTGGCAGTGTTGCCACTGTGGGGCCTATCTGGTCGGTGTCTAGACACAGATGAAGAGTGCACATGTGCATaGGCGCTCCCCCTCCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: VAVLPLWGLSGRCLDTDEECTCA*ALPLPF Trigger: AAAAGGGAGGGGGAGCGCGCATGCACATGTGCACTC...TTCATCTGTGTCTAGACACCGACCAGATAGGCCCCACAGTGGCAACACTGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR GCA 90 bp | CAGGCCTCCAAGAGCCAGCTGAGAGGGTACTGGCACTGTCATTTCACCAATGAGTTCCTCCTAGCATCTTaGCTGGGCCTCAGGGGACAC | + |
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Preference number: 2 (lower is better) Translates to: QASKSQLRGYWHCHFTNEFLLAS*LGLRGH Trigger: GTGTCCCCTGAGGCCCAGGCAAGATGCTAGGAGGAA...CTCATTGGTGAAATGACAGTGCCAGTACCCTCTCAGCTGGCTCTTGGAGGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR CCA 90 bp | CAGGCCTCCAAGAGCCAGCTGAGAGGGTACTGGCACTGTCATTTCACCAATGAGCTGCTGAGCTGGGGCTaGAGGGATTTCAGTGGCCTA | + |
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Preference number: 2 (lower is better) Translates to: QASKSQLRGYWHCHFTNELLSWG*RDFSGL Trigger: TAGGCCACTGAAATCCCTCCAGCCCCAGCTCAGCAG...CTCATTGGTGAAATGACAGTGCCAGTACCCTCTCAGCTGGCTCTTGGAGGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR CCA 90 bp | AGGCACAGGGCTTCTTGTAGGGCTGTGTGGCAGTGTTGCCACTGTGGGGCCTATACAGATGAAAGAAGCTaGCCCCCAGCTCTGCAGTAC | + |
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Preference number: 2 (lower is better) Translates to: RHRASCRAVWQCCHCGAYTDERS*PPALQY Trigger: GTACTGCAGAGCTGGGGGCCAGCTTCTTTCATCTGT...ATAGGCCCCACAGTGGCAACACTGCCACACAGCCCTACAAGAAGCCCTGTGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR GCA 90 bp | CAGGCCTCCAAGAGCCAGCTGAGAGGGTACTGGCACTGTCATTTCACCAATGAGATAGCATGGGTCACCTaGTCCCAAGTCCCTGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: QASKSQLRGYWHCHFTNEIAWVT*SQVPAN Trigger: GTTGGCAGGGACTTGGGAGCAGGTGACCCATGCTAT...CTCATTGGTGAAATGACAGTGCCAGTACCCTCTCAGCTGGCTCTTGGAGGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR GCA 90 bp | GTGGCAGTGTTGCCACTGTGGGGCCTATCTGGTCGGTGTCTAGACACAGATGAAGGACACCACAGCCAGTaGTGCCTTTTGGGCTCTGTA | + |
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Preference number: 2 (lower is better) Translates to: VAVLPLWGLSGRCLDTDEGHHSQ*CLLGSV Trigger: TACAGAGCCCAAAAGGCAGCACTGGCTGTGGTGTCC...TTCATCTGTGTCTAGACACCGACCAGATAGGCCCCACAGTGGCAACACTGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR CCA 90 bp | AGAAGCCCAGCCTGCCCCACCCATGGGTGGGCACATTACAGGTCCACATGTCAGTTGGGTGGAGTGAATTaGGAGAGAGAGGGAAACTGT | + |
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Preference number: 2 (lower is better) Translates to: RSPACPTHGWAHYRSTCQLGGVN*EREGNC Trigger: ACAGTTTCCCTCTCTCTCCCAATTCACTCCACCCAA...CTGACATGTGGACCTGTAATGTGCCCACCCATGGGTGGGGCAGGCTGGGCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR CCA 90 bp | CAGGCCTCCAAGAGCCAGCTGAGAGGGTACTGGCACTGTCATTTCACCAATGAGGCTTGCTGCTGCTGCTaGTGGTGTGCATGTTCCATG | + |
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Preference number: 2 (lower is better) Translates to: QASKSQLRGYWHCHFTNEACCCC*WCACSM Trigger: CATGGAACATGCACACCACCAGCAGCAGCAGCAAGC...CTCATTGGTGAAATGACAGTGCCAGTACCCTCTCAGCTGGCTCTTGGAGGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR TCA 90 bp | CTTCCTCCTAGCATCTTGCCTGGGCCTCAGGGGACACCACAGCCAGTGCTGCCTTTCCTCAGTGACATGTaGGTTGAGGTACTAGTTAGA | + |
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Preference number: 2 (lower is better) Translates to: LPPSILPGPQGTPQPVLPFLSDM*VEVLVR Trigger: TCTAACTAGTACCTCAACTCACATGTCACTGAGGAA...AGGCAGCACTGGCTGTGGTGTCCCCTGAGGCCCAGGCAAGATGCTAGGAGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR GCA 90 bp | CAGGCCTCCAAGAGCCAGCTGAGAGGGTACTGGCACTGTCATTTCACCAATGAGGACTCATCTTCCCTCTaGCCAGTCAGTGTCTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: QASKSQLRGYWHCHFTNEDSSSL*PVSVSS Trigger: TGAGGAGACACTGACTGGGCAGAGGGAAGATGAGTC...CTCATTGGTGAAATGACAGTGCCAGTACCCTCTCAGCTGGCTCTTGGAGGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR GCA 90 bp | CAGGCCTCCAAGAGCCAGCTGAGAGGGTACTGGCACTGTCATTTCACCAATGAGAATGCTTGCTGCTGCTaGTGGTGGTGTGCATGTTCC | + |
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Preference number: 2 (lower is better) Translates to: QASKSQLRGYWHCHFTNENACCC*WWCACS Trigger: GGAACATGCACACCACCAGCAGCAGCAGCAAGCATT...CTCATTGGTGAAATGACAGTGCCAGTACCCTCTCAGCTGGCTCTTGGAGGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR CCA 90 bp | GTGGCAGTGTTGCCACTGTGGGGCCTATCTGGTCGGTGTCTAGACACAGATGAAAGTGTTGCGTTTGAGTaGATCTGGCTTGGGGAACCG | + |
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Preference number: 2 (lower is better) Translates to: VAVLPLWGLSGRCLDTDESVAFE*IWLGEP Trigger: CGGTTCCCCAAGCCAGATCCACTCAAACGCAACACT...TTCATCTGTGTCTAGACACCGACCAGATAGGCCCCACAGTGGCAACACTGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR TCA 90 bp | CTGAGGCGGAAAACCACATCAGCTCTAGCAGCAGACAGAGTTCAGGTCTGCCTAACTGAGGCAGGGTTCTaGAGGTGGAGTTTGGCTACT | + |
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Preference number: 2 (lower is better) Translates to: LRRKTTSALAADRVQVCLTEAGF*RWSLAT Trigger: AGTAGCCAAACTCCACCTTCAGAACCCTGCCTCAGT...TAGGCAGACCTGAACTCTGTCTGCTGCTAGAGCTGATGTGGTTTTCCGCCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR GCA 90 bp | GTGGCAGTGTTGCCACTGTGGGGCCTATCTGGTCGGTGTCTAGACACAGATGAACGTCTGATCCCTTCTTaGCATGCCCAGAATAACAGG | + |
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Preference number: 2 (lower is better) Translates to: VAVLPLWGLSGRCLDTDERLIPS*HAQNNR Trigger: CCTGTTATTCTGGGCATGGCAAGAAGGGATCAGACG...TTCATCTGTGTCTAGACACCGACCAGATAGGCCCCACAGTGGCAACACTGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR CCA 90 bp | CAGGCCTCCAAGAGCCAGCTGAGAGGGTACTGGCACTGTCATTTCACCAATGAGGTTGCTAGGAACCCTTaGCCAATGGCTATCCCAACA | + |
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Preference number: 2 (lower is better) Translates to: QASKSQLRGYWHCHFTNEVARNP*PMAIPT Trigger: TGTTGGGATAGCCATTGGCCAAGGGTTCCTAGCAAC...CTCATTGGTGAAATGACAGTGCCAGTACCCTCTCAGCTGGCTCTTGGAGGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR CCA 90 bp | CTTCCTCCTAGCATCTTGCCTGGGCCTCAGGGGACACCACAGCCAGTGCTGCCTTCACCACTGGGAGGTTaGAATAAAACATTTGTGATG | + |
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Preference number: 2 (lower is better) Translates to: LPPSILPGPQGTPQPVLPSPLGG*NKTFVM Trigger: CATCACAAATGTTTTATTCCAACCTCCCAGTGGTGA...AGGCAGCACTGGCTGTGGTGTCCCCTGAGGCCCAGGCAAGATGCTAGGAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR TCA 90 bp | TTAGAGAGCATGGTAAGGCTCCCAAGGACAGCTACACTGCATGAAAGGCAGATCTGGGAAGCCACTGGCTaGAGTCTGTTTCCCTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: LESMVRLPRTATLHERQIWEATG*SLFPCL Trigger: GAGACAGGGAAACAGACTTCAGCCAGTGGCTTCCCA...GATCTGCCTTTCATGCAGTGTAGCTGTCCTTGGGAGCCTTACCATGCTCTCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR CCA 90 bp | CAGGCCTCCAAGAGCCAGCTGAGAGGGTACTGGCACTGTCATTTCACCAATGAGAAGGGCTTCCTCACATaGCTTCCACATCACATTTGC | + |
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Preference number: 2 (lower is better) Translates to: QASKSQLRGYWHCHFTNEKGFLT*LPHHIC Trigger: GCAAATGTGATGTGGAAGCCATGTGAGGAAGCCCTT...CTCATTGGTGAAATGACAGTGCCAGTACCCTCTCAGCTGGCTCTTGGAGGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR CAA 90 bp | AGCGTTGGGTGGAGTGAATTGGGAGAGAGAGGGAAACTGTGTTTTTaGAGAGTGTTGCGTTTGAGTGGATCTGGCTTGGGGAACCGAGCT | + |
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Preference number: 2 (lower is better) Translates to: SVGWSELGERGKLCF*RVLRLSGSGLGNRA Trigger: AGCTCGGTTCCCCAAGCCAGATCCACTCAAACGCAACACTCTCAAAAAACACAGTTTCCCTCTCTCTCCCAATTCACTCCACCCAACGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR-3UTR TCA 90 bp | TTAGAGAGCATGGTAAGGCTCCCAAGGACAGCTACACTGCATGAAAGGCAGATCCCAGCAGCTGGTGTGTaGATGAAGGACTGTAGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: LESMVRLPRTATLHERQIPAAGV*MKDCSG Trigger: TCCACTACAGTCCTTCATTCACACACCAGCTGCTGG...GATCTGCCTTTCATGCAGTGTAGCTGTCCTTGGGAGCCTTACCATGCTCTCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR-3UTR TCA 90 bp | TGTAGAGCCACCTGCAGTGGGCTAGACAGATGCTCATCACACCACCCCAGACAGGGAATAAAACATTTGTaGTGTGATGACCCAAGGACT | + |
|
Preference number: 2 (lower is better) Translates to: CRATCSGLDRCSSHHPRQGIKHL*CDDPRT Trigger: AGTCCTTGGGTCATCACATCACAAATGTTTTATTCC...CTGTCTGGGGTGGTGTGATGAGCATCTGTCTAGCCCACTGCAGGTGGCTCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR CAA 90 bp | AGGTGGAGTTTGGCTACTAATTCTATCAAATCAGTGCTCCTTGACTaGAGTGATGACCCCTCCTCCATAAACATTCTCCCAGATGCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: RWSLATNSIKSVLLD*SDDPSSINILPDAP Trigger: AGGGGCATCTGGGAGAATGTTTATGGAGGAGGGGTCATCACTCAAGTCAAGGAGCACTGATTTGATAGAATTAGTAGCCAAACTCCACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR-3UTR CCA 90 bp | TTAGAGAGCATGGTAAGGCTCCCAAGGACAGCTACACTGCATGAAAGGCAGATCTCTGAAGGTGGAGTTTaGCTACTAATTCTATCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: LESMVRLPRTATLHERQISEGGV*LLILSN Trigger: ATTTGATAGAATTAGTAGCCAAACTCCACCTTCAGA...GATCTGCCTTTCATGCAGTGTAGCTGTCCTTGGGAGCCTTACCATGCTCTCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR TCA 72 bp | TCCCGGGCCTCACCCACTGAGTCAGGGACCCGCCTCTaGCCCTCCTTGCCAGTGCCCTATGGCGTCCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: SRASPTESGTRL*PSLPVPYGVHR Trigger: CCTGTGGACGCCATAGGGCACTGGCAAGGAGGGTCAGAGGCGGGTCCCTGACTCAGTGGGTGAGGCCCGGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR GCA 72 bp | CACCACAGCCAGTGCTGCCTTTTGGGCTCTGTAGCCTaGACTGAGTGCACATGTGCATGCGCGCTCCCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: HHSQCCLLGSVA*TECTCACALPL Trigger: GAGGGGGAGCGCGCATGCACATGTGCACTCAGTGCAGGCTACAGAGCCCAAAAGGCAGCACTGGCTGTGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR GCA 72 bp | GCATCTTGCCTGGGCCTCAGGGGACACCACAGCCAGTaGTGCCTTTTGGGCTCTGTAGCCTGCACTGAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: ASCLGLRGHHSQ*CLLGSVACTEC Trigger: GCACTCAGTGCAGGCTACAGAGCCCAAAAGGCAGCACTGGCTGTGGTGTCCCCTGAGGCCCAGGCAAGATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR GCA 72 bp | CGTGTCCGTCCATGCATAGTTTGGGGGCCTCCTCTGTaGAGACCCCATGCACAGGCCTCCAAGAGCCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RVRPCIVWGPPL*RPHAQASKSQL Trigger: CAGCTGGCTCTTGGAGGCCTGTGCATGGGGTCTGCACAGAGGAGGCCCCCAAACTATGCATGGACGGACACG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR CCA 72 bp | TCCCACTCCATGGACATTGGCCAGCATCCCGACCCCTaGGCTGGGCCAGTGTTAGGGGGTTCCTCAGTGACA | + |
|
Preference number: 3 (lower is better) Translates to: SHSMDIGQHPDP*AGPVLGGSSVT Trigger: TGTCACTGAGGAACCCCCTAACACTGGCCCAGCCCAGGGGTCGGGATGCTGGCCAATGTCCATGGAGTGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR-3UTR CAA 90 bp | CATTGGCTTCCTCCTAGCATCTTGCCTGGGCCTCAGGGGACACCACAGCCAGTGCCCCAGGATGGACCTTaGTGTCCCGAGCTCTCACCA | + |
|
Preference number: 3 (lower is better) Translates to: HWLPPSILPGPQGTPQPVPQDGP*CPELSP Trigger: TGGTGAGAGCTCGGGACACAAAGGTCCATCCTGGGG...CACTGGCTGTGGTGTCCCCTGAGGCCCAGGCAAGATGCTAGGAGGAAGCCAATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR TCA 72 bp | GTAGGAGCTGCCTACGGGACCTGGGAAGCCACTGGCTaGAGTCTGTTTCCCTGTCTCAGTCGCCCTACTGCC | + |
|
Preference number: 3 (lower is better) Translates to: VGAAYGTWEATG*SLFPCLSRPTA Trigger: GGCAGTAGGGCGACTGAGACAGGGAAACAGACTTCAGCCAGTGGCTTCCCAGGTCCCGTAGGCAGCTCCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR TCA 72 bp | CAGCCAGTGCTGCCTTTTGGGCTCTGTAGCCTGCACTaGGTGCACATGTGCATGCGCGCTCCCCCTCCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: QPVLPFGLCSLH*VHMCMRAPPPF Trigger: AAAGGGAGGGGGAGCGCGCATGCACATGTGCACTCAGTGCAGGCTACAGAGCCCAAAAGGCAGCACTGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR GCA 72 bp | TCTTGCCTGGGCCTCAGGGGACACCACAGCCAGTGCTaGCTTTTGGGCTCTGTAGCCTGCACTGAGTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: SCLGLRGHHSQC*LLGSVACTECT Trigger: TGTGCACTCAGTGCAGGCTACAGAGCCCAAAAGGCAGCACTGGCTGTGGTGTCCCCTGAGGCCCAGGCAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR GCA 72 bp | CTGAGTCAGGGACCCGCCTCTGACCCTCCTTGCCAGTaGCCTATGGCGTCCACAGGTCAGTCTCAATGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LSQGPASDPPCQ*PMASTGQSQCL Trigger: CAAGCATTGAGACTGACCTGTGGACGCCATAGGGCACTGGCAAGGAGGGTCAGAGGCGGGTCCCTGACTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR CCA 72 bp | AAGGACTCTCCATGGGTAGTCCCACTCCATGGACATTaGCCAGCATCCCGACCCCTGGGCTGGGCCAGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: KDSPWVVPLHGH*PASRPLGWASV Trigger: AACACTGGCCCAGCCCAGGGGTCGGGATGCTGGCCAATGTCCATGGAGTGGGACTACCCATGGAGAGTCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR GCA 72 bp | TGGCTTGAGGAGCCCAGGTCACTCAGTGCTGCGGGATaGCACGGTGCTTGCCAGGAAGTAACCATGCACCAA | + |
|
Preference number: 3 (lower is better) Translates to: WLEEPRSLSAAG*HGACQEVTMHQ Trigger: TTGGTGCATGGTTACTTCCTGGCAAGCACCGTGGCATCCCGCAGCACTGAGTGACCTGGGCTCCTCAAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR CCA 72 bp | GGATGTAGGAGCTGCCTACGGGACCTGGGAAGCCACTaGCTGAAGTCTGTTTCCCTGTCTCAGTCGCCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: GCRSCLRDLGSH*LKSVSLSQSPY Trigger: GTAGGGCGACTGAGACAGGGAAACAGACTTCAGCCAGTGGCTTCCCAGGTCCCGTAGGCAGCTCCTACATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR CCA 72 bp | CAGGTCTGCCTAGAACCAGGAAGAAGGTCCCCAGGATaGACCTTTGTGTCCCGAGCTCTCACCACTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: QVCLEPGRRSPG*TFVSRALTTGR Trigger: CCTCCCAGTGGTGAGAGCTCGGGACACAAAGGTCCATCCTGGGGACCTTCTTCCTGGTTCTAGGCAGACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR CCA 72 bp | GTGCTAGCTAGGCACAGGGCTTCTTGTAGGGCTGTGTaGCAGTGTTGCCACTGTGGGGCCTATCTGGTCGGT | + |
|
Preference number: 3 (lower is better) Translates to: VLARHRASCRAV*QCCHCGAYLVG Trigger: ACCGACCAGATAGGCCCCACAGTGGCAACACTGCCACACAGCCCTACAAGAAGCCCTGTGCCTAGCTAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR TCA 72 bp | CCTGCCAACTTCAAGGCCCAGCAGCTGGTGTGTGAATaGAGGACTGTAGTGGAGGTCAAGGGGCCTGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: PANFKAQQLVCE*RTVVEVKGPAE Trigger: CTCAGCAGGCCCCTTGACCTCCACTACAGTCCTTCATTCACACACCAGCTGCTGGGCCTTGAAGTTGGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR TCA 72 bp | AGTCCCTGCCAACTTCAAGGCCCAGCAGCTGGTGTGTaGATGAAGGACTGTAGTGGAGGTCAAGGGGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SPCQLQGPAAGV*MKDCSGGQGAC Trigger: GCAGGCCCCTTGACCTCCACTACAGTCCTTCATTCACACACCAGCTGCTGGGCCTTGAAGTTGGCAGGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR TCA 72 bp | ACTGTGGGGCCTATCTGGTCGGTGTCTAGACACAGATaGAAGAAGCTGGCCCCCAGCTCTGCAGTACCGGTG | + |
|
Preference number: 3 (lower is better) Translates to: TVGPIWSVSRHR*KKLAPSSAVPV Trigger: CACCGGTACTGCAGAGCTGGGGGCCAGCTTCTTTCATCTGTGTCTAGACACCGACCAGATAGGCCCCACAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR TCA 72 bp | CCCCTCTGCTCTGAAGGACGCTTTGGCTTCATGCGCTaGCCCAGCTTCCTCACATCCCACAGAAGCACACAC | + |
|
Preference number: 3 (lower is better) Translates to: PLCSEGRFGFMR*PSFLTSHRSTH Trigger: GTGTGTGCTTCTGTGGGATGTGAGGAAGCTGGGTCAGCGCATGAAGCCAAAGCGTCCTTCAGAGCAGAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR GCA 72 bp | GAAGTCTGTTTCCCTGTCTCAGTCGCCCTACTGCCCTaGTCTGACCTGCGTCTGATCCCTTCTTGCCATGCC | + |
|
Preference number: 3 (lower is better) Translates to: EVCFPVSVALLP*SDLRLIPSCHA Trigger: GGCATGGCAAGAAGGGATCAGACGCAGGTCAGAGCAGGGCAGTAGGGCGACTGAGACAGGGAAACAGACTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR GCA 72 bp | GATGAAAGAAGCTGGCCCCCAGCTCTGCAGTACCGGTaGTTCTCCAAGGGCAATCAAGCCTCCTCCACACCA | + |
|
Preference number: 3 (lower is better) Translates to: DERSWPPALQYR*FSKGNQASSTP Trigger: TGGTGTGGAGGAGGCTTGATTGCCCTTGGAGAAGCACCGGTACTGCAGAGCTGGGGGCCAGCTTCTTTCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR GCA 72 bp | GGAGTGTGTAGAGCCACCTGCAGTGGGCTAGACAGATaGTCATCACACCACCCCAGACAGGGTTCAGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: GVCRATCSGLDR*SSHHPRQGSGQ Trigger: CTGTCCTGAACCCTGTCTGGGGTGGTGTGATGAGCATCTGTCTAGCCCACTGCAGGTGGCTCTACACACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR GCA 72 bp | AGCCACCCCTCTGCTCTGAAGGACGCTTTGGCTTCATaGGCTGACCCAGCTTCCTCACATCCCACAGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SHPSALKDALAS*ADPASSHPTEA Trigger: TGCTTCTGTGGGATGTGAGGAAGCTGGGTCAGCGCATGAAGCCAAAGCGTCCTTCAGAGCAGAGGGGTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR CCA 72 bp | ACACCACCCCCTTGTGGTAGGAGGGAGGACCTGAACTaGGGCTCCTCTCAGTTTTGGTTGAGGACGCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: TPPPCGRREDLN*GSSQFWLRTPS Trigger: AGATGGCGTCCTCAACCAAAACTGAGAGGAGCCCCAGTTCAGGTCCTCCCTCCTACCACAAGGGGGTGGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCCTCCAAGAGCCAGCTGAGAGGGTACTGGCACTGTCATTTCACCAATGAGGCTTCCACATCACATTaGCTCTGGCAAGCCGCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: QASKSQLRGYWHCHFTNEASTSH*LWQAAL Trigger: CAGCGCGGCTTGCCAGAGCAAATGTGATGTGGAAGC...CTCATTGGTGAAATGACAGTGCCAGTACCCTCTCAGCTGGCTCTTGGAGGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR TCA 72 bp | GCCCTCGTCCCTGACAGCATTAGCCCTGAGAAAGGCTaGCGCTCCTTTGCACTTCTCTCTACTACCCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: ALVPDSISPEKG*RSFALLSTTPS Trigger: GGATGGGGTAGTAGAGAGAAGTGCAAAGGAGCGTCAGCCTTTCTCAGGGCTAATGCTGTCAGGGACGAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR TCA 72 bp | GGGTACTGGCACTGTCATTTCACCAATGAGATGGCTTaGGGAGCCCAGGTCACTCAGTGCTGCGGGATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: GYWHCHFTNEMA*GAQVTQCCGMP Trigger: TGGCATCCCGCAGCACTGAGTGACCTGGGCTCCTCAAGCCATCTCATTGGTGAAATGACAGTGCCAGTACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR GCA 72 bp | GAATGGCCCAGGAAAATGAAGTGCCTCACTCCTCCGTaGCTCAGTGCCTTTACCTGTGAGAGGGGCGCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: EWPRKMKCLTPP*LSAFTCERGAV Trigger: TACTGCGCCCCTCTCACAGGTAAAGGCACTGAGGCACGGAGGAGTGAGGCACTTCATTTTCCTGGGCCATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR CCA 72 bp | CCCAGCTTCCTCACATCCCACAGAAGCACACACATTTaGTGCTGTCCCATCAAGCGGCCTCTCTCCAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: PSFLTSHRSTHI*CCPIKRPLSSD Trigger: GTCACTGGAGAGAGGCCGCTTGATGGGACAGCACCAAATGTGTGTGCTTCTGTGGGATGTGAGGAAGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR TCA 72 bp | TGGCTTCCACATCACATTTGCTCTGGCAAGCCGCGCTaGTCTTCGGAGACAGCCCTGCTGAGTCTTTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: WLPHHICSGKPR*SSETALLSLSL Trigger: CAGAGAAAGACTCAGCAGGGCTGTCTCCGAAGATCAGCGCGGCTTGCCAGAGCAAATGTGATGTGGAAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR TCA 72 bp | GTGCCTCACTCCTCCGTGCCTCAGTGCCTTTACCTGTaGGAGGGGCGCAGTAATGACCACCTCATACACTTT | + |
|
Preference number: 3 (lower is better) Translates to: VPHSSVPQCLYL*EGRSNDHLIHF Trigger: AAAGTGTATGAGGTGGTCATTACTGCGCCCCTCTCACAGGTAAAGGCACTGAGGCACGGAGGAGTGAGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR TCA 72 bp | CCAGCTGAGAGGGTACTGGCACTGTCATTTCACCAATaGGATGGCTTGAGGAGCCCAGGTCACTCAGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PAERVLALSFHQ*DGLRSPGHSVL Trigger: CAGCACTGAGTGACCTGGGCTCCTCAAGCCATCTCATTGGTGAAATGACAGTGCCAGTACCCTCTCAGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR GCA 72 bp | ACCACATCAGCTCTAGCAGCAGACAGAGTTCAGGTCTaGCTAGAACCAGGAAGAAGGTCCCCAGGATGGACC | + |
|
Preference number: 3 (lower is better) Translates to: TTSALAADRVQV*LEPGRRSPGWT Trigger: GGTCCATCCTGGGGACCTTCTTCCTGGTTCTAGGCAGACCTGAACTCTGTCTGCTGCTAGAGCTGATGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR CCA 72 bp | GTGGCCTATGGAAATGACGCCGTTGCTAGGAACCCTTaGCCAATGGCTATCCCAACATCAGGTCTGGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VAYGNDAVARNP*PMAIPTSGLAE Trigger: CTCTGCCAGACCTGATGTTGGGATAGCCATTGGCCAAGGGTTCCTAGCAACGGCGTCATTTCCATAGGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR CCA 72 bp | CTATCTGGTCGGTGTCTAGACACAGATGAAAGAAGCTaGCCCCCAGCTCTGCAGTACCGGTGCTTCTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LSGRCLDTDERS*PPALQYRCFSK Trigger: CTTGGAGAAGCACCGGTACTGCAGAGCTGGGGGCCAGCTTCTTTCATCTGTGTCTAGACACCGACCAGATAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCTCCTAGCATCTTGCCTGGGCCTCAGGGGACACCACAGCCAGTGCTGCCTGGGAAACTGTGTTTTTaGAGAGTGTTGCGTTTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: LPPSILPGPQGTPQPVLPGKLCF*RVLRLS Trigger: ACTCAAACGCAACACTCTCAAAAAACACAGTTTCCC...AGGCAGCACTGGCTGTGGTGTCCCCTGAGGCCCAGGCAAGATGCTAGGAGGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR GCA 72 bp | AGCTTCCTCACATCCCACAGAAGCACACACATTTGGTaGTGTCCCATCAAGCGGCCTCTCTCCAGTGACTAC | + |
|
Preference number: 3 (lower is better) Translates to: SFLTSHRSTHIW*CPIKRPLSSDY Trigger: GTAGTCACTGGAGAGAGGCCGCTTGATGGGACAGCACCAAATGTGTGTGCTTCTGTGGGATGTGAGGAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR-3UTR CAA 90 bp | TTAGAGAGCATGGTAAGGCTCCCAAGGACAGCTACACTGCATGAAAGGCAGATCCAGATGCCCCTGATCTaGGGTAGAGGAGAAGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LESMVRLPRTATLHERQIQMPLI*GRGEAQ Trigger: CTGGGCTTCTCCTCTACCCAAGATCAGGGGCATCTG...GATCTGCCTTTCATGCAGTGTAGCTGTCCTTGGGAGCCTTACCATGCTCTCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR GCA 72 bp | TGGTCCTGGAAAGTTGAATGGCCCAGGAAAATGAAGTaGCTCACTCCTCCGTGCCTCAGTGCCTTTACCTGT | + |
|
Preference number: 3 (lower is better) Translates to: WSWKVEWPRKMK*LTPPCLSAFTC Trigger: ACAGGTAAAGGCACTGAGGCACGGAGGAGTGAGGCACTTCATTTTCCTGGGCCATTCAACTTTCCAGGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR TCA 72 bp | GAGCATGGTAAGGCTCCCAAGGACAGCTACACTGCATaGAAGGCAGATCTGTGTCTCCTAAATCTAGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: EHGKAPKDSYTA*KADLCLLNLGW Trigger: CCAGCCTAGATTTAGGAGACACAGATCTGCCTTTCATGCAGTGTAGCTGTCCTTGGGAGCCTTACCATGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR TCA 72 bp | TGTGTTGGTCCTGGAAAGTTGAATGGCCCAGGAAAATaGAGTGCCTCACTCCTCCGTGCCTCAGTGCCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: CVGPGKLNGPGK*SASLLRASVPL Trigger: TAAAGGCACTGAGGCACGGAGGAGTGAGGCACTTCATTTTCCTGGGCCATTCAACTTTCCAGGACCAACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR TCA 72 bp | CATTTGGTGCTGTCCCATCAAGCGGCCTCTCTCCAGTaGCTACCAAGAGGCTTCCAGATTGCAACTCTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: HLVLSHQAASLQ*LPRGFQIATLD Trigger: ATCTAGAGTTGCAATCTGGAAGCCTCTTGGTAGTCACTGGAGAGAGGCCGCTTGATGGGACAGCACCAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR TCA 72 bp | CATCAGGTCTGGCAGAGTTCCTCAGATAAGTGGAAATaGCAAAGGGCTTCCTCACATGGCTTCCACATCACA | + |
|
Preference number: 3 (lower is better) Translates to: HQVWQSSSDKWK*QRASSHGFHIT Trigger: TGTGATGTGGAAGCCATGTGAGGAAGCCCTTTGTCATTTCCACTTATCTGAGGAACTCTGCCAGACCTGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR GCA 72 bp | GGAAATCTTTCTAGAGTTTCAGAATGTGAACTCACGTaGTTGCCGCAGAAGATGAAGACACGGGTGCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GNLSRVSECELT*LPQKMKTRVLC Trigger: GCAGAGCACCCGTGTCTTCATCTTCTGCGGCAAGCACGTGAGTTCACATTCTGAAACTCTAGAAAGATTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR TCA 72 bp | CATTTCAGGTTCATAGGCTCCTACAACACTGCACTCTaGAATTCTCTGGTTGATGAAGCCACTATCATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: HFRFIGSYNTAL*NSLVDEATIIF Trigger: GAAGATGATAGTGGCTTCATCAACCAGAGAATTTCAGAGTGCAGTGTTGTAGGAGCCTATGAACCTGAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR CAA 72 bp | CAAGGACTCTCCATGGGTAGTCCCACTCCATGGACATaGGCCAGCATCCCGACCCCTGGGCTGGGCCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QGLSMGSPTPWT*ASIPTPGLGQC Trigger: ACACTGGCCCAGCCCAGGGGTCGGGATGCTGGCCAATGTCCATGGAGTGGGACTACCCATGGAGAGTCCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| 3UTR CAA 72 bp | GCCCAGGTCACTCAGTGCTGCGGGATGCCACGGTGCTaGCCAGGAAGTAACCATGCACCAAAGCAAAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AQVTQCCGMPRC*PGSNHAPKQRH Trigger: GTGCCTTTGCTTTGGTGCATGGTTACTTCCTGGCAAGCACCGTGGCATCCCGCAGCACTGAGTGACCTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
||
| CDS-3UTR TCA 90 bp | AGAAGCCCAGCCTGCCCCACCCATGGGTGGGCACATTACAGGTCCACATGTCAGGGCAGCGCATGGGTTTaGAGCAGTTGTCTCCATTGT | + |
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Preference number: 4 (lower is better) Translates to: RSPACPTHGWAHYRSTCQGSAWV*SSCLHC Trigger: ACAATGGAGACAACTGCTTCAAACCCATGCGCTGCC...CTGACATGTGGACCTGTAATGTGCCCACCCATGGGTGGGGCAGGCTGGGCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| CDS-3UTR CCA 90 bp | CAGGCCTCCAAGAGCCAGCTGAGAGGGTACTGGCACTGTCATTTCACCAATGAGTACAGTAGGTGGCCATaGCTGGGCAGCGCATGGGTT | + |
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Preference number: 4 (lower is better) Translates to: QASKSQLRGYWHCHFTNEYSRWP*LGSAWV Trigger: AACCCATGCGCTGCCCAGCCATGGCCACCTACTGTA...CTCATTGGTGAAATGACAGTGCCAGTACCCTCTCAGCTGGCTCTTGGAGGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR CAA 72 bp | CAGTGCCCTATGGCGTCCACAGGTCAGTCTCAATGCTaGCTGCTGCTGCTGGTGGTGTGCATGTTCCATGTG | + |
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Preference number: 4 (lower is better) Translates to: QCPMASTGQSQC*LLLLVVCMFHV Trigger: CACATGGAACATGCACACCACCAGCAGCAGCAGCAAGCATTGAGACTGACCTGTGGACGCCATAGGGCACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR CAA 72 bp | GACAAAGGGCTTCCTCACATGGCTTCCACATCACATTaGCTCTGGCAAGCCGCGCTGATCTTCGGAGACAGC | + |
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Preference number: 4 (lower is better) Translates to: DKGLPHMASTSH*LWQAALIFGDS Trigger: GCTGTCTCCGAAGATCAGCGCGGCTTGCCAGAGCAAATGTGATGTGGAAGCCATGTGAGGAAGCCCTTTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| CDS-3UTR CCA 90 bp | GAAAACCACATCAGCTCTAGCAGCAGACAGAGTTCAGGTCTGCCTAGAACCAGGGTAGGTGGCCATGGCTaGGCAGCGCATGGGTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: ENHISSSSRQSSGLPRTRVGGHG*AAHGFE Trigger: TTCAAACCCATGCGCTGCCCAGCCATGGCCACCTAC...CCTGGTTCTAGGCAGACCTGAACTCTGTCTGCTGCTAGAGCTGATGTGGTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR CAA 72 bp | GTGGATTTCATTTCCTTGCTGGGTGAGAGCCTGGGGTaGGCAGAGACACAACCAAGGGAAGTGCTAGGCATC | + |
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Preference number: 4 (lower is better) Translates to: VDFISLLGESLG*AETQPREVLGI Trigger: GATGCCTAGCACTTCCCTTGGTTGTGTCTCTGCCAACCCCAGGCTCTCACCCAGCAAGGAAATGAAATCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR CAA 72 bp | CTGACAGCATTAGCCCTGAGAAAGGCTGACGCTCCTTaGCACTTCTCTCTACTACCCCATCCCATGTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: LTALALRKADAP*HFSLLPHPMFP Trigger: AGGGAACATGGGATGGGGTAGTAGAGAGAAGTGCAAAGGAGCGTCAGCCTTTCTCAGGGCTAATGCTGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| CDS-3UTR CCA 90 bp | TTAGAGAGCATGGTAAGGCTCCCAAGGACAGCTACACTGCATGAAAGGCAGATCACTGGCAACAGGAGGTaGCAGATGCATGCTTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: LESMVRLPRTATLHERQITGNRR*QMHAWN Trigger: ATTCCAAGCATGCATCTGCCACCTCCTGTTGCCAGT...GATCTGCCTTTCATGCAGTGTAGCTGTCCTTGGGAGCCTTACCATGCTCTCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR CAA 72 bp | TGGAGTGAATTGGGAGAGAGAGGGAAACTGTGTTTTTaGAGAGTGTTGCGTTTGAGTGGATCTGGCTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: WSELGERGKLCF*RVLRLSGSGLG Trigger: CCCCAAGCCAGATCCACTCAAACGCAACACTCTCAAAAAACACAGTTTCCCTCTCTCTCCCAATTCACTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| 3UTR CAA 72 bp | AATCTTTCTAGAGTTTCAGAATGTGAACTCACGTGCTaGCCGCAGAAGATGAAGACACGGGTGCTCTGCATC | + |
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Preference number: 4 (lower is better) Translates to: NLSRVSECELTC*PQKMKTRVLCI Trigger: GATGCAGAGCACCCGTGTCTTCATCTTCTGCGGCAAGCACGTGAGTTCACATTCTGAAACTCTAGAAAGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| CDS TCA 90 bp | GTGTGGTCATACAGTAGGTGGCCATGGCTGGGCAGCGCATGGGTTTaGAGCAGTTGTCTCCATTGTAGGCACACACGTGGCACTCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: VWSYSRWPWLGSAWV*SSCLHCRHTRGTPE Trigger: CTCTGGAGTGCCACGTGTGTGCCTACAATGGAGACAACTGCTTCAAACCCATGCGCTGCCCAGCCATGGCCACCTACTGTATGACCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| CDS GCA 90 bp | GCCAGCACCGTTGCAGAGGTAGTACTGGCAACAGGAGGTGGCAGATaGATGCTTGGAATAGCCATCGTACACGGTTTCAAAGCAGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: ASTVAEVVLATGGGR*MLGIAIVHGFKAAG Trigger: CCCAGCTGCTTTGAAACCGTGTACGATGGCTATTCCAAGCATGCATCTGCCACCTCCTGTTGCCAGTACTACCTCTGCAACGGTGCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| CDS CCA 90 bp | CGTTGCAGAGGTAGTACTGGCAACAGGAGGTGGCAGATGCATGCTTaGAATAGCCATCGTACACGGTTTCAAAGCAGCTGGGGACACAGG | + |
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Preference number: 5 (lower is better) Translates to: RCRGSTGNRRWQMHA*NSHRTRFQSSWGHR Trigger: CCTGTGTCCCCAGCTGCTTTGAAACCGTGTACGATGGCTATTCCAAGCATGCATCTGCCACCTCCTGTTGCCAGTACTACCTCTGCAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| CDS CCA 90 bp | TGGGGTGAAGTAAGTTCGTGTGGTCATACAGTAGGTGGCCATGGCTaGGCAGCGCATGGGTTTGAAGCAGTTGTCTCCATTGTAGGCACA | + |
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Preference number: 5 (lower is better) Translates to: WGEVSSCGHTVGGHG*AAHGFEAVVSIVGT Trigger: TGTGCCTACAATGGAGACAACTGCTTCAAACCCATGCGCTGCCCAGCCATGGCCACCTACTGTATGACCACACGAACTTACTTCACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| CDS-3UTR CAA 90 bp | TTAGAGAGCATGGTAAGGCTCCCAAGGACAGCTACACTGCATGAAAGGCAGATCGGGCAGCGCATGGGTTaGAAGCAGTTGTCTCCATTG | + |
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Preference number: 5 (lower is better) Translates to: LESMVRLPRTATLHERQIGQRMG*KQLSPL Trigger: CAATGGAGACAACTGCTTCAAACCCATGCGCTGCCC...GATCTGCCTTTCATGCAGTGTAGCTGTCCTTGGGAGCCTTACCATGCTCTCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| CDS TCA 72 bp | TACAGTAGGTGGCCATGGCTGGGCAGCGCATGGGTTTaGAGCAGTTGTCTCCATTGTAGGCACACACGTGGC | + |
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Preference number: 6 (lower is better) Translates to: YSRWPWLGSAWV*SSCLHCRHTRG Trigger: GCCACGTGTGTGCCTACAATGGAGACAACTGCTTCAAACCCATGCGCTGCCCAGCCATGGCCACCTACTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| CDS CCA 72 bp | CAGCACCGTTGCAGAGGTAGTACTGGCAACAGGAGGTaGCAGATGCATGCTTGGAATAGCCATCGTACACGG | + |
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Preference number: 6 (lower is better) Translates to: QHRCRGSTGNRR*QMHAWNSHRTR Trigger: CCGTGTACGATGGCTATTCCAAGCATGCATCTGCCACCTCCTGTTGCCAGTACTACCTCTGCAACGGTGCTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| CDS TCA 72 bp | GGACACAGGACTTCCTCACCTTCATCCGGTATGGGGTaGAGTAAGTTCGTGTGGTCATACAGTAGGTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: GHRTSSPSSGMG*SKFVWSYSRWP Trigger: TGGCCACCTACTGTATGACCACACGAACTTACTTCACCCCATACCGGATGAAGGTGAGGAAGTCCTGTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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| CDS GCA 72 bp | GTTGCAGAGGTAGTACTGGCAACAGGAGGTGGCAGATaGATGCTTGGAATAGCCATCGTACACGGTTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: VAEVVLATGGGR*MLGIAIVHGFK Trigger: TTTGAAACCGTGTACGATGGCTATTCCAAGCATGCATCTGCCACCTCCTGTTGCCAGTACTACCTCTGCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023259.15 |
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