Pregenerated sensors for LYN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042228Ensembl transcript IDs: ENSMUST00000041377.13, ENSMUST00000103010.4
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCTCCAAAGGGCTCCAGTTCAGCAGTGGTCCCTCTGTGTGCCCATaGACAGCGCTCCAGCAGAGTGAGCACGTGCTGCCTCCTGTCCAG | + |
|
Preference number: 1 (lower is better) Translates to: SSKGLQFSSGPSVCP*TALQQSEHVLPPVQ Trigger: CTGGACAGGAGGCAGCACGTGCTCACTCTGCTGGAGCGCTGTGCATGGGCACACAGAGGGACCACTGCTGAACTGGAGCCCTTTGGAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR GCA 90 bp | TGGTGTAGCTCCAAAGGGCTCCAGTTCAGCAGTGGTCCCTCTGTGTaGCCATGCACAGCGCTCCAGCAGAGTGAGCACGTGCTGCCTCCT | + |
|
Preference number: 1 (lower is better) Translates to: WCSSKGLQFSSGPSV*PCTALQQSEHVLPP Trigger: AGGAGGCAGCACGTGCTCACTCTGCTGGAGCGCTGTGCATGGGCACACAGAGGGACCACTGCTGAACTGGAGCCCTTTGGAGCTACACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR TCA 90 bp | CAGCAGTGGTCCCTCTGTGTGCCCATGCACAGCGCTCCAGCAGAGTaGGCACGTGCTGCCTCCTGTCCAGTGATCTTACCACAAAGGAAA | + |
|
Preference number: 1 (lower is better) Translates to: QQWSLCVPMHSAPAE*ARAASCPVILPQRK Trigger: TTTCCTTTGTGGTAAGATCACTGGACAGGAGGCAGCACGTGCTCACTCTGCTGGAGCGCTGTGCATGGGCACACAGAGGGACCACTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR GCA 90 bp | GTCCCTCTGTGTGCCCATGCACAGCGCTCCAGCAGAGTGAGCACGTaGTGCCTCCTGTCCAGTGATCTTACCACAAAGGAAAATGTTCAA | + |
|
Preference number: 1 (lower is better) Translates to: VPLCAHAQRSSRVST*CLLSSDLTTKENVQ Trigger: TTGAACATTTTCCTTTGTGGTAAGATCACTGGACAGGAGGCAGCACGTGCTCACTCTGCTGGAGCGCTGTGCATGGGCACACAGAGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR TCA 90 bp | AGCAGCGGCCACCCATTTAAGAAACAGCATCCAGGGTGTTCTTCCTaGGTTAATTCATCACGTCCATCAGGAACCAGGAACACAGAGGGT | + |
|
Preference number: 1 (lower is better) Translates to: SSGHPFKKQHPGCSS*VNSSRPSGTRNTEG Trigger: ACCCTCTGTGTTCCTGGTTCCTGATGGACGTGATGAATTAACTCAGGAAGAACACCCTGGATGCTGTTTCTTAAATGGGTGGCCGCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR TCA 90 bp | TGCACAGCGCTCCAGCAGAGTGAGCACGTGCTGCCTCCTGTCCAGTaGTCTTACCACAAAGGAAAATGTTCAATAGTCTCATTTTCTGGG | + |
|
Preference number: 1 (lower is better) Translates to: CTALQQSEHVLPPVQ*SYHKGKCSIVSFSG Trigger: CCCAGAAAATGAGACTATTGAACATTTTCCTTTGTGGTAAGATCACTGGACAGGAGGCAGCACGTGCTCACTCTGCTGGAGCGCTGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR CCA 90 bp | GCATGGGGTTTATTTTTGCTAAGTGAGTTTAGTTCTTGTTGCATCTaGGAATTTGTTGCAACAGTCTCTGAACCTGAGTCACTCGGCCCC | + |
|
Preference number: 1 (lower is better) Translates to: AWGLFLLSEFSSCCI*EFVATVSEPESLGP Trigger: GGGGCCGAGTGACTCAGGTTCAGAGACTGTTGCAACAAATTCCCAGATGCAACAAGAACTAAACTCACTTAGCAAAAATAAACCCCATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR GCA 90 bp | TGCTCAGCATGGGGTTTATTTTTGCTAAGTGAGTTTAGTTCTTGTTaGATCTGGGAATTTGTTGCAACAGTCTCTGAACCTGAGTCACTC | + |
|
Preference number: 1 (lower is better) Translates to: CSAWGLFLLSEFSSC*IWEFVATVSEPESL Trigger: GAGTGACTCAGGTTCAGAGACTGTTGCAACAAATTCCCAGATGCAACAAGAACTAAACTCACTTAGCAAAAATAAACCCCATGCTGAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR TCA 90 bp | CTCCCAAAGGACACCATCAGGAAAGCCTTTAGAGAATCCCATAATTaGAATACCTGGACCATTAAAAACATTCCTTTAGAGCTTGAGGCT | + |
|
Preference number: 1 (lower is better) Translates to: LPKDTIRKAFRESHN*NTWTIKNIPLELEA Trigger: AGCCTCAAGCTCTAAAGGAATGTTTTTAATGGTCCAGGTATTTCAATTATGGGATTCTCTAAAGGCTTTCCTGATGGTGTCCTTTGGGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR TCA 90 bp | AATGTTTTAGTGATTTCTTTAAGGATTCTTCGCACTTCCTTTCCATaGAATAAAGTAGACAATGCAGGTGAGTTTGAAATGAGAGTAGGG | + |
|
Preference number: 1 (lower is better) Translates to: NVLVISLRILRTSFP*NKVDNAGEFEMRVG Trigger: CCCTACTCTCATTTCAAACTCACCTGCATTGTCTACTTTATTTCATGGAAAGGAAGTGCGAAGAATCCTTAAAGAAATCACTAAAACATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR TCA 90 bp | TCCTCAGCCCTCCAACCTGAAATGCTCCAGTTGTGGAGGTGCAGCCTGCACAAGAGCGCTCCAGCAGAGTaGGCACGTGCTGCCTCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SSALQPEMLQLWRCSLHKSAPAE*ARAASC Trigger: ACAGGAGGCAGCACGTGCTCACTCTGCTGGAGCGCT...CTTGTGCAGGCTGCACCTCCACAACTGGAGCATTTCAGGTTGGAGGGCTGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR CCA 90 bp | TCCTCAGCCCTCCAACCTGAAATGCTCCAGTTGTGGAGGTGCAGCCTGCACAAGGGGAGGTCTGGGCAGTaGTGTAGCTCCAAAGGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: SSALQPEMLQLWRCSLHKGRSGQ*CSSKGL Trigger: GAGCCCTTTGGAGCTACACCACTGCCCAGACCTCCC...CTTGTGCAGGCTGCACCTCCACAACTGGAGCATTTCAGGTTGGAGGGCTGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR GCA 90 bp | ACAGATCTGTGGCTACCCAGGCCATCAACTCCTCAGCCCTCCAACCTGAAATGCAGTGGTCCCTCTGTGTaGCCATGCACAGCGCTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: TDLWLPRPSTPQPSNLKCSGPSV*PCTALQ Trigger: CTGGAGCGCTGTGCATGGGCACACAGAGGGACCACT...GCATTTCAGGTTGGAGGGCTGAGGAGTTGATGGCCTGGGTAGCCACAGATCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR CCA 90 bp | TCCTCAGCCCTCCAACCTGAAATGCTCCAGTTGTGGAGGTGCAGCCTGCACAAGGCTCCAGTTCAGCAGTaGTCCCTCTGTGTGCCCATG | + |
|
Preference number: 2 (lower is better) Translates to: SSALQPEMLQLWRCSLHKAPVQQ*SLCVPM Trigger: CATGGGCACACAGAGGGACCACTGCTGAACTGGAGC...CTTGTGCAGGCTGCACCTCCACAACTGGAGCATTTCAGGTTGGAGGGCTGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR GCA 90 bp | TCCTCAGCCCTCCAACCTGAAATGCTCCAGTTGTGGAGGTGCAGCCTGCACAAGTACAGAATGACTCCCTaGCCTTCCCCCACCAACCAG | + |
|
Preference number: 2 (lower is better) Translates to: SSALQPEMLQLWRCSLHKYRMTP*PSPTNQ Trigger: CTGGTTGGTGGGGGAAGGGCAGGGAGTCATTCTGTA...CTTGTGCAGGCTGCACCTCCACAACTGGAGCATTTCAGGTTGGAGGGCTGAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR GCA 90 bp | ACAGATCTGTGGCTACCCAGGCCATCAACTCCTCAGCCCTCCAACCTGAAATGCTACAGAATGACTCCCTaGCCTTCCCCCACCAACCAG | + |
|
Preference number: 2 (lower is better) Translates to: TDLWLPRPSTPQPSNLKCYRMTP*PSPTNQ Trigger: CTGGTTGGTGGGGGAAGGGCAGGGAGTCATTCTGTA...GCATTTCAGGTTGGAGGGCTGAGGAGTTGATGGCCTGGGTAGCCACAGATCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR GCA 90 bp | TCCTCAGCCCTCCAACCTGAAATGCTCCAGTTGTGGAGGTGCAGCCTGCACAAGCCTGTAGAGCCAGTGTaGATATTAGAAAGAGAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: SSALQPEMLQLWRCSLHKPVEPV*ILEREG Trigger: ACCCTCTCTTTCTAATATGCACACTGGCTCTACAGG...CTTGTGCAGGCTGCACCTCCACAACTGGAGCATTTCAGGTTGGAGGGCTGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR CCA 90 bp | CTGCCCTTCCCCCACCAACCAGCTCTTATTTATACATGGACAAGAGTTGAGAATGCTCCAGTTCAGCAGTaGTCCCTCTGTGTGCCCATG | + |
|
Preference number: 2 (lower is better) Translates to: LPFPHQPALIYTWTRVENAPVQQ*SLCVPM Trigger: CATGGGCACACAGAGGGACCACTGCTGAACTGGAGC...ATTCTCAACTCTTGTCCATGTATAAATAAGAGCTGGTTGGTGGGGGAAGGGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR TCA 90 bp | TCCTCAGCCCTCCAACCTGAAATGCTCCAGTTGTGGAGGTGCAGCCTGCACAAGTACATGGACAAGAGTTaGGAATCTGATACACAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: SSALQPEMLQLWRCSLHKYMDKS*ESDTQD Trigger: GTCTTGTGTATCAGATTCTCAACTCTTGTCCATGTA...CTTGTGCAGGCTGCACCTCCACAACTGGAGCATTTCAGGTTGGAGGGCTGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR TCA 90 bp | ACAGATCTGTGGCTACCCAGGCCATCAACTCCTCAGCCCTCCAACCTGAAATGCTACATGGACAAGAGTTaGGAATCTGATACACAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: TDLWLPRPSTPQPSNLKCYMDKS*ESDTQD Trigger: GTCTTGTGTATCAGATTCTCAACTCTTGTCCATGTA...GCATTTCAGGTTGGAGGGCTGAGGAGTTGATGGCCTGGGTAGCCACAGATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR CCA 90 bp | ACAGATCTGTGGCTACCCAGGCCATCAACTCCTCAGCCCTCCAACCTGAAATGCAGTTCTTGTTGCATCTaGGAATTTGTTGCAACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: TDLWLPRPSTPQPSNLKCSSCCI*EFVATV Trigger: GACTGTTGCAACAAATTCCCAGATGCAACAAGAACT...GCATTTCAGGTTGGAGGGCTGAGGAGTTGATGGCCTGGGTAGCCACAGATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR GCA 90 bp | ACAGATCTGTGGCTACCCAGGCCATCAACTCCTCAGCCCTCCAACCTGAAATGCGAGTTTAGTTCTTGTTaGATCTGGGAATTTGTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: TDLWLPRPSTPQPSNLKCEFSSC*IWEFVA Trigger: TGCAACAAATTCCCAGATGCAACAAGAACTAAACTC...GCATTTCAGGTTGGAGGGCTGAGGAGTTGATGGCCTGGGTAGCCACAGATCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR CAA 90 bp | TGCATATTAGAAAGAGAGGGTGTTTGTATTCTGACTGTGGTCCCATaGAGCAGCGGCCACCCATTTAAGAAACAGCATCCAGGGTGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: CILEREGVCILTVVP*SSGHPFKKQHPGCS Trigger: AGAACACCCTGGATGCTGTTTCTTAAATGGGTGGCCGCTGCTCAATGGGACCACAGTCAGAATACAAACACCCTCTCTTTCTAATATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR GCA 90 bp | GTACACAGTAGCATAAGTGAAAGGGGCAGACACAGCAGTTTCCAATCAGCGTTGCCTGTAGAGCCAGTGTaGATATTAGAAAGAGAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: VHSSISERGRHSSFQSALPVEPV*ILEREG Trigger: ACCCTCTCTTTCTAATATGCACACTGGCTCTACAGG...CAACGCTGATTGGAAACTGCTGTGTCTGCCCCTTTCACTTATGCTACTGTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR GCA 90 bp | GTCAATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATAGAGTGAGCACGTGCTaGCTCCTGTCCAGTGATCTT | + |
|
Preference number: 2 (lower is better) Translates to: VNQMNKCTHAAFGNRHSDRVSTC*LLSSDL Trigger: AAGATCACTGGACAGGAGGCAGCACGTGCTCACTCT...ATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR TCA 90 bp | CTGCCCTTCCCCCACCAACCAGCTCTTATTTATACATGGACAAGAGTTGAGAATGGTCTCATAAAGTCCTaGCAGATTAGATGGATGTTT | + |
|
Preference number: 2 (lower is better) Translates to: LPFPHQPALIYTWTRVENGLIKS*QIRWMF Trigger: AAACATCCATCTAATCTGTCAGGACTTTATGAGACC...ATTCTCAACTCTTGTCCATGTATAAATAAGAGCTGGTTGGTGGGGGAAGGGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR TCA 90 bp | GTACACAGTAGCATAAGTGAAAGGGGCAGACACAGCAGTTTCCAATCAGCGTTGAGTCATTTGAGGCAATaGGAGAAATGCTTTGTATTC | + |
|
Preference number: 2 (lower is better) Translates to: VHSSISERGRHSSFQSALSHLRQ*EKCFVF Trigger: GAATACAAAGCATTTCTCTCATTGCCTCAAATGACT...CAACGCTGATTGGAAACTGCTGTGTCTGCCCCTTTCACTTATGCTACTGTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR TCA 90 bp | GTCAATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATCCAGGGTGTTCTTCCTaGGTTAATTCATCACGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: VNQMNKCTHAAFGNRHSDPGCSS*VNSSRP Trigger: TGGACGTGATGAATTAACTCAGGAAGAACACCCTGG...ATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR TCA 90 bp | GTCAATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATCCAGAGGCTTTTCCATaGCTCCTGATTCCTACATGT | + |
|
Preference number: 2 (lower is better) Translates to: VNQMNKCTHAAFGNRHSDPEAFP*LLIPTC Trigger: ACATGTAGGAATCAGGAGTCATGGAAAAGCCTCTGG...ATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR TCA 90 bp | AATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATATACCAGGGTGTTCTTCCTaGGTTAATTCATCACGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: NQMNKCTHAAFGNRHSDIPGCSS*VNSSRP Trigger: TGGACGTGATGAATTAACTCAGGAAGAACACCCTGG...TATATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR TCA 90 bp | AATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATATACCAGAGGCTTTTCCATaGCTCCTGATTCCTACATGT | + |
|
Preference number: 2 (lower is better) Translates to: NQMNKCTHAAFGNRHSDIPEAFP*LLIPTC Trigger: ACATGTAGGAATCAGGAGTCATGGAAAAGCCTCTGG...TATATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR CCA 90 bp | GTCAATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATAGTTCTTGTTGCATCTaGGAATTTGTTGCAACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: VNQMNKCTHAAFGNRHSDSSCCI*EFVATV Trigger: GACTGTTGCAACAAATTCCCAGATGCAACAAGAACT...ATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATTGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR TCA 90 bp | AATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATATAGGTCTCATAAAGTCCTaGCAGATTAGATGGATGTTT | + |
|
Preference number: 2 (lower is better) Translates to: NQMNKCTHAAFGNRHSDIGLIKS*QIRWMF Trigger: AAACATCCATCTAATCTGTCAGGACTTTATGAGACC...TATATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR CCA 90 bp | GTCAATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATGCTCTTATTTATACATaGACAAGAGTTGAGAATCTG | + |
|
Preference number: 2 (lower is better) Translates to: VNQMNKCTHAAFGNRHSDALIYT*TRVENL Trigger: CAGATTCTCAACTCTTGTCCATGTATAAATAAGAGC...ATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATTGAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR GCA 90 bp | AATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATATAGAGTTTAGTTCTTGTTaGATCTGGGAATTTGTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: NQMNKCTHAAFGNRHSDIEFSSC*IWEFVA Trigger: TGCAACAAATTCCCAGATGCAACAAGAACTAAACTC...TATATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR CCA 90 bp | AATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATATAGCTCTTATTTATACATaGACAAGAGTTGAGAATCTG | + |
|
Preference number: 2 (lower is better) Translates to: NQMNKCTHAAFGNRHSDIALIYT*TRVENL Trigger: CAGATTCTCAACTCTTGTCCATGTATAAATAAGAGC...TATATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR GCA 72 bp | GGGCTCCAGTTCAGCAGTGGTCCCTCTGTGTGCCCATaGACAGCGCTCCAGCAGAGTGAGCACGTGCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: GLQFSSGPSVCP*TALQQSEHVLP Trigger: AGGCAGCACGTGCTCACTCTGCTGGAGCGCTGTGCATGGGCACACAGAGGGACCACTGCTGAACTGGAGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR GCA 72 bp | TCCAAAGGGCTCCAGTTCAGCAGTGGTCCCTCTGTGTaGCCATGCACAGCGCTCCAGCAGAGTGAGCACGTG | + |
|
Preference number: 3 (lower is better) Translates to: SKGLQFSSGPSV*PCTALQQSEHV Trigger: CACGTGCTCACTCTGCTGGAGCGCTGTGCATGGGCACACAGAGGGACCACTGCTGAACTGGAGCCCTTTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR TCA 72 bp | TCCCTCTGTGTGCCCATGCACAGCGCTCCAGCAGAGTaGGCACGTGCTGCCTCCTGTCCAGTGATCTTACCA | + |
|
Preference number: 3 (lower is better) Translates to: SLCVPMHSAPAE*ARAASCPVILP Trigger: TGGTAAGATCACTGGACAGGAGGCAGCACGTGCTCACTCTGCTGGAGCGCTGTGCATGGGCACACAGAGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR GCA 72 bp | CCCAGGCCATCAACTCCTCAGCCCTCCAACCTGAAATaGTCCAGTTGTGGAGGTGCAGCCTGCACAAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: PRPSTPQPSNLK*SSCGGAACTSS Trigger: TGAACTTGTGCAGGCTGCACCTCCACAACTGGAGCATTTCAGGTTGGAGGGCTGAGGAGTTGATGGCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR TCA 72 bp | CAGCCTGCACAAGTTCATGCAGTAGACTGTACAGAATaGCTCCCTGCCCTTCCCCCACCAACCAGCTCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: QPAQVHAVDCTE*LPALPPPTSSY Trigger: ATAAGAGCTGGTTGGTGGGGGAAGGGCAGGGAGTCATTCTGTACAGTCTACTGCATGAACTTGTGCAGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR TCA 72 bp | CTCCAGCAGAGTGAGCACGTGCTGCCTCCTGTCCAGTaGTCTTACCACAAAGGAAAATGTTCAATAGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LQQSEHVLPPVQ*SYHKGKCSIVS Trigger: TGAGACTATTGAACATTTTCCTTTGTGGTAAGATCACTGGACAGGAGGCAGCACGTGCTCACTCTGCTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR GCA 72 bp | TCCAACCTGAAATGCTCCAGTTGTGGAGGTGCAGCCTaGACAAGTTCATGCAGTAGACTGTACAGAATGACT | + |
|
Preference number: 3 (lower is better) Translates to: SNLKCSSCGGAA*TSSCSRLYRMT Trigger: AGTCATTCTGTACAGTCTACTGCATGAACTTGTGCAGGCTGCACCTCCACAACTGGAGCATTTCAGGTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR CAA 90 bp | GTACACAGTAGCATAAGTGAAAGGGGCAGACACAGCAGTTTCCAATCAGCGTTGGCATCTGGGAATTTGTaGCAACAGTCTCTGAACCTG | + |
|
Preference number: 3 (lower is better) Translates to: VHSSISERGRHSSFQSALASGNL*QQSLNL Trigger: CAGGTTCAGAGACTGTTGCAACAAATTCCCAGATGC...CAACGCTGATTGGAAACTGCTGTGTCTGCCCCTTTCACTTATGCTACTGTGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCCTTCCCCCACCAACCAGCTCTTATTTATACATGGACAAGAGTTGAGAATAGAAAGAGAGGGTGTTaGTATTCTGACTGTGGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LPFPHQPALIYTWTRVENRKRGC*YSDCGP Trigger: GGGACCACAGTCAGAATACAAACACCCTCTCTTTCT...ATTCTCAACTCTTGTCCATGTATAAATAAGAGCTGGTTGGTGGGGGAAGGGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCCTTCCCCCACCAACCAGCTCTTATTTATACATGGACAAGAGTTGAGAATGCATCTGGGAATTTGTaGCAACAGTCTCTGAACCTG | + |
|
Preference number: 3 (lower is better) Translates to: LPFPHQPALIYTWTRVENASGNL*QQSLNL Trigger: CAGGTTCAGAGACTGTTGCAACAAATTCCCAGATGC...ATTCTCAACTCTTGTCCATGTATAAATAAGAGCTGGTTGGTGGGGGAAGGGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR TCA 72 bp | CACCCATTTAAGAAACAGCATCCAGGGTGTTCTTCCTaGGTTAATTCATCACGTCCATCAGGAACCAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: HPFKKQHPGCSS*VNSSRPSGTRN Trigger: GTTCCTGGTTCCTGATGGACGTGATGAATTAACTCAGGAAGAACACCCTGGATGCTGTTTCTTAAATGGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR GCA 72 bp | ACAAGTTCATGCAGTAGACTGTACAGAATGACTCCCTaGCCTTCCCCCACCAACCAGCTCTTATTTATACAT | + |
|
Preference number: 3 (lower is better) Translates to: TSSCSRLYRMTP*PSPTNQLLFIH Trigger: ATGTATAAATAAGAGCTGGTTGGTGGGGGAAGGGCAGGGAGTCATTCTGTACAGTCTACTGCATGAACTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR CAA 90 bp | AATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATATACCTGAAATGCTCCAGTaGTGGAGGTGCAGCCTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: NQMNKCTHAAFGNRHSDIPEMLQ*WRCSLH Trigger: GTGCAGGCTGCACCTCCACAACTGGAGCATTTCAGG...TATATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR CCA 72 bp | CTGCCCTTCCCCCACCAACCAGCTCTTATTTATACATaGACAAGAGTTGAGAATCTGATACACAAGACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LPFPHQPALIYT*TRVENLIHKTK Trigger: TTTTGTCTTGTGTATCAGATTCTCAACTCTTGTCCATGTATAAATAAGAGCTGGTTGGTGGGGGAAGGGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCCTTCCCCCACCAACCAGCTCTTATTTATACATGGACAAGAGTTGAGAATGCATGGGGTTTATTTTaGCTAAGTGAGTTTAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LPFPHQPALIYTWTRVENAWGLF*LSEFSS Trigger: AGAACTAAACTCACTTAGCAAAAATAAACCCCATGC...ATTCTCAACTCTTGTCCATGTATAAATAAGAGCTGGTTGGTGGGGGAAGGGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR TCA 72 bp | AACTGCTCTGGTCACCAGAGGCTTTTCCATGACTCCTaGTTCCTACATGTAAATAGTCTCTCATACACTTTA | + |
|
Preference number: 3 (lower is better) Translates to: NCSGHQRLFHDS*FLHVNSLSYTL Trigger: TAAAGTGTATGAGAGACTATTTACATGTAGGAATCAGGAGTCATGGAAAAGCCTCTGGTGACCAGAGCAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR CCA 72 bp | AAAGCATTGAGAAGGTACGGGAGCATCTGCTCAGCATaGGGTTTATTTTTGCTAAGTGAGTTTAGTTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: KALRRYGSICSA*GLFLLSEFSSC Trigger: ACAAGAACTAAACTCACTTAGCAAAAATAAACCCCATGCTGAGCAGATGCTCCCGTACCTTCTCAATGCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR CAA 90 bp | GTCAATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATAATGAGAGAAATGCTTaGTATTCTTGGAAGGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: VNQMNKCTHAAFGNRHSDNERNA*YSWKVS Trigger: TGAGACCTTCCAAGAATACAAAGCATTTCTCTCATT...ATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATTGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR CCA 72 bp | TTATTTTTGCTAAGTGAGTTTAGTTCTTGTTGCATCTaGGAATTTGTTGCAACAGTCTCTGAACCTGAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LFLLSEFSSCCI*EFVATVSEPES Trigger: TGACTCAGGTTCAGAGACTGTTGCAACAAATTCCCAGATGCAACAAGAACTAAACTCACTTAGCAAAAATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR CAA 90 bp | AATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATATAAAATGCTTTGTATTCTaGGAAGGTCTCATAAAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: NQMNKCTHAAFGNRHSDIKCFVF*EGLIKS Trigger: GGACTTTATGAGACCTTCCAAGAATACAAAGCATTT...TATATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR-3UTR CAA 90 bp | AATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATATAAATGAGAGAAATGCTTaGTATTCTTGGAAGGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: NQMNKCTHAAFGNRHSDINERNA*YSWKVS Trigger: TGAGACCTTCCAAGAATACAAAGCATTTCTCTCATT...TATATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR TCA 72 bp | CCACCAACCAGCTCTTATTTATACATGGACAAGAGTTaGGAATCTGATACACAAGACAAAAATCTTAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: PPTSSYLYMDKS*ESDTQDKNLKM Trigger: CATCTTAAGATTTTTGTCTTGTGTATCAGATTCTCAACTCTTGTCCATGTATAAATAAGAGCTGGTTGGTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR TCA 72 bp | GTGATTTCTTTAAGGATTCTTCGCACTTCCTTTCCATaGAATAAAGTAGACAATGCAGGTGAGTTTGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: VISLRILRTSFP*NKVDNAGEFEM Trigger: CATTTCAAACTCACCTGCATTGTCTACTTTATTTCATGGAAAGGAAGTGCGAAGAATCCTTAAAGAAATCAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR GCA 90 bp | ACAGATCTGTGGCTACCCAGGCCATCAACTCCTCAGCCCTCCAACCTGAAATGCGGCCTCTTCCAGGAATaGCTGCACAGACATGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TDLWLPRPSTPQPSNLKCGLFQE*LHRHGA Trigger: GGCACCATGTCTGTGCAGGCATTCCTGGAAGAGGCC...GCATTTCAGGTTGGAGGGCTGAGGAGTTGATGGCCTGGGTAGCCACAGATCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR TCA 90 bp | ACAGATCTGTGGCTACCCAGGCCATCAACTCCTCAGCCCTCCAACCTGAAATGCCGTAGTTGCTGGGGATaGAGCCTTCTCTCTTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: TDLWLPRPSTPQPSNLKCRSCWG*SLLSLM Trigger: CATCAAAGAGAGAAGGCTTCATCCCCAGCAACTACG...GCATTTCAGGTTGGAGGGCTGAGGAGTTGATGGCCTGGGTAGCCACAGATCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR TCA 90 bp | ACAGATCTGTGGCTACCCAGGCCATCAACTCCTCAGCCCTCCAACCTGAAATGCCAGTTTCTAAGGTGTTaGCCTTGGCCACGTAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TDLWLPRPSTPQPSNLKCQFLRC*PWPRSC Trigger: GCAACTACGTGGCCAAGGTCAACACCTTAGAAACTG...GCATTTCAGGTTGGAGGGCTGAGGAGTTGATGGCCTGGGTAGCCACAGATCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR TCA 90 bp | CTGCCCTTCCCCCACCAACCAGCTCTTATTTATACATGGACAAGAGTTGAGAATTGGGCTCCTCCTTGGTaGCCACAGCGTACAGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPFPHQPALIYTWTRVENWAPPW*PQRTAA Trigger: TGCGGCTGTACGCTGTGGTCACCAAGGAGGAGCCCA...ATTCTCAACTCTTGTCCATGTATAAATAAGAGCTGGTTGGTGGGGGAAGGGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR TCA 90 bp | TCCTCAGCCCTCCAACCTGAAATGCTCCAGTTGTGGAGGTGCAGCCTGCACAAGAATCTTGCACATGAGTaGCTCAGAGACCAGGACGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSALQPEMLQLWRCSLHKNLAHE*LRDQDV Trigger: AACGTCCTGGTCTCTGAGTCACTCATGTGCAAGATT...CTTGTGCAGGCTGCACCTCCACAACTGGAGCATTTCAGGTTGGAGGGCTGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR TCA 90 bp | AGAGCCAGTGTGCATATTAGAAAGAGAGGGTGTTTGTATTCTGACTGTGGTCCCACATGGTGCCGGGCTTaGGGGTCTTCACAGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RASVHIRKRGCLYSDCGPTWCRA*GSSQPP Trigger: AGGTGGCTGTGAAGACCCTCAAGCCCGGCACCATGT...GGGACCACAGTCAGAATACAAACACCCTCTCTTTCTAATATGCACACTGGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR TCA 90 bp | TCCTCAGCCCTCCAACCTGAAATGCTCCAGTTGTGGAGGTGCAGCCTGCACAAGCACCTTCATCACTCTTaGGGAAATCCAGCAAACTAC | + |
|
Preference number: 4 (lower is better) Translates to: SSALQPEMLQLWRCSLHKHLHHS*GNPANY Trigger: GTAGTTTGCTGGATTTCCTCAAGAGTGATGAAGGTG...CTTGTGCAGGCTGCACCTCCACAACTGGAGCATTTCAGGTTGGAGGGCTGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR GCA 90 bp | TCCTCAGCCCTCCAACCTGAAATGCTCCAGTTGTGGAGGTGCAGCCTGCACAAGTCAGGAACTGGCCTTTaGTGTTTATTGGACGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSALQPEMLQLWRCSLHKSGTGL*CLLDVG Trigger: TCCAACGTCCAATAAACAGCAAAGGCCAGTTCCTGA...CTTGTGCAGGCTGCACCTCCACAACTGGAGCATTTCAGGTTGGAGGGCTGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041377.13 |
||
| CDS-3UTR CCA 90 bp | ACAGATCTGTGGCTACCCAGGCCATCAACTCCTCAGCCCTCCAACCTGAAATGCGAAGGACAAGTCATCTaGGTGGATGCCATCATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TDLWLPRPSTPQPSNLKCEGQVI*VDAIIR Trigger: CCTTATGATGGCATCCACCCAGATGACTTGTCCTTC...GCATTTCAGGTTGGAGGGCTGAGGAGTTGATGGCCTGGGTAGCCACAGATCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR CCA 90 bp | GTACACAGTAGCATAAGTGAAAGGGGCAGACACAGCAGTTTCCAATCAGCGTTGTCCTGCACTGTTCCCTaGTGCCAGAAGCTGTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VHSSISERGRHSSFQSALSCTVP*CQKLSL Trigger: GAGCGACAGCTTCTGGCACCAGGGAACAGTGCAGGA...CAACGCTGATTGGAAACTGCTGTGTCTGCCCCTTTCACTTATGCTACTGTGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR CCA 90 bp | CTGCCCTTCCCCCACCAACCAGCTCTTATTTATACATGGACAAGAGTTGAGAATTCCTGCACTGTTCCCTaGTGCCAGAAGCTGTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPFPHQPALIYTWTRVENSCTVP*CQKLSL Trigger: GAGCGACAGCTTCTGGCACCAGGGAACAGTGCAGGA...ATTCTCAACTCTTGTCCATGTATAAATAAGAGCTGGTTGGTGGGGGAAGGGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR TCA 90 bp | TCCTCAGCCCTCCAACCTGAAATGCTCCAGTTGTGGAGGTGCAGCCTGCACAAGTCCTTGTTATGTCCTTaGAGAACCACTCTTCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSALQPEMLQLWRCSLHKSLLCP*RTTLQF Trigger: AAACTGAAGAGTGGTTCTTCAAGGACATAACAAGGA...CTTGTGCAGGCTGCACCTCCACAACTGGAGCATTTCAGGTTGGAGGGCTGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR TCA 90 bp | GTACACAGTAGCATAAGTGAAAGGGGCAGACACAGCAGTTTCCAATCAGCGTTGTCTGAGGTTTGGGACTaGTGCATGCCTTCTCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VHSSISERGRHSSFQSALSEVWD*CMPSPV Trigger: GACTGGAGAAGGCATGCATCAGTCCCAAACCTCAGA...CAACGCTGATTGGAAACTGCTGTGTCTGCCCCTTTCACTTATGCTACTGTGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR TCA 90 bp | ACAGATCTGTGGCTACCCAGGCCATCAACTCCTCAGCCCTCCAACCTGAAATGCGAATCTTCCCATAGGTaGCAATCTCATACAGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TDLWLPRPSTPQPSNLKCESSHR*QSHTGE Trigger: TTCTCCTGTATGAGATTGTCACCTATGGGAAGATTC...GCATTTCAGGTTGGAGGGCTGAGGAGTTGATGGCCTGGGTAGCCACAGATCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR GCA 90 bp | GTACACAGTAGCATAAGTGAAAGGGGCAGACACAGCAGTTTCCAATCAGCGTTGGATAAGGAAAGCTCCTaGACTGTTCCCTGGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VHSSISERGRHSSFQSALDKESS*TVPWCQ Trigger: CTGGCACCAGGGAACAGTGCAGGAGCTTTCCTTATC...CAACGCTGATTGGAAACTGCTGTGTCTGCCCCTTTCACTTATGCTACTGTGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR TCA 90 bp | TCCTCAGCCCTCCAACCTGAAATGCTCCAGTTGTGGAGGTGCAGCCTGCACAAGCTACTTCATCGTCATTaGGATTGTCTTTCCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSALQPEMLQLWRCSLHKLLHRH*DCLSFL Trigger: CAAAAAGGAAAGACAATCTCAATGACGATGAAGTAG...CTTGTGCAGGCTGCACCTCCACAACTGGAGCATTTCAGGTTGGAGGGCTGAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR GCA 90 bp | CTGCCCTTCCCCCACCAACCAGCTCTTATTTATACATGGACAAGAGTTGAGAATGATAAGGAAAGCTCCTaGACTGTTCCCTGGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPFPHQPALIYTWTRVENDKESS*TVPWCQ Trigger: CTGGCACCAGGGAACAGTGCAGGAGCTTTCCTTATC...ATTCTCAACTCTTGTCCATGTATAAATAAGAGCTGGTTGGTGGGGGAAGGGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR CCA 90 bp | GTACACAGTAGCATAAGTGAAAGGGGCAGACACAGCAGTTTCCAATCAGCGTTGTCATCACATCTGCGTTaGTTCTCCCTGGGTAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VHSSISERGRHSSFQSALSSHLR*FSLGRE Trigger: TTCCCTACCCAGGGAGAACCAACGCAGATGTGATGA...CAACGCTGATTGGAAACTGCTGTGTCTGCCCCTTTCACTTATGCTACTGTGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR CCA 90 bp | CTGCCCTTCCCCCACCAACCAGCTCTTATTTATACATGGACAAGAGTTGAGAATGTCATAGAGCTCATCTaGGCAGTTCTCCATGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPFPHQPALIYTWTRVENVIELI*AVLHAW Trigger: CCACGCATGGAGAACTGCCCAGATGAGCTCTATGAC...ATTCTCAACTCTTGTCCATGTATAAATAAGAGCTGGTTGGTGGGGGAAGGGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| 3UTR CAA 72 bp | TGTAGAGCCAGTGTGCATATTAGAAAGAGAGGGTGTTaGTATTCTGACTGTGGTCCCATTGAGCAGCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CRASVHIRKRGC*YSDCGPIEQRP Trigger: TGGCCGCTGCTCAATGGGACCACAGTCAGAATACAAACACCCTCTCTTTCTAATATGCACACTGGCTCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR TCA 90 bp | CTGCCCTTCCCCCACCAACCAGCTCTTATTTATACATGGACAAGAGTTGAGAATCAGTTTCTAAGGTGTTaGCCTTGGCCACGTAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPFPHQPALIYTWTRVENQFLRC*PWPRSC Trigger: GCAACTACGTGGCCAAGGTCAACACCTTAGAAACTG...ATTCTCAACTCTTGTCCATGTATAAATAAGAGCTGGTTGGTGGGGGAAGGGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR TCA 90 bp | GTCAATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATACATGGTGCCGGGCTTaGGGGTCTTCACAGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: VNQMNKCTHAAFGNRHSDTWCRA*GSSQPP Trigger: AGGTGGCTGTGAAGACCCTCAAGCCCGGCACCATGT...ATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGCCCTCCAACCTGAAATGCTCCAGTTGTGGAGGTGCAGCCTGCACAAGCTGTTTATTGGACGTTaGATCTCTCACATAAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSALQPEMLQLWRCSLHKLFIGR*ISHINS Trigger: ACTATTTATGTGAGAGATCCAACGTCCAATAAACAG...CTTGTGCAGGCTGCACCTCCACAACTGGAGCATTTCAGGTTGGAGGGCTGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041377.13 |
||
| CDS-3UTR TCA 90 bp | AATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATATATGGGCTCCTCCTTGGTaGCCACAGCGTACAGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: NQMNKCTHAAFGNRHSDIWAPPW*PQRTAA Trigger: TGCGGCTGTACGCTGTGGTCACCAAGGAGGAGCCCA...TATATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR TCA 90 bp | GTACACAGTAGCATAAGTGAAAGGGGCAGACACAGCAGTTTCCAATCAGCGTTGCACCTTCATCACTCTTaGGGAAATCCAGCAAACTAC | + |
|
Preference number: 4 (lower is better) Translates to: VHSSISERGRHSSFQSALHLHHS*GNPANY Trigger: GTAGTTTGCTGGATTTCCTCAAGAGTGATGAAGGTG...CAACGCTGATTGGAAACTGCTGTGTCTGCCCCTTTCACTTATGCTACTGTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR TCA 90 bp | CTGCCCTTCCCCCACCAACCAGCTCTTATTTATACATGGACAAGAGTTGAGAATAATCTTGCACATGAGTaGCTCAGAGACCAGGACGTT | + |
|
Preference number: 4 (lower is better) Translates to: LPFPHQPALIYTWTRVENNLAHE*LRDQDV Trigger: AACGTCCTGGTCTCTGAGTCACTCATGTGCAAGATT...ATTCTCAACTCTTGTCCATGTATAAATAAGAGCTGGTTGGTGGGGGAAGGGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR TCA 90 bp | GTACACAGTAGCATAAGTGAAAGGGGCAGACACAGCAGTTTCCAATCAGCGTTGGAATCTTCCCATAGGTaGCAATCTCATACAGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VHSSISERGRHSSFQSALESSHR*QSHTGE Trigger: TTCTCCTGTATGAGATTGTCACCTATGGGAAGATTC...CAACGCTGATTGGAAACTGCTGTGTCTGCCCCTTTCACTTATGCTACTGTGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR GCA 90 bp | AGAGCCAGTGTGCATATTAGAAAGAGAGGGTGTTTGTATTCTGACTGTGGTCCCCAGAAGCTGTCGCTCTaGATCTTTCCTTGTTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: RASVHIRKRGCLYSDCGPQKLSL*IFPCYV Trigger: GACATAACAAGGAAAGATGCAGAGCGACAGCTTCTG...GGGACCACAGTCAGAATACAAACACCCTCTCTTTCTAATATGCACACTGGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR CCA 90 bp | CTGCCCTTCCCCCACCAACCAGCTCTTATTTATACATGGACAAGAGTTGAGAATGATACTGCCCTTCTGTaGCTGTATAGAAGTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPFPHQPALIYTWTRVENDTALL*LYRSHP Trigger: TGGATGACTTCTATACAGCCACAGAAGGGCAGTATC...ATTCTCAACTCTTGTCCATGTATAAATAAGAGCTGGTTGGTGGGGGAAGGGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR TCA 90 bp | GTACACAGTAGCATAAGTGAAAGGGGCAGACACAGCAGTTTCCAATCAGCGTTGGTATTACGTACTGGTTaGGTCTTCGAATCTACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VHSSISERGRHSSFQSALVLRTG*VFESTS Trigger: TGAAGTAGATTCGAAGACTCAACCAGTACGTAATAC...CAACGCTGATTGGAAACTGCTGTGTCTGCCCCTTTCACTTATGCTACTGTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041377.13 |
||
| CDS-3UTR TCA 90 bp | AGAGCCAGTGTGCATATTAGAAAGAGAGGGTGTTTGTATTCTGACTGTGGTCCCTGTCCTGGTAAAAGATaGAATTCAGGAACTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RASVHIRKRGCLYSDCGPCPGKR*NSGTGL Trigger: AAGGCCAGTTCCTGAATTTCATCTTTTACCAGGACA...GGGACCACAGTCAGAATACAAACACCCTCTCTTTCTAATATGCACACTGGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041377.13 |
||
| CDS-3UTR TCA 90 bp | GTCAATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATTCTGAGGTTTGGGACTaGTGCATGCCTTCTCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VNQMNKCTHAAFGNRHSDSEVWD*CMPSPV Trigger: GACTGGAGAAGGCATGCATCAGTCCCAAACCTCAGA...ATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR GCA 90 bp | AATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATATAGGCCTCTTCCAGGAATaGCTGCACAGACATGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NQMNKCTHAAFGNRHSDIGLFQE*LHRHGA Trigger: GGCACCATGTCTGTGCAGGCATTCCTGGAAGAGGCC...TATATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR GCA 90 bp | AGAGCCAGTGTGCATATTAGAAAGAGAGGGTGTTTGTATTCTGACTGTGGTCCCACTAGCTTGTCATGTTaGAAGGTCTTCATGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RASVHIRKRGCLYSDCGPTSLSC*KVFMRL Trigger: CAACCTCATGAAGACCTTGCAACATGACAAGCTAGT...GGGACCACAGTCAGAATACAAACACCCTCTCTTTCTAATATGCACACTGGCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR GCA 90 bp | CTGCCCTTCCCCCACCAACCAGCTCTTATTTATACATGGACAAGAGTTGAGAATACTAGCTTGTCATGTTaGAAGGTCTTCATGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LPFPHQPALIYTWTRVENTSLSC*KVFMRL Trigger: CAACCTCATGAAGACCTTGCAACATGACAAGCTAGT...ATTCTCAACTCTTGTCCATGTATAAATAAGAGCTGGTTGGTGGGGGAAGGGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR CCA 90 bp | GTACACAGTAGCATAAGTGAAAGGGGCAGACACAGCAGTTTCCAATCAGCGTTGGTCAGTATTACGTACTaGTTGAGTCTTCGAATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: VHSSISERGRHSSFQSALVSITY*LSLRIY Trigger: GTAGATTCGAAGACTCAACCAGTACGTAATACTGAC...CAACGCTGATTGGAAACTGCTGTGTCTGCCCCTTTCACTTATGCTACTGTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041377.13 |
||
| 3UTR CAA 72 bp | AGGTACGGGAGCATCTGCTCAGCATGGGGTTTATTTTaGCTAAGTGAGTTTAGTTCTTGTTGCATCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RYGSICSAWGLF*LSEFSSCCIWE Trigger: TTCCCAGATGCAACAAGAACTAAACTCACTTAGCAAAAATAAACCCCATGCTGAGCAGATGCTCCCGTACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR CCA 90 bp | GTACACAGTAGCATAAGTGAAAGGGGCAGACACAGCAGTTTCCAATCAGCGTTGGTCACCTTGTTCCTCTaGATCTTTTGTTTGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: VHSSISERGRHSSFQSALVTLFL*IFCLKS Trigger: AGATTTCAAACAAAAGATCCAGAGGAACAAGGTGAC...CAACGCTGATTGGAAACTGCTGTGTCTGCCCCTTTCACTTATGCTACTGTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR CCA 90 bp | GTCAATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATGGCATCTTTATCCCATaGCTTCTGAGGTTTGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: VNQMNKCTHAAFGNRHSDGIFIP*LLRFGT Trigger: AGTCCCAAACCTCAGAAGCCATGGGATAAAGATGCC...ATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR CCA 90 bp | AATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATATAGTCATAGAGCTCATCTaGGCAGTTCTCCATGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NQMNKCTHAAFGNRHSDIVIELI*AVLHAW Trigger: CCACGCATGGAGAACTGCCCAGATGAGCTCTATGAC...TATATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR GCA 90 bp | GTCAATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATCAGAAGCTGTCGCTCTaGATCTTTCCTTGTTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: VNQMNKCTHAAFGNRHSDQKLSL*IFPCYV Trigger: GACATAACAAGGAAAGATGCAGAGCGACAGCTTCTG...ATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATTGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR CCA 90 bp | AATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATATATCATCACATCTGCGTTaGTTCTCCCTGGGTAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NQMNKCTHAAFGNRHSDISSHLR*FSLGRE Trigger: TTCCCTACCCAGGGAGAACCAACGCAGATGTGATGA...TATATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR GCA 90 bp | GTCAATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATTTCCACCATTCCCCATaGTCTTCTAGAACTTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: VNQMNKCTHAAFGNRHSDFHHSP*SSRTFI Trigger: GATGAAAGTTCTAGAAGAGCATGGGGAATGGTGGAA...ATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR CCA 90 bp | AATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATATAGAAGGACAAGTCATCTaGGTGGATGCCATCATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NQMNKCTHAAFGNRHSDIEGQVI*VDAIIR Trigger: CCTTATGATGGCATCCACCCAGATGACTTGTCCTTC...TATATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR CCA 90 bp | AATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATATAGATACTGCCCTTCTGTaGCTGTATAGAAGTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: NQMNKCTHAAFGNRHSDIDTALL*LYRSHP Trigger: TGGATGACTTCTATACAGCCACAGAAGGGCAGTATC...TATATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR GCA 90 bp | AATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATATATTCCACCATTCCCCATaGTCTTCTAGAACTTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: NQMNKCTHAAFGNRHSDIFHHSP*SSRTFI Trigger: GATGAAAGTTCTAGAAGAGCATGGGGAATGGTGGAA...TATATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR CCA 90 bp | GTCAATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATATGAAATTCAGGAACTaGCCTTTGCTGTTTATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VNQMNKCTHAAFGNRHSDMKFRN*PLLFIG Trigger: TCCAATAAACAGCAAAGGCCAGTTCCTGAATTTCAT...ATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATTGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041377.13 |
||
| CDS-3UTR TCA 90 bp | AATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATATATCCTTGTTATGTCCTTaGAGAACCACTCTTCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NQMNKCTHAAFGNRHSDISLLCP*RTTLQF Trigger: AAACTGAAGAGTGGTTCTTCAAGGACATAACAAGGA...TATATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR TCA 90 bp | AATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATATACTACTTCATCGTCATTaGGATTGTCTTTCCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NQMNKCTHAAFGNRHSDILLHRH*DCLSFL Trigger: CAAAAAGGAAAGACAATCTCAATGACGATGAAGTAG...TATATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR CCA 90 bp | AATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATATAGTCACCTTGTTCCTCTaGATCTTTTGTTTGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: NQMNKCTHAAFGNRHSDIVTLFL*IFCLKS Trigger: AGATTTCAAACAAAAGATCCAGAGGAACAAGGTGAC...TATATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR CAA 90 bp | TCCTCAGCCCTCCAACCTGAAATGCTCCAGTTGTGGAGGTGCAGCCTGCACAAGGACCACACGTCAGATTaGATAGTGAAGCAGCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSALQPEMLQLWRCSLHKDHTSD*IVKQPK Trigger: CTTCGGCTGCTTCACTATCAAATCTGACGTGTGGTC...CTTGTGCAGGCTGCACCTCCACAACTGGAGCATTTCAGGTTGGAGGGCTGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR CAA 90 bp | TCCTCAGCCCTCCAACCTGAAATGCTCCAGTTGTGGAGGTGCAGCCTGCACAAGGGCCTTTGCTGTTTATaGGACGTTGGATCTCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: SSALQPEMLQLWRCSLHKGLCCL*DVGSLT Trigger: TGTGAGAGATCCAACGTCCAATAAACAGCAAAGGCC...CTTGTGCAGGCTGCACCTCCACAACTGGAGCATTTCAGGTTGGAGGGCTGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041377.13 |
||
| CDS-3UTR CAA 90 bp | ACAGATCTGTGGCTACCCAGGCCATCAACTCCTCAGCCCTCCAACCTGAAATGCGTAAGTAGTCAAAAGTaGGCCTCTCCTCTGCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TDLWLPRPSTPQPSNLKCVSSQK*ASPLPF Trigger: AAAAGGCAGAGGAGAGGCCAACTTTTGACTACTTAC...GCATTTCAGGTTGGAGGGCTGAGGAGTTGATGGCCTGGGTAGCCACAGATCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR CAA 90 bp | GTCAATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATGTGAAGCAGCCGAAGTaGATGGCCTCTGGAGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VNQMNKCTHAAFGNRHSDVKQPK*MASGAV Trigger: GACAGCTCCAGAGGCCATCAACTTCGGCTGCTTCAC...ATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR CAA 90 bp | GTACACAGTAGCATAAGTGAAAGGGGCAGACACAGCAGTTTCCAATCAGCGTTGAGTATTACGTACTGGTaGAGTCTTCGAATCTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: VHSSISERGRHSSFQSALSITYW*SLRIYF Trigger: GAAGTAGATTCGAAGACTCAACCAGTACGTAATACT...CAACGCTGATTGGAAACTGCTGTGTCTGCCCCTTTCACTTATGCTACTGTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041377.13 |
||
| CDS-3UTR CAA 90 bp | CTGCCCTTCCCCCACCAACCAGCTCTTATTTATACATGGACAAGAGTTGAGAATGTTCCTCTGGATCTTTaGTTTGAAATCTCTGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPFPHQPALIYTWTRVENVPLDL*FEISVL Trigger: CAGGACAGAGATTTCAAACAAAAGATCCAGAGGAAC...ATTCTCAACTCTTGTCCATGTATAAATAAGAGCTGGTTGGTGGGGGAAGGGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR CAA 90 bp | AGAGCCAGTGTGCATATTAGAAAGAGAGGGTGTTTGTATTCTGACTGTGGTCCCGTTCCTCTGGATCTTTaGTTTGAAATCTCTGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RASVHIRKRGCLYSDCGPVPLDL*FEISVL Trigger: CAGGACAGAGATTTCAAACAAAAGATCCAGAGGAAC...GGGACCACAGTCAGAATACAAACACCCTCTCTTTCTAATATGCACACTGGCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR CAA 90 bp | CTGCCCTTCCCCCACCAACCAGCTCTTATTTATACATGGACAAGAGTTGAGAATATCTTTTCTCCTTTCTaGAAGGACAAGTCATCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LPFPHQPALIYTWTRVENIFSPF*KDKSSG Trigger: CCCAGATGACTTGTCCTTCAAGAAAGGAGAAAAGAT...ATTCTCAACTCTTGTCCATGTATAAATAAGAGCTGGTTGGTGGGGGAAGGGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR CAA 90 bp | GTCAATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATTTCAGGAACTGGCCTTaGCTGTTTATTGGACGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VNQMNKCTHAAFGNRHSDFRNWP*LFIGRW Trigger: CCAACGTCCAATAAACAGCAAAGGCCAGTTCCTGAA...ATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041377.13 |
||
| CDS-3UTR CAA 90 bp | AATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATATAGACCACACGTCAGATTaGATAGTGAAGCAGCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NQMNKCTHAAFGNRHSDIDHTSD*IVKQPK Trigger: CTTCGGCTGCTTCACTATCAAATCTGACGTGTGGTC...TATATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR CAA 90 bp | GTCAATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATGTAAGTAGTCAAAAGTaGGCCTCTCCTCTGCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VNQMNKCTHAAFGNRHSDVSSQK*ASPLPF Trigger: AAAAGGCAGAGGAGAGGCCAACTTTTGACTACTTAC...ATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS-3UTR CAA 90 bp | GTCAATCAAATGAATAAATGTACACATGCTGCGTTTGGAAATAGGCACTCGGATATCTTTTCTCCTTTCTaGAAGGACAAGTCATCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VNQMNKCTHAAFGNRHSDIFSPF*KDKSSG Trigger: CCCAGATGACTTGTCCTTCAAGAAAGGAGAAAAGAT...ATCCGAGTGCCTATTTCCAAACGCAGCATGTGTACATTTATTCATTTGATTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS TCA 72 bp | TGGGCAGTTCTCCATGCGTGGCATTCGATATCCCTGTaGCAGTGCGCTCATCACATCTGCGTTGGTTCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: WAVLHAWHSISL*QCAHHICVGSP Trigger: GGGAGAACCAACGCAGATGTGATGAGCGCACTGTCACAGGGATATCGAATGCCACGCATGGAGAACTGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS CAA 90 bp | CCTGGTGCCAGAAGCTGTCGCTCTGCATCTTTCCTTGTTATGTCCTaGAAGAACCACTCTTCAGTTTCTAAGGTGTTGACCTTGGCCACG | + |
|
Preference number: 6 (lower is better) Translates to: PGARSCRSASFLVMS*KNHSSVSKVLTLAT Trigger: CGTGGCCAAGGTCAACACCTTAGAAACTGAAGAGTGGTTCTTCAAGGACATAACAAGGAAAGATGCAGAGCGACAGCTTCTGGCACCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS TCA 72 bp | AGGCATCTTTATCCCATGGCTTCTGAGGTTTGGGACTaGTGCATGCCTTCTCCAGTCTTCTGCATAGACCAT | + |
|
Preference number: 6 (lower is better) Translates to: RHLYPMASEVWD*CMPSPVFCIDH Trigger: ATGGTCTATGCAGAAGACTGGAGAAGGCATGCATCAGTCCCAAACCTCAGAAGCCATGGGATAAAGATGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS CAA 72 bp | AGAAGCTGTCGCTCTGCATCTTTCCTTGTTATGTCCTaGAAGAACCACTCTTCAGTTTCTAAGGTGTTGACC | + |
|
Preference number: 6 (lower is better) Translates to: RSCRSASFLVMS*KNHSSVSKVLT Trigger: GGTCAACACCTTAGAAACTGAAGAGTGGTTCTTCAAGGACATAACAAGGAAAGATGCAGAGCGACAGCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041377.13 ENSMUST00000103010.4 |
||
| CDS CCA 72 bp | AAATTCAGGAACTGGCCTTTGCTGTTTATTGGACGTTaGATCTCTCACATAAATAGTTCGGTCAGTATTACG | + |
|
Preference number: 6 (lower is better) Translates to: KFRNWPLLFIGR*ISHINSSVSIT Trigger: CGTAATACTGACCGAACTATTTATGTGAGAGATCCAACGTCCAATAAACAGCAAAGGCCAGTTCCTGAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041377.13 |
||
| CDS CCA 72 bp | ATCTCTCACATAAATAGTTCGGTCAGTATTACGTACTaGTTGAGTCTTCGAATCTACTTCATCGTCATTGAG | + |
|
Preference number: 6 (lower is better) Translates to: ISHINSSVSITY*LSLRIYFIVIE Trigger: CTCAATGACGATGAAGTAGATTCGAAGACTCAACCAGTACGTAATACTGACCGAACTATTTATGTGAGAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041377.13 |
||
| CDS CAA 72 bp | TCTCACATAAATAGTTCGGTCAGTATTACGTACTGGTaGAGTCTTCGAATCTACTTCATCGTCATTGAGATT | + |
|
Preference number: 6 (lower is better) Translates to: SHINSSVSITYW*SLRIYFIVIEI Trigger: AATCTCAATGACGATGAAGTAGATTCGAAGACTCAACCAGTACGTAATACTGACCGAACTATTTATGTGAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041377.13 |
||