Pregenerated sensors for LYL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034041Ensembl transcript IDs: ENSMUST00000037165.6, ENSMUST00000238338.2, ENSMUST00000238562.2
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGCGCGGAGGCTTCCAGACCCTTCCCTACCTCCCTCAGGACCTCTaGGATCCCATGGCTACTTGGCCTTGTCGATTCTCTGGCCTCGGC | + |
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Preference number: 1 (lower is better) Translates to: KRGGFQTLPYLPQDL*DPMATWPCRFSGLG Trigger: GCCGAGGCCAGAGAATCGACAAGGCCAAGTAGCCATGGGATCCCAGAGGTCCTGAGGGAGGTAGGGAAGGGTCTGGAAGCCTCCGCGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| 3UTR CCA 90 bp | ACCCTTCCCTACCTCCCTCAGGACCTCTGGGATCCCATGGCTACTTaGCCTTGTCGATTCTCTGGCCTCGGCCCTGGCAAGAGGACACTG | + |
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Preference number: 1 (lower is better) Translates to: TLPYLPQDLWDPMAT*PCRFSGLGPGKRTL Trigger: CAGTGTCCTCTTGCCAGGGCCGAGGCCAGAGAATCGACAAGGCCAAGTAGCCATGGGATCCCAGAGGTCCTGAGGGAGGTAGGGAAGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| 3UTR CCA 90 bp | GCTTCCAGACCCTTCCCTACCTCCCTCAGGACCTCTGGGATCCCATaGCTACTTGGCCTTGTCGATTCTCTGGCCTCGGCCCTGGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: ASRPFPTSLRTSGIP*LLGLVDSLASALAR Trigger: TCTTGCCAGGGCCGAGGCCAGAGAATCGACAAGGCCAAGTAGCCATGGGATCCCAGAGGTCCTGAGGGAGGTAGGGAAGGGTCTGGAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| 3UTR CAA 90 bp | CAAGCGCAACCAGTTGGGCTTCATGGGGTAGGTCCTCCCACACACTaGTCTAGGGTCTTCCCGCCTCCAGCAGGGGGCGCCGATGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: QAQPVGLHGVGPPTH*SRVFPPPAGGADEK Trigger: CTTCTCATCGGCGCCCCCTGCTGGAGGCGGGAAGACCCTAGACAAGTGTGTGGGAGGACCTACCCCATGAAGCCCAACTGGTTGCGCTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| 3UTR CAA 90 bp | GACCCTTCCCTACCTCCCTCAGGACCTCTGGGATCCCATGGCTACTaGGCCTTGTCGATTCTCTGGCCTCGGCCCTGGCAAGAGGACACT | + |
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Preference number: 2 (lower is better) Translates to: DPSLPPSGPLGSHGY*ALSILWPRPWQEDT Trigger: AGTGTCCTCTTGCCAGGGCCGAGGCCAGAGAATCGACAAGGCCAAGTAGCCATGGGATCCCAGAGGTCCTGAGGGAGGTAGGGAAGGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| 3UTR CAA 90 bp | TCCCTACCTCCCTCAGGACCTCTGGGATCCCATGGCTACTTGGCCTaGTCGATTCTCTGGCCTCGGCCCTGGCAAGAGGACACTGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: SLPPSGPLGSHGYLA*SILWPRPWQEDTGK Trigger: TTTGCCAGTGTCCTCTTGCCAGGGCCGAGGCCAGAGAATCGACAAGGCCAAGTAGCCATGGGATCCCAGAGGTCCTGAGGGAGGTAGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| 3UTR-3UTR TCA 90 bp | TCGATTCTCTGGCCTCGGCCCTGGCAAGAGGACACTGGCAAAGCCACTGCAAGTTTACAGGGAGTTCACTaGACAGCAGGTGAGGCGCCT | + |
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Preference number: 2 (lower is better) Translates to: SILWPRPWQEDTGKATASLQGVH*TAGEAP Trigger: AGGCGCCTCACCTGCTGTTCAGTGAACTCCCTGTAA...ACTTGCAGTGGCTTTGCCAGTGTCCTCTTGCCAGGGCCGAGGCCAGAGAATCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCAGGACCTCTGGGATCCCATGGCTACTTGGCCTTGTCGATTCTCTGGCCTCTTACAGGGAGTTCACTaGACAGCAGGTGAGGCGCCT | + |
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Preference number: 2 (lower is better) Translates to: PQDLWDPMATWPCRFSGLLQGVH*TAGEAP Trigger: AGGCGCCTCACCTGCTGTTCAGTGAACTCCCTGTAA...GAGGCCAGAGAATCGACAAGGCCAAGTAGCCATGGGATCCCAGAGGTCCTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCAGGACCTCTGGGATCCCATGGCTACTTGGCCTTGTCGATTCTCTGGCCTCACTGCAAGTAGCCTGTaGGAGATTTTTCTTAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: PQDLWDPMATWPCRFSGLTASSL*EIFLKS Trigger: ACTTTTAAGAAAAATCTCCCACAGGCTACTTGCAGT...GAGGCCAGAGAATCGACAAGGCCAAGTAGCCATGGGATCCCAGAGGTCCTGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTCAGGACCTCTGGGATCCCATGGCTACTTGGCCTTGTCGATTCTCTGGCCTACTGCAAGTAGCCTGTaGGAGATTTTTCTTAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: PSGPLGSHGYLALSILWPTASSL*EIFLKS Trigger: ACTTTTAAGAAAAATCTCCCACAGGCTACTTGCAGT...AGGCCAGAGAATCGACAAGGCCAAGTAGCCATGGGATCCCAGAGGTCCTGAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| 3UTR CCA 72 bp | TACCTCCCTCAGGACCTCTGGGATCCCATGGCTACTTaGCCTTGTCGATTCTCTGGCCTCGGCCCTGGCAAG | + |
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Preference number: 3 (lower is better) Translates to: YLPQDLWDPMAT*PCRFSGLGPGK Trigger: CTTGCCAGGGCCGAGGCCAGAGAATCGACAAGGCCAAGTAGCCATGGGATCCCAGAGGTCCTGAGGGAGGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| 3UTR CCA 72 bp | GGCTTCCAGACCCTTCCCTACCTCCCTCAGGACCTCTaGGATCCCATGGCTACTTGGCCTTGTCGATTCTCT | + |
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Preference number: 3 (lower is better) Translates to: GFQTLPYLPQDL*DPMATWPCRFS Trigger: AGAGAATCGACAAGGCCAAGTAGCCATGGGATCCCAGAGGTCCTGAGGGAGGTAGGGAAGGGTCTGGAAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| 3UTR CCA 72 bp | CTGCAAGTAGCCTGTGGGAGATTTTTCTTAAAAGTCTaGGGATCCCTGGCGTCGCCGGTCACCCTTCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: LQVACGRFFLKV*GSLASPVTLPE Trigger: CTCTGGAAGGGTGACCGGCGACGCCAGGGATCCCCAGACTTTTAAGAAAAATCTCCCACAGGCTACTTGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| 3UTR GCA 72 bp | CCCACCCCAGTCACTGCGCTTCTGTTATACCATCTTTaGCTGACTCTCTTCGGCTTCTCCATTGAATGGCTA | + |
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Preference number: 3 (lower is better) Translates to: PTPVTALLLYHL*LTLFGFSIEWL Trigger: TAGCCATTCAATGGAGAAGCCGAAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACTGGGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238562.2 |
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| CDS-3UTR GCA 90 bp | GTCCTCCCACACACTTGTCTAGGGTCTTCCCGCCTCCAGCAGGGGGCGCCGATGGCGCCGTTAACGTGCTaGTGCCGCCAGCGCTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: VLPHTCLGSSRLQQGAPMAPLTC*CRQRSR Trigger: CCGTGAGCGCTGGCGGCAGCAGCACGTTAACGGCGC...CATCGGCGCCCCCTGCTGGAGGCGGGAAGACCCTAGACAAGTGTGTGGGAGGAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS-3UTR CCA 90 bp | GGCCTTGTCGATTCTCTGGCCTCGGCCCTGGCAAGAGGACACTGGCAAAGCCACTTCCGGTCGGGCGGGTaGGTGGGCAGCAGCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: GLVDSLASALARGHWQSHFRSGG*VGSSFL Trigger: CAGGAAGCTGCTGCCCACCCACCCGCCCGACCGGAA...GTGGCTTTGCCAGTGTCCTCTTGCCAGGGCCGAGGCCAGAGAATCGACAAGGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS-3UTR CCA 90 bp | CCTCAGGACCTCTGGGATCCCATGGCTACTTGGCCTTGTCGATTCTCTGGCCTCGGGACCCGGGAGCGCTaGGGCCGGAGGTCAGCACAG | + |
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Preference number: 4 (lower is better) Translates to: PQDLWDPMATWPCRFSGLGTRER*GRRSAQ Trigger: CTGTGCTGACCTCCGGCCCCAGCGCTCCCGGGTCCC...GAGGCCAGAGAATCGACAAGGCCAAGTAGCCATGGGATCCCAGAGGTCCTGAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS-3UTR TCA 90 bp | GGCCTTGTCGATTCTCTGGCCTCGGCCCTGGCAAGAGGACACTGGCAAAGCCACTGGGCAGCAGCTTCCTaGGCTCTGCGAAGGCGCCGT | + |
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Preference number: 4 (lower is better) Translates to: GLVDSLASALARGHWQSHWAAAS*ALRRRR Trigger: ACGGCGCCTTCGCAGAGCTCAGGAAGCTGCTGCCCA...GTGGCTTTGCCAGTGTCCTCTTGCCAGGGCCGAGGCCAGAGAATCGACAAGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS-3UTR GCA 90 bp | ACTTGGCCTTGTCGATTCTCTGGCCTCGGCCCTGGCAAGAGGACACTGGCAAAGCCGTTAACGTGCTGCTaGCGCCAGCGCTCACGGCTG | + |
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Preference number: 4 (lower is better) Translates to: TWPCRFSGLGPGKRTLAKPLTCC*RQRSRL Trigger: CAGCCGTGAGCGCTGGCGGCAGCAGCACGTTAACGG...CTTTGCCAGTGTCCTCTTGCCAGGGCCGAGGCCAGAGAATCGACAAGGCCAAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS-3UTR GCA 90 bp | TACTTGGCCTTGTCGATTCTCTGGCCTCGGCCCTGGCAAGAGGACACTGGCAAAGCGCCGTTAACGTGCTaGTGCCGCCAGCGCTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: YLALSILWPRPWQEDTGKAPLTC*CRQRSR Trigger: CCGTGAGCGCTGGCGGCAGCAGCACGTTAACGGCGC...TTTGCCAGTGTCCTCTTGCCAGGGCCGAGGCCAGAGAATCGACAAGGCCAAGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| 3UTR CAA 72 bp | CCCTCAGGACCTCTGGGATCCCATGGCTACTTGGCCTaGTCGATTCTCTGGCCTCGGCCCTGGCAAGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PSGPLGSHGYLA*SILWPRPWQED Trigger: GTCCTCTTGCCAGGGCCGAGGCCAGAGAATCGACAAGGCCAAGTAGCCATGGGATCCCAGAGGTCCTGAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS-3UTR TCA 90 bp | GTCCTCCCACACACTTGTCTAGGGTCTTCCCGCCTCCAGCAGGGGGCGCCGATGCAATGTAGACACTGTTaGGGAAGGGGTGAGGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: VLPHTCLGSSRLQQGAPMQCRHC*GRGEGG Trigger: ACCACCCTCACCCCTTCCTCAACAGTGTCTACATTG...CATCGGCGCCCCCTGCTGGAGGCGGGAAGACCCTAGACAAGTGTGTGGGAGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS-3UTR TCA 90 bp | ATGGCTACTTGGCCTTGTCGATTCTCTGGCCTCGGCCCTGGCAAGAGGACACTGGCTCACGGCTGTTGGTaGACACTCGCCGAGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: MATWPCRFSGLGPGKRTLAHGCW*TLAEPP Trigger: AGGTGGCTCGGCGAGTGTTCACCAACAGCCGTGAGC...CAGTGTCCTCTTGCCAGGGCCGAGGCCAGAGAATCGACAAGGCCAAGTAGCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS-3UTR GCA 90 bp | TCCCTCAGGACCTCTGGGATCCCATGGCTACTTGGCCTTGTCGATTCTCTGGCCTGTGGTGGGCATGGCTaGCCCTATGGGCCTGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: SLRTSGIPWLLGLVDSLACGGHG*PYGPGV Trigger: CACACCAGGCCCATAGGGGCAGCCATGCCCACCACA...GGCCAGAGAATCGACAAGGCCAAGTAGCCATGGGATCCCAGAGGTCCTGAGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037165.6 |
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| CDS-3UTR GCA 90 bp | TGTCGATTCTCTGGCCTCGGCCCTGGCAAGAGGACACTGGCAAAGCCACTGCAAGCAGCACCTCGTTCTTaGTCAGCTTCCGGTCGGGCG | + |
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Preference number: 4 (lower is better) Translates to: CRFSGLGPGKRTLAKPLQAAPRS*SASGRA Trigger: CGCCCGACCGGAAGCTGAGCAAGAACGAGGTGCTGC...TTGCAGTGGCTTTGCCAGTGTCCTCTTGCCAGGGCCGAGGCCAGAGAATCGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| 3UTR CAA 72 bp | CTACCTCCCTCAGGACCTCTGGGATCCCATGGCTACTaGGCCTTGTCGATTCTCTGGCCTCGGCCCTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: LPPSGPLGSHGY*ALSILWPRPWQ Trigger: TTGCCAGGGCCGAGGCCAGAGAATCGACAAGGCCAAGTAGCCATGGGATCCCAGAGGTCCTGAGGGAGGTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS-3UTR CCA 90 bp | CTCCCTCAGGACCTCTGGGATCCCATGGCTACTTGGCCTTGTCGATTCTCTGGCGGGCAGGTGCTGGGCTaGAGGCACATACCATCTCAG | + |
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Preference number: 4 (lower is better) Translates to: LPQDLWDPMATWPCRFSGGQVLG*RHIPSQ Trigger: CTGAGATGGTATGTGCCTCCAGCCCAGCACCTGCCC...GCCAGAGAATCGACAAGGCCAAGTAGCCATGGGATCCCAGAGGTCCTGAGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037165.6 |
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| CDS-3UTR CCA 90 bp | TACTTGGCCTTGTCGATTCTCTGGCCTCGGCCCTGGCAAGAGGACACTGGCAAAGGGAGGGGCAGGTGCTaGGCTGGAGGCACATACCAT | + |
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Preference number: 4 (lower is better) Translates to: YLALSILWPRPWQEDTGKGRGRC*AGGTYH Trigger: ATGGTATGTGCCTCCAGCCCAGCACCTGCCCCTCCC...TTTGCCAGTGTCCTCTTGCCAGGGCCGAGGCCAGAGAATCGACAAGGCCAAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037165.6 |
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| CDS-3UTR TCA 90 bp | CCTGGCAAGAGGACACTGGCAAAGCCACTGCAAGTAGCCTGTGGGAGATTTTTCAGAAAGGGGCCCAGGTaGGGCCGGCTTAGAGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: PGKRTLAKPLQVACGRFFRKGPR*GRLRGR Trigger: CCTCCCTCTAAGCCGGCCTCACCTGGGCCCCTTTCT...GAAAAATCTCCCACAGGCTACTTGCAGTGGCTTTGCCAGTGTCCTCTTGCCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037165.6 |
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| CDS-3UTR GCA 90 bp | ATGGCTACTTGGCCTTGTCGATTCTCTGGCCTCGGCCCTGGCAAGAGGACACTGCCCAAGGCAGTTAGCTaGAGCAAGGAGGGCCGAAAG | + |
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Preference number: 4 (lower is better) Translates to: MATWPCRFSGLGPGKRTLPKAVS*SKEGRK Trigger: CTTTCGGCCCTCCTTGCTGCAGCTAACTGCCTTGGG...CAGTGTCCTCTTGCCAGGGCCGAGGCCAGAGAATCGACAAGGCCAAGTAGCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS-3UTR GCA 90 bp | CCTGGCAAGAGGACACTGGCAAAGCCACTGCAAGTAGCCTGTGGGAGATTTTTCCCGTTAACGTGCTGCTaGCGCCAGCGCTCACGGCTG | + |
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Preference number: 4 (lower is better) Translates to: PGKRTLAKPLQVACGRFFPLTCC*RQRSRL Trigger: CAGCCGTGAGCGCTGGCGGCAGCAGCACGTTAACGG...GAAAAATCTCCCACAGGCTACTTGCAGTGGCTTTGCCAGTGTCCTCTTGCCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS-3UTR GCA 90 bp | TGTCGATTCTCTGGCCTCGGCCCTGGCAAGAGGACACTGGCAAAGCCACTGCAACAGCTTCCTGAGCTCTaGGAAGGCGCCGTTAACGTG | + |
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Preference number: 4 (lower is better) Translates to: CRFSGLGPGKRTLAKPLQQLPEL*EGAVNV Trigger: CACGTTAACGGCGCCTTCGCAGAGCTCAGGAAGCTG...TTGCAGTGGCTTTGCCAGTGTCCTCTTGCCAGGGCCGAGGCCAGAGAATCGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS-3UTR CCA 90 bp | GGCCTTGTCGATTCTCTGGCCTCGGCCCTGGCAAGAGGACACTGGCAAAGCCACCAGTTTTCTCAGTCATaGCGGAACCCACCTCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: GLVDSLASALARGHWQSHQFSQS*RNPPLL Trigger: GAGCAGAGGTGGGTTCCGCCATGACTGAGAAAACTG...GTGGCTTTGCCAGTGTCCTCTTGCCAGGGCCGAGGCCAGAGAATCGACAAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037165.6 |
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| CDS-3UTR CCA 90 bp | AGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTTCGGCTTCTCCATGGGACCCGGGAGCGCTaGGGCCGGAGGTCAGCACAG | + |
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Preference number: 4 (lower is better) Translates to: SHCASVIPSLPDSLRLLHGTRER*GRRSAQ Trigger: CTGTGCTGACCTCCGGCCCCAGCGCTCCCGGGTCCC...ATGGAGAAGCCGAAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238562.2 |
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| CDS-3UTR CCA 90 bp | CTCCCTCAGGACCTCTGGGATCCCATGGCTACTTGGCCTTGTCGATTCTCTGGCCTGCCCCTATGGGCCTaGTGTGTCCCAGGTTTATCA | + |
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Preference number: 4 (lower is better) Translates to: LPQDLWDPMATWPCRFSGLPLWA*CVPGLS Trigger: TGATAAACCTGGGACACACCAGGCCCATAGGGGCAG...GCCAGAGAATCGACAAGGCCAAGTAGCCATGGGATCCCAGAGGTCCTGAGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037165.6 |
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| CDS-3UTR TCA 90 bp | TCCCTCAGGACCTCTGGGATCCCATGGCTACTTGGCCTTGTCGATTCTCTGGCCCAATGTAGACACTGTTaGGGAAGGGGTGAGGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: SLRTSGIPWLLGLVDSLAQCRHC*GRGEGG Trigger: ACCACCCTCACCCCTTCCTCAACAGTGTCTACATTG...GGCCAGAGAATCGACAAGGCCAAGTAGCCATGGGATCCCAGAGGTCCTGAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS-3UTR TCA 90 bp | TGGCAAGAGGACACTGGCAAAGCCACTGCAAGTAGCCTGTGGGAGATTTTTCTTTGGGCAGCAGCTTCCTaGGCTCTGCGAAGGCGCCGT | + |
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Preference number: 4 (lower is better) Translates to: WQEDTGKATASSLWEIFLWAAAS*ALRRRR Trigger: ACGGCGCCTTCGCAGAGCTCAGGAAGCTGCTGCCCA...AAGAAAAATCTCCCACAGGCTACTTGCAGTGGCTTTGCCAGTGTCCTCTTGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS-3UTR CCA 90 bp | CGGCCCTGGCAAGAGGACACTGGCAAAGCCACTGCAAGTAGCCTGTGGGAGATTAAGTCCAGCTCACTATaGCTTGGTCTGCGCTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: RPWQEDTGKATASSLWEIKSSSL*LGLRFS Trigger: GCTGAAGCGCAGACCAAGCCATAGTGAGCTGGACTT...AATCTCCCACAGGCTACTTGCAGTGGCTTTGCCAGTGTCCTCTTGCCAGGGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS-3UTR CCA 90 bp | TGTCGATTCTCTGGCCTCGGCCCTGGCAAGAGGACACTGGCAAAGCCACTGCAAAGCCTATATACTTCATaGCCAGGCGCAGCACCTCGT | + |
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Preference number: 4 (lower is better) Translates to: CRFSGLGPGKRTLAKPLQSLYTS*PGAAPR Trigger: ACGAGGTGCTGCGCCTGGCCATGAAGTATATAGGCT...TTGCAGTGGCTTTGCCAGTGTCCTCTTGCCAGGGCCGAGGCCAGAGAATCGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS-3UTR CCA 90 bp | CTCCCTCAGGACCTCTGGGATCCCATGGCTACTTGGCCTTGTCGATTCTCTGGCAGCCTATATACTTCATaGCCAGGCGCAGCACCTCGT | + |
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Preference number: 4 (lower is better) Translates to: LPQDLWDPMATWPCRFSGSLYTS*PGAAPR Trigger: ACGAGGTGCTGCGCCTGGCCATGAAGTATATAGGCT...GCCAGAGAATCGACAAGGCCAAGTAGCCATGGGATCCCAGAGGTCCTGAGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS-3UTR TCA 90 bp | TGGCAAGAGGACACTGGCAAAGCCACTGCAAGTAGCCTGTGGGAGATTTTTCTTGCTCACGGCTGTTGGTaGACACTCGCCGAGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: WQEDTGKATASSLWEIFLAHGCW*TLAEPP Trigger: AGGTGGCTCGGCGAGTGTTCACCAACAGCCGTGAGC...AAGAAAAATCTCCCACAGGCTACTTGCAGTGGCTTTGCCAGTGTCCTCTTGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS-3UTR CCA 90 bp | AGGACACTGGCAAAGCCACTGCAAGTAGCCTGTGGGAGATTTTTCTTAAAAGTCTTCCGGTCGGGCGGGTaGGTGGGCAGCAGCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: RTLAKPLQVACGRFFLKVFRSGG*VGSSFL Trigger: CAGGAAGCTGCTGCCCACCCACCCGCCCGACCGGAA...GACTTTTAAGAAAAATCTCCCACAGGCTACTTGCAGTGGCTTTGCCAGTGTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS-3UTR GCA 90 bp | GTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTTCGGCTTCTCCATTGCAGCACCTCGTTCTTaGTCAGCTTCCGGTCGGGCG | + |
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Preference number: 4 (lower is better) Translates to: VTALLLYHLCLTLFGFSIAAPRS*SASGRA Trigger: CGCCCGACCGGAAGCTGAGCAAGAACGAGGTGCTGC...AATGGAGAAGCCGAAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238562.2 |
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| CDS-3UTR GCA 90 bp | AGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTTCGGCTTCTCCATCCCAAGGCAGTTAGCTaGAGCAAGGAGGGCCGAAAG | + |
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Preference number: 4 (lower is better) Translates to: SHCASVIPSLPDSLRLLHPKAVS*SKEGRK Trigger: CTTTCGGCCCTCCTTGCTGCAGCTAACTGCCTTGGG...ATGGAGAAGCCGAAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238562.2 |
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| CDS-3UTR GCA 90 bp | AGAAAAACAAATGCAAGAGTGCCTGAGTCTTCGTTGTCGCGGTTAACAGGATCACAGCTTCCTGAGCTCTaGGAAGGCGCCGTTAACGTG | + |
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Preference number: 4 (lower is better) Translates to: RKTNARVPESSLSRLTGSQLPEL*EGAVNV Trigger: CACGTTAACGGCGCCTTCGCAGAGCTCAGGAAGCTG...TGATCCTGTTAACCGCGACAACGAAGACTCAGGCACTCTTGCATTTGTTTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238562.2 |
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| CDS GCA 90 bp | CAGCAAGGAGGGCCGAAAGGCACTGAGCTCTGTGGTGGGCATGGCTaGCCCTATGGGCCTGGTGTGTCCCAGGTTTATCACTGGCACGCC | + |
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Preference number: 5 (lower is better) Translates to: QQGGPKGTELCGGHG*PYGPGVSQVYHWHA Trigger: GGCGTGCCAGTGATAAACCTGGGACACACCAGGCCCATAGGGGCAGCCATGCCCACCACAGAGCTCAGTGCCTTTCGGCCCTCCTTGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037165.6 |
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| CDS-3UTR CAA 90 bp | CCTGGCAAGAGGACACTGGCAAAGCCACTGCAAGTAGCCTGTGGGAGATTTTTCCTGCGCGCAGGTGGCTaGCGGGACCCGGGAGCGCTG | + |
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Preference number: 5 (lower is better) Translates to: PGKRTLAKPLQVACGRFFLRAGG*RDPGAL Trigger: CAGCGCTCCCGGGTCCCGCAAGCCACCTGCGCGCAG...GAAAAATCTCCCACAGGCTACTTGCAGTGGCTTTGCCAGTGTCCTCTTGCCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS-3UTR CAA 90 bp | CCTCAGGACCTCTGGGATCCCATGGCTACTTGGCCTTGTCGATTCTCTGGCCTCCGCAGCACCTCGTTCTaGCTCAGCTTCCGGTCGGGC | + |
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Preference number: 5 (lower is better) Translates to: PQDLWDPMATWPCRFSGLRSTSF*LSFRSG Trigger: GCCCGACCGGAAGCTGAGCAAGAACGAGGTGCTGCG...GAGGCCAGAGAATCGACAAGGCCAAGTAGCCATGGGATCCCAGAGGTCCTGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS-3UTR CAA 90 bp | ATGGCTACTTGGCCTTGTCGATTCTCTGGCCTCGGCCCTGGCAAGAGGACACTGCGCAGCACCTCGTTCTaGCTCAGCTTCCGGTCGGGC | + |
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Preference number: 5 (lower is better) Translates to: MATWPCRFSGLGPGKRTLRSTSF*LSFRSG Trigger: GCCCGACCGGAAGCTGAGCAAGAACGAGGTGCTGCG...CAGTGTCCTCTTGCCAGGGCCGAGGCCAGAGAATCGACAAGGCCAAGTAGCCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS-3UTR CAA 90 bp | CTCCCACACACTTGTCTAGGGTCTTCCCGCCTCCAGCAGGGGGCGCCGATGAGAGACGTCTGCTCCAACTaGATGGGTCTCACTGACCCA | + |
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Preference number: 5 (lower is better) Translates to: LPHTCLGSSRLQQGAPMRDVCSN*MGLTDP Trigger: TGGGTCAGTGAGACCCATCAAGTTGGAGCAGACGTC...TCTCATCGGCGCCCCCTGCTGGAGGCGGGAAGACCCTAGACAAGTGTGTGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS CCA 90 bp | CTTCTGGGGTTGGTGCCCGTCAGCCAAGTCCAGCTCACTATGGCTTaGTCTGCGCTTCAGCCGGCTGTTAGGGAAGATGCTGAAGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: LLGLVPVSQVQLTMA*SALQPAVREDAEGS Trigger: GGACCCTTCAGCATCTTCCCTAACAGCCGGCTGAAGCGCAGACCAAGCCATAGTGAGCTGGACTTGGCTGACGGGCACCAACCCCAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS CCA 90 bp | GCCACCTTCTGGGGTTGGTGCCCGTCAGCCAAGTCCAGCTCACTATaGCTTGGTCTGCGCTTCAGCCGGCTGTTAGGGAAGATGCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: ATFWGWCPSAKSSSL*LGLRFSRLLGKMLK Trigger: CTTCAGCATCTTCCCTAACAGCCGGCTGAAGCGCAGACCAAGCCATAGTGAGCTGGACTTGGCTGACGGGCACCAACCCCAGAAGGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS-3UTR CAA 90 bp | AGGACACTGGCAAAGCCACTGCAAGTAGCCTGTGGGAGATTTTTCTTAAAAGTCCTGCGCGCAGGTGGCTaGCGGGACCCGGGAGCGCTG | + |
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Preference number: 5 (lower is better) Translates to: RTLAKPLQVACGRFFLKVLRAGG*RDPGAL Trigger: CAGCGCTCCCGGGTCCCGCAAGCCACCTGCGCGCAG...GACTTTTAAGAAAAATCTCCCACAGGCTACTTGCAGTGGCTTTGCCAGTGTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS GCA 72 bp | GCGTGCAGCCTCTACTCTGTGCCCGGCCCCGAAGCGTaGGCTGCCCTCCACGCCCCTGCGCGCAGGTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: ACSLYSVPGPEA*AALHAPARRWL Trigger: AAGCCACCTGCGCGCAGGGGCGTGGAGGGCAGCGCACGCTTCGGGGCCGGGCACAGAGTAGAGGCTGCACGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS GCA 72 bp | GGAAGCACGGGCTGTGAGCGTGCAGCCTCTACTCTGTaGCCGGCCCCGAAGCGTGCGCTGCCCTCCACGCCC | + |
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Preference number: 6 (lower is better) Translates to: GSTGCERAASTL*PAPKRALPSTP Trigger: GGGCGTGGAGGGCAGCGCACGCTTCGGGGCCGGGCACAGAGTAGAGGCTGCACGCTCACAGCCCGTGCTTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS TCA 72 bp | TCGGTGGTCCACCTCCTCTGTAGAAAGGGGCCCAGGTaGGGCCGGCTTAGAGGGAGGGGCAGGTGCTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SVVHLLCRKGPR*GRLRGRGRCWA Trigger: AGCCCAGCACCTGCCCCTCCCTCTAAGCCGGCCTCACCTGGGCCCCTTTCTACAGAGGAGGTGGACCACCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037165.6 |
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| CDS CCA 72 bp | CCGGGAGCGCTGGGGCCGGAGGTCAGCACAGCCGTTTaGTCTCGCAGCAGCCGCACCAGGAAGCCTATATAC | + |
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Preference number: 6 (lower is better) Translates to: PGALGPEVSTAV*SRSSRTRKPIY Trigger: GTATATAGGCTTCCTGGTGCGGCTGCTGCGAGACCAAACGGCTGTGCTGACCTCCGGCCCCAGCGCTCCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037165.6 ENSMUST00000238338.2 ENSMUST00000238562.2 |
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| CDS CAA 72 bp | CCCGGGAGCGCTGGGGCCGGAGGTCAGCACAGCCGTTaGGTCTCGCAGCAGCCGCACCAGGAAGCCTATATA | + |
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Preference number: 6 (lower is better) Translates to: PGSAGAGGQHSR*VSQQPHQEAYI Trigger: TATATAGGCTTCCTGGTGCGGCTGCTGCGAGACCAAACGGCTGTGCTGACCTCCGGCCCCAGCGCTCCCGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037165.6 ENSMUST00000238338.2 ENSMUST00000238562.2 |
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| CDS GCA 72 bp | GGGCCGAAAGGCACTGAGCTCTGTGGTGGGCATGGCTaGCCCTATGGGCCTGGTGTGTCCCAGGTTTATCAC | + |
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Preference number: 6 (lower is better) Translates to: GPKGTELCGGHG*PYGPGVSQVYH Trigger: GTGATAAACCTGGGACACACCAGGCCCATAGGGGCAGCCATGCCCACCACAGAGCTCAGTGCCTTTCGGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037165.6 |
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| CDS CCA 72 bp | GGCTGGAGGCACATACCATCTCAGTTTTCTCAGTCATaGCGGAACCCACCTCTGCTCTGGCCTGGGGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: GWRHIPSQFSQS*RNPPLLWPGAG Trigger: GCCCGCCCCAGGCCAGAGCAGAGGTGGGTTCCGCCATGACTGAGAAAACTGAGATGGTATGTGCCTCCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037165.6 |
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| CDS GCA 72 bp | GCCAGGGTAGGTGGAGCTCTTCCCAAGGCAGTTAGCTaGAGCAAGGAGGGCCGAAAGGCACTGAGCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: ARVGGALPKAVS*SKEGRKALSSV Trigger: CACAGAGCTCAGTGCCTTTCGGCCCTCCTTGCTGCAGCTAACTGCCTTGGGAAGAGCTCCACCTACCCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS CCA 72 bp | TGGGGTTGGTGCCCGTCAGCCAAGTCCAGCTCACTATaGCTTGGTCTGCGCTTCAGCCGGCTGTTAGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: WGWCPSAKSSSL*LGLRFSRLLGK Trigger: CTTCCCTAACAGCCGGCTGAAGCGCAGACCAAGCCATAGTGAGCTGGACTTGGCTGACGGGCACCAACCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS CCA 72 bp | TCACGGCTGTTGGTGAACACTCGCCGAGCCACCTTCTaGGGTTGGTGCCCGTCAGCCAAGTCCAGCTCACTA | + |
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Preference number: 6 (lower is better) Translates to: SRLLVNTRRATF*GWCPSAKSSSL Trigger: TAGTGAGCTGGACTTGGCTGACGGGCACCAACCCCAGAAGGTGGCTCGGCGAGTGTTCACCAACAGCCGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS CAA 72 bp | CACCGCACCTCAGGACTCAGGGACGTCTGCTCCAACTaGATGGGTCTCACTGACCCATTGGGGTCGCCATCA | + |
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Preference number: 6 (lower is better) Translates to: HRTSGLRDVCSN*MGLTDPLGSPS Trigger: TGATGGCGACCCCAATGGGTCAGTGAGACCCATCAAGTTGGAGCAGACGTCCCTGAGTCCTGAGGTGCGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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| CDS CCA 72 bp | TTGGTGCCCGTCAGCCAAGTCCAGCTCACTATGGCTTaGTCTGCGCTTCAGCCGGCTGTTAGGGAAGATGCT | + |
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Preference number: 6 (lower is better) Translates to: LVPVSQVQLTMA*SALQPAVREDA Trigger: AGCATCTTCCCTAACAGCCGGCTGAAGCGCAGACCAAGCCATAGTGAGCTGGACTTGGCTGACGGGCACCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037165.6 ENSMUST00000238562.2 |
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