Pregenerated sensors for LYG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061584Ensembl transcript IDs: ENSMUST00000078307.7
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TACCTCAACCAGTGGCTTTCAGAGGTGCTGTGCAGACTCCAGTCCTaGACCTGTGCAGATAGATCTGTGGTAAATGCTCATGGCTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: YLNQWLSEVLCRLQS*TCADRSVVNAHGFP Trigger: AGGAAAGCCATGAGCATTTACCACAGATCTATCTGCACAGGTGCAGGACTGGAGTCTGCACAGCACCTCTGAAAGCCACTGGTTGAGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR CCA 90 bp | TGGCCTCTGAGACAAACACATCTCATGAGCAGAGTCCCAAGCAGCTaGGGTAGATACTGTGAAAGGGACAAAGGCTCACTTCTGATTAGT | + |
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Preference number: 1 (lower is better) Translates to: WPLRQTHLMSRVPSS*GRYCERDKGSLLIS Trigger: ACTAATCAGAAGTGAGCCTTTGTCCCTTTCACAGTATCTACCCCAGCTGCTTGGGACTCTGCTCATGAGATGTGTTTGTCTCAGAGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR CCA 90 bp | ATCTTGGGATATAGAGCGAGACCTTGTCTCCAAATCCATGATTCCTaGCCTCTGAGACAAACACATCTCATGAGCAGAGTCCCAAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: ILGYRARPCLQIHDS*PLRQTHLMSRVPSS Trigger: GCTGCTTGGGACTCTGCTCATGAGATGTGTTTGTCTCAGAGGCCAGGAATCATGGATTTGGAGACAAGGTCTCGCTCTATATCCCAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR CCA 90 bp | ACTATTTGTAACACGTTGTTCAGTCGGGATGGAAACAGGAAGCTCTaGAGTGATGCTTCCTCTCTCCTAAAGCAGATGCAGCAGATGTAC | + |
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Preference number: 1 (lower is better) Translates to: TICNTLFSRDGNRKL*SDASSLLKQMQQMY Trigger: GTACATCTGCTGCATCTGCTTTAGGAGAGAGGAAGCATCACTCCAGAGCTTCCTGTTTCCATCCCGACTGAACAACGTGTTACAAATAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR TCA 90 bp | GTCAGAACAAGAACTCTGAGGAAACAGATTCAGGGAGTAAGCCAGTaGCTGTTTCCTGTTTGGAGATACCTGGCCTACACGTTAGTTATC | + |
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Preference number: 1 (lower is better) Translates to: VRTRTLRKQIQGVSQ*LFPVWRYLAYTLVI Trigger: GATAACTAACGTGTAGGCCAGGTATCTCCAAACAGGAAACAGTCACTGGCTTACTCCCTGAATCTGTTTCCTCAGAGTTCTTGTTCTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR CCA 90 bp | TTCTATTGGTTCCAACAGTCCATTCTAATAGATTCTGCAGAAGCCTaGCACATGAACAGGAAGGCTTGTGTATTTAAGACTATTTGTAAC | + |
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Preference number: 1 (lower is better) Translates to: FYWFQQSILIDSAEA*HMNRKACVFKTICN Trigger: GTTACAAATAGTCTTAAATACACAAGCCTTCCTGTTCATGTGCCAGGCTTCTGCAGAATCTATTAGAATGGACTGTTGGAACCAATAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR-3UTR TCA 90 bp | CAAACACATCTCATGAGCAGAGTCCCAAGCAGCTGGGGTAGATACTGTGAAAGGTTGGGAGGGACCAGCTaGGTACCACACCGGCGTAAC | + |
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Preference number: 2 (lower is better) Translates to: QTHLMSRVPSSWGRYCERLGGTS*VPHRRN Trigger: GTTACGCCGGTGTGGTACTCAGCTGGTCCCTCCCAA...CCTTTCACAGTATCTACCCCAGCTGCTTGGGACTCTGCTCATGAGATGTGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR-3UTR GCA 90 bp | TCAGGATTCTCACTCGCTCTTCCTGTCTGTGCCCCTAGCTTCTCACTCTTGGAAAGTGGCTTTCAGAGGTaGTGTGCAGACTCCAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: SGFSLALPVCAPSFSLLESGFQR*CADSSP Trigger: AGGACTGGAGTCTGCACAGCACCTCTGAAAGCCACT...TTCCAAGAGTGAGAAGCTAGGGGCACAGACAGGAAGAGCGAGTGAGAATCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR-3UTR CCA 90 bp | AGTGGCTTTCAGAGGTGCTGTGCAGACTCCAGTCCTGCACCTGTGCAGATAGATAGAGTCCCAAGCAGCTaGGGTAGATACTGTGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: SGFQRCCADSSPAPVQIDRVPSS*GRYCER Trigger: CCTTTCACAGTATCTACCCCAGCTGCTTGGGACTCT...ATCTATCTGCACAGGTGCAGGACTGGAGTCTGCACAGCACCTCTGAAAGCCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR-3UTR CCA 90 bp | GATGCTTCCTCTCTCCTAAAGCAGATGCAGCAGATGTACCTCAGGATTCTCACTTGTGGTAAATGCTCATaGCTTTCCTGCAAGGCGGAG | + |
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Preference number: 2 (lower is better) Translates to: DASSLLKQMQQMYLRILTCGKCS*LSCKAE Trigger: CTCCGCCTTGCAGGAAAGCCATGAGCATTTACCACA...AGTGAGAATCCTGAGGTACATCTGCTGCATCTGCTTTAGGAGAGAGGAAGCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR-3UTR TCA 90 bp | CTGTCTGTGCCCCTAGCTTCTCACTCTTGGAAATTTAGACAAGGGTTCCACATTCAGACTAGCAAGAAATaGCACCCTCTCCCTACAGGT | + |
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Preference number: 2 (lower is better) Translates to: LSVPLASHSWKFRQGFHIQTSKK*HPLPTG Trigger: ACCTGTAGGGAGAGGGTGTCATTTCTTGCTAGTCTG...AATGTGGAACCCTTGTCTAAATTTCCAAGAGTGAGAAGCTAGGGGCACAGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR-3UTR CCA 90 bp | CAAACACATCTCATGAGCAGAGTCCCAAGCAGCTGGGGTAGATACTGTGAAAGGGCTAATATTAAACCTTaGGAGGGACCAGCTGAGTAC | + |
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Preference number: 2 (lower is better) Translates to: QTHLMSRVPSSWGRYCERANIKP*EGPAEY Trigger: GTACTCAGCTGGTCCCTCCCAAGGTTTAATATTAGC...CCTTTCACAGTATCTACCCCAGCTGCTTGGGACTCTGCTCATGAGATGTGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR-3UTR CCA 90 bp | TCAGGATTCTCACTCGCTCTTCCTGTCTGTGCCCCTAGCTTCTCACTCTTGGAAGACATCTTTACAATGTaGCCTCCTATAGGACATCTC | + |
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Preference number: 2 (lower is better) Translates to: SGFSLALPVCAPSFSLLEDIFTM*PPIGHL Trigger: GAGATGTCCTATAGGAGGCCACATTGTAAAGATGTC...TTCCAAGAGTGAGAAGCTAGGGGCACAGACAGGAAGAGCGAGTGAGAATCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR-3UTR TCA 90 bp | GATGCTTCCTCTCTCCTAAAGCAGATGCAGCAGATGTACCTCAGGATTCTCACTCCTATGAACCATACGTaGAGCTGGGTTTTTCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: DASSLLKQMQQMYLRILTPMNHT*SWVFLF Trigger: AAAGAGAAAAACCCAGCTTCACGTATGGTTCATAGG...AGTGAGAATCCTGAGGTACATCTGCTGCATCTGCTTTAGGAGAGAGGAAGCATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR CAA 90 bp | TCTGAGGAAACAGATTCAGGGAGTAAGCCAGTGACTGTTTCCTGTTaGGAGATACCTGGCCTACACGTTAGTTATCATTGCCATAGTAAC | + |
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Preference number: 2 (lower is better) Translates to: SEETDSGSKPVTVSC*EIPGLHVSYHCHSN Trigger: GTTACTATGGCAATGATAACTAACGTGTAGGCCAGGTATCTCCAAACAGGAAACAGTCACTGGCTTACTCCCTGAATCTGTTTCCTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR-3UTR TCA 90 bp | ACAGGAAGGCTTGTGTATTTAAGACTATTTGTAACACGTTGTTCAGTCGGGATGGACAAACACATCTCATaGGCAGAGTCCCAAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: TGRLVYLRLFVTRCSVGMDKHIS*AESQAA Trigger: AGCTGCTTGGGACTCTGCTCATGAGATGTGTTTGTC...CATCCCGACTGAACAACGTGTTACAAATAGTCTTAAATACACAAGCCTTCCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR-3UTR GCA 90 bp | ACAGGAAGGCTTGTGTATTTAAGACTATTTGTAACACGTTGTTCAGTCGGGATGTGCAGACTCCAGTCCTaGACCTGTGCAGATAGATCT | + |
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Preference number: 2 (lower is better) Translates to: TGRLVYLRLFVTRCSVGMCRLQS*TCADRS Trigger: AGATCTATCTGCACAGGTGCAGGACTGGAGTCTGCA...CATCCCGACTGAACAACGTGTTACAAATAGTCTTAAATACACAAGCCTTCCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR-3UTR CCA 90 bp | AGACTATTTGTAACACGTTGTTCAGTCGGGATGGAAACAGGAAGCTCTGGAGTGAGTTTGAGGACATCTTaGGATATAGAGCGAGACCTT | + |
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Preference number: 2 (lower is better) Translates to: RLFVTRCSVGMETGSSGVSLRTS*DIERDL Trigger: AAGGTCTCGCTCTATATCCCAAGATGTCCTCAAACT...CACTCCAGAGCTTCCTGTTTCCATCCCGACTGAACAACGTGTTACAAATAGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR-3UTR TCA 90 bp | AGACTATTTGTAACACGTTGTTCAGTCGGGATGGAAACAGGAAGCTCTGGAGTGACAAAGGCTCACTTCTaGTTAGTAATTGTGGTAGAG | + |
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Preference number: 2 (lower is better) Translates to: RLFVTRCSVGMETGSSGVTKAHF*LVIVVE Trigger: CTCTACCACAATTACTAATCAGAAGTGAGCCTTTGT...CACTCCAGAGCTTCCTGTTTCCATCCCGACTGAACAACGTGTTACAAATAGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR-3UTR CCA 90 bp | AGGATGAAGACCGAGATAGTTCTATTGGTTCCAACAGTCCATTCTAATAGATTCGGAAACAGGAAGCTCTaGAGTGATGCTTCCTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: RMKTEIVLLVPTVHSNRFGNRKL*SDASSL Trigger: GAGAGAGGAAGCATCACTCCAGAGCTTCCTGTTTCC...GAATCTATTAGAATGGACTGTTGGAACCAATAGAACTATCTCGGTCTTCATCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR-3UTR TCA 90 bp | ACAGGAAGGCTTGTGTATTTAAGACTATTTGTAACACGTTGTTCAGTCGGGATGAAAAGAAATTACCCCTaGGCAGCATGGCCAACTGAA | + |
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Preference number: 2 (lower is better) Translates to: TGRLVYLRLFVTRCSVGMKRNYP*AAWPTE Trigger: TTCAGTTGGCCATGCTGCTCAGGGGTAATTTCTTTT...CATCCCGACTGAACAACGTGTTACAAATAGTCTTAAATACACAAGCCTTCCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR-3UTR TCA 90 bp | ACAGGAAGGCTTGTGTATTTAAGACTATTTGTAACACGTTGTTCAGTCGGGATGTCAGAACAAGAACTCTaGGGAAACAGATTCAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: TGRLVYLRLFVTRCSVGMSEQEL*GNRFRE Trigger: CTCCCTGAATCTGTTTCCTCAGAGTTCTTGTTCTGA...CATCCCGACTGAACAACGTGTTACAAATAGTCTTAAATACACAAGCCTTCCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR-3UTR GCA 90 bp | AGACTATTTGTAACACGTTGTTCAGTCGGGATGGAAACAGGAAGCTCTGGAGTGTGGTGCCACATGTTTTaGTGTTCTCTAATTTCGTAT | + |
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Preference number: 2 (lower is better) Translates to: RLFVTRCSVGMETGSSGVWCHMF*CSLISY Trigger: ATACGAAATTAGAGAACAGCAAAACATGTGGCACCA...CACTCCAGAGCTTCCTGTTTCCATCCCGACTGAACAACGTGTTACAAATAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR-3UTR TCA 90 bp | ATGAAGACCGAGATAGTTCTATTGGTTCCAACAGTCCATTCTAATAGATTCTGCTATCCAGGGCTAAAATaGAGTCCAGCTAGATCATGC | + |
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Preference number: 2 (lower is better) Translates to: MKTEIVLLVPTVHSNRFCYPGLK*SPARSC Trigger: GCATGATCTAGCTGGACTTCATTTTAGCCCTGGATA...GCAGAATCTATTAGAATGGACTGTTGGAACCAATAGAACTATCTCGGTCTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR-3UTR GCA 90 bp | AGTAGCTTGGTGCCACATGTTTTGCTGTTCTCTAATTTCGTATCACGGAGCCACTATAACAGTTTTTCCTaGTTACACCCACATTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: SSLVPHVLLFSNFVSRSHYNSFS*LHPHSC Trigger: ACAAGAATGTGGGTGTAAGCAGGAAAAACTGTTATA...GTGGCTCCGTGATACGAAATTAGAGAACAGCAAAACATGTGGCACCAAGCTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR GCA 72 bp | CTACAGGTAGGTACCTCAACCAGTGGCTTTCAGAGGTaGTGTGCAGACTCCAGTCCTGCACCTGTGCAGATA | + |
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Preference number: 3 (lower is better) Translates to: LQVGTSTSGFQR*CADSSPAPVQI Trigger: TATCTGCACAGGTGCAGGACTGGAGTCTGCACAGCACCTCTGAAAGCCACTGGTTGAGGTACCTACCTGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR GCA 72 bp | CAGTGGCTTTCAGAGGTGCTGTGCAGACTCCAGTCCTaGACCTGTGCAGATAGATCTGTGGTAAATGCTCAT | + |
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Preference number: 3 (lower is better) Translates to: QWLSEVLCRLQS*TCADRSVVNAH Trigger: ATGAGCATTTACCACAGATCTATCTGCACAGGTGCAGGACTGGAGTCTGCACAGCACCTCTGAAAGCCACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR CCA 72 bp | AACACGTTGTTCAGTCGGGATGGAAACAGGAAGCTCTaGAGTGATGCTTCCTCTCTCCTAAAGCAGATGCAG | + |
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Preference number: 3 (lower is better) Translates to: NTLFSRDGNRKL*SDASSLLKQMQ Trigger: CTGCATCTGCTTTAGGAGAGAGGAAGCATCACTCCAGAGCTTCCTGTTTCCATCCCGACTGAACAACGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR TCA 72 bp | GGCATAGTTCTCAGTAGATTTCTGGGAGTTGGCTGTTaGGCTACTGGTGGAAGGAGGATGAAGACCGAGATA | + |
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Preference number: 3 (lower is better) Translates to: GIVLSRFLGVGC*ATGGRRMKTEI Trigger: TATCTCGGTCTTCATCCTCCTTCCACCAGTAGCTCAACAGCCAACTCCCAGAAATCTACTGAGAACTATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR-3UTR CAA 90 bp | GGATTCTCACTCGCTCTTCCTGTCTGTGCCCCTAGCTTCTCACTCTTGGAAATTCAAGAAACTAAACAGTaGTACATCCTCCCCTCCCTT | + |
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Preference number: 3 (lower is better) Translates to: GFSLALPVCAPSFSLLEIQETKQ*YILPSL Trigger: AAGGGAGGGGAGGATGTACAACTGTTTAGTTTCTTG...AATTTCCAAGAGTGAGAAGCTAGGGGCACAGACAGGAAGAGCGAGTGAGAATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR CCA 72 bp | TATAGAGCGAGACCTTGTCTCCAAATCCATGATTCCTaGCCTCTGAGACAAACACATCTCATGAGCAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: YRARPCLQIHDS*PLRQTHLMSRV Trigger: GACTCTGCTCATGAGATGTGTTTGTCTCAGAGGCCAGGAATCATGGATTTGGAGACAAGGTCTCGCTCTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR CCA 72 bp | CAAGGCGGAGTCCCATTGCCAACTAGGGTAGTAGCTTaGTGCCACATGTTTTGCTGTTCTCTAATTTCGTAT | + |
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Preference number: 3 (lower is better) Translates to: QGGVPLPTRVVA*CHMFCCSLISY Trigger: ATACGAAATTAGAGAACAGCAAAACATGTGGCACCAAGCTACTACCCTAGTTGGCAATGGGACTCCGCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR CCA 72 bp | TCGCTCTTCCTGTCTGTGCCCCTAGCTTCTCACTCTTaGAAATTTAGACAAGGGTTCCACATTTGTACTTGT | + |
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Preference number: 3 (lower is better) Translates to: SLFLSVPLASHS*KFRQGFHICTC Trigger: ACAAGTACAAATGTGGAACCCTTGTCTAAATTTCCAAGAGTGAGAAGCTAGGGGCACAGACAGGAAGAGCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR TCA 72 bp | ATTTGTACTTGTTTAGCACATCAGACTAGCAAGAAATaGCACCCTCTCCCTACAGGTAGGTACCTCAACCAG | + |
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Preference number: 3 (lower is better) Translates to: ICTCLAHQTSKK*HPLPTGRYLNQ Trigger: CTGGTTGAGGTACCTACCTGTAGGGAGAGGGTGTCATTTCTTGCTAGTCTGATGTGCTAAACAAGTACAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR GCA 72 bp | TTGCCAACTAGGGTAGTAGCTTGGTGCCACATGTTTTaGTGTTCTCTAATTTCGTATCACGGAGCCACTTTA | + |
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Preference number: 3 (lower is better) Translates to: LPTRVVAWCHMF*CSLISYHGATL Trigger: TAAAGTGGCTCCGTGATACGAAATTAGAGAACAGCAAAACATGTGGCACCAAGCTACTACCCTAGTTGGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR TCA 72 bp | TTACACCCACATTCTTGTGACAGGTCTAGTTTAGAGTaGGCCAAACTAAGACATCTTTACAATGTGGCCTCC | + |
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Preference number: 3 (lower is better) Translates to: LHPHSCDRSSLE*AKLRHLYNVAS Trigger: GGAGGCCACATTGTAAAGATGTCTTAGTTTGGCTCACTCTAAACTAGACCTGTCACAAGAATGTGGGTGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR GCA 72 bp | CCTGAGCAGCATGGCCAACTGAAGAACGTCTCAGTCTaGACACATATAGGGACAAGAACAATATTTAATAAA | + |
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Preference number: 3 (lower is better) Translates to: PEQHGQLKNVSV*THIGTRTIFNK Trigger: TTTATTAAATATTGTTCTTGTCCCTATATGTGTGCAGACTGAGACGTTCTTCAGTTGGCCATGCTGCTCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR TCA 72 bp | TATGTATGTCTATGCAGTCTTCCTATGAACCATACGTaGAGCTGGGTTTTTCTCTTTGTGATAAAGACGGGA | + |
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Preference number: 3 (lower is better) Translates to: YVCLCSLPMNHT*SWVFLFVIKTG Trigger: TCCCGTCTTTATCACAAAGAGAAAAACCCAGCTTCACGTATGGTTCATAGGAAGACTGCATAGACATACATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR GCA 72 bp | TTTCGTATCACGGAGCCACTTTATAACAGTTTTTCCTaGTTACACCCACATTCTTGTGACAGGTCTAGTTTA | + |
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Preference number: 3 (lower is better) Translates to: FRITEPLYNSFS*LHPHSCDRSSL Trigger: TAAACTAGACCTGTCACAAGAATGTGGGTGTAAGCAGGAAAAACTGTTATAAAGTGGCTCCGTGATACGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR GCA 72 bp | TTCATTAATTTTAACCATTTCTTTGCTCCAATTGAATaGAGTGGGCTAATATTAAACCTTGGGAGGGACCAG | + |
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Preference number: 3 (lower is better) Translates to: FINFNHFFAPIE*SGLILNLGRDQ Trigger: CTGGTCCCTCCCAAGGTTTAATATTAGCCCACTGCATTCAATTGGAGCAAAGAAATGGTTAAAATTAATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| CDS-3UTR CCA 90 bp | GGATTCTCACTCGCTCTTCCTGTCTGTGCCCCTAGCTTCTCACTCTTGGAAATTAGGACAGCCCCGCCGTaGCTTTCCCTGGAGATGATG | + |
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Preference number: 4 (lower is better) Translates to: GFSLALPVCAPSFSLLEIRTAPP*LSLEMM Trigger: CATCATCTCCAGGGAAAGCCACGGCGGGGCTGTCCT...AATTTCCAAGAGTGAGAAGCTAGGGGCACAGACAGGAAGAGCGAGTGAGAATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| CDS-3UTR TCA 90 bp | TCAGGATTCTCACTCGCTCTTCCTGTCTGTGCCCCTAGCTTCTCACTCTTGGAAAAGTCTCCATGGTCATaGTGTCCCCATAGCAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: SGFSLALPVCAPSFSLLEKSPWS*CPHSSH Trigger: ATGGCTGCTATGGGGACATCATGACCATGGAGACTT...TTCCAAGAGTGAGAAGCTAGGGGCACAGACAGGAAGAGCGAGTGAGAATCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR CAA 72 bp | CCGAGGCAGGAGGACTTCTACGAGTTTGAGGACATCTaGGGATATAGAGCGAGACCTTGTCTCCAAATCCAT | + |
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Preference number: 4 (lower is better) Translates to: PRQEDFYEFEDI*GYRARPCLQIH Trigger: ATGGATTTGGAGACAAGGTCTCGCTCTATATCCCAAGATGTCCTCAAACTCGTAGAAGTCCTCCTGCCTCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR CAA 72 bp | AATTTGGGAAGCCGAGGCAGGAGGACTTCTACGAGTTaGAGGACATCTTGGGATATAGAGCGAGACCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: NLGSRGRRTSTS*RTSWDIERDLV Trigger: GACAAGGTCTCGCTCTATATCCCAAGATGTCCTCAAACTCGTAGAAGTCCTCCTGCCTCGGCTTCCCAAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| CDS-3UTR CCA 90 bp | AGACTATTTGTAACACGTTGTTCAGTCGGGATGGAAACAGGAAGCTCTGGAGTGAACCTCTGCCCCTTATaGTCCCAGCCATTTTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: RLFVTRCSVGMETGSSGVNLCPL*SQPFCR Trigger: CCTGCAAAATGGCTGGGACCATAAGGGGCAGAGGTT...CACTCCAGAGCTTCCTGTTTCCATCCCGACTGAACAACGTGTTACAAATAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| CDS-3UTR CCA 90 bp | TTCCTCTCTCCTAAAGCAGATGCAGCAGATGTACCTCAGGATTCTCACTCGCTCAACATTTCCGAACCGTaGATCCCACAGTTCATCAGA | + |
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Preference number: 4 (lower is better) Translates to: FLSPKADAADVPQDSHSLNISEP*IPQFIR Trigger: TCTGATGAACTGTGGGATCCACGGTTCGGAAATGTT...GAGCGAGTGAGAATCCTGAGGTACATCTGCTGCATCTGCTTTAGGAGAGAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| CDS-3UTR CCA 90 bp | ATGAAGACCGAGATAGTTCTATTGGTTCCAACAGTCCATTCTAATAGATTCTGCGGCAGCGATGAGGGCTaGGTCAATACAGTGTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: MKTEIVLLVPTVHSNRFCGSDEG*VNTVSL Trigger: CAGAGACACTGTATTGACCCAGCCCTCATCGCTGCC...GCAGAATCTATTAGAATGGACTGTTGGAACCAATAGAACTATCTCGGTCTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| CDS-3UTR CCA 90 bp | GATGCTTCCTCTCTCCTAAAGCAGATGCAGCAGATGTACCTCAGGATTCTCACTGAGCTGTATTCCAGGTaGGAAATTTCCTCTTCATTG | + |
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Preference number: 4 (lower is better) Translates to: DASSLLKQMQQMYLRILTELYSR*EISSSL Trigger: CAATGAAGAGGAAATTTCCCACCTGGAATACAGCTC...AGTGAGAATCCTGAGGTACATCTGCTGCATCTGCTTTAGGAGAGAGGAAGCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| 3UTR CAA 72 bp | ACAGATTCAGGGAGTAAGCCAGTGACTGTTTCCTGTTaGGAGATACCTGGCCTACACGTTAGTTATCATTGC | + |
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Preference number: 4 (lower is better) Translates to: TDSGSKPVTVSC*EIPGLHVSYHC Trigger: GCAATGATAACTAACGTGTAGGCCAGGTATCTCCAAACAGGAAACAGTCACTGGCTTACTCCCTGAATCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| CDS-3UTR CCA 90 bp | GATGCTTCCTCTCTCCTAAAGCAGATGCAGCAGATGTACCTCAGGATTCTCACTCAGGAACCAATAGGATaGTACATATTTTTATCAAGC | + |
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Preference number: 4 (lower is better) Translates to: DASSLLKQMQQMYLRILTQEPIG*YIFLSS Trigger: GCTTGATAAAAATATGTACCATCCTATTGGTTCCTG...AGTGAGAATCCTGAGGTACATCTGCTGCATCTGCTTTAGGAGAGAGGAAGCATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| CDS-3UTR CCA 90 bp | AGGATGAAGACCGAGATAGTTCTATTGGTTCCAACAGTCCATTCTAATAGATTCTCCGGTAAGGTTTTATaGCTTTCAAATCCATCTCGG | + |
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Preference number: 4 (lower is better) Translates to: RMKTEIVLLVPTVHSNRFSGKVL*LSNPSR Trigger: CCGAGATGGATTTGAAAGCCATAAAACCTTACCGGA...GAATCTATTAGAATGGACTGTTGGAACCAATAGAACTATCTCGGTCTTCATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| CDS CCA 90 bp | AGCCCCGCCGTGGCTTTCCCTGGAGATGATGGCAGCGATGAGGGCTaGGTCAATACAGTGTCTCTGCCCCACTTCTTTGATGAGGATCCG | + |
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Preference number: 5 (lower is better) Translates to: SPAVAFPGDDGSDEG*VNTVSLPHFFDEDP Trigger: CGGATCCTCATCAAAGAAGTGGGGCAGAGACACTGTATTGACCCAGCCCTCATCGCTGCCATCATCTCCAGGGAAAGCCACGGCGGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| CDS TCA 90 bp | ACGAGGGTGCACATGAGGGTTCATGGAGTGCACAGAGTGAGTATATaGGCCCTTGGCAGTGCCAACGAGAGCAATAAGTCCCCAGAACAC | + |
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Preference number: 5 (lower is better) Translates to: TRVHMRVHGVHRVSI*ALGSANESNKSPEH Trigger: GTGTTCTGGGGACTTATTGCTCTCGTTGGCACTGCCAAGGGCTCATATACTCACTCTGTGCACTCCATGAACCCTCATGTGCACCCTCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| CDS-3UTR CAA 90 bp | GGCCAACTGAAGAACGTCTCAGTCTGCACACATATAGGGACAAGAACAATATTTATGGTCCCAGCCATTTaGCAGGACAGCCCCGCCGTG | + |
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Preference number: 5 (lower is better) Translates to: GQLKNVSVCTHIGTRTIFMVPAI*QDSPAV Trigger: CACGGCGGGGCTGTCCTGCAAAATGGCTGGGACCAT...AAATATTGTTCTTGTCCCTATATGTGTGCAGACTGAGACGTTCTTCAGTTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| CDS TCA 90 bp | GTTTCCATCCCCGACTTAAAAGCAGTCAGACCACCTTTCAGCTGCTaGGCTGTATTCCAGGTGGGAAATTTCCTCTTCATTGCCTTAATT | + |
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Preference number: 5 (lower is better) Translates to: VSIPDLKAVRPPFSC*AVFQVGNFLFIALI Trigger: AATTAAGGCAATGAAGAGGAAATTTCCCACCTGGAATACAGCTCAGCAGCTGAAAGGTGGTCTGACTGCTTTTAAGTCGGGGATGGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| CDS CCA 90 bp | ACAGACTGTAGAAGGTGTTCCTTGCTATCCCAGGAACCAATAGGATaGTACATATTTTTATCAAGCTGCATCAAGCCAAACCTCTGCCCC | + |
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Preference number: 5 (lower is better) Translates to: TDCRRCSLLSQEPIG*YIFLSSCIKPNLCP Trigger: GGGGCAGAGGTTTGGCTTGATGCAGCTTGATAAAAATATGTACCATCCTATTGGTTCCTGGGATAGCAAGGAACACCTTCTACAGTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| CDS-3UTR CAA 90 bp | ACAGGAAGGCTTGTGTATTTAAGACTATTTGTAACACGTTGTTCAGTCGGGATGTGTAGAAGGTGTTCCTaGCTATCCCAGGAACCAATA | + |
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Preference number: 5 (lower is better) Translates to: TGRLVYLRLFVTRCSVGMCRRCS*LSQEPI Trigger: TATTGGTTCCTGGGATAGCAAGGAACACCTTCTACA...CATCCCGACTGAACAACGTGTTACAAATAGTCTTAAATACACAAGCCTTCCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| CDS CAA 72 bp | CAAGCCAAACCTCTGCCCCTTATGGTCCCAGCCATTTaGCAGGACAGCCCCGCCGTGGCTTTCCCTGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: QAKPLPLMVPAI*QDSPAVAFPGD Trigger: ATCTCCAGGGAAAGCCACGGCGGGGCTGTCCTGCAAAATGGCTGGGACCATAAGGGGCAGAGGTTTGGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| CDS CAA 90 bp | AAGCTGCATCAAGCCAAACCTCTGCCCCTTATGGTCCCAGCCATTTaGCAGGACAGCCCCGCCGTGGCTTTCCCTGGAGATGATGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: KLHQAKPLPLMVPAI*QDSPAVAFPGDDGS Trigger: GCTGCCATCATCTCCAGGGAAAGCCACGGCGGGGCTGTCCTGCAAAATGGCTGGGACCATAAGGGGCAGAGGTTTGGCTTGATGCAGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| CDS CCA 72 bp | AGCCATGGTACAGACGAGGGTGCACATGAGGGTTCATaGAGTGCACAGAGTGAGTATATGAGCCCTTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: SHGTDEGAHEGS*SAQSEYMSPWQ Trigger: CTGCCAAGGGCTCATATACTCACTCTGTGCACTCCATGAACCCTCATGTGCACCCTCGTCTGTACCATGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| CDS GCA 72 bp | CAGGAACCAATAGGATGGTACATATTTTTATCAAGCTaGATCAAGCCAAACCTCTGCCCCTTATGGTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: QEPIGWYIFLSS*IKPNLCPLWSQ Trigger: CTGGGACCATAAGGGGCAGAGGTTTGGCTTGATGCAGCTTGATAAAAATATGTACCATCCTATTGGTTCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| CDS CCA 72 bp | GCTTTCAAATCCATCTCGGCAAACATTTCCGAACCGTaGATCCCACAGTTCATCAGATTATTTATGTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: AFKSISANISEP*IPQFIRLFMSQ Trigger: CTGCGACATAAATAATCTGATGAACTGTGGGATCCACGGTTCGGAAATGTTTGCCGAGATGGATTTGAAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| CDS CCA 72 bp | AGAAGGTGTTCCTTGCTATCCCAGGAACCAATAGGATaGTACATATTTTTATCAAGCTGCATCAAGCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: RRCSLLSQEPIG*YIFLSSCIKPN Trigger: GTTTGGCTTGATGCAGCTTGATAAAAATATGTACCATCCTATTGGTTCCTGGGATAGCAAGGAACACCTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| CDS CAA 72 bp | TCTGTTAGAATCCCAACAGACTGTAGAAGGTGTTCCTaGCTATCCCAGGAACCAATAGGATGGTACATATTT | + |
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Preference number: 6 (lower is better) Translates to: SVRIPTDCRRCS*LSQEPIGWYIF Trigger: AAATATGTACCATCCTATTGGTTCCTGGGATAGCAAGGAACACCTTCTACAGTCTGTTGGGATTCTAACAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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| CDS CAA 90 bp | TTAATTCTTTCTGTTAGAATCCCAACAGACTGTAGAAGGTGTTCCTaGCTATCCCAGGAACCAATAGGATGGTACATATTTTTATCAAGC | + |
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Preference number: 6 (lower is better) Translates to: LILSVRIPTDCRRCS*LSQEPIGWYIFLSS Trigger: GCTTGATAAAAATATGTACCATCCTATTGGTTCCTGGGATAGCAAGGAACACCTTCTACAGTCTGTTGGGATTCTAACAGAAAGAATTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078307.7 |
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