Pregenerated sensors for LYG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026085Ensembl transcript IDs: ENSMUST00000027254.10, ENSMUST00000114894.2
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCTTCAGATCCAACTCAGATGTGCGACTGCAGGCTTCACCAGCTTaGCATATCAGTGGGTCAGGAGAGGCCTCAAGTACGACTATGAAC | + |
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Preference number: 1 (lower is better) Translates to: AFRSNSDVRLQASPA*HISGSGEASSTTMN Trigger: GTTCATAGTCGTACTTGAGGCCTCTCCTGACCCACTGATATGTCAAGCTGGTGAAGCCTGCAGTCGCACATCTGAGTTGGATCTGAAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| 3UTR CAA 90 bp | AGCCTTCAGATCCAACTCAGATGTGCGACTGCAGGCTTCACCAGCTaGACATATCAGTGGGTCAGGAGAGGCCTCAAGTACGACTATGAA | + |
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Preference number: 2 (lower is better) Translates to: SLQIQLRCATAGFTS*TYQWVRRGLKYDYE Trigger: TTCATAGTCGTACTTGAGGCCTCTCCTGACCCACTGATATGTCAAGCTGGTGAAGCCTGCAGTCGCACATCTGAGTTGGATCTGAAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| 3UTR TCA 72 bp | TCCAACTCAGATGTGCGACTGCAGGCTTCACCAGCTTaGCATATCAGTGGGTCAGGAGAGGCCTCAAGTACG | + |
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Preference number: 3 (lower is better) Translates to: SNSDVRLQASPA*HISGSGEASST Trigger: CGTACTTGAGGCCTCTCCTGACCCACTGATATGTCAAGCTGGTGAAGCCTGCAGTCGCACATCTGAGTTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS-3UTR CCA 90 bp | ACCAGCTTGACATATCAGTGGGTCAGGAGAGGCCTCAAGTACGACTATGAACTTCCTGCAGGAGGCCCCTaGGGTGTCCAGGGTGCGGAT | + |
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Preference number: 4 (lower is better) Translates to: TSLTYQWVRRGLKYDYELPAGGP*GVQGAD Trigger: ATCCGCACCCTGGACACCCCAGGGGCCTCCTGCAGG...AAGTTCATAGTCGTACTTGAGGCCTCTCCTGACCCACTGATATGTCAAGCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS-3UTR CCA 90 bp | ACATATCAGTGGGTCAGGAGAGGCCTCAAGTACGACTATGAACTTGAGTGCTTTCCTGCAGGAGGCCCCTaGGGTGTCCAGGGTGCGGAT | + |
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Preference number: 4 (lower is better) Translates to: TYQWVRRGLKYDYELECFPAGGP*GVQGAD Trigger: ATCCGCACCCTGGACACCCCAGGGGCCTCCTGCAGG...AAAGCACTCAAGTTCATAGTCGTACTTGAGGCCTCTCCTGACCCACTGATATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS-3UTR GCA 90 bp | TGCAGGCTTCACCAGCTTGACATATCAGTGGGTCAGGAGAGGCCTCAAGTACGAGTCCACTGCCAATGTTaGCCAGGTCGACCACATAGT | + |
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Preference number: 4 (lower is better) Translates to: CRLHQLDISVGQERPQVRVHCQC*PGRPHS Trigger: ACTATGTGGTCGACCTGGGCAACATTGGCAGTGGAC...TCGTACTTGAGGCCTCTCCTGACCCACTGATATGTCAAGCTGGTGAAGCCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS-3UTR CCA 90 bp | CATATCAGTGGGTCAGGAGAGGCCTCAAGTACGACTATGAACTTGAGTGCTTTCCCACCTCTCAGATGCTaGTCGGCGGTCCAGGTTGGA | + |
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Preference number: 4 (lower is better) Translates to: HISGSGEASSTTMNLSAFPPLRC*SAVQVG Trigger: TCCAACCTGGACCGCCGACCAGCATCTGAGAGGTGG...GAAAGCACTCAAGTTCATAGTCGTACTTGAGGCCTCTCCTGACCCACTGATATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| 3UTR CAA 72 bp | ATCCAACTCAGATGTGCGACTGCAGGCTTCACCAGCTaGACATATCAGTGGGTCAGGAGAGGCCTCAAGTAC | + |
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Preference number: 4 (lower is better) Translates to: IQLRCATAGFTS*TYQWVRRGLKY Trigger: GTACTTGAGGCCTCTCCTGACCCACTGATATGTCAAGCTGGTGAAGCCTGCAGTCGCACATCTGAGTTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS-3UTR GCA 90 bp | ATCAGTGGGTCAGGAGAGGCCTCAAGTACGACTATGAACTTGAGTGCTTTCCGACTGGGGTGTCCAGGGTaGGGATGTTTCCATAGCATC | + |
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Preference number: 4 (lower is better) Translates to: ISGSGEASSTTMNLSAFRLGCPG*GCFHSI Trigger: GATGCTATGGAAACATCCGCACCCTGGACACCCCAG...TCGGAAAGCACTCAAGTTCATAGTCGTACTTGAGGCCTCTCCTGACCCACTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS-3UTR GCA 90 bp | GGCTTCACCAGCTTGACATATCAGTGGGTCAGGAGAGGCCTCAAGTACGACTATGTCCACTGCCAATGTTaGCCAGGTCGACCACATAGT | + |
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Preference number: 4 (lower is better) Translates to: GFTSLTYQWVRRGLKYDYVHCQC*PGRPHS Trigger: ACTATGTGGTCGACCTGGGCAACATTGGCAGTGGAC...ATAGTCGTACTTGAGGCCTCTCCTGACCCACTGATATGTCAAGCTGGTGAAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS-3UTR GCA 90 bp | ACCAGCTTGACATATCAGTGGGTCAGGAGAGGCCTCAAGTACGACTATGAACTTCCATCCCAAGTCCACTaGCAATGTTGCCCAGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TSLTYQWVRRGLKYDYELPSQVH*QCCPGR Trigger: TCGACCTGGGCAACATTGGCAGTGGACTTGGGATGG...AAGTTCATAGTCGTACTTGAGGCCTCTCCTGACCCACTGATATGTCAAGCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS-3UTR GCA 90 bp | ACCAGCTTGACATATCAGTGGGTCAGGAGAGGCCTCAAGTACGACTATGAACTTAGCATCCCCAACTGCTaGTTTCAGAGGAGCCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: TSLTYQWVRRGLKYDYELSIPNC*FQRSQS Trigger: TGACTGGCTCCTCTGAAAGCAGCAGTTGGGGATGCT...AAGTTCATAGTCGTACTTGAGGCCTCTCCTGACCCACTGATATGTCAAGCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS-3UTR GCA 90 bp | CATATCAGTGGGTCAGGAGAGGCCTCAAGTACGACTATGAACTTGAGTGCTTTCAGCATCCCCAACTGCTaGTTTCAGAGGAGCCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: HISGSGEASSTTMNLSAFSIPNC*FQRSQS Trigger: TGACTGGCTCCTCTGAAAGCAGCAGTTGGGGATGCT...GAAAGCACTCAAGTTCATAGTCGTACTTGAGGCCTCTCCTGACCCACTGATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS-3UTR GCA 90 bp | ACATATCAGTGGGTCAGGAGAGGCCTCAAGTACGACTATGAACTTGAGTGCTTTCTGGGGTGTCCAGGGTaGGGATGTTTCCATAGCATC | + |
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Preference number: 4 (lower is better) Translates to: TYQWVRRGLKYDYELECFLGCPG*GCFHSI Trigger: GATGCTATGGAAACATCCGCACCCTGGACACCCCAG...AAAGCACTCAAGTTCATAGTCGTACTTGAGGCCTCTCCTGACCCACTGATATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS-3UTR GCA 90 bp | TGCAGGCTTCACCAGCTTGACATATCAGTGGGTCAGGAGAGGCCTCAAGTACGAGACACCAGCGATCACTaGAGGATCCATACAGTATTT | + |
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Preference number: 4 (lower is better) Translates to: CRLHQLDISVGQERPQVRDTSDH*RIHTVF Trigger: AAATACTGTATGGATCCTGCAGTGATCGCTGGTGTC...TCGTACTTGAGGCCTCTCCTGACCCACTGATATGTCAAGCTGGTGAAGCCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS-3UTR GCA 90 bp | ACATATCAGTGGGTCAGGAGAGGCCTCAAGTACGACTATGAACTTGAGTGCTTTCCATCCCAAGTCCACTaGCAATGTTGCCCAGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TYQWVRRGLKYDYELECFPSQVH*QCCPGR Trigger: TCGACCTGGGCAACATTGGCAGTGGACTTGGGATGG...AAAGCACTCAAGTTCATAGTCGTACTTGAGGCCTCTCCTGACCCACTGATATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS-3UTR CCA 90 bp | TTGACATATCAGTGGGTCAGGAGAGGCCTCAAGTACGACTATGAACTTGAGTGCGTCGGCGGTCCAGGTTaGAAACCTAGTCTTGATCTC | + |
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Preference number: 4 (lower is better) Translates to: LTYQWVRRGLKYDYELECVGGPG*KPSLDL Trigger: GAGATCAAGACTAGGTTTCCAACCTGGACCGCCGAC...GCACTCAAGTTCATAGTCGTACTTGAGGCCTCTCCTGACCCACTGATATGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS-3UTR CCA 90 bp | TGCAGGCTTCACCAGCTTGACATATCAGTGGGTCAGGAGAGGCCTCAAGTACGATCACAGTTCAGGTCCTaGTTGCTTCGGACAAAGTTA | + |
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Preference number: 4 (lower is better) Translates to: CRLHQLDISVGQERPQVRSQFRS*LLRTKL Trigger: TAACTTTGTCCGAAGCAACCAGGACCTGAACTGTGA...TCGTACTTGAGGCCTCTCCTGACCCACTGATATGTCAAGCTGGTGAAGCCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS-3UTR CCA 90 bp | TGCAGGCTTCACCAGCTTGACATATCAGTGGGTCAGGAGAGGCCTCAAGTACGATCCATACAGTATTTCTaGCCAACAAGTCTCATGGTG | + |
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Preference number: 4 (lower is better) Translates to: CRLHQLDISVGQERPQVRSIQYF*PTSLMV Trigger: CACCATGAGACTTGTTGGCCAGAAATACTGTATGGA...TCGTACTTGAGGCCTCTCCTGACCCACTGATATGTCAAGCTGGTGAAGCCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS-3UTR CCA 90 bp | GGCTTCACCAGCTTGACATATCAGTGGGTCAGGAGAGGCCTCAAGTACGACTATTCACAGTTCAGGTCCTaGTTGCTTCGGACAAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: GFTSLTYQWVRRGLKYDYSQFRS*LLRTKL Trigger: TAACTTTGTCCGAAGCAACCAGGACCTGAACTGTGA...ATAGTCGTACTTGAGGCCTCTCCTGACCCACTGATATGTCAAGCTGGTGAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS-3UTR TCA 90 bp | TTGACATATCAGTGGGTCAGGAGAGGCCTCAAGTACGACTATGAACTTGAGTGCCTAGATGTCAGAGTCTaGGTTTTCTGGGAAACCCAG | + |
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Preference number: 4 (lower is better) Translates to: LTYQWVRRGLKYDYELECLDVRV*VFWETQ Trigger: CTGGGTTTCCCAGAAAACTCAGACTCTGACATCTAG...GCACTCAAGTTCATAGTCGTACTTGAGGCCTCTCCTGACCCACTGATATGTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS-3UTR TCA 90 bp | ACATATCAGTGGGTCAGGAGAGGCCTCAAGTACGACTATGAACTTGAGTGCTTTCTAGATGTCAGAGTCTaGGTTTTCTGGGAAACCCAG | + |
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Preference number: 4 (lower is better) Translates to: TYQWVRRGLKYDYELECFLDVRV*VFWETQ Trigger: CTGGGTTTCCCAGAAAACTCAGACTCTGACATCTAG...AAAGCACTCAAGTTCATAGTCGTACTTGAGGCCTCTCCTGACCCACTGATATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS-3UTR CCA 90 bp | AGCTTGACATATCAGTGGGTCAGGAGAGGCCTCAAGTACGACTATGAACTTGAGTCCATACAGTATTTCTaGCCAACAAGTCTCATGGTG | + |
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Preference number: 4 (lower is better) Translates to: SLTYQWVRRGLKYDYELESIQYF*PTSLMV Trigger: CACCATGAGACTTGTTGGCCAGAAATACTGTATGGA...CTCAAGTTCATAGTCGTACTTGAGGCCTCTCCTGACCCACTGATATGTCAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS GCA 90 bp | AGGCACGGACTCCGCAATAGGTCAGGCCGTAGCGTCTTCCAATCCTaGAGGAGGCCCCTGGGGTGTCCAGGGTGCGGATGTTTCCATAGC | + |
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Preference number: 5 (lower is better) Translates to: RHGLRNRSGRSVFQS*RRPLGCPGCGCFHS Trigger: GCTATGGAAACATCCGCACCCTGGACACCCCAGGGGCCTCCTGCAGGATTGGAAGACGCTACGGCCTGACCTATTGCGGAGTCCGTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114894.2 |
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| CDS GCA 90 bp | CTGGGGTGTCCAGGGTGCGGATGTTTCCATAGCATCCCCAACTGCTaGTTTCAGAGGAGCCAGTCAGGGCCAGGAGGCCTAGAAGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: LGCPGCGCFHSIPNC*FQRSQSGPGGLEAA Trigger: GGCTGCTTCTAGGCCTCCTGGCCCTGACTGGCTCCTCTGAAAGCAGCAGTTGGGGATGCTATGGAAACATCCGCACCCTGGACACCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS GCA 90 bp | AGGCACGGATACCGCAATAGGTCAGGCCGTAGCGTCTTCCAATCCTaGAGGAGGCCCCTGGGGTGTCCAGGGTGCGGATGTTTCCATAGC | + |
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Preference number: 5 (lower is better) Translates to: RHGYRNRSGRSVFQS*RRPLGCPGCGCFHS Trigger: GCTATGGAAACATCCGCACCCTGGACACCCCAGGGGCCTCCTGCAGGATTGGAAGACGCTACGGCCTGACCTATTGCGGTATCCGTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027254.10 |
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| CDS CCA 90 bp | GCAATAGGTCAGGCCGTAGCGTCTTCCAATCCTGCAGGAGGCCCCTaGGGTGTCCAGGGTGCGGATGTTTCCATAGCATCCCCAACTGCT | + |
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Preference number: 5 (lower is better) Translates to: AIGQAVASSNPAGGP*GVQGADVSIASPTA Trigger: AGCAGTTGGGGATGCTATGGAAACATCCGCACCCTGGACACCCCAGGGGCCTCCTGCAGGATTGGAAGACGCTACGGCCTGACCTATTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS GCA 90 bp | CCATCCCAAGTCCACTGCCAATGTTGCCCAGGTCGACCACATAGTTaGCTCCTGGAGACTCTCTTGACAGGACACCAGCGATCACTGCAG | + |
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Preference number: 5 (lower is better) Translates to: PSQVHCQCCPGRPHS*LLETLLTGHQRSLQ Trigger: CTGCAGTGATCGCTGGTGTCCTGTCAAGAGAGTCTCCAGGAGGCAACTATGTGGTCGACCTGGGCAACATTGGCAGTGGACTTGGGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS-3UTR CAA 90 bp | GCGACTGCAGGCTTCACCAGCTTGACATATCAGTGGGTCAGGAGAGGCCTCAAGAAGTCTCATGGTGGGTaGATGTCTCAGAAGATATGG | + |
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Preference number: 5 (lower is better) Translates to: ATAGFTSLTYQWVRRGLKKSHGG*MSQKIW Trigger: CCATATCTTCTGAGACATCAACCCACCATGAGACTT...CTTGAGGCCTCTCCTGACCCACTGATATGTCAAGCTGGTGAAGCCTGCAGTCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS TCA 90 bp | AATGTTGCCCAGGTCGACCACATAGTTGCCTCCTGGAGACTCTCTTaGCAGGACACCAGCGATCACTGCAGGATCCATACAGTATTTCTG | + |
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Preference number: 5 (lower is better) Translates to: NVAQVDHIVASWRLS*QDTSDHCRIHTVFL Trigger: CAGAAATACTGTATGGATCCTGCAGTGATCGCTGGTGTCCTGTCAAGAGAGTCTCCAGGAGGCAACTATGTGGTCGACCTGGGCAACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS GCA 90 bp | GGTAGAATTTTGTCTCCTTCACCATCCCAAGTCCACTGCCAATGTTaGCCAGGTCGACCACATAGTTGCCTCCTGGAGACTCTCTTGACA | + |
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Preference number: 5 (lower is better) Translates to: GRILSPSPSQVHCQC*PGRPHSCLLETLLT Trigger: TGTCAAGAGAGTCTCCAGGAGGCAACTATGTGGTCGACCTGGGCAACATTGGCAGTGGACTTGGGATGGTGAAGGAGACAAAATTCTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS CCA 90 bp | GAGTCTGAGTTTTCTGGGAAACCCAGGTCTCACTCTTCCAAGCTGTaGGAGGGTAGAATTTTGTCTCCTTCACCATCCCAAGTCCACTGC | + |
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Preference number: 5 (lower is better) Translates to: ESEFSGKPRSHSSKL*EGRILSPSPSQVHC Trigger: GCAGTGGACTTGGGATGGTGAAGGAGACAAAATTCTACCCTCCCACAGCTTGGAAGAGTGAGACCTGGGTTTCCCAGAAAACTCAGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS-3UTR CAA 90 bp | ACCAGCTTGACATATCAGTGGGTCAGGAGAGGCCTCAAGTACGACTATGAACTTCTCCTGGAGACTCTCTaGACAGGACACCAGCGATCA | + |
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Preference number: 5 (lower is better) Translates to: TSLTYQWVRRGLKYDYELLLETL*TGHQRS Trigger: TGATCGCTGGTGTCCTGTCAAGAGAGTCTCCAGGAG...AAGTTCATAGTCGTACTTGAGGCCTCTCCTGACCCACTGATATGTCAAGCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS-3UTR CAA 90 bp | CATATCAGTGGGTCAGGAGAGGCCTCAAGTACGACTATGAACTTGAGTGCTTTCCTCCTGGAGACTCTCTaGACAGGACACCAGCGATCA | + |
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Preference number: 5 (lower is better) Translates to: HISGSGEASSTTMNLSAFLLETL*TGHQRS Trigger: TGATCGCTGGTGTCCTGTCAAGAGAGTCTCCAGGAG...GAAAGCACTCAAGTTCATAGTCGTACTTGAGGCCTCTCCTGACCCACTGATATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS TCA 90 bp | GCAGGATCCATACAGTATTTCTGGCCAACAAGTCTCATGGTGGGTTaGTGTCTCAGAAGATATGGCCTGTCAACTTCGGCCAGCCGTTCA | + |
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Preference number: 5 (lower is better) Translates to: AGSIQYFWPTSLMVG*CLRRYGLSTSASRS Trigger: TGAACGGCTGGCCGAAGTTGACAGGCCATATCTTCTGAGACATCAACCCACCATGAGACTTGTTGGCCAGAAATACTGTATGGATCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS CCA 90 bp | TCACTGCAGGATCCATACAGTATTTCTGGCCAACAAGTCTCATGGTaGGTTGATGTCTCAGAAGATATGGCCTGTCAACTTCGGCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: SLQDPYSISGQQVSW*VDVSEDMACQLRPA Trigger: GGCTGGCCGAAGTTGACAGGCCATATCTTCTGAGACATCAACCCACCATGAGACTTGTTGGCCAGAAATACTGTATGGATCCTGCAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS-3UTR CAA 90 bp | GCGACTGCAGGCTTCACCAGCTTGACATATCAGTGGGTCAGGAGAGGCCTCAAGGTTGGAAACCTAGTCTaGATCTCTTTGATGCTAGAT | + |
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Preference number: 5 (lower is better) Translates to: ATAGFTSLTYQWVRRGLKVGNLV*ISLMLD Trigger: ATCTAGCATCAAAGAGATCAAGACTAGGTTTCCAAC...CTTGAGGCCTCTCCTGACCCACTGATATGTCAAGCTGGTGAAGCCTGCAGTCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS CCA 90 bp | CGATCACTGCAGGATCCATACAGTATTTCTGGCCAACAAGTCTCATaGTGGGTTGATGTCTCAGAAGATATGGCCTGTCAACTTCGGCCA | + |
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Preference number: 5 (lower is better) Translates to: RSLQDPYSISGQQVS*WVDVSEDMACQLRP Trigger: TGGCCGAAGTTGACAGGCCATATCTTCTGAGACATCAACCCACCATGAGACTTGTTGGCCAGAAATACTGTATGGATCCTGCAGTGATCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS-3UTR CAA 90 bp | ACCAGCTTGACATATCAGTGGGTCAGGAGAGGCCTCAAGTACGACTATGAACTTCAGTTCAGGTCCTGGTaGCTTCGGACAAAGTTAGGA | + |
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Preference number: 5 (lower is better) Translates to: TSLTYQWVRRGLKYDYELQFRSW*LRTKLG Trigger: TCCTAACTTTGTCCGAAGCAACCAGGACCTGAACTG...AAGTTCATAGTCGTACTTGAGGCCTCTCCTGACCCACTGATATGTCAAGCTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS-3UTR CAA 90 bp | CATATCAGTGGGTCAGGAGAGGCCTCAAGTACGACTATGAACTTGAGTGCTTTCCAGTTCAGGTCCTGGTaGCTTCGGACAAAGTTAGGA | + |
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Preference number: 5 (lower is better) Translates to: HISGSGEASSTTMNLSAFQFRSW*LRTKLG Trigger: TCCTAACTTTGTCCGAAGCAACCAGGACCTGAACTG...GAAAGCACTCAAGTTCATAGTCGTACTTGAGGCCTCTCCTGACCCACTGATATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS-3UTR CAA 90 bp | TTCACCAGCTTGACATATCAGTGGGTCAGGAGAGGCCTCAAGTACGACTATGAAGTTGGAAACCTAGTCTaGATCTCTTTGATGCTAGAT | + |
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Preference number: 5 (lower is better) Translates to: FTSLTYQWVRRGLKYDYEVGNLV*ISLMLD Trigger: ATCTAGCATCAAAGAGATCAAGACTAGGTTTCCAAC...TTCATAGTCGTACTTGAGGCCTCTCCTGACCCACTGATATGTCAAGCTGGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS GCA 72 bp | CTCCGCAATAGGTCAGGCCGTAGCGTCTTCCAATCCTaGAGGAGGCCCCTGGGGTGTCCAGGGTGCGGATGT | + |
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Preference number: 6 (lower is better) Translates to: LRNRSGRSVFQS*RRPLGCPGCGC Trigger: ACATCCGCACCCTGGACACCCCAGGGGCCTCCTGCAGGATTGGAAGACGCTACGGCCTGACCTATTGCGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114894.2 |
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| CDS GCA 72 bp | TACCGCAATAGGTCAGGCCGTAGCGTCTTCCAATCCTaGAGGAGGCCCCTGGGGTGTCCAGGGTGCGGATGT | + |
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Preference number: 6 (lower is better) Translates to: YRNRSGRSVFQS*RRPLGCPGCGC Trigger: ACATCCGCACCCTGGACACCCCAGGGGCCTCCTGCAGGATTGGAAGACGCTACGGCCTGACCTATTGCGGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027254.10 |
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| CDS GCA 72 bp | CCAGGGTGCGGATGTTTCCATAGCATCCCCAACTGCTaGTTTCAGAGGAGCCAGTCAGGGCCAGGAGGCCTA | + |
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Preference number: 6 (lower is better) Translates to: PGCGCFHSIPNC*FQRSQSGPGGL Trigger: TAGGCCTCCTGGCCCTGACTGGCTCCTCTGAAAGCAGCAGTTGGGGATGCTATGGAAACATCCGCACCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS GCA 72 bp | GTCCACTGCCAATGTTGCCCAGGTCGACCACATAGTTaGCTCCTGGAGACTCTCTTGACAGGACACCAGCGA | + |
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Preference number: 6 (lower is better) Translates to: VHCQCCPGRPHS*LLETLLTGHQR Trigger: TCGCTGGTGTCCTGTCAAGAGAGTCTCCAGGAGGCAACTATGTGGTCGACCTGGGCAACATTGGCAGTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS TCA 72 bp | CAGGTCGACCACATAGTTGCCTCCTGGAGACTCTCTTaGCAGGACACCAGCGATCACTGCAGGATCCATACA | + |
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Preference number: 6 (lower is better) Translates to: QVDHIVASWRLS*QDTSDHCRIHT Trigger: TGTATGGATCCTGCAGTGATCGCTGGTGTCCTGTCAAGAGAGTCTCCAGGAGGCAACTATGTGGTCGACCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS GCA 72 bp | TTGTCTCCTTCACCATCCCAAGTCCACTGCCAATGTTaGCCAGGTCGACCACATAGTTGCCTCCTGGAGACT | + |
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Preference number: 6 (lower is better) Translates to: LSPSPSQVHCQC*PGRPHSCLLET Trigger: AGTCTCCAGGAGGCAACTATGTGGTCGACCTGGGCAACATTGGCAGTGGACTTGGGATGGTGAAGGAGACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS GCA 72 bp | GGTAGAATTTTGTCTCCTTCACCATCCCAAGTCCACTaGCAATGTTGCCCAGGTCGACCACATAGTTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: GRILSPSPSQVH*QCCPGRPHSCL Trigger: GAGGCAACTATGTGGTCGACCTGGGCAACATTGGCAGTGGACTTGGGATGGTGAAGGAGACAAAATTCTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS CCA 72 bp | GAGTCCACCTCTCAGATGCTGGTCGGCGGTCCAGGTTaGAAACCTAGTCTTGATCTCTTTGATGCTAGATGT | + |
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Preference number: 6 (lower is better) Translates to: ESTSQMLVGGPG*KPSLDLFDARC Trigger: ACATCTAGCATCAAAGAGATCAAGACTAGGTTTCCAACCTGGACCGCCGACCAGCATCTGAGAGGTGGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS CAA 72 bp | TGGTCCTTGAAGTATTTGGCTCGCGCAAGGACGTCATaGCAGAAATCACAGTTCAGGTCCTGGTTGCTTCGG | + |
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Preference number: 6 (lower is better) Translates to: WSLKYLARARTS*QKSQFRSWLLR Trigger: CCGAAGCAACCAGGACCTGAACTGTGATTTCTGCAATGACGTCCTTGCGCGAGCCAAATACTTCAAGGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS CAA 90 bp | TGCAGGATCCATACAGTATTTCTGGCCAACAAGTCTCATGGTGGGTaGATGTCTCAGAAGATATGGCCTGTCAACTTCGGCCAGCCGTTC | + |
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Preference number: 6 (lower is better) Translates to: CRIHTVFLANKSHGG*MSQKIWPVNFGQPF Trigger: GAACGGCTGGCCGAAGTTGACAGGCCATATCTTCTGAGACATCAACCCACCATGAGACTTGTTGGCCAGAAATACTGTATGGATCCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS CCA 72 bp | TTTTCTGGGAAACCCAGGTCTCACTCTTCCAAGCTGTaGGAGGGTAGAATTTTGTCTCCTTCACCATCCCAA | + |
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Preference number: 6 (lower is better) Translates to: FSGKPRSHSSKL*EGRILSPSPSQ Trigger: TTGGGATGGTGAAGGAGACAAAATTCTACCCTCCCACAGCTTGGAAGAGTGAGACCTGGGTTTCCCAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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| CDS TCA 72 bp | CTAGTCTTGATCTCTTTGATGCTAGATGTCAGAGTCTaGGTTTTCTGGGAAACCCAGGTCTCACTCTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: LVLISLMLDVRV*VFWETQVSLFQ Trigger: TTGGAAGAGTGAGACCTGGGTTTCCCAGAAAACTCAGACTCTGACATCTAGCATCAAAGAGATCAAGACTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027254.10 ENSMUST00000114894.2 |
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