RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LY86 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021423

Ensembl transcript IDs: ENSMUST00000021860.7

Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTTGGGTCTGGGAACATCTGTCCCTGGAGCTAAGATCGGAAGAGTaGCCCACAAGAAATTTCTTTGTAAAGCCTCTCTTGGTTATCAGT +
Preference number: 1 (lower is better)
Translates to: CWVWEHLSLELRSEE*PTRNFFVKPLLVIS
Trigger: ACTGATAACCAAGAGAGGCTTTACAAAGAAATTTCTTGTGGGTCACTCTTCCGATCTTAGCTCCAGGGACAGATGTTCCCAGACCCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
3UTR TCA 72 bp AGCCTCTCTTGGTTATCAGTGGTTCTTGCAGCTAGGTaGGTCCAGGGACCTTGGGGTCCCCTGAGATTGAGT +
Preference number: 3 (lower is better)
Translates to: SLSWLSVVLAAR*VQGPWGPLRLS
Trigger: ACTCAATCTCAGGGGACCCCAAGGTCCCTGGACTCACCTAGCTGCAAGAACCACTGATAACCAAGAGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
3UTR-3UTR CAA 90 bp CTTTGTAAAGCCTCTCTTGGTTATCAGTGGTTCTTGCAGCTAGGTGAGTCCAGGTGGGGTCCCCTGAGATaGAGTTTACTGTGCATTTCC +
Preference number: 3 (lower is better)
Translates to: LCKASLGYQWFLQLGESRWGPLR*SLLCIS
Trigger: GGAAATGCACAGTAAACTCAATCTCAGGGGACCCCA...CCTGGACTCACCTAGCTGCAAGAACCACTGATAACCAAGAGAGGCTTTACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
3UTR TCA 72 bp TGGGAACATCTGTCCCTGGAGCTAAGATCGGAAGAGTaGCCCACAAGAAATTTCTTTGTAAAGCCTCTCTTG +
Preference number: 3 (lower is better)
Translates to: WEHLSLELRSEE*PTRNFFVKPLL
Trigger: CAAGAGAGGCTTTACAAAGAAATTTCTTGTGGGTCACTCTTCCGATCTTAGCTCCAGGGACAGATGTTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
3UTR CCA 72 bp AAGAAATTTCTTTGTAAAGCCTCTCTTGGTTATCAGTaGTTCTTGCAGCTAGGTGAGTCCAGGGACCTTGGG +
Preference number: 3 (lower is better)
Translates to: KKFLCKASLGYQ*FLQLGESRDLG
Trigger: CCCAAGGTCCCTGGACTCACCTAGCTGCAAGAACCACTGATAACCAAGAGAGGCTTTACAAAGAAATTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
3UTR-3UTR CAA 90 bp GGAGCAGGCAAGGAAGTAGCTTTGATGAAACGTAATTACATAAGGAGAGGTACTGGTTTATTACATCTGTaGGGTCTGGGAACATCTGTC +
Preference number: 3 (lower is better)
Translates to: GAGKEVALMKRNYIRRGTGLLHL*GLGTSV
Trigger: GACAGATGTTCCCAGACCCAACAGATGTAATAAACC...AGTACCTCTCCTTATGTAATTACGTTTCATCAAAGCTACTTCCTTGCCTGCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
3UTR TCA 72 bp CAAGACTACTCAGGGTCCTCAGAAATAGATAGTTTTTaGGGGTTTATTACATCTGTTGGGTCTGGGAACATC +
Preference number: 3 (lower is better)
Translates to: QDYSGSSEIDSF*GFITSVGSGNI
Trigger: GATGTTCCCAGACCCAACAGATGTAATAAACCCTCAAAAACTATCTATTTCTGAGGACCCTGAGTAGTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
3UTR CAA 72 bp TTTCTTTGTAAAGCCTCTCTTGGTTATCAGTGGTTCTaGCAGCTAGGTGAGTCCAGGGACCTTGGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: FLCKASLGYQWF*QLGESRDLGVP
Trigger: GGGGACCCCAAGGTCCCTGGACTCACCTAGCTGCAAGAACCACTGATAACCAAGAGAGGCTTTACAAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
CDS-3UTR GCA 90 bp TTTTTACATCCCAGGCAACTTCAAGGAAGTGTTGCTAAGGAGCAGGCAAGGAAGCTGTTGCAGGCCGTGTaGTTGGGCCAACCATTTTCG +
Preference number: 4 (lower is better)
Translates to: FLHPRQLQGSVAKEQARKLLQAV*LGQPFS
Trigger: CGAAAATGGTTGGCCCAAGCACACGGCCTGCAACAG...CTTCCTTGCCTGCTCCTTAGCAACACTTCCTTGAAGTTGCCTGGGATGTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
CDS-3UTR CCA 90 bp AACTTCAAGGAAGTGTTGCTAAGGAGCAGGCAAGGAAGTAGCTTTGATGAAACGAATGAGAACTTGGGCTaGTCCTCCTCACAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: NFKEVLLRSRQGSSFDETNENLG*SSSQRG
Trigger: TCCCCTTTGTGAGGAGGACCAGCCCAAGTTCTCATT...CGTTTCATCAAAGCTACTTCCTTGCCTGCTCCTTAGCAACACTTCCTTGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
CDS-3UTR CCA 90 bp GGAGCAGGCAAGGAAGTAGCTTTGATGAAACGTAATTACATAAGGAGAGGTACTCACAGAATGAGAACTTaGGCTGGTCCTCCTCACAAA +
Preference number: 4 (lower is better)
Translates to: GAGKEVALMKRNYIRRGTHRMRT*AGPPHK
Trigger: TTTGTGAGGAGGACCAGCCCAAGTTCTCATTCTGTG...AGTACCTCTCCTTATGTAATTACGTTTCATCAAAGCTACTTCCTTGCCTGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
CDS-3UTR TCA 90 bp GGTACTACAATAGGGCTTCAAGACTACTCAGGGTCCTCAGAAATAGATAGTTTTAGTTCCAGCAAGAGCTaGTATTCTCCCTGTGGAACA +
Preference number: 4 (lower is better)
Translates to: GTTIGLQDYSGSSEIDSFSSSKS*YSPCGT
Trigger: TGTTCCACAGGGAGAATATCAGCTCTTGCTGGAACT...AAAACTATCTATTTCTGAGGACCCTGAGTAGTCTTGAAGCCCTATTGTAGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
CDS-3UTR CCA 90 bp GCTAAGATCGGAAGAGTGACCCACAAGAAATTTCTTTGTAAAGCCTCTCTTGGTTGGAACACTGGTCAATaGAAAGGCCAAAATCCTGTA +
Preference number: 4 (lower is better)
Translates to: AKIGRVTHKKFLCKASLGWNTGQ*KGQNPV
Trigger: TACAGGATTTTGGCCTTTCCATTGACCAGTGTTCCA...ACCAAGAGAGGCTTTACAAAGAAATTTCTTGTGGGTCACTCTTCCGATCTTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
CDS-3UTR CCA 90 bp ACATCTGTCCCTGGAGCTAAGATCGGAAGAGTGACCCACAAGAAATTTCTTTGTTTGATTGGATCTGCTTaGAACACTGGTCAATGGAAA +
Preference number: 4 (lower is better)
Translates to: TSVPGAKIGRVTHKKFLCLIGSA*NTGQWK
Trigger: TTTCCATTGACCAGTGTTCCAAGCAGATCCAATCAA...ACAAAGAAATTTCTTGTGGGTCACTCTTCCGATCTTAGCTCCAGGGACAGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
CDS-3UTR CCA 90 bp GCTAAGATCGGAAGAGTGACCCACAAGAAATTTCTTTGTAAAGCCTCTCTTGGTATGTTGAGATTTGATTaGATCTGCTTGGAACACTGG +
Preference number: 4 (lower is better)
Translates to: AKIGRVTHKKFLCKASLGMLRFD*ICLEHW
Trigger: CCAGTGTTCCAAGCAGATCCAATCAAATCTCAACAT...ACCAAGAGAGGCTTTACAAAGAAATTTCTTGTGGGTCACTCTTCCGATCTTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
CDS-3UTR TCA 90 bp GGAGCAGGCAAGGAAGTAGCTTTGATGAAACGTAATTACATAAGGAGAGGTACTTCTAATGTTGAGATTTaGTTGGATCTGCTTGGAACA +
Preference number: 4 (lower is better)
Translates to: GAGKEVALMKRNYIRRGTSNVEI*LDLLGT
Trigger: TGTTCCAAGCAGATCCAATCAAATCTCAACATTAGA...AGTACCTCTCCTTATGTAATTACGTTTCATCAAAGCTACTTCCTTGCCTGCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
CDS-3UTR CAA 90 bp CCAGGCAACTTCAAGGAAGTGTTGCTAAGGAGCAGGCAAGGAAGTAGCTTTGATCCACAGAATGAGAACTaGGGCTGGTCCTCCTCACAA +
Preference number: 5 (lower is better)
Translates to: PGNFKEVLLRSRQGSSFDPQNEN*GWSSSQ
Trigger: TTGTGAGGAGGACCAGCCCAAGTTCTCATTCTGTGG...ATCAAAGCTACTTCCTTGCCTGCTCCTTAGCAACACTTCCTTGAAGTTGCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
CDS TCA 90 bp AGGGCCGGCATAGTATATCTGTTCTCCTTTTCTTCTTCCACAGAATaGGAACTTGGGCTGGTCCTCCTCACAAAGGGGATAGGAGTAGTT +
Preference number: 5 (lower is better)
Translates to: RAGIVYLFSFSSSTE*ELGLVLLTKGIGVV
Trigger: AACTACTCCTATCCCCTTTGTGAGGAGGACCAGCCCAAGTTCTCATTCTGTGGAAGAAGAAAAGGAGAACAGATATACTATGCCGGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
CDS TCA 90 bp GCAAGAGCTGATATTCTCCCTGTGGAACATCAAGTCCAGGGTTATTaGCAGGGCCGGCATAGTATATCTGTTCTCCTTTTCTTCTTCCAC +
Preference number: 5 (lower is better)
Translates to: ARADILPVEHQVQGY*QGRHSISVLLFFFH
Trigger: GTGGAAGAAGAAAAGGAGAACAGATATACTATGCCGGCCCTGTCAATAACCCTGGACTTGATGTTCCACAGGGAGAATATCAGCTCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
CDS-3UTR CAA 90 bp CTTTGTAAAGCCTCTCTTGGTTATCAGTGGTTCTTGCAGCTAGGTGAGTCCAGGTTTGATTGGATCTGCTaGGAACACTGGTCAATGGAA +
Preference number: 5 (lower is better)
Translates to: LCKASLGYQWFLQLGESRFDWIC*EHWSME
Trigger: TTCCATTGACCAGTGTTCCAAGCAGATCCAATCAAA...CCTGGACTCACCTAGCTGCAAGAACCACTGATAACCAAGAGAGGCTTTACAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
CDS-3UTR CAA 90 bp TTTTTACATCCCAGGCAACTTCAAGGAAGTGTTGCTAAGGAGCAGGCAAGGAAGATGCCAAATCTAATGTaGAGATTTGATTGGATCTGC +
Preference number: 5 (lower is better)
Translates to: FLHPRQLQGSVAKEQARKMPNLM*RFDWIC
Trigger: GCAGATCCAATCAAATCTCAACATTAGATTTGGCAT...CTTCCTTGCCTGCTCCTTAGCAACACTTCCTTGAAGTTGCCTGGGATGTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
CDS GCA 90 bp TGTCTCAGAATGATGCCAAATCTAATGTTGAGATTTGATTGGATCTaGTTGGAACACTGGTCAATGGAAAGGCCAAAATCCTGTAAGGGA +
Preference number: 5 (lower is better)
Translates to: CLRMMPNLMLRFDWI*LEHWSMERPKSCKG
Trigger: TCCCTTACAGGATTTTGGCCTTTCCATTGACCAGTGTTCCAAGCAGATCCAATCAAATCTCAACATTAGATTTGGCATCATTCTGAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
CDS TCA 90 bp TCTGATATCCTGTCTCAGAATGATGCCAAATCTAATGTTGAGATTTaGTTGGATCTGCTTGGAACACTGGTCAATGGAAAGGCCAAAATC +
Preference number: 5 (lower is better)
Translates to: SDILSQNDAKSNVEI*LDLLGTLVNGKAKI
Trigger: GATTTTGGCCTTTCCATTGACCAGTGTTCCAAGCAGATCCAATCAAATCTCAACATTAGATTTGGCATCATTCTGAGACAGGATATCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
CDS CCA 90 bp ATATCCTGTCTCAGAATGATGCCAAATCTAATGTTGAGATTTGATTaGATCTGCTTGGAACACTGGTCAATGGAAAGGCCAAAATCCTGT +
Preference number: 5 (lower is better)
Translates to: ISCLRMMPNLMLRFD*ICLEHWSMERPKSC
Trigger: ACAGGATTTTGGCCTTTCCATTGACCAGTGTTCCAAGCAGATCCAATCAAATCTCAACATTAGATTTGGCATCATTCTGAGACAGGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
CDS CAA 72 bp ACTACTTCCAAGCCCCCACTGTTGCAGGCCGTGTGCTaGGGCCAACCATTTTCGCTGCCATGGTCACTGCTG +
Preference number: 6 (lower is better)
Translates to: TTSKPPLLQAVC*GQPFSLPWSLL
Trigger: CAGCAGTGACCATGGCAGCGAAAATGGTTGGCCCAAGCACACGGCCTGCAACAGTGGGGGCTTGGAAGTAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
CDS CCA 72 bp CAGGCCGTGTGCTTGGGCCAACCATTTTCGCTGCCATaGTCACTGCTGCTCGGAGAAGTCAGAATCCACACA +
Preference number: 6 (lower is better)
Translates to: QAVCLGQPFSLP*SLLLGEVRIHT
Trigger: TGTGTGGATTCTGACTTCTCCGAGCAGCAGTGACCATGGCAGCGAAAATGGTTGGCCCAAGCACACGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
CDS TCA 72 bp GTAGCACGGTTTTCATTGTACAGTTCCAGCAAGAGCTaGTATTCTCCCTGTGGAACATCAAGTCCAGGGTTA +
Preference number: 6 (lower is better)
Translates to: VARFSLYSSSKS*YSPCGTSSPGL
Trigger: TAACCCTGGACTTGATGTTCCACAGGGAGAATATCAGCTCTTGCTGGAACTGTACAATGAAAACCGTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
CDS CCA 72 bp CTCAGAATGATGCCAAATCTAATGTTGAGATTTGATTaGATCTGCTTGGAACACTGGTCAATGGAAAGGCCA +
Preference number: 6 (lower is better)
Translates to: LRMMPNLMLRFD*ICLEHWSMERP
Trigger: TGGCCTTTCCATTGACCAGTGTTCCAAGCAGATCCAATCAAATCTCAACATTAGATTTGGCATCATTCTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
CDS CAA 90 bp CTCAGAATGATGCCAAATCTAATGTTGAGATTTGATTGGATCTGCTaGGAACACTGGTCAATGGAAAGGCCAAAATCCTGTAAGGGATCA +
Preference number: 6 (lower is better)
Translates to: LRMMPNLMLRFDWIC*EHWSMERPKSCKGS
Trigger: TGATCCCTTACAGGATTTTGGCCTTTCCATTGACCAGTGTTCCAAGCAGATCCAATCAAATCTCAACATTAGATTTGGCATCATTCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
CDS CAA 90 bp AACAGCTTTCTGATATCCTGTCTCAGAATGATGCCAAATCTAATGTaGAGATTTGATTGGATCTGCTTGGAACACTGGTCAATGGAAAGG +
Preference number: 6 (lower is better)
Translates to: NSFLISCLRMMPNLM*RFDWICLEHWSMER
Trigger: CCTTTCCATTGACCAGTGTTCCAAGCAGATCCAATCAAATCTCAACATTAGATTTGGCATCATTCTGAGACAGGATATCAGAAAGCTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
CDS GCA 72 bp ATGATGCCAAATCTAATGTTGAGATTTGATTGGATCTaGTTGGAACACTGGTCAATGGAAAGGCCAAAATCC +
Preference number: 6 (lower is better)
Translates to: MMPNLMLRFDWI*LEHWSMERPKS
Trigger: GGATTTTGGCCTTTCCATTGACCAGTGTTCCAAGCAGATCCAATCAAATCTCAACATTAGATTTGGCATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7
CDS CAA 72 bp CTGATATCCTGTCTCAGAATGATGCCAAATCTAATGTaGAGATTTGATTGGATCTGCTTGGAACACTGGTCA +
Preference number: 6 (lower is better)
Translates to: LISCLRMMPNLM*RFDWICLEHWS
Trigger: TGACCAGTGTTCCAAGCAGATCCAATCAAATCTCAACATTAGATTTGGCATCATTCTGAGACAGGATATCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021860.7