Pregenerated sensors for LY6L (Mus musculus)

Ensembl gene IDs: ENSMUSG00000093626

Ensembl transcript IDs: ENSMUST00000177479.2

Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GGCCTGGAGAACCTTGAAGCACTCGAAGCAGCTCAGGTTTTGGGCTaGTACCTCGTTGACCATCATGCCTCCGGTGAGCTCCATAGACAC	+
Preference number: 5 (lower is better) Translates to: GLENLEALEAAQVLG*YLVDHHASGELHRH Trigger: GTGTCTATGGAGCTCACCGGAGGCATGATGGTCAACGAGGTACCAGCCCAAAACCTGAGCTGCTTCGAGTGCTTCAAGGTTCTCCAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177479.2
CDS CCA 90 bp	TTGCTGGCCTGGAGAACCTTGAAGCACTCGAAGCAGCTCAGGTTTTaGGCTGGTACCTCGTTGACCATCATGCCTCCGGTGAGCTCCATA	+
Preference number: 5 (lower is better) Translates to: LLAWRTLKHSKQLRF*AGTSLTIMPPVSSI Trigger: TATGGAGCTCACCGGAGGCATGATGGTCAACGAGGTACCAGCCCAAAACCTGAGCTGCTTCGAGTGCTTCAAGGTTCTCCAGGCCAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177479.2
CDS CAA 90 bp	ACCTTGAAGCACTCGAAGCAGCTCAGGTTTTGGGCTGGTACCTCGTaGACCATCATGCCTCCGGTGAGCTCCATAGACACCAGCGATGCC	+
Preference number: 6 (lower is better) Translates to: TLKHSKQLRFWAGTS*TIMPPVSSIDTSDA Trigger: GGCATCGCTGGTGTCTATGGAGCTCACCGGAGGCATGATGGTCAACGAGGTACCAGCCCAAAACCTGAGCTGCTTCGAGTGCTTCAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177479.2
CDS CAA 90 bp	CTTGCTGGCCTGGAGAACCTTGAAGCACTCGAAGCAGCTCAGGTTTaGGGCTGGTACCTCGTTGACCATCATGCCTCCGGTGAGCTCCAT	+
Preference number: 6 (lower is better) Translates to: LAGLENLEALEAAQV*GWYLVDHHASGELH Trigger: ATGGAGCTCACCGGAGGCATGATGGTCAACGAGGTACCAGCCCAAAACCTGAGCTGCTTCGAGTGCTTCAAGGTTCTCCAGGCCAGCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177479.2
CDS CAA 72 bp	CACTCGAAGCAGCTCAGGTTTTGGGCTGGTACCTCGTaGACCATCATGCCTCCGGTGAGCTCCATAGACACC	+
Preference number: 6 (lower is better) Translates to: HSKQLRFWAGTS*TIMPPVSSIDT Trigger: GGTGTCTATGGAGCTCACCGGAGGCATGATGGTCAACGAGGTACCAGCCCAAAACCTGAGCTGCTTCGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177479.2
CDS CAA 72 bp	AAGGACCAGAACCCCTCCCAACTCCCAGGTGCTCTGTaGCAGCGATCCCCAGAACAGCATCTTCTGGTGATC	+
Preference number: 6 (lower is better) Translates to: KDQNPSQLPGAL*QRSPEQHLLVI Trigger: GATCACCAGAAGATGCTGTTCTGGGGATCGCTGCAACAGAGCACCTGGGAGTTGGGAGGGGTTCTGGTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177479.2
CDS CCA 72 bp	AACCTTGAAGCACTCGAAGCAGCTCAGGTTTTGGGCTaGTACCTCGTTGACCATCATGCCTCCGGTGAGCTC	+
Preference number: 6 (lower is better) Translates to: NLEALEAAQVLG*YLVDHHASGEL Trigger: GAGCTCACCGGAGGCATGATGGTCAACGAGGTACCAGCCCAAAACCTGAGCTGCTTCGAGTGCTTCAAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177479.2
CDS CCA 72 bp	TGGAGAACCTTGAAGCACTCGAAGCAGCTCAGGTTTTaGGCTGGTACCTCGTTGACCATCATGCCTCCGGTG	+
Preference number: 6 (lower is better) Translates to: WRTLKHSKQLRF*AGTSLTIMPPV Trigger: CACCGGAGGCATGATGGTCAACGAGGTACCAGCCCAAAACCTGAGCTGCTTCGAGTGCTTCAAGGTTCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177479.2
CDS CAA 72 bp	CTGGAGAACCTTGAAGCACTCGAAGCAGCTCAGGTTTaGGGCTGGTACCTCGTTGACCATCATGCCTCCGGT	+
Preference number: 6 (lower is better) Translates to: LENLEALEAAQV*GWYLVDHHASG Trigger: ACCGGAGGCATGATGGTCAACGAGGTACCAGCCCAAAACCTGAGCTGCTTCGAGTGCTTCAAGGTTCTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177479.2
CDS TCA 72 bp	ACTCTATGGGGTGACACTTGCTGGCCTGGAGAACCTTaGAGCACTCGAAGCAGCTCAGGTTTTGGGCTGGTA	+
Preference number: 6 (lower is better) Translates to: TLWGDTCWPGEP*STRSSSGFGLV Trigger: TACCAGCCCAAAACCTGAGCTGCTTCGAGTGCTTCAAGGTTCTCCAGGCCAGCAAGTGTCACCCCATAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177479.2
CDS TCA 72 bp	CTCTGTTGCAGCGATCCCCAGAACAGCATCTTCTGGTaGTCCTGGCCTGAGTATTGCCCAATGACCATTCAA	+
Preference number: 6 (lower is better) Translates to: LCCSDPQNSIFW*SWPEYCPMTIQ Trigger: TTGAATGGTCATTGGGCAATACTCAGGCCAGGATCACCAGAAGATGCTGTTCTGGGGATCGCTGCAACAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177479.2
CDS TCA 72 bp	CGATCCCCAGAACAGCATCTTCTGGTGATCCTGGCCTaGGTATTGCCCAATGACCATTCAATGACATTATTG	+
Preference number: 6 (lower is better) Translates to: RSPEQHLLVILA*VLPNDHSMTLL Trigger: CAATAATGTCATTGAATGGTCATTGGGCAATACTCAGGCCAGGATCACCAGAAGATGCTGTTCTGGGGATCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177479.2