Pregenerated sensors for LY6H (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022577Ensembl transcript IDs: ENSMUST00000023241.12, ENSMUST00000065417.15, ENSMUST00000126129.8, ENSMUST00000127095.8, ENSMUST00000156032.2, ENSMUST00000163116.8
Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAAGCGCACACCCAGGATCTAGGGAGGTTGAGAGCCTCAGACCTTaGTGCCAAACCCTTGCTGTCCCAGCCCCAGCCAGGCCAGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: GSAHPGSREVESLRP*CQTLAVPAPARPGW Trigger: CCAGCCTGGCCTGGCTGGGGCTGGGACAGCAAGGGTTTGGCATCAAGGTCTGAGGCTCTCAACCTCCCTAGATCCTGGGTGTGCGCTTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
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| 3UTR CCA 90 bp | TTCTCTGTAGTTAATGCCCCTCAGGCCAGGCTGTTGGGCTGTCCCTaGCTTGACCTCCCTCCCCTTGGAGACCTGGAGGGTCTCAGTCCC | + |
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Preference number: 1 (lower is better) Translates to: FSVVNAPQARLLGCP*LDLPPLGDLEGLSP Trigger: GGGACTGAGACCCTCCAGGTCTCCAAGGGGAGGGAGGTCAAGCCAGGGACAGCCCAACAGCCTGGCCTGAGGGGCATTAACTACAGAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
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| 3UTR GCA 90 bp | CATACTGGAGACCTGTTCTGTGACTTGCGGGTGCTGCCAAGCCTCTaGCATTCCCACCAGATCTCTGGTCCTCATCTTCCAGGGGCCGCC | + |
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Preference number: 1 (lower is better) Translates to: HTGDLFCDLRVLPSL*HSHQISGPHLPGAA Trigger: GGCGGCCCCTGGAAGATGAGGACCAGAGATCTGGTGGGAATGGCAGAGGCTTGGCAGCACCCGCAAGTCACAGAACAGGTCTCCAGTATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
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| 3UTR GCA 90 bp | TGCTGGCTAGCTGCAGAAGACAGTCTCCTTCTGCCTGTCCTCAGATaGAGAGCTCCTGCTCCAGCGCCATGCCTGTCCACATGCTGCCAT | + |
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Preference number: 1 (lower is better) Translates to: CWLAAEDSLLLPVLR*RAPAPAPCLSTCCH Trigger: ATGGCAGCATGTGGACAGGCATGGCGCTGGAGCAGGAGCTCTGCATCTGAGGACAGGCAGAAGGAGACTGTCTTCTGCAGCTAGCCAGCA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
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| 3UTR CCA 90 bp | GGTCTTGTTGGAGGAAGTGTGTCACAGTTGGGGAGAGCCCCCTGCTaGCTAGCTGCAGAAGACAGTCTCCTTCTGCCTGTCCTCAGATGC | + |
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Preference number: 1 (lower is better) Translates to: GLVGGSVSQLGRAPC*LAAEDSLLLPVLRC Trigger: GCATCTGAGGACAGGCAGAAGGAGACTGTCTTCTGCAGCTAGCCAGCAGGGGGCTCTCCCCAACTGTGACACACTTCCTCCAACAAGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
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| 3UTR GCA 90 bp | CTGGAGACCTCCATACTGGAGACCTGTTCTGTGACTTGCGGGTGCTaGCAAGCCTCTGCCATTCCCACCAGATCTCTGGTCCTCATCTTC | + |
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Preference number: 1 (lower is better) Translates to: LETSILETCSVTCGC*QASAIPTRSLVLIF Trigger: GAAGATGAGGACCAGAGATCTGGTGGGAATGGCAGAGGCTTGGCAGCACCCGCAAGTCACAGAACAGGTCTCCAGTATGGAGGTCTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
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| 3UTR CCA 90 bp | CCCTTCTCCATTGCCCAAACCAGCGTCCATCTGAAGAGGTCATGCTaGGTGGTGGACACAAAGGCTCCTCGCTGGTACCTGGTGCAGATT | + |
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Preference number: 1 (lower is better) Translates to: PFSIAQTSVHLKRSC*VVDTKAPRWYLVQI Trigger: AATCTGCACCAGGTACCAGCGAGGAGCCTTTGTGTCCACCACCCAGCATGACCTCTTCAGATGGACGCTGGTTTGGGCAATGGAGAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
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| 3UTR GCA 90 bp | CCCCAGCTTCCTGCCAGGATGTCTGGACTCCTGGAGATATTCAGCTaGTTGGGATATGGAGCTGGTGGAGAAACGGAGAAGGCTCACTCA | + |
|
Preference number: 1 (lower is better) Translates to: PQLPARMSGLLEIFS*LGYGAGGETEKAHS Trigger: TGAGTGAGCCTTCTCCGTTTCTCCACCAGCTCCATATCCCAAGCAGCTGAATATCTCCAGGAGTCCAGACATCCTGGCAGGAAGCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
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| 3UTR GCA 90 bp | CTCCTTCTGCCTGTCCTCAGATGCAGAGCTCCTGCTCCAGCGCCATaGCTGTCCACATGCTGCCATGTTTCCCTCCATGATGATAATGGA | + |
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Preference number: 1 (lower is better) Translates to: LLLPVLRCRAPAPAP*LSTCCHVSLHDDNG Trigger: TCCATTATCATCATGGAGGGAAACATGGCAGCATGTGGACAGGCATGGCGCTGGAGCAGGAGCTCTGCATCTGAGGACAGGCAGAAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
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| 3UTR GCA 90 bp | AAACTGGAGACCTCCATACTGGAGACCTGTTCTGTGACTTGCGGGTaGTGCCAAGCCTCTGCCATTCCCACCAGATCTCTGGTCCTCATC | + |
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Preference number: 1 (lower is better) Translates to: KLETSILETCSVTCG*CQASAIPTRSLVLI Trigger: GATGAGGACCAGAGATCTGGTGGGAATGGCAGAGGCTTGGCAGCACCCGCAAGTCACAGAACAGGTCTCCAGTATGGAGGTCTCCAGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
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| 3UTR TCA 90 bp | TGGTGGACACAAAGGCTCCTCGCTGGTACCTGGTGCAGATTCAGGTaGCAAATGGGTTGTGCTTGGGGCCCTAAGTTTGGGAACCATAAC | + |
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Preference number: 1 (lower is better) Translates to: WWTQRLLAGTWCRFR*QMGCAWGPKFGNHN Trigger: GTTATGGTTCCCAAACTTAGGGCCCCAAGCACAACCCATTTGTCACCTGAATCTGCACCAGGTACCAGCGAGGAGCCTTTGTGTCCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
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| 3UTR TCA 90 bp | AGGGATACAGTCCATCGTGGCAGGGGATGTGTGGCAGCCAGAGTATaGGGTGAATGGTCAGGCAGAATTGTCCTTCCTGCTAGTCCTGAA | + |
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Preference number: 1 (lower is better) Translates to: RDTVHRGRGCVAARV*GEWSGRIVLPASPE Trigger: TTCAGGACTAGCAGGAAGGACAATTCTGCCTGACCATTCACCTCATACTCTGGCTGCCACACATCCCCTGCCACGATGGACTGTATCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
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| 3UTR CCA 90 bp | AGCTTCCTGCCAGGATGTCTGGACTCCTGGAGATATTCAGCTGCTTaGGATATGGAGCTGGTGGAGAAACGGAGAAGGCTCACTCACATC | + |
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Preference number: 1 (lower is better) Translates to: SFLPGCLDSWRYSAA*DMELVEKRRRLTHI Trigger: GATGTGAGTGAGCCTTCTCCGTTTCTCCACCAGCTCCATATCCCAAGCAGCTGAATATCTCCAGGAGTCCAGACATCCTGGCAGGAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
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| 3UTR CCA 90 bp | GGCTTGCAGTTTGAAGGGATACAGTCCATCGTGGCAGGGGATGTGTaGCAGCCAGAGTATGAGGTGAATGGTCAGGCAGAATTGTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: GLQFEGIQSIVAGDV*QPEYEVNGQAELSF Trigger: GAAGGACAATTCTGCCTGACCATTCACCTCATACTCTGGCTGCCACACATCCCCTGCCACGATGGACTGTATCCCTTCAAACTGCAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
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| 3UTR CCA 90 bp | CACAAAGGCTCCTCGCTGGTACCTGGTGCAGATTCAGGTGACAAATaGGTTGTGCTTGGGGCCCTAAGTTTGGGAACCATAACAGTCAAT | + |
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Preference number: 1 (lower is better) Translates to: HKGSSLVPGADSGDK*VVLGALSLGTITVN Trigger: ATTGACTGTTATGGTTCCCAAACTTAGGGCCCCAAGCACAACCCATTTGTCACCTGAATCTGCACCAGGTACCAGCGAGGAGCCTTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
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| 3UTR TCA 90 bp | AACTGTGGTGGTTTGAATATGCTTGGCCCATGGGAAGTGGCACTATaGGGAGATGTGGTCTTGTTGGAGGAAGTGTGTCACAGTTGGGGA | + |
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Preference number: 1 (lower is better) Translates to: NCGGLNMLGPWEVAL*GDVVLLEEVCHSWG Trigger: TCCCCAACTGTGACACACTTCCTCCAACAAGACCACATCTCCTCATAGTGCCACTTCCCATGGGCCAAGCATATTCAAACCACCACAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
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| 3UTR CCA 90 bp | GAACTCTCAGCTCTGCCTGCACCATGCCTGCTTGGATGTTGTTCTTaGTCCCTTAAGCGGCACTTTTTGCACTGGAGTTTTGACCAAGAA | + |
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Preference number: 1 (lower is better) Translates to: ELSALPAPCLLGCCS*SLKRHFLHWSFDQE Trigger: TTCTTGGTCAAAACTCCAGTGCAAAAAGTGCCGCTTAAGGGACCAAGAACAACATCCAAGCAGGCATGGTGCAGGCAGAGCTGAGAGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
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| 3UTR TCA 90 bp | TCCAGAAGGTACTGTGTGTTCCCAGGTGGCTGTACAATTTGTCCCTaGCCTGAAAATCCCAGGCAAGGCTACAAATCACATCTTCAACGC | + |
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Preference number: 1 (lower is better) Translates to: SRRYCVFPGGCTICP*PENPRQGYKSHLQR Trigger: GCGTTGAAGATGTGATTTGTAGCCTTGCCTGGGATTTTCAGGTCAGGGACAAATTGTACAGCCACCTGGGAACACACAGTACCTTCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
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| 3UTR TCA 90 bp | ACATGCTGCCATGTTTCCCTCCATGATGATAATGGACTGAACCTCTaGAACAAGGCAGCCTACACCTGTCTTATTCAAAGCAGCCATCCG | + |
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Preference number: 1 (lower is better) Translates to: TCCHVSLHDDNGLNL*NKAAYTCLIQSSHP Trigger: CGGATGGCTGCTTTGAATAAGACAGGTGTAGGCTGCCTTGTTTCAGAGGTTCAGTCCATTATCATCATGGAGGGAAACATGGCAGCATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
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| 3UTR TCA 90 bp | GCCTGTCCACATGCTGCCATGTTTCCCTCCATGATGATAATGGACTaGACCTCTGAAACAAGGCAGCCTACACCTGTCTTATTCAAAGCA | + |
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Preference number: 1 (lower is better) Translates to: ACPHAAMFPSMMIMD*TSETRQPTPVLFKA Trigger: TGCTTTGAATAAGACAGGTGTAGGCTGCCTTGTTTCAGAGGTTCAGTCCATTATCATCATGGAGGGAAACATGGCAGCATGTGGACAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
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| 3UTR GCA 90 bp | ACTGCACACAACACATCCTTCTCTTCATTTGCAGCTGAAGGGGGCTaGAGTATTAACTATGCCTCTCCTTCTGACCAAATACGCGACAAG | + |
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Preference number: 1 (lower is better) Translates to: TAHNTSFSSFAAEGG*SINYASPSDQIRDK Trigger: CTTGTCGCGTATTTGGTCAGAAGGAGAGGCATAGTTAATACTGCAGCCCCCTTCAGCTGCAAATGAAGAGAAGGATGTGTTGTGTGCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
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| 3UTR TCA 90 bp | AAGGAAAATCCACACCAGACTGCAGAATTCTTCACACATAAAATATaGGCCTCCACAAAGGCTCCTGCCTCCCTTCTCCATTGCCCAAAC | + |
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Preference number: 1 (lower is better) Translates to: KENPHQTAEFFTHKI*ASTKAPASLLHCPN Trigger: GTTTGGGCAATGGAGAAGGGAGGCAGGAGCCTTTGTGGAGGCTCATATTTTATGTGTGAAGAATTCTGCAGTCTGGTGTGGATTTTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
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| 3UTR GCA 90 bp | GTTATCATTTGCTCTTTTTGTATCTTCTTTTGGAAGTTCACCCTGTaGACAGGTCACAGGGAGGCCCTTCTCCAGCTTCCTTCTTGGCAT | + |
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Preference number: 1 (lower is better) Translates to: VIICSFCIFFWKFTL*TGHREALLQLPSWH Trigger: ATGCCAAGAAGGAAGCTGGAGAAGGGCCTCCCTGTGACCTGTGCACAGGGTGAACTTCCAAAAGAAGATACAAAAAGAGCAAATGATAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
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| 3UTR TCA 90 bp | ATACATGTCTCTGATACACAACACACTTGGGACATCTTTATTGGGTaGTATGCTGGCAAGGAATGGCTTGGTCCTGGGGGACATAATCAC | + |
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Preference number: 1 (lower is better) Translates to: IHVSDTQHTWDIFIG*YAGKEWLGPGGHNH Trigger: GTGATTATGTCCCCCAGGACCAAGCCATTCCTTGCCAGCATATCACCCAATAAAGATGTCCCAAGTGTGTTGTGTATCAGAGACATGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
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| 3UTR CCA 90 bp | GGCATAAATGATAGTTTATTCTGGAGCCAAGAACACAAATGTCCATaGCTTAGGAACACAGATTCAGGTTTCTTCATGCCCCCATGTTCC | + |
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Preference number: 1 (lower is better) Translates to: GINDSLFWSQEHKCP*LRNTDSGFFMPPCS Trigger: GGAACATGGGGGCATGAAGAAACCTGAATCTGTGTTCCTAAGCCATGGACATTTGTGTTCTTGGCTCCAGAATAAACTATCATTTATGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
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| 3UTR GCA 90 bp | ATGGGTTGTGCTTGGGGCCCTAAGTTTGGGAACCATAACAGTCAATaGAAAGACACAGCTCTCGTTTTAAAGGGCATAAATGATAGTTTA | + |
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Preference number: 1 (lower is better) Translates to: MGCAWGPKFGNHNSQ*KDTALVLKGINDSL Trigger: TAAACTATCATTTATGCCCTTTAAAACGAGAGCTGTGTCTTTGCATTGACTGTTATGGTTCCCAAACTTAGGGCCCCAAGCACAACCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGACCTCCCTCCCCTTGGAGACCTGGAGGGTCTCAGTCCCTTGCCCTCCCCCCCTACCCCAGCTTCCTaGCAGGATGTCTGGACTCCT | + |
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Preference number: 2 (lower is better) Translates to: LDLPPLGDLEGLSPLPSPPTPAS*QDVWTP Trigger: AGGAGTCCAGACATCCTGGCAGGAAGCTGGGGTAGG...GGGGGAGGGCAAGGGACTGAGACCCTCCAGGTCTCCAAGGGGAGGGAGGTCAAG 63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
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| 3UTR-3UTR CCA 90 bp | CTTATTCAAAGCAGCCATCCGTGTCATCCTCCCAGGGTGGTGGTGGCTGTGAGTCCAGCCAGGCCAGGCTaGGGAGGGGCAGCAACAGGC | + |
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Preference number: 2 (lower is better) Translates to: LIQSSHPCHPPRVVVAVSPARPG*GGAATG Trigger: GCCTGTTGCTGCCCCTCCCCAGCCTGGCCTGGCTGG...ACTCACAGCCACCACCACCCTGGGAGGATGACACGGATGGCTGCTTTGAATAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGATGTGGTCTTGTTGGAGGAAGTGTGTCACAGTTGGGGAGAGCCCCCTGCTACGCTGGCTGCGTTCTaGGGGGAAGCGCACACCCAG | + |
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Preference number: 2 (lower is better) Translates to: GDVVLLEEVCHSWGEPPATLAAF*GEAHTQ Trigger: CTGGGTGTGCGCTTCCCCGCAGAACGCAGCCAGCGT...AGCAGGGGGCTCTCCCCAACTGTGACACACTTCCTCCAACAAGACCACATCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGACCTCCCTCCCCTTGGAGACCTGGAGGGTCTCAGTCCCTTGCCCTCCCCCGGGATATGGAGCTGGTaGAGAAACGGAGAAGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: LDLPPLGDLEGLSPLPSPGIWSW*RNGEGS Trigger: TGAGCCTTCTCCGTTTCTCCACCAGCTCCATATCCC...GGGGGAGGGCAAGGGACTGAGACCCTCCAGGTCTCCAAGGGGAGGGAGGTCAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAAGTGTGTCACAGTTGGGGAGAGCCCCCTGCTGGCTAGCTGCAGAAGACAGAGAGTTGACGCTGGCTaGGTTCTGCGGGGAAGCGCA | + |
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Preference number: 2 (lower is better) Translates to: RKCVTVGESPLLASCRRQRVDAG*VLRGSA Trigger: TGCGCTTCCCCGCAGAACGCAGCCAGCGTCAACTCT...CTGTCTTCTGCAGCTAGCCAGCAGGGGGCTCTCCCCAACTGTGACACACTTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTGTTGGAGGAAGTGTGTCACAGTTGGGGAGAGCCCCCTGCTGGCTAGCTGCTTGATGCCAAACCCTTaGTGTCCCAGCCCCAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: SCWRKCVTVGESPLLASCLMPNP*CPSPSQ Trigger: CTGGCTGGGGCTGGGACAGCAAGGGTTTGGCATCAA...GCAGCTAGCCAGCAGGGGGCTCTCCCCAACTGTGACACACTTCCTCCAACAAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGACCTCCCTCCCCTTGGAGACCTGGAGGGTCTCAGTCCCTTGCCCTCCCCCCTGGAGATATTCAGCTaGTTGGGATATGGAGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: LDLPPLGDLEGLSPLPSPLEIFS*LGYGAG Trigger: ACCAGCTCCATATCCCAAGCAGCTGAATATCTCCAG...GGGGGAGGGCAAGGGACTGAGACCCTCCAGGTCTCCAAGGGGAGGGAGGTCAAG 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGAAGGGGGCTGCAGTATTAACTATGCCTCTCCTTCTGACCAAATACGCGACACGCTGGCTGCGTTCTaGGGGGAAGCGCACACCCAG | + |
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Preference number: 2 (lower is better) Translates to: AEGGCSINYASPSDQIRDTLAAF*GEAHTQ Trigger: CTGGGTGTGCGCTTCCCCGCAGAACGCAGCCAGCGT...GTCGCGTATTTGGTCAGAAGGAGAGGCATAGTTAATACTGCAGCCCCCTTCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
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| 3UTR-3UTR GCA 90 bp | ATGAGGAGATGTGGTCTTGTTGGAGGAAGTGTGTCACAGTTGGGGAGAGCCCCCAGAGTTGACGCTGGCTaGGTTCTGCGGGGAAGCGCA | + |
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Preference number: 2 (lower is better) Translates to: MRRCGLVGGSVSQLGRAPRVDAG*VLRGSA Trigger: TGCGCTTCCCCGCAGAACGCAGCCAGCGTCAACTCT...GGGGGCTCTCCCCAACTGTGACACACTTCCTCCAACAAGACCACATCTCCTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
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| 3UTR-3UTR GCA 90 bp | CCCCTTCCTGTCACGTGGTGTGATGGTTTGTATATGTTTGGCCCAGGGTGTGGCCTGCCTGTCCTCAGATaGAGAGCTCCTGCTCCAGCG | + |
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Preference number: 2 (lower is better) Translates to: PLPVTWCDGLYMFGPGCGLPVLR*RAPAPA Trigger: CGCTGGAGCAGGAGCTCTGCATCTGAGGACAGGCAG...GCCACACCCTGGGCCAAACATATACAAACCATCACACCACGTGACAGGAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
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| 3UTR-3UTR GCA 90 bp | TCCCAGGCAAGGCTACAAATCACATCTTCAACGCATGGCATTGTCAGCTCTCCCGTGACTTGCGGGTGCTaGCAAGCCTCTGCCATTCCC | + |
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Preference number: 2 (lower is better) Translates to: SQARLQITSSTHGIVSSPVTCGC*QASAIP Trigger: GGGAATGGCAGAGGCTTGGCAGCACCCGCAAGTCAC...GGGAGAGCTGACAATGCCATGCGTTGAAGATGTGATTTGTAGCCTTGCCTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCTTCCTGCCAGGATGTCTGGACTCCTGGAGATATTCAGCTGCTTGGGATATTTGATGCCAAACCCTTaGTGTCCCAGCCCCAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: QLPARMSGLLEIFSCLGYLMPNP*CPSPSQ Trigger: CTGGCTGGGGCTGGGACAGCAAGGGTTTGGCATCAA...ATATCCCAAGCAGCTGAATATCTCCAGGAGTCCAGACATCCTGGCAGGAAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTTTCCAGAAGGTACTGTGTGTTCCCAGGTGGCTGTACAATTTGTCCCTGACTTGGGGAGAGCCCCCTaGTGGCTAGCTGCAGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: SFPEGTVCSQVAVQFVPDLGRAP*WLAAED Trigger: GTCTTCTGCAGCTAGCCAGCAGGGGGCTCTCCCCAA...GTCAGGGACAAATTGTACAGCCACCTGGGAACACACAGTACCTTCTGGAAAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCAGCCAGAGTATGAGGTGAATGGTCAGGCAGAATTGTCCTTCCTGCTAGTCCTCCACAAAGGCTCCTaGCTCCCTTCTCCATTGCCC | + |
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Preference number: 2 (lower is better) Translates to: WQPEYEVNGQAELSFLLVLHKGS*LPSPLP Trigger: GGGCAATGGAGAAGGGAGGCAGGAGCCTTTGTGGAG...GACTAGCAGGAAGGACAATTCTGCCTGACCATTCACCTCATACTCTGGCTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGAAGGGGGCTGCAGTATTAACTATGCCTCTCCTTCTGACCAAATACGCGACGGTCATGCTGGGTGGTaGACACAAAGGCTCCTCGCT | + |
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Preference number: 2 (lower is better) Translates to: AEGGCSINYASPSDQIRDGHAGW*TQRLLA Trigger: AGCGAGGAGCCTTTGTGTCCACCACCCAGCATGACC...GTCGCGTATTTGGTCAGAAGGAGAGGCATAGTTAATACTGCAGCCCCCTTCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
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| 3UTR CAA 90 bp | CAGCTTCCTGCCAGGATGTCTGGACTCCTGGAGATATTCAGCTGCTaGGGATATGGAGCTGGTGGAGAAACGGAGAAGGCTCACTCACAT | + |
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Preference number: 2 (lower is better) Translates to: QLPARMSGLLEIFSC*GYGAGGETEKAHSH Trigger: ATGTGAGTGAGCCTTCTCCGTTTCTCCACCAGCTCCATATCCCAAGCAGCTGAATATCTCCAGGAGTCCAGACATCCTGGCAGGAAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
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| 3UTR-3UTR GCA 90 bp | ATGAGGAGATGTGGTCTTGTTGGAGGAAGTGTGTCACAGTTGGGGAGAGCCCCCAAGACAGTCTCCTTCTaGCTGTCCTCAGATGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: MRRCGLVGGSVSQLGRAPKTVSF*LSSDAE Trigger: CTCTGCATCTGAGGACAGGCAGAAGGAGACTGTCTT...GGGGGCTCTCCCCAACTGTGACACACTTCCTCCAACAAGACCACATCTCCTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGCACACAACACATCCTTCTCTTCATTTGCAGCTGAAGGGGGCTGCAGTATTGGGAGAGCCCCCTGCTaGCTAGCTGCAGAAGACAGT | + |
|
Preference number: 2 (lower is better) Translates to: TAHNTSFSSFAAEGGCSIGRAPC*LAAEDS Trigger: ACTGTCTTCTGCAGCTAGCCAGCAGGGGGCTCTCCC...AATACTGCAGCCCCCTTCAGCTGCAAATGAAGAGAAGGATGTGTTGTGTGCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGCAGCCAGAGTATGAGGTGAATGGTCAGGCAGAATTGTCCTTCCTGCTAGTCAGAGGTCATGCTGGGTaGTGGACACAAAGGCTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: WQPEYEVNGQAELSFLLVRGHAG*WTQRLL Trigger: GAGGAGCCTTTGTGTCCACCACCCAGCATGACCTCT...GACTAGCAGGAAGGACAATTCTGCCTGACCATTCACCTCATACTCTGGCTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR CAA 90 bp | GGGGATGTGTGGCAGCCAGAGTATGAGGTGAATGGTCAGGCAGAATaGTCCTTCCTGCTAGTCCTGAAAGGAAAATCCACACCAGACTGC | + |
|
Preference number: 2 (lower is better) Translates to: GDVWQPEYEVNGQAE*SFLLVLKGKSTPDC Trigger: GCAGTCTGGTGTGGATTTTCCTTTCAGGACTAGCAGGAAGGACAATTCTGCCTGACCATTCACCTCATACTCTGGCTGCCACACATCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGTTCACCCTGTGCACAGGTCACAGGGAGGCCCTTCTCCAGCTTCCTTCTTGGCACTATGAGGAGATGTaGTCTTGTTGGAGGAAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: KFTLCTGHREALLQLPSWHYEEM*SCWRKC Trigger: ACACTTCCTCCAACAAGACCACATCTCCTCATAGTG...CCAAGAAGGAAGCTGGAGAAGGGCCTCCCTGTGACCTGTGCACAGGGTGAACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR CAA 90 bp | CTGACCAAATACGCGACAAGACCTGGCTTCAGTGTTCATTTTGGCTaGCAGTTTGAAGGGATACAGTCCATCGTGGCAGGGGATGTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: LTKYATRPGFSVHFG*QFEGIQSIVAGDVW Trigger: CCACACATCCCCTGCCACGATGGACTGTATCCCTTCAAACTGCAAGCCAAAATGAACACTGAAGCCAGGTCTTGTCGCGTATTTGGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR CAA 90 bp | CACAGGGAGGCCCTTCTCCAGCTTCCTTCTTGGCATTTCCTTCCCTaGATCCTGGAATTCATTTTAGTGGGTGATGTGAGGAAGGGATTC | + |
|
Preference number: 2 (lower is better) Translates to: HREALLQLPSWHFLP*ILEFILVGDVRKGF Trigger: GAATCCCTTCCTCACATCACCCACTAAAATGAATTCCAGGATCAAGGGAAGGAAATGCCAAGAAGGAAGCTGGAGAAGGGCCTCCCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCCTTCCTGTCACGTGGTGTGATGGTTTGTATATGTTTGGCCCAGGGTGTGGCTTCACACATAAAATATaGGCCTCCACAAAGGCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: PLPVTWCDGLYMFGPGCGFTHKI*ASTKAP Trigger: AGGAGCCTTTGTGGAGGCTCATATTTTATGTGTGAA...GCCACACCCTGGGCCAAACATATACAAACCATCACACCACGTGACAGGAAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGAGACTCTCATTTTCCCCCTTCCTGTCACGTGGTGTGATGGTTTGTATATGTTTGATGCCAAACCCTTaGTGTCCCAGCCCCAGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: KRLSFSPFLSRGVMVCICLMPNP*CPSPSQ Trigger: CTGGCTGGGGCTGGGACAGCAAGGGTTTGGCATCAA...ACATATACAAACCATCACACCACGTGACAGGAAGGGGGAAAATGAGAGTCTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCTTTCCAGAAGGTACTGTGTGTTCCCAGGTGGCTGTACAATTTGTCCCTGACGGGACAGCTCATGTCTaGAGTTTGTTTCCCTGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: SFPEGTVCSQVAVQFVPDGTAHV*SLFPWQ Trigger: TTGCCAGGGAAACAAACTGCAGACATGAGCTGTCCC...GTCAGGGACAAATTGTACAGCCACCTGGGAACACACAGTACCTTCTGGAAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTGCACACAACACATCCTTCTCTTCATTTGCAGCTGAAGGGGGCTGCAGTATTTTGGCCCATGGGAAGTaGCACTATGAGGAGATGTGG | + |
|
Preference number: 2 (lower is better) Translates to: TAHNTSFSSFAAEGGCSILAHGK*HYEEMW Trigger: CCACATCTCCTCATAGTGCCACTTCCCATGGGCCAA...AATACTGCAGCCCCCTTCAGCTGCAAATGAAGAGAAGGATGTGTTGTGTGCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAAAATATGAGCCTCCACAAAGGCTCCTGCCTCCCTTCTCCATTGCCCAAACCGATTCAGGTGACAAATaGGTTGTGCTTGGGGCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: IKYEPPQRLLPPFSIAQTDSGDK*VVLGAL Trigger: TAGGGCCCCAAGCACAACCCATTTGTCACCTGAATC...GGTTTGGGCAATGGAGAAGGGAGGCAGGAGCCTTTGTGGAGGCTCATATTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR CAA 90 bp | ATCTCTGGTCCTCATCTTCCAGGGGCCGCCAGTTATTTATCAATGTaGCCTTCAATCAGTTACTCTGTCGCCAGTGTCTTTTCTCAGACT | + |
|
Preference number: 2 (lower is better) Translates to: ISGPHLPGAASYLSM*PSISYSVASVFSQT Trigger: AGTCTGAGAAAAGACACTGGCGACAGAGTAACTGATTGAAGGCAACATTGATAAATAACTGGCGGCCCCTGGAAGATGAGGACCAGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR-3UTR TCA 90 bp | CACATAAAATATGAGCCTCCACAAAGGCTCCTGCCTCCCTTCTCCATTGCCCAAATGATGATAATGGACTaGACCTCTGAAACAAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: HIKYEPPQRLLPPFSIAQMMIMD*TSETRQ Trigger: CTGCCTTGTTTCAGAGGTTCAGTCCATTATCATCAT...TTGGGCAATGGAGAAGGGAGGCAGGAGCCTTTGTGGAGGCTCATATTTTATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTGCACACAACACATCCTTCTCTTCATTTGCAGCTGAAGGGGGCTGCAGTATTTTTTGGCTTGCAGTTTaGAGGGATACAGTCCATCGT | + |
|
Preference number: 2 (lower is better) Translates to: TAHNTSFSSFAAEGGCSIFWLAV*RDTVHR Trigger: ACGATGGACTGTATCCCTTCAAACTGCAAGCCAAAA...AATACTGCAGCCCCCTTCAGCTGCAAATGAAGAGAAGGATGTGTTGTGTGCAGT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR-3UTR TCA 90 bp | AAATACATGTCTCTGATACACAACACACTTGGGACATCTTTATTGGGTGATATGTGGAGACCTGTTCTGTaGCTTGCGGGTGCTGCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: KYMSLIHNTLGTSLLGDMWRPVL*LAGAAK Trigger: CTTGGCAGCACCCGCAAGTCACAGAACAGGTCTCCA...CATATCACCCAATAAAGATGTCCCAAGTGTGTTGTGTATCAGAGACATGTATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR CAA 90 bp | ATCAAATACATGTCTCTGATACACAACACACTTGGGACATCTTTATaGGGTGATATGCTGGCAAGGAATGGCTTGGTCCTGGGGGACATA | + |
|
Preference number: 2 (lower is better) Translates to: IKYMSLIHNTLGTSL*GDMLARNGLVLGDI Trigger: TATGTCCCCCAGGACCAAGCCATTCCTTGCCAGCATATCACCCAATAAAGATGTCCCAAGTGTGTTGTGTATCAGAGACATGTATTTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR-3UTR TCA 90 bp | ACATCCTTCTCTTCATTTGCAGCTGAAGGGGGCTGCAGTATTAACTATGCCTCTATGATGATAATGGACTaGACCTCTGAAACAAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: TSFSSFAAEGGCSINYASMMIMD*TSETRQ Trigger: CTGCCTTGTTTCAGAGGTTCAGTCCATTATCATCAT...AGAGGCATAGTTAATACTGCAGCCCCCTTCAGCTGCAAATGAAGAGAAGGATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAAGGAAAATCCACACCAGACTGCAGAATTCTTCACACATAAAATATGAGCCTCCATGCCTGTCCACATaGTGCCATGTTTCCCTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: ERKIHTRLQNSSHIKYEPPCLST*CHVSLH Trigger: ATGGAGGGAAACATGGCAGCATGTGGACAGGCATGG...AGGCTCATATTTTATGTGTGAAGAATTCTGCAGTCTGGTGTGGATTTTCCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR-3UTR CCA 90 bp | AAATACATGTCTCTGATACACAACACACTTGGGACATCTTTATTGGGTGATATGCTGTGTGTTCCCAGGTaGCTGTACAATTTGTCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: KYMSLIHNTLGTSLLGDMLCVPR*LYNLSL Trigger: CAGGGACAAATTGTACAGCCACCTGGGAACACACAG...CATATCACCCAATAAAGATGTCCCAAGTGTGTTGTGTATCAGAGACATGTATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR CCA 72 bp | GTTAATGCCCCTCAGGCCAGGCTGTTGGGCTGTCCCTaGCTTGACCTCCCTCCCCTTGGAGACCTGGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: VNAPQARLLGCP*LDLPPLGDLEG Trigger: ACCCTCCAGGTCTCCAAGGGGAGGGAGGTCAAGCCAGGGACAGCCCAACAGCCTGGCCTGAGGGGCATTAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
||
| 3UTR TCA 72 bp | CACCCAGGATCTAGGGAGGTTGAGAGCCTCAGACCTTaGTGCCAAACCCTTGCTGTCCCAGCCCCAGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: HPGSREVESLRP*CQTLAVPAPAR Trigger: CCTGGCTGGGGCTGGGACAGCAAGGGTTTGGCATCAAGGTCTGAGGCTCTCAACCTCCCTAGATCCTGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTTGTTGGAGGAAGTGTGTCACAGTTGGGGAGAGCCCCCTGCTGGCTAGCTGCCTTGATGCCAAACCCTaGCTGTCCCAGCCCCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SCWRKCVTVGESPLLASCLDAKP*LSQPQP Trigger: TGGCTGGGGCTGGGACAGCAAGGGTTTGGCATCAAG...GCAGCTAGCCAGCAGGGGGCTCTCCCCAACTGTGACACACTTCCTCCAACAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTGACCTCCCTCCCCTTGGAGACCTGGAGGGTCTCAGTCCCTTGCCCTCCCCCTCACATCTAGGGAGGTaGAGAGCCTCAGACCTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: LDLPPLGDLEGLSPLPSPSHLGR*RASDLD Trigger: ATCAAGGTCTGAGGCTCTCAACCTCCCTAGATGTGA...GGGGGAGGGCAAGGGACTGAGACCCTCCAGGTCTCCAAGGGGAGGGAGGTCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
||
| 3UTR TCA 72 bp | CCTCCCAGGGTGGTGGTGGCTGTGAGTGTGAACACGTaGCTGAGCAGAAGAGTTGACGCTGGCTGCGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PPRVVVAVSVNT*LSRRVDAGCVL Trigger: CAGAACGCAGCCAGCGTCAACTCTTCTGCTCAGTCACGTGTTCACACTCACAGCCACCACCACCCTGGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR GCA 72 bp | CAGTCTCCTTCTGCCTGTCCTCAGATGCAGAGCTCCTaGTCCAGCGCCATGCCTGTCCACATGCTGCCATGT | + |
|
Preference number: 3 (lower is better) Translates to: QSPSACPQMQSS*SSAMPVHMLPC Trigger: ACATGGCAGCATGTGGACAGGCATGGCGCTGGAGCAGGAGCTCTGCATCTGAGGACAGGCAGAAGGAGACTG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR CCA 72 bp | GGAGGAAGTGTGTCACAGTTGGGGAGAGCCCCCTGCTaGCTAGCTGCAGAAGACAGTCTCCTTCTGCCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: GGSVSQLGRAPC*LAAEDSLLLPV Trigger: GACAGGCAGAAGGAGACTGTCTTCTGCAGCTAGCCAGCAGGGGGCTCTCCCCAACTGTGACACACTTCCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
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| 3UTR-3UTR CAA 90 bp | CCAAGCCTCTGCCATTCCCACCAGATCTCTGGTCCTCATCTTCCAGGGGCCGCCACGTGGTGTGATGGTTaGTATATGTTTGGCCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: PSLCHSHQISGPHLPGAATWCDG*YMFGPG Trigger: CCCTGGGCCAAACATATACAAACCATCACACCACGT...GGCGGCCCCTGGAAGATGAGGACCAGAGATCTGGTGGGAATGGCAGAGGCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR TCA 72 bp | TCACTCACATCTAGGGAGGTTGAGAGCCTCAGACCTTaGTGCCAAACCCTTGCTGTCCCAGCCCCAGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SLTSREVESLRP*CQTLAVPAPAR Trigger: CCTGGCTGGGGCTGGGACAGCAAGGGTTTGGCATCAAGGTCTGAGGCTCTCAACCTCCCTAGATGTGAGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
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| 3UTR GCA 72 bp | CCTGTCCTCAGATGCAGAGCTCCTGCTCCAGCGCCATaGCTGTCCACATGCTGCCATGTTTCCCTCCATGAT | + |
|
Preference number: 3 (lower is better) Translates to: PVLRCRAPAPAP*LSTCCHVSLHD Trigger: ATCATGGAGGGAAACATGGCAGCATGTGGACAGGCATGGCGCTGGAGCAGGAGCTCTGCATCTGAGGACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR GCA 72 bp | TGTGTCACAGTTGGGGAGAGCCCCCTGCTGGCTAGCTaGAGAAGACAGTCTCCTTCTGCCTGTCCTCAGATG | + |
|
Preference number: 3 (lower is better) Translates to: CVTVGESPLLAS*RRQSPSACPQM Trigger: CATCTGAGGACAGGCAGAAGGAGACTGTCTTCTGCAGCTAGCCAGCAGGGGGCTCTCCCCAACTGTGACACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR GCA 72 bp | GTTGGAGGAAGTGTGTCACAGTTGGGGAGAGCCCCCTaGTGGCTAGCTGCAGAAGACAGTCTCCTTCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: VGGSVSQLGRAP*WLAAEDSLLLP Trigger: AGGCAGAAGGAGACTGTCTTCTGCAGCTAGCCAGCAGGGGGCTCTCCCCAACTGTGACACACTTCCTCCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR GCA 72 bp | CTGGAGACCTCCATACTGGAGACCTGTTCTGTGACTTaGGGGTGCTGCCAAGCCTCTGCCATTCCCACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LETSILETCSVT*GCCQASAIPTR Trigger: TCTGGTGGGAATGGCAGAGGCTTGGCAGCACCCGCAAGTCACAGAACAGGTCTCCAGTATGGAGGTCTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR TCA 72 bp | TGCCTCCCTTCTCCATTGCCCAAACCAGCGTCCATCTaGAGAGGTCATGCTGGGTGGTGGACACAAAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: CLPSPLPKPASI*RGHAGWWTQRL Trigger: GAGCCTTTGTGTCCACCACCCAGCATGACCTCTTCAGATGGACGCTGGTTTGGGCAATGGAGAAGGGAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR GCA 72 bp | GACCTGTTCTGTGACTTGCGGGTGCTGCCAAGCCTCTaGCATTCCCACCAGATCTCTGGTCCTCATCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: DLFCDLRVLPSL*HSHQISGPHLP Trigger: TGGAAGATGAGGACCAGAGATCTGGTGGGAATGGCAGAGGCTTGGCAGCACCCGCAAGTCACAGAACAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR GCA 72 bp | TCCATACTGGAGACCTGTTCTGTGACTTGCGGGTGCTaGCAAGCCTCTGCCATTCCCACCAGATCTCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: SILETCSVTCGC*QASAIPTRSLV Trigger: GACCAGAGATCTGGTGGGAATGGCAGAGGCTTGGCAGCACCCGCAAGTCACAGAACAGGTCTCCAGTATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR GCA 72 bp | ACCTCCATACTGGAGACCTGTTCTGTGACTTGCGGGTaGTGCCAAGCCTCTGCCATTCCCACCAGATCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TSILETCSVTCG*CQASAIPTRSL Trigger: CAGAGATCTGGTGGGAATGGCAGAGGCTTGGCAGCACCCGCAAGTCACAGAACAGGTCTCCAGTATGGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR CCA 72 bp | CCCTACCCCAGCTTCCTGCCAGGATGTCTGGACTCCTaGAGATATTCAGCTGCTTGGGATATGGAGCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: PYPSFLPGCLDS*RYSAAWDMELV Trigger: CACCAGCTCCATATCCCAAGCAGCTGAATATCTCCAGGAGTCCAGACATCCTGGCAGGAAGCTGGGGTAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
||
| 3UTR CCA 72 bp | ATTGCCCAAACCAGCGTCCATCTGAAGAGGTCATGCTaGGTGGTGGACACAAAGGCTCCTCGCTGGTACCTG | + |
|
Preference number: 3 (lower is better) Translates to: IAQTSVHLKRSC*VVDTKAPRWYL Trigger: CAGGTACCAGCGAGGAGCCTTTGTGTCCACCACCCAGCATGACCTCTTCAGATGGACGCTGGTTTGGGCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR TCA 72 bp | CAAAGGCTCCTCGCTGGTACCTGGTGCAGATTCAGGTaGCAAATGGGTTGTGCTTGGGGCCCTAAGTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: QRLLAGTWCRFR*QMGCAWGPKFG Trigger: CCCAAACTTAGGGCCCCAAGCACAACCCATTTGTCACCTGAATCTGCACCAGGTACCAGCGAGGAGCCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR TCA 72 bp | GTCCATCGTGGCAGGGGATGTGTGGCAGCCAGAGTATaGGGTGAATGGTCAGGCAGAATTGTCCTTCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: VHRGRGCVAARV*GEWSGRIVLPA Trigger: AGCAGGAAGGACAATTCTGCCTGACCATTCACCTCATACTCTGGCTGCCACACATCCCCTGCCACGATGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR GCA 72 bp | TGCAGAGCTCCTGCTCCAGCGCCATGCCTGTCCACATaGTGCCATGTTTCCCTCCATGATGATAATGGACTG | + |
|
Preference number: 3 (lower is better) Translates to: CRAPAPAPCLST*CHVSLHDDNGL Trigger: CAGTCCATTATCATCATGGAGGGAAACATGGCAGCATGTGGACAGGCATGGCGCTGGAGCAGGAGCTCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR CCA 72 bp | CATGGGAAGTGGCACTATGAGGAGATGTGGTCTTGTTaGAGGAAGTGTGTCACAGTTGGGGAGAGCCCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: HGKWHYEEMWSC*RKCVTVGESPL Trigger: CAGGGGGCTCTCCCCAACTGTGACACACTTCCTCCAACAAGACCACATCTCCTCATAGTGCCACTTCCCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTATTCAAAGCAGCCATCCGTGTCATCCTCCCAGGGTGGTGGTGGCTGTGAGTCAGGATCTAGGGAGGTaGAGAGCCTCAGACCTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: LIQSSHPCHPPRVVVAVSQDLGR*RASDLD Trigger: ATCAAGGTCTGAGGCTCTCAACCTCCCTAGATCCTG...ACTCACAGCCACCACCACCCTGGGAGGATGACACGGATGGCTGCTTTGAATAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCCTTCCTGTCACGTGGTGTGATGGTTTGTATATGTTTGGCCCAGGGTGTGGCCATCCTTCTCTTCATTaGCAGCTGAAGGGGGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PLPVTWCDGLYMFGPGCGHPSLH*QLKGAA Trigger: TGCAGCCCCCTTCAGCTGCAAATGAAGAGAAGGATG...GCCACACCCTGGGCCAAACATATACAAACCATCACACCACGTGACAGGAAGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR GCA 72 bp | CCTGCCAGGATGTCTGGACTCCTGGAGATATTCAGCTaGTTGGGATATGGAGCTGGTGGAGAAACGGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PARMSGLLEIFS*LGYGAGGETEK Trigger: CTTCTCCGTTTCTCCACCAGCTCCATATCCCAAGCAGCTGAATATCTCCAGGAGTCCAGACATCCTGGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
||
| 3UTR GCA 72 bp | AGAGCTCCTGCTCCAGCGCCATGCCTGTCCACATGCTaGCATGTTTCCCTCCATGATGATAATGGACTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: RAPAPAPCLSTC*HVSLHDDNGLN Trigger: GTTCAGTCCATTATCATCATGGAGGGAAACATGGCAGCATGTGGACAGGCATGGCGCTGGAGCAGGAGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR CCA 72 bp | CCAGGATGTCTGGACTCCTGGAGATATTCAGCTGCTTaGGATATGGAGCTGGTGGAGAAACGGAGAAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: PGCLDSWRYSAA*DMELVEKRRRL Trigger: GAGCCTTCTCCGTTTCTCCACCAGCTCCATATCCCAAGCAGCTGAATATCTCCAGGAGTCCAGACATCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
||
| 3UTR CCA 72 bp | TGCTTGGCCCATGGGAAGTGGCACTATGAGGAGATGTaGTCTTGTTGGAGGAAGTGTGTCACAGTTGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: CLAHGKWHYEEM*SCWRKCVTVGE Trigger: CTCCCCAACTGTGACACACTTCCTCCAACAAGACCACATCTCCTCATAGTGCCACTTCCCATGGGCCAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR-3UTR CAA 90 bp | GCACACAACACATCCTTCTCTTCATTTGCAGCTGAAGGGGGCTGCAGTATTAACCTTGATGCCAAACCCTaGCTGTCCCAGCCCCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: AHNTSFSSFAAEGGCSINLDAKP*LSQPQP Trigger: TGGCTGGGGCTGGGACAGCAAGGGTTTGGCATCAAG...GTTAATACTGCAGCCCCCTTCAGCTGCAAATGAAGAGAAGGATGTGTTGTGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR CCA 72 bp | CCTGGAGATATTCAGCTGCTTGGGATATGGAGCTGGTaGAGAAACGGAGAAGGCTCACTCACATCTAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: PGDIQLLGIWSW*RNGEGSLTSRE Trigger: CTCCCTAGATGTGAGTGAGCCTTCTCCGTTTCTCCACCAGCTCCATATCCCAAGCAGCTGAATATCTCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
||
| 3UTR CCA 72 bp | TCCTCGCTGGTACCTGGTGCAGATTCAGGTGACAAATaGGTTGTGCTTGGGGCCCTAAGTTTGGGAACCATA | + |
|
Preference number: 3 (lower is better) Translates to: SSLVPGADSGDK*VVLGALSLGTI Trigger: TATGGTTCCCAAACTTAGGGCCCCAAGCACAACCCATTTGTCACCTGAATCTGCACCAGGTACCAGCGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR CCA 72 bp | TTTGAAGGGATACAGTCCATCGTGGCAGGGGATGTGTaGCAGCCAGAGTATGAGGTGAATGGTCAGGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: FEGIQSIVAGDV*QPEYEVNGQAE Trigger: TTCTGCCTGACCATTCACCTCATACTCTGGCTGCCACACATCCCCTGCCACGATGGACTGTATCCCTTCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR CCA 72 bp | TGGAAAGGCGTGGTAACCATGGTGACTACCACCAGATaGAACACGTGCCTCAGACATGTTCTGCAGACAAGC | + |
|
Preference number: 3 (lower is better) Translates to: WKGVVTMVTTTR*NTCLRHVLQTS Trigger: GCTTGTCTGCAGAACATGTCTGAGGCACGTGTTCCATCTGGTGGTAGTCACCATGGTTACCACGCCTTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCTTTCCAGAAGGTACTGTGTGTTCCCAGGTGGCTGTACAATTTGTCCCTGACCTTCAACGCATGGCATaGTCAGCTCTCCCAGGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SFPEGTVCSQVAVQFVPDLQRMA*SALPGL Trigger: CAAACCTGGGAGAGCTGACAATGCCATGCGTTGAAG...GTCAGGGACAAATTGTACAGCCACCTGGGAACACACAGTACCTTCTGGAAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR TCA 72 bp | AGAGACTCTCATTTTCCCCCTTCCTGTCACGTGGTGTaGTGGTTTGTATATGTTTGGCCCAGGGTGTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RDSHFPPSCHVV*WFVYVWPRVWL Trigger: GAGCCACACCCTGGGCCAAACATATACAAACCATCACACCACGTGACAGGAAGGGGGAAAATGAGAGTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR GCA 72 bp | GATGAAGATGTAGAACTCTCAGCTCTGCCTGCACCATaGCTGCTTGGATGTTGTTCTTGGTCCCTTAAGCGG | + |
|
Preference number: 3 (lower is better) Translates to: DEDVELSALPAP*LLGCCSWSLKR Trigger: CCGCTTAAGGGACCAAGAACAACATCCAAGCAGGCATGGTGCAGGCAGAGCTGAGAGTTCTACATCTTCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR CCA 72 bp | GCTCTGCCTGCACCATGCCTGCTTGGATGTTGTTCTTaGTCCCTTAAGCGGCACTTTTTGCACTGGAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: ALPAPCLLGCCS*SLKRHFLHWSF Trigger: AAAACTCCAGTGCAAAAAGTGCCGCTTAAGGGACCAAGAACAACATCCAAGCAGGCATGGTGCAGGCAGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGAAGGGGGCTGCAGTATTAACTATGCCTCTCCTTCTGACCAAATACGCGACAGTAACTGTGGTGGTTaGAATATGCTTGGCCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: AEGGCSINYASPSDQIRDSNCGG*NMLGPW Trigger: CCATGGGCCAAGCATATTCAAACCACCACAGTTACT...GTCGCGTATTTGGTCAGAAGGAGAGGCATAGTTAATACTGCAGCCCCCTTCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR TCA 72 bp | GGTTTGAATATGCTTGGCCCATGGGAAGTGGCACTATaGGGAGATGTGGTCTTGTTGGAGGAAGTGTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: GLNMLGPWEVAL*GDVVLLEEVCH Trigger: GTGACACACTTCCTCCAACAAGACCACATCTCCTCATAGTGCCACTTCCCATGGGCCAAGCATATTCAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR GCA 72 bp | TGCTCTTTTTGTATCTTCTTTTGGAAGTTCACCCTGTaGACAGGTCACAGGGAGGCCCTTCTCCAGCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: CSFCIFFWKFTL*TGHREALLQLP Trigger: AGGAAGCTGGAGAAGGGCCTCCCTGTGACCTGTGCACAGGGTGAACTTCCAAAAGAAGATACAAAAAGAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR GCA 72 bp | CCCAGGTTTGTTAATCCAGCAGGGACAGCTCATGTCTaGAGTTTGTTTCCCTGGCAACTAGTGAAACTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: PRFVNPAGTAHV*SLFPWQLVKLE Trigger: CTCCAGTTTCACTAGTTGCCAGGGAAACAAACTGCAGACATGAGCTGTCCCTGCTGGATTAACAAACCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR-3UTR CAA 90 bp | ACATCCTTCTCTTCATTTGCAGCTGAAGGGGGCTGCAGTATTAACTATGCCTCTCAGGATCTAGGGAGGTaGAGAGCCTCAGACCTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: TSFSSFAAEGGCSINYASQDLGR*RASDLD Trigger: ATCAAGGTCTGAGGCTCTCAACCTCCCTAGATCCTG...AGAGGCATAGTTAATACTGCAGCCCCCTTCAGCTGCAAATGAAGAGAAGGATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR-3UTR CAA 90 bp | GCACACAACACATCCTTCTCTTCATTTGCAGCTGAAGGGGGCTGCAGTATTAACAATGGTCAGGCAGAATaGTCCTTCCTGCTAGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: AHNTSFSSFAAEGGCSINNGQAE*SFLLVL Trigger: CAGGACTAGCAGGAAGGACAATTCTGCCTGACCATT...GTTAATACTGCAGCCCCCTTCAGCTGCAAATGAAGAGAAGGATGTGTTGTGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR CCA 72 bp | CTCAAAGAGACTCTCATTTTCCCCCTTCCTGTCACGTaGTGTGATGGTTTGTATATGTTTGGCCCAGGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LKETLIFPLPVT*CDGLYMFGPGC Trigger: ACACCCTGGGCCAAACATATACAAACCATCACACCACGTGACAGGAAGGGGGAAAATGAGAGTCTCTTTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR TCA 72 bp | CATGCTGCCATGTTTCCCTCCATGATGATAATGGACTaGACCTCTGAAACAAGGCAGCCTACACCTGTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: HAAMFPSMMIMD*TSETRQPTPVL Trigger: TAAGACAGGTGTAGGCTGCCTTGTTTCAGAGGTTCAGTCCATTATCATCATGGAGGGAAACATGGCAGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR TCA 72 bp | TACTGTGTGTTCCCAGGTGGCTGTACAATTTGTCCCTaGCCTGAAAATCCCAGGCAAGGCTACAAATCACAT | + |
|
Preference number: 3 (lower is better) Translates to: YCVFPGGCTICP*PENPRQGYKSH Trigger: ATGTGATTTGTAGCCTTGCCTGGGATTTTCAGGTCAGGGACAAATTGTACAGCCACCTGGGAACACACAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR CCA 72 bp | TGTTGTTCTTGGTCCCTTAAGCGGCACTTTTTGCACTaGAGTTTTGACCAAGAAACCTCGTCTGTTGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: CCSWSLKRHFLH*SFDQETSSVGK Trigger: CTTTCCAACAGACGAGGTTTCTTGGTCAAAACTCCAGTGCAAAAAGTGCCGCTTAAGGGACCAAGAACAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR TCA 72 bp | CATGTTTCCCTCCATGATGATAATGGACTGAACCTCTaGAACAAGGCAGCCTACACCTGTCTTATTCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: HVSLHDDNGLNL*NKAAYTCLIQS Trigger: GCTTTGAATAAGACAGGTGTAGGCTGCCTTGTTTCAGAGGTTCAGTCCATTATCATCATGGAGGGAAACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR TCA 72 bp | CAGTCTCTTGACGTTTTTATAGTAACTGTGGTGGTTTaGATATGCTTGGCCCATGGGAAGTGGCACTATGAG | + |
|
Preference number: 3 (lower is better) Translates to: QSLDVFIVTVVV*ICLAHGKWHYE Trigger: CTCATAGTGCCACTTCCCATGGGCCAAGCATATTCAAACCACCACAGTTACTATAAAAACGTCAAGAGACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR GCA 72 bp | GCTTGGGGCCCTAAGTTTGGGAACCATAACAGTCAATaGAAAGACACAGCTCTCGTTTTAAAGGGCATAAAT | + |
|
Preference number: 3 (lower is better) Translates to: AWGPKFGNHNSQ*KDTALVLKGIN Trigger: ATTTATGCCCTTTAAAACGAGAGCTGTGTCTTTGCATTGACTGTTATGGTTCCCAAACTTAGGGCCCCAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR GCA 72 bp | AACACATCCTTCTCTTCATTTGCAGCTGAAGGGGGCTaGAGTATTAACTATGCCTCTCCTTCTGACCAAATA | + |
|
Preference number: 3 (lower is better) Translates to: NTSFSSFAAEGG*SINYASPSDQI Trigger: TATTTGGTCAGAAGGAGAGGCATAGTTAATACTGCAGCCCCCTTCAGCTGCAAATGAAGAGAAGGATGTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR CCA 72 bp | GATAGTTTATTCTGGAGCCAAGAACACAAATGTCCATaGCTTAGGAACACAGATTCAGGTTTCTTCATGCCC | + |
|
Preference number: 3 (lower is better) Translates to: DSLFWSQEHKCP*LRNTDSGFFMP Trigger: GGGCATGAAGAAACCTGAATCTGTGTTCCTAAGCCATGGACATTTGTGTTCTTGGCTCCAGAATAAACTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR CCA 72 bp | GCTCTCGTTTTAAAGGGCATAAATGATAGTTTATTCTaGAGCCAAGAACACAAATGTCCATGGCTTAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: ALVLKGINDSLF*SQEHKCPWLRN Trigger: GTTCCTAAGCCATGGACATTTGTGTTCTTGGCTCCAGAATAAACTATCATTTATGCCCTTTAAAACGAGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| CDS-3UTR GCA 90 bp | GGGAGGGGCAGCAACAGGCTTAGGGGACAAGCTCCAAAGCCCAGCAGGAGGGAGAAGAGGCGCGGGGGCTaGAGGCGGGGGTCCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRGSNRLRGQAPKPSRREKRRGG*RRGSSG Trigger: CCCAGAGGACCCCCGCCTGCAGCCCCCGCGCCTCTT...CTCCCTCCTGCTGGGCTTTGGAGCTTGTCCCCTAAGCCTGTTGCTGCCCCTCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000127095.8 ENSMUST00000156032.2 |
||
| CDS-3UTR CCA 90 bp | GGGGCAGCAACAGGCTTAGGGGACAAGCTCCAAAGCCCAGCAGGAGGGAGGGAGTGGCACCACAGGCCATaGGCCGGCGAGGGGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GAATGLGDKLQSPAGGREWHHRP*AGEGQR Trigger: TCTCTGCCCCTCGCCGGCCCATGGCCTGTGGTGCCA...CTCCCTCCCTCCTGCTGGGCTTTGGAGCTTGTCCCCTAAGCCTGTTGCTGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGGGCAGCAACAGGCTTAGGGGACAAGCTCCAAAGCCCAGCAGGAGGGAGGTGGCACCACAGGCCATaGGCCGGCGAGGGGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GGAATGLGDKLQSPAGGRWHHRP*AGEGQR Trigger: TCTCTGCCCCTCGCCGGCCCATGGCCTGTGGTGCCA...CCTCCCTCCTGCTGGGCTTTGGAGCTTGTCCCCTAAGCCTGTTGCTGCCCCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGGCAGCAACAGGCTTAGGGGACAAGCTCCAAAGCCCAGCAGGAGGGAGGCCAGGGTGCAGTCCTaGCACCACAGGCCATGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRGSNRLRGQAPKPSRREARVQS*HHRPWA Trigger: GGCCCATGGCCTGTGGTGCCAGGACTGCACCCTGGC...CTCCCTCCTGCTGGGCTTTGGAGCTTGTCCCCTAAGCCTGTTGCTGCCCCTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
||
| CDS-3UTR CCA 90 bp | AGGGGCAGCAACAGGCTTAGGGGACAAGCTCCAAAGCCCAGCAGGAGGGAGGGAGCCAGGGTGCAGTCCTaGCACCACAGGCCATGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RGSNRLRGQAPKPSRREGARVQS*HHRPWA Trigger: GGCCCATGGCCTGTGGTGCCAGGACTGCACCCTGGC...TCCCTCCCTCCTGCTGGGCTTTGGAGCTTGTCCCCTAAGCCTGTTGCTGCCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAAGAGTTGACGCTGGCTGCGTTCTGCGGGGAAGCGCACACCCAGGATCTAGCCAGGGTGCAGTCCTaGCACCACAGGCCATGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AEELTLAAFCGEAHTQDLARVQS*HHRPWA Trigger: GGCCCATGGCCTGTGGTGCCAGGACTGCACCCTGGC...TAGATCCTGGGTGTGCGCTTCCCCGCAGAACGCAGCCAGCGTCAACTCTTCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| CDS-3UTR GCA 90 bp | TACCCCAGCTTCCTGCCAGGATGTCTGGACTCCTGGAGATATTCAGCTGCTTGGAAGAGGCGCGGGGGCTaGAGGCGGGGGTCCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: YPSFLPGCLDSWRYSAAWKRRGG*RRGSSG Trigger: CCCAGAGGACCCCCGCCTGCAGCCCCCGCGCCTCTT...CCAAGCAGCTGAATATCTCCAGGAGTCCAGACATCCTGGCAGGAAGCTGGGGTA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000127095.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGGCAGCAACAGGCTTAGGGGACAAGCTCCAAAGCCCAGCAGGAGGGAGCGCAATGGCTGGAATTaGCCAGGGTGCAGTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRGSNRLRGQAPKPSRRERNGWN*PGCSPG Trigger: GCCAGGACTGCACCCTGGCCAATTCCAGCCATTGCG...CTCCCTCCTGCTGGGCTTTGGAGCTTGTCCCCTAAGCCTGTTGCTGCCCCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCAGCAACAGGCTTAGGGGACAAGCTCCAAAGCCCAGCAGGAGGGAGGGAGCGCAATGGCTGGAATTaGCCAGGGTGCAGTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GAATGLGDKLQSPAGGRERNGWN*PGCSPG Trigger: GCCAGGACTGCACCCTGGCCAATTCCAGCCATTGCG...CTCCCTCCCTCCTGCTGGGCTTTGGAGCTTGTCCCCTAAGCCTGTTGCTGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
||
| CDS-3UTR CCA 90 bp | CTTGACCTCCCTCCCCTTGGAGACCTGGAGGGTCTCAGTCCCTTGCCCTCCCCCTCGGAGCGCAATGGCTaGAATTGGCCAGGGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LDLPPLGDLEGLSPLPSPSERNG*NWPGCS Trigger: ACTGCACCCTGGCCAATTCCAGCCATTGCGCTCCGA...GGGGGAGGGCAAGGGACTGAGACCCTCCAGGTCTCCAAGGGGAGGGAGGTCAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCAGCAACAGGCTTAGGGGACAAGCTCCAAAGCCCAGCAGGAGGGAGGGAGGACCGAGGCTCTTCATaGCTGCAGGCAGCATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GAATGLGDKLQSPAGGREDRGSS*LQAACS Trigger: GGAGCATGCTGCCTGCAGCCATGAAGAGCCTCGGTC...CTCCCTCCCTCCTGCTGGGCTTTGGAGCTTGTCCCCTAAGCCTGTTGCTGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127095.8 ENSMUST00000156032.2 |
||
| CDS-3UTR CCA 90 bp | GGAGATGTGGTCTTGTTGGAGGAAGTGTGTCACAGTTGGGGAGAGCCCCCTGCTTGGCACCACAGGCCATaGGCCGGCGAGGGGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GDVVLLEEVCHSWGEPPAWHHRP*AGEGQR Trigger: TCTCTGCCCCTCGCCGGCCCATGGCCTGTGGTGCCA...AGCAGGGGGCTCTCCCCAACTGTGACACACTTCCTCCAACAAGACCACATCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCAGCAACAGGCTTAGGGGACAAGCTCCAAAGCCCAGCAGGAGGGAGGGAGTCGGAGCGCAATGGCTaGAATTGGCCAGGGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GAATGLGDKLQSPAGGRESERNG*NWPGCS Trigger: ACTGCACCCTGGCCAATTCCAGCCATTGCGCTCCGA...CTCCCTCCCTCCTGCTGGGCTTTGGAGCTTGTCCCCTAAGCCTGTTGCTGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGGGCAGCAACAGGCTTAGGGGACAAGCTCCAAAGCCCAGCAGGAGGGAGGCACAAACGGTATCGGTaGGCTGGCACTGCTTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GGAATGLGDKLQSPAGGRHKRYR*AGTASE Trigger: CTCCGAAGCAGTGCCAGCCCACCGATACCGTTTGTG...CCTCCCTCCTGCTGGGCTTTGGAGCTTGTCCCCTAAGCCTGTTGCTGCCCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCAGCAACAGGCTTAGGGGACAAGCTCCAAAGCCCAGCAGGAGGGAGGGAGCACAAACGGTATCGGTaGGCTGGCACTGCTTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GAATGLGDKLQSPAGGREHKRYR*AGTASE Trigger: CTCCGAAGCAGTGCCAGCCCACCGATACCGTTTGTG...CTCCCTCCCTCCTGCTGGGCTTTGGAGCTTGTCCCCTAAGCCTGTTGCTGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAAGAGTTGACGCTGGCTGCGTTCTGCGGGGAAGCGCACACCCAGGATCTACGCAATGGCTGGAATTaGCCAGGGTGCAGTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AEELTLAAFCGEAHTQDLRNGWN*PGCSPG Trigger: GCCAGGACTGCACCCTGGCCAATTCCAGCCATTGCG...TAGATCCTGGGTGTGCGCTTCCCCGCAGAACGCAGCCAGCGTCAACTCTTCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| CDS-3UTR CCA 90 bp | GCTCACTCACATCTAGGGAGGTTGAGAGCCTCAGACCTTGATGCCAAACCCTTGTGGCACCACAGGCCATaGGCCGGCGAGGGGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AHSHLGRLRASDLDAKPLWHHRP*AGEGQR Trigger: TCTCTGCCCCTCGCCGGCCCATGGCCTGTGGTGCCA...CAAGGGTTTGGCATCAAGGTCTGAGGCTCTCAACCTCCCTAGATGTGAGTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
||
| CDS-3UTR CCA 90 bp | GCTCACTCACATCTAGGGAGGTTGAGAGCCTCAGACCTTGATGCCAAACCCTTGGCCAGGGTGCAGTCCTaGCACCACAGGCCATGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AHSHLGRLRASDLDAKPLARVQS*HHRPWA Trigger: GGCCCATGGCCTGTGGTGCCAGGACTGCACCCTGGC...CAAGGGTTTGGCATCAAGGTCTGAGGCTCTCAACCTCCCTAGATGTGAGTGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
||
| CDS-3UTR CCA 90 bp | AGACAGTCTCCTTCTGCCTGTCCTCAGATGCAGAGCTCCTGCTCCAGCGCCATGCGCAATGGCTGGAATTaGCCAGGGTGCAGTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RQSPSACPQMQSSCSSAMRNGWN*PGCSPG Trigger: GCCAGGACTGCACCCTGGCCAATTCCAGCCATTGCG...CATGGCGCTGGAGCAGGAGCTCTGCATCTGAGGACAGGCAGAAGGAGACTGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCATCCGTGTCATCCTCCCAGGGTGGTGGTGGCTGTGAGTGTGAACACGTGTCGGAGCGCAATGGCTaGAATTGGCCAGGGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QPSVSSSQGGGGCECEHVSERNG*NWPGCS Trigger: ACTGCACCCTGGCCAATTCCAGCCATTGCGCTCCGA...CACGTGTTCACACTCACAGCCACCACCACCCTGGGAGGATGACACGGATGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTTCCTGCCAGGATGTCTGGACTCCTGGAGATATTCAGCTGCTTGGGATATGCCAGGGTGCAGTCCTaGCACCACAGGCCATGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QLPARMSGLLEIFSCLGYARVQS*HHRPWA Trigger: GGCCCATGGCCTGTGGTGCCAGGACTGCACCCTGGC...ATATCCCAAGCAGCTGAATATCTCCAGGAGTCCAGACATCCTGGCAGGAAGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
||
| CDS-3UTR CCA 90 bp | TCCCAGGCAAGGCTACAAATCACATCTTCAACGCATGGCATTGTCAGCTCTCCCGCCAGGGTGCAGTCCTaGCACCACAGGCCATGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQARLQITSSTHGIVSSPARVQS*HHRPWA Trigger: GGCCCATGGCCTGTGGTGCCAGGACTGCACCCTGGC...GGGAGAGCTGACAATGCCATGCGTTGAAGATGTGATTTGTAGCCTTGCCTGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGGGCAGCAACAGGCTTAGGGGACAAGCTCCAAAGCCCAGCAGGAGGGAGGATCTTGTTCACAGAATaGTCCTTCCTGCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GGAATGLGDKLQSPAGGRILFTE*SFLLLL Trigger: CAGCAGCAGCAGGAAGGATCATTCTGTGAACAAGAT...CCTCCCTCCTGCTGGGCTTTGGAGCTTGTCCCCTAAGCCTGTTGCTGCCCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
||
| CDS-3UTR TCA 90 bp | GGGGCAGCAACAGGCTTAGGGGACAAGCTCCAAAGCCCAGCAGGAGGGAGGGAGCCCCATCAGATAGTCTaGGAAAAAGTGCCGCTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: GAATGLGDKLQSPAGGREPHQIV*EKVPLN Trigger: GTTAAGCGGCACTTTTTCTCAGACTATCTGATGGGG...CTCCCTCCCTCCTGCTGGGCTTTGGAGCTTGTCCCCTAAGCCTGTTGCTGCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTCACCCTGTGCACAGGTCACAGGGAGGCCCTTCTCCAGCTTCCTTCTTGGTCGGAGCGCAATGGCTaGAATTGGCCAGGGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KFTLCTGHREALLQLPSWSERNG*NWPGCS Trigger: ACTGCACCCTGGCCAATTCCAGCCATTGCGCTCCGA...CCAAGAAGGAAGCTGGAGAAGGGCCTCCCTGTGACCTGTGCACAGGGTGAACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR CAA 72 bp | ACTGGAGACCTCCATACTGGAGACCTGTTCTGTGACTaGCGGGTGCTGCCAAGCCTCTGCCATTCCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGDLHTGDLFCD*RVLPSLCHSHQ Trigger: CTGGTGGGAATGGCAGAGGCTTGGCAGCACCCGCAAGTCACAGAACAGGTCTCCAGTATGGAGGTCTCCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| CDS-3UTR TCA 90 bp | AGGGGCAGCAACAGGCTTAGGGGACAAGCTCCAAAGCCCAGCAGGAGGGAGGGAATCTTGTTCACAGAATaGTCCTTCCTGCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGSNRLRGQAPKPSRREGILFTE*SFLLLL Trigger: CAGCAGCAGCAGGAAGGATCATTCTGTGAACAAGAT...TCCCTCCCTCCTGCTGGGCTTTGGAGCTTGTCCCCTAAGCCTGTTGCTGCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
||
| CDS-3UTR TCA 90 bp | AGGGGCAGCAACAGGCTTAGGGGACAAGCTCCAAAGCCCAGCAGGAGGGAGGGACCCCATCAGATAGTCTaGGAAAAAGTGCCGCTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: RGSNRLRGQAPKPSRREGPHQIV*EKVPLN Trigger: GTTAAGCGGCACTTTTTCTCAGACTATCTGATGGGG...TCCCTCCCTCCTGCTGGGCTTTGGAGCTTGTCCCCTAAGCCTGTTGCTGCCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCACACAACACATCCTTCTCTTCATTTGCAGCTGAAGGGGGCTGCAGTATTTGGCACCACAGGCCATaGGCCGGCGAGGGGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TAHNTSFSSFAAEGGCSIWHHRP*AGEGQR Trigger: TCTCTGCCCCTCGCCGGCCCATGGCCTGTGGTGCCA...AATACTGCAGCCCCCTTCAGCTGCAAATGAAGAGAAGGATGTGTTGTGTGCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| CDS-3UTR CCA 90 bp | GGAGAAACGGAGAAGGCTCACTCACATCTAGGGAGGTTGAGAGCCTCAGACCTTCGCAATGGCTGGAATTaGCCAGGGTGCAGTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GETEKAHSHLGRLRASDLRNGWN*PGCSPG Trigger: GCCAGGACTGCACCCTGGCCAATTCCAGCCATTGCG...AAGGTCTGAGGCTCTCAACCTCCCTAGATGTGAGTGAGCCTTCTCCGTTTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
||
| CDS-3UTR CCA 90 bp | GCTCACTCACATCTAGGGAGGTTGAGAGCCTCAGACCTTGATGCCAAACCCTTGGACCGAGGCTCTTCATaGCTGCAGGCAGCATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AHSHLGRLRASDLDAKPLDRGSS*LQAACS Trigger: GGAGCATGCTGCCTGCAGCCATGAAGAGCCTCGGTC...CAAGGGTTTGGCATCAAGGTCTGAGGCTCTCAACCTCCCTAGATGTGAGTGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127095.8 |
||
| 3UTR CAA 72 bp | AGGAGATGTGGTCTTGTTGGAGGAAGTGTGTCACAGTaGGGGAGAGCCCCCTGCTGGCTAGCTGCAGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RRCGLVGGSVSQ*GRAPCWLAAED Trigger: GTCTTCTGCAGCTAGCCAGCAGGGGGCTCTCCCCAACTGTGACACACTTCCTCCAACAAGACCACATCTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| CDS-3UTR CCA 90 bp | GCTCACTCACATCTAGGGAGGTTGAGAGCCTCAGACCTTGATGCCAAACCCTTGTCGGAGCGCAATGGCTaGAATTGGCCAGGGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AHSHLGRLRASDLDAKPLSERNG*NWPGCS Trigger: ACTGCACCCTGGCCAATTCCAGCCATTGCGCTCCGA...CAAGGGTTTGGCATCAAGGTCTGAGGCTCTCAACCTCCCTAGATGTGAGTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
||
| CDS-3UTR CCA 90 bp | GGAGAAACGGAGAAGGCTCACTCACATCTAGGGAGGTTGAGAGCCTCAGACCTTTCGGAGCGCAATGGCTaGAATTGGCCAGGGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GETEKAHSHLGRLRASDLSERNG*NWPGCS Trigger: ACTGCACCCTGGCCAATTCCAGCCATTGCGCTCCGA...AAGGTCTGAGGCTCTCAACCTCCCTAGATGTGAGTGAGCCTTCTCCGTTTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
||
| CDS-3UTR CCA 90 bp | GGAGAAACGGAGAAGGCTCACTCACATCTAGGGAGGTTGAGAGCCTCAGACCTTCACAAACGGTATCGGTaGGCTGGCACTGCTTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GETEKAHSHLGRLRASDLHKRYR*AGTASE Trigger: CTCCGAAGCAGTGCCAGCCCACCGATACCGTTTGTG...AAGGTCTGAGGCTCTCAACCTCCCTAGATGTGAGTGAGCCTTCTCCGTTTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
||
| CDS-3UTR CCA 90 bp | GCTCACTCACATCTAGGGAGGTTGAGAGCCTCAGACCTTGATGCCAAACCCTTGCACAAACGGTATCGGTaGGCTGGCACTGCTTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AHSHLGRLRASDLDAKPLHKRYR*AGTASE Trigger: CTCCGAAGCAGTGCCAGCCCACCGATACCGTTTGTG...CAAGGGTTTGGCATCAAGGTCTGAGGCTCTCAACCTCCCTAGATGTGAGTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTTCCTGCCAGGATGTCTGGACTCCTGGAGATATTCAGCTGCTTGGGATATCACAAACGGTATCGGTaGGCTGGCACTGCTTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QLPARMSGLLEIFSCLGYHKRYR*AGTASE Trigger: CTCCGAAGCAGTGCCAGCCCACCGATACCGTTTGTG...ATATCCCAAGCAGCTGAATATCTCCAGGAGTCCAGACATCCTGGCAGGAAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
||
| CDS-3UTR CCA 90 bp | TGGCAGCCAGAGTATGAGGTGAATGGTCAGGCAGAATTGTCCTTCCTGCTAGTCCACAAACGGTATCGGTaGGCTGGCACTGCTTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WQPEYEVNGQAELSFLLVHKRYR*AGTASE Trigger: CTCCGAAGCAGTGCCAGCCCACCGATACCGTTTGTG...GACTAGCAGGAAGGACAATTCTGCCTGACCATTCACCTCATACTCTGGCTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR CAA 72 bp | GGAGAAACGGAGAAGGCTCACTCACATCTAGGGAGGTaGAGAGCCTCAGACCTTGATGCCAAACCCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GETEKAHSHLGR*RASDLDAKPLL Trigger: CAGCAAGGGTTTGGCATCAAGGTCTGAGGCTCTCAACCTCCCTAGATGTGAGTGAGCCTTCTCCGTTTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
||
| CDS-3UTR TCA 90 bp | CACTCACATCTAGGGAGGTTGAGAGCCTCAGACCTTGATGCCAAACCCTTGCTGATCTTGTTCACAGAATaGTCCTTCCTGCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HSHLGRLRASDLDAKPLLILFTE*SFLLLL Trigger: CAGCAGCAGCAGGAAGGATCATTCTGTGAACAAGAT...CAGCAAGGGTTTGGCATCAAGGTCTGAGGCTCTCAACCTCCCTAGATGTGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAAACGGAGAAGGCTCACTCACATCTAGGGAGGTTGAGAGCCTCAGACCTTCCCCATCAGATAGTCTaGGAAAAAGTGCCGCTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: GETEKAHSHLGRLRASDLPHQIV*EKVPLN Trigger: GTTAAGCGGCACTTTTTCTCAGACTATCTGATGGGG...AAGGTCTGAGGCTCTCAACCTCCCTAGATGTGAGTGAGCCTTCTCCGTTTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
||
| CDS-3UTR TCA 90 bp | CACTCACATCTAGGGAGGTTGAGAGCCTCAGACCTTGATGCCAAACCCTTGCTGCCCCATCAGATAGTCTaGGAAAAAGTGCCGCTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: HSHLGRLRASDLDAKPLLPHQIV*EKVPLN Trigger: GTTAAGCGGCACTTTTTCTCAGACTATCTGATGGGG...CAGCAAGGGTTTGGCATCAAGGTCTGAGGCTCTCAACCTCCCTAGATGTGAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
||
| CDS-3UTR TCA 90 bp | GCTCACTCACATCTAGGGAGGTTGAGAGCCTCAGACCTTGATGCCAAACCCTTGCCCCATCAGATAGTCTaGGAAAAAGTGCCGCTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: AHSHLGRLRASDLDAKPLPHQIV*EKVPLN Trigger: GTTAAGCGGCACTTTTTCTCAGACTATCTGATGGGG...CAAGGGTTTGGCATCAAGGTCTGAGGCTCTCAACCTCCCTAGATGTGAGTGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
||
| 3UTR CAA 72 bp | TACGCGACAAGACCTGGCTTCAGTGTTCATTTTGGCTaGCAGTTTGAAGGGATACAGTCCATCGTGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YATRPGFSVHFG*QFEGIQSIVAG Trigger: CCCTGCCACGATGGACTGTATCCCTTCAAACTGCAAGCCAAAATGAACACTGAAGCCAGGTCTTGTCGCGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCTGCCAGGATGTCTGGACTCCTGGAGATATTCAGCTGCTTGGGATATGGAATCTTGTTCACAGAATaGTCCTTCCTGCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPARMSGLLEIFSCLGYGILFTE*SFLLLL Trigger: CAGCAGCAGCAGGAAGGATCATTCTGTGAACAAGAT...TCCATATCCCAAGCAGCTGAATATCTCCAGGAGTCCAGACATCCTGGCAGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000127095.8 |
||
| 3UTR CAA 72 bp | CAAGACCTGGCTTCAGTGTTCATTTTGGCTTGCAGTTaGAAGGGATACAGTCCATCGTGGCAGGGGATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QDLASVFILACS*KGYSPSWQGMC Trigger: ACACATCCCCTGCCACGATGGACTGTATCCCTTCAAACTGCAAGCCAAAATGAACACTGAAGCCAGGTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR CAA 72 bp | CACAGGTCACAGGGAGGCCCTTCTCCAGCTTCCTTCTaGGCATTTCCTTCCCTTGATCCTGGAATTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: HRSQGGPSPASF*AFPSLDPGIHF Trigger: AAAATGAATTCCAGGATCAAGGGAAGGAAATGCCAAGAAGGAAGCTGGAGAAGGGCCTCCCTGTGACCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR CAA 72 bp | CATCTTCAACGCATGGCATTGTCAGCTCTCCCAGGTTaGTTAATCCAGCAGGGACAGCTCATGTCTGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HLQRMALSALPG*LIQQGQLMSAV Trigger: AACTGCAGACATGAGCTGTCCCTGCTGGATTAACAAACCTGGGAGAGCTGACAATGCCATGCGTTGAAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| CDS-3UTR TCA 90 bp | ATAAAATATGAGCCTCCACAAAGGCTCCTGCCTCCCTTCTCCATTGCCCAAACCATCTTGTTCACAGAATaGTCCTTCCTGCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IKYEPPQRLLPPFSIAQTILFTE*SFLLLL Trigger: CAGCAGCAGCAGGAAGGATCATTCTGTGAACAAGAT...GGTTTGGGCAATGGAGAAGGGAGGCAGGAGCCTTTGTGGAGGCTCATATTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR CAA 72 bp | TCAGGTGACAAATGGGTTGTGCTTGGGGCCCTAAGTTaGGGAACCATAACAGTCAATGCAAAGACACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SGDKWVVLGALS*GTITVNAKTQL Trigger: GAGCTGTGTCTTTGCATTGACTGTTATGGTTCCCAAACTTAGGGCCCCAAGCACAACCCATTTGTCACCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| 3UTR CAA 72 bp | TTTTGCACTGGAGTTTTGACCAAGAAACCTCGTCTGTaGGAAAGGCGTGGTAACCATGGTGACTACCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: FCTGVLTKKPRL*ERRGNHGDYHQ Trigger: CTGGTGGTAGTCACCATGGTTACCACGCCTTTCCAACAGACGAGGTTTCTTGGTCAAAACTCCAGTGCAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR CAA 72 bp | AGGCAAGGCTACAAATCACATCTTCAACGCATGGCATaGTCAGCTCTCCCAGGTTTGTTAATCCAGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RQGYKSHLQRMA*SALPGLLIQQG Trigger: TCCCTGCTGGATTAACAAACCTGGGAGAGCTGACAATGCCATGCGTTGAAGATGTGATTTGTAGCCTTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR CAA 72 bp | CCTCATCTTCCAGGGGCCGCCAGTTATTTATCAATGTaGCCTTCAATCAGTTACTCTGTCGCCAGTGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PHLPGAASYLSM*PSISYSVASVF Trigger: AAAGACACTGGCGACAGAGTAACTGATTGAAGGCAACATTGATAAATAACTGGCGGCCCCTGGAAGATGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR CAA 72 bp | ACATCTTTATTGGGTGATATGCTGGCAAGGAATGGCTaGGTCCTGGGGGACATAATCACTCAGCTTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TSLLGDMLARNG*VLGDIITQLSR Trigger: TCTGGAAAGCTGAGTGATTATGTCCCCCAGGACCAAGCCATTCCTTGCCAGCATATCACCCAATAAAGATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| 3UTR CAA 72 bp | CTTGGATGTTGTTCTTGGTCCCTTAAGCGGCACTTTTaGCACTGGAGTTTTGACCAAGAAACCTCGTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LGCCSWSLKRHF*HWSFDQETSSV Trigger: AACAGACGAGGTTTCTTGGTCAAAACTCCAGTGCAAAAAGTGCCGCTTAAGGGACCAAGAACAACATCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163116.8 |
||
| CDS-3UTR TCA 90 bp | GAAAGGAAAATCCACACCAGACTGCAGAATTCTTCACACATAAAATATGAGCCTCCCCATCAGATAGTCTaGGAAAAAGTGCCGCTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: ERKIHTRLQNSSHIKYEPPHQIV*EKVPLN Trigger: GTTAAGCGGCACTTTTTCTCAGACTATCTGATGGGG...AGGCTCATATTTTATGTGTGAAGAATTCTGCAGTCTGGTGTGGATTTTCCTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000126129.8 ENSMUST00000163116.8 |
||
| CDS CCA 90 bp | CAATGGCTGGAATTGGCCAGGGTGCAGTCCTGGCACCACAGGCCATaGGCCGGCGAGGGGCAGAGAAGCAAGGCCAGCAGCGCCAGACCG | + |
|
Preference number: 5 (lower is better) Translates to: QWLELARVQSWHHRP*AGEGQRSKASSARP Trigger: CGGTCTGGCGCTGCTGGCCTTGCTTCTCTGCCCCTCGCCGGCCCATGGCCTGTGGTGCCAGGACTGCACCCTGGCCAATTCCAGCCATTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
||
| CDS GCA 90 bp | TGGGCTGGCACTGCTTCGGAGCGCAATGGCTGGAATTGGCCAGGGTaGAGTCCTGGCACCACAGGCCATGGGCCGGCGAGGGGCAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: WAGTASERNGWNWPG*SPGTTGHGPARGRE Trigger: TTCTCTGCCCCTCGCCGGCCCATGGCCTGTGGTGCCAGGACTGCACCCTGGCCAATTCCAGCCATTGCGCTCCGAAGCAGTGCCAGCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
||
| CDS CCA 90 bp | CACTGCTTCGGAGCGCAATGGCTGGAATTGGCCAGGGTGCAGTCCTaGCACCACAGGCCATGGGCCGGCGAGGGGCAGAGAAGCAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HCFGAQWLELARVQS*HHRPWAGEGQRSKA Trigger: GGCCTTGCTTCTCTGCCCCTCGCCGGCCCATGGCCTGTGGTGCCAGGACTGCACCCTGGCCAATTCCAGCCATTGCGCTCCGAAGCAGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
||
| CDS GCA 90 bp | GCAGAGAAGCAAGGCCAGCAGCGCCAGACCGAGGCTCTTCATGGCTaGAGGCAGCATGCTCCGATAGGGCCTGAAAGAGGCGCGGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AEKQGQQRQTEALHG*RQHAPIGPERGAGA Trigger: AGCCCCCGCGCCTCTTTCAGGCCCTATCGGAGCATGCTGCCTGCAGCCATGAAGAGCCTCGGTCTGGCGCTGCTGGCCTTGCTTCTCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000127095.8 ENSMUST00000156032.2 |
||
| CDS CCA 90 bp | CACAAACGGTATCGGTGGGCTGGCACTGCTTCGGAGCGCAATGGCTaGAATTGGCCAGGGTGCAGTCCTGGCACCACAGGCCATGGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: HKRYRWAGTASERNG*NWPGCSPGTTGHGP Trigger: CGGCCCATGGCCTGTGGTGCCAGGACTGCACCCTGGCCAATTCCAGCCATTGCGCTCCGAAGCAGTGCCAGCCCACCGATACCGTTTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
||
| CDS CCA 90 bp | CTGGGGTCGGTGATCCGCACGCTGGCACAAACGGTATCGGTGGGCTaGCACTGCTTCGGAGCGCAATGGCTGGAATTGGCCAGGGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LGSVIRTLAQTVSVG*HCFGAQWLELARVQ Trigger: CTGCACCCTGGCCAATTCCAGCCATTGCGCTCCGAAGCAGTGCCAGCCCACCGATACCGTTTGTGCCAGCGTGCGGATCACCGACCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
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| CDS GCA 90 bp | TCGGTGATCCGCACGCTGGCACAAACGGTATCGGTGGGCTGGCACTaGTTCGGAGCGCAATGGCTGGAATTGGCCAGGGTGCAGTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: SVIRTLAQTVSVGWH*FGAQWLELARVQSW Trigger: CCAGGACTGCACCCTGGCCAATTCCAGCCATTGCGCTCCGAAGCAGTGCCAGCCCACCGATACCGTTTGTGCCAGCGTGCGGATCACCGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
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| CDS CCA 90 bp | CTGGCACAAACGGTATCGGTGGGCTGGCACTGCTTCGGAGCGCAATaGCTGGAATTGGCCAGGGTGCAGTCCTGGCACCACAGGCCATGG | + |
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Preference number: 5 (lower is better) Translates to: LAQTVSVGWHCFGAQ*LELARVQSWHHRPW Trigger: CCATGGCCTGTGGTGCCAGGACTGCACCCTGGCCAATTCCAGCCATTGCGCTCCGAAGCAGTGCCAGCCCACCGATACCGTTTGTGCCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
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| CDS CCA 72 bp | GGAGCGCAATGGCTGGAATTGGCCAGGGTGCAGTCCTaGCACCACAGGCCATGGGCCGGCGAGGGGCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: GAQWLELARVQS*HHRPWAGEGQR Trigger: TCTCTGCCCCTCGCCGGCCCATGGCCTGTGGTGCCAGGACTGCACCCTGGCCAATTCCAGCCATTGCGCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
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| CDS GCA 72 bp | ACTGCTTCGGAGCGCAATGGCTGGAATTGGCCAGGGTaGAGTCCTGGCACCACAGGCCATGGGCCGGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: TASERNGWNWPG*SPGTTGHGPAR Trigger: CCTCGCCGGCCCATGGCCTGTGGTGCCAGGACTGCACCCTGGCCAATTCCAGCCATTGCGCTCCGAAGCAGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
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| CDS GCA 72 bp | CCCAGCCAGGGCCCAGGGGCTGCGTCCTGCGACCGATaGCCCGTTGCACAAATCTTTCTCGCAGCAGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: PSQGPGAASCDR*PVAQIFLAAVH Trigger: GTGGACTGCTGCGAGAAAGATTTGTGCAACGGGGCATCGGTCGCAGGACGCAGCCCCTGGGCCCTGGCTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
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| CDS GCA 72 bp | CGCACGCTGGCACAAACGGTATCGGTGGGCTGGCACTaGTTCGGAGCGCAATGGCTGGAATTGGCCAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: RTLAQTVSVGWH*FGAQWLELARV Trigger: CACCCTGGCCAATTCCAGCCATTGCGCTCCGAAGCAGTGCCAGCCCACCGATACCGTTTGTGCCAGCGTGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
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| CDS GCA 72 bp | GGGCCCAGGGGCTGCGTCCTGCGACCGATGCCCCGTTaGACAAATCTTTCTCGCAGCAGTCCACGTCGACTT | + |
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Preference number: 6 (lower is better) Translates to: GPRGCVLRPMPR*TNLSRSSPRRL Trigger: AAGTCGACGTGGACTGCTGCGAGAAAGATTTGTGCAACGGGGCATCGGTCGCAGGACGCAGCCCCTGGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
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| CDS CCA 72 bp | ACGGTATCGGTGGGCTGGCACTGCTTCGGAGCGCAATaGCTGGAATTGGCCAGGGTGCAGTCCTGGCACCAC | + |
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Preference number: 6 (lower is better) Translates to: TVSVGWHCFGAQ*LELARVQSWHH Trigger: GTGGTGCCAGGACTGCACCCTGGCCAATTCCAGCCATTGCGCTCCGAAGCAGTGCCAGCCCACCGATACCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
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| CDS CAA 72 bp | AGGGCCCAGGGGCTGCGTCCTGCGACCGATGCCCCGTaGCACAAATCTTTCTCGCAGCAGTCCACGTCGACT | + |
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Preference number: 6 (lower is better) Translates to: RAQGLRPATDAP*HKSFSQQSTST Trigger: AGTCGACGTGGACTGCTGCGAGAAAGATTTGTGCAACGGGGCATCGGTCGCAGGACGCAGCCCCTGGGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
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| CDS CCA 72 bp | GTGATCCGCACGCTGGCACAAACGGTATCGGTGGGCTaGCACTGCTTCGGAGCGCAATGGCTGGAATTGGCC | + |
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Preference number: 6 (lower is better) Translates to: VIRTLAQTVSVG*HCFGAQWLELA Trigger: GGCCAATTCCAGCCATTGCGCTCCGAAGCAGTGCCAGCCCACCGATACCGTTTGTGCCAGCGTGCGGATCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
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| CDS TCA 72 bp | TCACAGAATGATCCTTCCTGCTGCTGCTGGGGTCGGTaGTCCGCACGCTGGCACAAACGGTATCGGTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SQNDPSCCCWGR*SARWHKRYRWA Trigger: AGCCCACCGATACCGTTTGTGCCAGCGTGCGGATCACCGACCCCAGCAGCAGCAGGAAGGATCATTCTGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000023241.12 ENSMUST00000065417.15 ENSMUST00000126129.8 ENSMUST00000127095.8 ENSMUST00000156032.2 ENSMUST00000163116.8 |
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