Pregenerated sensors for LY6G6G (Mus musculus)
Ensembl gene IDs: ENSMUSG00000101026Ensembl transcript IDs: ENSMUST00000186014.2, ENSMUST00000191407.2
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCACCTGCATGTCTCTGAGGATGAAGTTGACCAAGAACCAGAAATaGCCAAGACCCAATACCTCGGACCAAGCAGACCTGAGCATGAAT | + |
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Preference number: 1 (lower is better) Translates to: ATCMSLRMKLTKNQK*PRPNTSDQADLSMN Trigger: ATTCATGCTCAGGTCTGCTTGGTCCGAGGTATTGGGTCTTGGGCATTTCTGGTTCTTGGTCAACTTCATCCTCAGAGACATGCAGGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR CCA 90 bp | TTGCTGCCAGGGAGACAAAGCAGGTTTCTCCATGCCCAGGGAGAATaGATACCCATTCTAATTCCTGACACAAAGCCCAAGATGATCTGC | + |
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Preference number: 1 (lower is better) Translates to: LLPGRQSRFLHAQGE*IPILIPDTKPKMIC Trigger: GCAGATCATCTTGGGCTTTGTGTCAGGAATTAGAATGGGTATCCATTCTCCCTGGGCATGGAGAAACCTGCTTTGTCTCCCTGGCAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR TCA 90 bp | CAGGTTTCTCCATGCCCAGGGAGAATGGATACCCATTCTAATTCCTaGCACAAAGCCCAAGATGATCTGCCTTACCCCTACACATACACA | + |
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Preference number: 1 (lower is better) Translates to: QVSPCPGRMDTHSNS*HKAQDDLPYPYTYT Trigger: TGTGTATGTGTAGGGGTAAGGCAGATCATCTTGGGCTTTGTGTCAGGAATTAGAATGGGTATCCATTCTCCCTGGGCATGGAGAAACCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR CCA 90 bp | AAAGCTGAGGGTTTGTTGTGCTGCCAACACAAAAGTATGGACTTTTaGGGACCAGGGCACACTGTGACAGATGCAAACACTTCACCAGTT | + |
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Preference number: 1 (lower is better) Translates to: KAEGLLCCQHKSMDF*GPGHTVTDANTSPV Trigger: AACTGGTGAAGTGTTTGCATCTGTCACAGTGTGCCCTGGTCCCCAAAAGTCCATACTTTTGTGTTGGCAGCACAACAAACCCTCAGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR GCA 90 bp | GAATGGATACCCATTCTAATTCCTGACACAAAGCCCAAGATGATCTaGCTTACCCCTACACATACACATACTATGGGAAGTCAGGGGATC | + |
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Preference number: 1 (lower is better) Translates to: EWIPILIPDTKPKMI*LTPTHTHTMGSQGI Trigger: GATCCCCTGACTTCCCATAGTATGTGTATGTGTAGGGGTAAGGCAGATCATCTTGGGCTTTGTGTCAGGAATTAGAATGGGTATCCATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCACTACAGACATGGGAGGCCTGAGTCCAAGGCAGAGGCACCACTCCCGCACACCAAGAACCAGAAATaGCCAAGACCCAATACCTCG | + |
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Preference number: 2 (lower is better) Translates to: THYRHGRPESKAEAPLPHTKNQK*PRPNTS Trigger: CGAGGTATTGGGTCTTGGGCATTTCTGGTTCTTGGT...GTGCGGGAGTGGTGCCTCTGCCTTGGACTCAGGCCTCCCATGTCTGTAGTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAGACTTGAAGGGCTCTGGCTCTGCCCCTCAAGAAGAGCCCCTTCCCTCCCCGGAACCCTTCTAGGTTaGGGTGTGATAGAAGTCTTT | + |
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Preference number: 2 (lower is better) Translates to: SRLEGLWLCPSRRAPSLPGTLLG*GVIEVF Trigger: AAAGACTTCTATCACACCCCAACCTAGAAGGGTTCC...GGGGAGGGAAGGGGCTCTTCTTGAGGGGCAGAGCCAGAGCCCTTCAAGTCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAGACTTGAAGGGCTCTGGCTCTGCCCCTCAAGAAGAGCCCCTTCCCTCCCCGAGAGAAGGGAAGATTaGATGTGTCTTGGGGTTAAT | + |
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Preference number: 2 (lower is better) Translates to: SRLEGLWLCPSRRAPSLPERRED*MCLGVN Trigger: ATTAACCCCAAGACACATTCAATCTTCCCTTCTCTC...GGGGAGGGAAGGGGCTCTTCTTGAGGGGCAGAGCCAGAGCCCTTCAAGTCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR-3UTR GCA 90 bp | GAGAGGGTAGTACAAATGCCAAGCCTAAGGTTGAGGGTGGAGGGAGTTGCGAGAGGAGGTGTGTCCTTGTaGCCTCTTGGAAGATTTCCT | + |
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Preference number: 2 (lower is better) Translates to: ERVVQMPSLRLRVEGVARGGVSL*PLGRFP Trigger: AGGAAATCTTCCAAGAGGGCACAAGGACACACCTCC...TCTCGCAACTCCCTCCACCCTCAACCTTAGGCTTGGCATTTGTACTACCCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR-3UTR TCA 90 bp | TTGAGTGGCCTCAGAGTACTGGTGACTGTTCAGAAAGCTGAGGGTTTGTTGTGCGACCAGGGCACACTGTaGCAGATGCAAACACTTCAC | + |
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Preference number: 2 (lower is better) Translates to: LSGLRVLVTVQKAEGLLCDQGTL*QMQTLH Trigger: GTGAAGTGTTTGCATCTGTCACAGTGTGCCCTGGTC...GCACAACAAACCCTCAGCTTTCTGAACAGTCACCAGTACTCTGAGGCCACTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR-3UTR CCA 90 bp | AATTTCACTTGGCACTGTCTCATGGCCACCTGCATGTCTCTGAGGATGAAGTTGCTCCTAGGACAGCATTaGGGAAGGAGTGGCGAGATG | + |
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Preference number: 2 (lower is better) Translates to: NFTWHCLMATCMSLRMKLLLGQH*GRSGEM Trigger: CATCTCGCCACTCCTTCCCCAATGCTGTCCTAGGAG...CAACTTCATCCTCAGAGACATGCAGGTGGCCATGAGACAGTGCCAAGTGAAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR-3UTR GCA 90 bp | TATGGACTTTTGGGGACCAGGGCACACTGTGACAGATGCAAACACTTCACCAGTAAGCAGGTTTCTCCATaGCCAGGGAGAATGGATACC | + |
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Preference number: 2 (lower is better) Translates to: YGLLGTRAHCDRCKHFTSKQVSP*PGRMDT Trigger: GGTATCCATTCTCCCTGGGCATGGAGAAACCTGCTT...ACTGGTGAAGTGTTTGCATCTGTCACAGTGTGCCCTGGTCCCCAAAAGTCCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGAGGTGAGGGTCTTGGGGAGGTGTGTCCTTGTGCCCTCTTGGAAGATTTCCGAGAGAAGGGAAGATTaGATGTGTCTTGGGGTTAAT | + |
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Preference number: 2 (lower is better) Translates to: IEVRVLGRCVLVPSWKISERRED*MCLGVN Trigger: ATTAACCCCAAGACACATTCAATCTTCCCTTCTCTC...GGAAATCTTCCAAGAGGGCACAAGGACACACCTCCCCAAGACCCTCACCTCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR-3UTR GCA 90 bp | GCATTGGGGAAGGAGTGGCGAGATGTTGCTGCCAGGGAGACAAAGCAGGTTTCTCAAATCTTACAATCATaGCATATGCCAGGGTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: ALGKEWRDVAARETKQVSQILQS*HMPGLL Trigger: AAGCAACCCTGGCATATGGCATGATTGTAAGATTTG...AGAAACCTGCTTTGTCTCCCTGGCAGCAACATCTCGCCACTCCTTCCCCAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGGAGTGGCGAGATGTTGCTGCCAGGGAGACAAAGCAGGTTTCTCCATGCCCTGTTCAGTTAGACAGTaGCCAAATCTTACAATCATG | + |
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Preference number: 2 (lower is better) Translates to: EGVARCCCQGDKAGFSMPCSVRQ*PNLTIM Trigger: CATGATTGTAAGATTTGGGCACTGTCTAACTGAACA...GGGCATGGAGAAACCTGCTTTGTCTCCCTGGCAGCAACATCTCGCCACTCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR-3UTR GCA 90 bp | TGCATGTCTCTGAGGATGAAGTTGACCAAGAACCAGAAATGCCCAAGACCCAATGGAGGTGTGTCCTTGTaGCCTCTTGGAAGATTTCCT | + |
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Preference number: 2 (lower is better) Translates to: CMSLRMKLTKNQKCPRPNGGVSL*PLGRFP Trigger: AGGAAATCTTCCAAGAGGGCACAAGGACACACCTCC...ATTGGGTCTTGGGCATTTCTGGTTCTTGGTCAACTTCATCCTCAGAGACATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR-3UTR TCA 90 bp | TGCATGTCTCTGAGGATGAAGTTGACCAAGAACCAGAAATGCCCAAGACCCAATGGATCTTTTAAAAGCTaGTGTTCAGTTAGACAGTGC | + |
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Preference number: 2 (lower is better) Translates to: CMSLRMKLTKNQKCPRPNGSFKS*CSVRQC Trigger: GCACTGTCTAACTGAACATCAGCTTTTAAAAGATCC...ATTGGGTCTTGGGCATTTCTGGTTCTTGGTCAACTTCATCCTCAGAGACATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR TCA 72 bp | TTTGGCCAATGCGACTCACTACAGACATGGGAGGCCTaGGTCCAAGGCAGAGGCACCACTCCCGCACCTGGG | + |
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Preference number: 3 (lower is better) Translates to: FGQCDSLQTWEA*VQGRGTTPAPG Trigger: CCCAGGTGCGGGAGTGGTGCCTCTGCCTTGGACTCAGGCCTCCCATGTCTGTAGTGAGTCGCATTGGCCAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR-3UTR CAA 90 bp | TCCAGACTTGAAGGGCTCTGGCTCTGCCCCTCAAGAAGAGCCCCTTCCCTCCCCGGGAACCCTTCTAGGTaGGGGTGTGATAGAAGTCTT | + |
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Preference number: 3 (lower is better) Translates to: SRLEGLWLCPSRRAPSLPGNPSR*GCDRSL Trigger: AAGACTTCTATCACACCCCAACCTAGAAGGGTTCCC...GGGGAGGGAAGGGGCTCTTCTTGAGGGGCAGAGCCAGAGCCCTTCAAGTCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR-3UTR CAA 90 bp | ACTCACTACAGACATGGGAGGCCTGAGTCCAAGGCAGAGGCACCACTCCCGCACAAGATTGAATGTGTCTaGGGGTTAATGATGAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: THYRHGRPESKAEAPLPHKIECV*GLMMRE Trigger: CTCTCTCATCATTAACCCCAAGACACATTCAATCTT...GTGCGGGAGTGGTGCCTCTGCCTTGGACTCAGGCCTCCCATGTCTGTAGTGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR-3UTR CAA 90 bp | TATGGACTTTTGGGGACCAGGGCACACTGTGACAGATGCAAACACTTCACCAGTATAGAGGTGAGGGTCTaGGGGAGGTGTGTCCTTGTG | + |
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Preference number: 3 (lower is better) Translates to: YGLLGTRAHCDRCKHFTSIEVRV*GRCVLV Trigger: CACAAGGACACACCTCCCCAAGACCCTCACCTCTAT...ACTGGTGAAGTGTTTGCATCTGTCACAGTGTGCCCTGGTCCCCAAAAGTCCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR-3UTR CAA 90 bp | TATGGACTTTTGGGGACCAGGGCACACTGTGACAGATGCAAACACTTCACCAGTTGGGGAGGTGTGTCCTaGTGCCCTCTTGGAAGATTT | + |
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Preference number: 3 (lower is better) Translates to: YGLLGTRAHCDRCKHFTSWGGVS*CPLGRF Trigger: AAATCTTCCAAGAGGGCACAAGGACACACCTCCCCA...ACTGGTGAAGTGTTTGCATCTGTCACAGTGTGCCCTGGTCCCCAAAAGTCCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR CCA 72 bp | ATGAATTCTTCTCCTAGGACAGCATTGGGGAAGGAGTaGCGAGATGTTGCTGCCAGGGAGACAAAGCAGGTT | + |
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Preference number: 3 (lower is better) Translates to: MNSSPRTALGKE*RDVAARETKQV Trigger: AACCTGCTTTGTCTCCCTGGCAGCAACATCTCGCCACTCCTTCCCCAATGCTGTCCTAGGAGAAGAATTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR TCA 72 bp | CCATGCCCAGGGAGAATGGATACCCATTCTAATTCCTaGCACAAAGCCCAAGATGATCTGCCTTACCCCTAC | + |
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Preference number: 3 (lower is better) Translates to: PCPGRMDTHSNS*HKAQDDLPYPY Trigger: GTAGGGGTAAGGCAGATCATCTTGGGCTTTGTGTCAGGAATTAGAATGGGTATCCATTCTCCCTGGGCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR GCA 72 bp | ATGTCTCTGAGGATGAAGTTGACCAAGAACCAGAAATaGCCAAGACCCAATACCTCGGACCAAGCAGACCTG | + |
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Preference number: 3 (lower is better) Translates to: MSLRMKLTKNQK*PRPNTSDQADL Trigger: CAGGTCTGCTTGGTCCGAGGTATTGGGTCTTGGGCATTTCTGGTTCTTGGTCAACTTCATCCTCAGAGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR CCA 72 bp | GGGAGACAAAGCAGGTTTCTCCATGCCCAGGGAGAATaGATACCCATTCTAATTCCTGACACAAAGCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: GRQSRFLHAQGE*IPILIPDTKPK Trigger: CTTGGGCTTTGTGTCAGGAATTAGAATGGGTATCCATTCTCCCTGGGCATGGAGAAACCTGCTTTGTCTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR TCA 72 bp | GAGTGGCCTCAGAGTACTGGTGACTGTTCAGAAAGCTaGGGGTTTGTTGTGCTGCCAACACAAAAGTATGGA | + |
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Preference number: 3 (lower is better) Translates to: EWPQSTGDCSES*GFVVLPTQKYG Trigger: TCCATACTTTTGTGTTGGCAGCACAACAAACCCTCAGCTTTCTGAACAGTCACCAGTACTCTGAGGCCACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR CCA 72 bp | GGTTTGTTGTGCTGCCAACACAAAAGTATGGACTTTTaGGGACCAGGGCACACTGTGACAGATGCAAACACT | + |
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Preference number: 3 (lower is better) Translates to: GLLCCQHKSMDF*GPGHTVTDANT Trigger: AGTGTTTGCATCTGTCACAGTGTGCCCTGGTCCCCAAAAGTCCATACTTTTGTGTTGGCAGCACAACAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR-3UTR CAA 90 bp | GAGAGGGTAGTACAAATGCCAAGCCTAAGGTTGAGGGTGGAGGGAGTTGCGAGAAAGATTGAATGTGTCTaGGGGTTAATGATGAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: ERVVQMPSLRLRVEGVARKIECV*GLMMRE Trigger: CTCTCTCATCATTAACCCCAAGACACATTCAATCTT...TCTCGCAACTCCCTCCACCCTCAACCTTAGGCTTGGCATTTGTACTACCCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR-3UTR CAA 90 bp | TATGGACTTTTGGGGACCAGGGCACACTGTGACAGATGCAAACACTTCACCAGTTCTTTTTCCTCTATTTaGGCCAATGCGACTCACTAC | + |
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Preference number: 3 (lower is better) Translates to: YGLLGTRAHCDRCKHFTSSFSSI*ANATHY Trigger: GTAGTGAGTCGCATTGGCCAAAATAGAGGAAAAAGA...ACTGGTGAAGTGTTTGCATCTGTCACAGTGTGCCCTGGTCCCCAAAAGTCCATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR GCA 72 bp | CCCATTCTAATTCCTGACACAAAGCCCAAGATGATCTaGCTTACCCCTACACATACACATACTATGGGAAGT | + |
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Preference number: 3 (lower is better) Translates to: PILIPDTKPKMI*LTPTHTHTMGS Trigger: ACTTCCCATAGTATGTGTATGTGTAGGGGTAAGGCAGATCATCTTGGGCTTTGTGTCAGGAATTAGAATGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| CDS-3UTR TCA 90 bp | GAAGGAGTGGCGAGATGTTGCTGCCAGGGAGACAAAGCAGGTTTCTCCATGCCCGCTGCCGGTCAGGCCTaGGGCAGCACTGCGGTTGCA | + |
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Preference number: 4 (lower is better) Translates to: EGVARCCCQGDKAGFSMPAAGQA*GSTAVA Trigger: TGCAACCGCAGTGCTGCCTCAGGCCTGACCGGCAGC...GGGCATGGAGAAACCTGCTTTGTCTCCCTGGCAGCAACATCTCGCCACTCCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| CDS-3UTR TCA 90 bp | ACTCACTACAGACATGGGAGGCCTGAGTCCAAGGCAGAGGCACCACTCCCGCACGGGCGCAGGACTTCATaGCCAGGATGCCACCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: THYRHGRPESKAEAPLPHGRRTS*PGCHQD Trigger: ATCCTGGTGGCATCCTGGTCATGAAGTCCTGCGCCC...GTGCGGGAGTGGTGCCTCTGCCTTGGACTCAGGCCTCCCATGTCTGTAGTGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| CDS-3UTR TCA 90 bp | CTAGGCTCTGGGGCAGGAGCCTTTGGGACAGGTGTAGTTAACTTCCTTTCTGTGGCTGCCGGTCAGGCCTaGGGCAGCACTGCGGTTGCA | + |
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Preference number: 4 (lower is better) Translates to: LGSGAGAFGTGVVNFLSVAAGQA*GSTAVA Trigger: TGCAACCGCAGTGCTGCCTCAGGCCTGACCGGCAGC...CACAGAAAGGAAGTTAACTACACCTGTCCCAAAGGCTCCTGCCCCAGAGCCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| CDS-3UTR GCA 90 bp | GCATTGGGGAAGGAGTGGCGAGATGTTGCTGCCAGGGAGACAAAGCAGGTTTCTCAGCACACATGGCAGTaGAGGGCCCGGGCCAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: ALGKEWRDVAARETKQVSQHTWQ*RARARE Trigger: TTCTCTGGCCCGGGCCCTGCACTGCCATGTGTGCTG...AGAAACCTGCTTTGTCTCCCTGGCAGCAACATCTCGCCACTCCTTCCCCAATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186014.2 |
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| CDS-3UTR TCA 90 bp | GCATTGGGGAAGGAGTGGCGAGATGTTGCTGCCAGGGAGACAAAGCAGGTTTCTGGGCGCAGGACTTCATaGCCAGGATGCCACCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: ALGKEWRDVAARETKQVSGRRTS*PGCHQD Trigger: ATCCTGGTGGCATCCTGGTCATGAAGTCCTGCGCCC...AGAAACCTGCTTTGTCTCCCTGGCAGCAACATCTCGCCACTCCTTCCCCAATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| CDS-3UTR GCA 90 bp | ACCTGCATGTCTCTGAGGATGAAGTTGACCAAGAACCAGAAATGCCCAAGACCCGGCCTGAGGCAGCACTaGGGTTGCACTGGCTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: TCMSLRMKLTKNQKCPRPGLRQH*GCTGSP Trigger: AGGGGAGCCAGTGCAACCGCAGTGCTGCCTCAGGCC...GGGTCTTGGGCATTTCTGGTTCTTGGTCAACTTCATCCTCAGAGACATGCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| CDS-3UTR CCA 90 bp | CTAGGCTCTGGGGCAGGAGCCTTTGGGACAGGTGTAGTTAACTTCCTTTCTGTGGCTGTTGGGGCAGGTTaGGGCGCAGGACTTCATGAC | + |
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Preference number: 4 (lower is better) Translates to: LGSGAGAFGTGVVNFLSVAVGAG*GAGLHD Trigger: GTCATGAAGTCCTGCGCCCCAACCTGCCCCAACAGC...CACAGAAAGGAAGTTAACTACACCTGTCCCAAAGGCTCCTGCCCCAGAGCCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR CAA 72 bp | CTCCTAGGACAGCATTGGGGAAGGAGTGGCGAGATGTaGCTGCCAGGGAGACAAAGCAGGTTTCTCCATGCC | + |
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Preference number: 4 (lower is better) Translates to: LLGQHWGRSGEM*LPGRQSRFLHA Trigger: GGCATGGAGAAACCTGCTTTGTCTCCCTGGCAGCAACATCTCGCCACTCCTTCCCCAATGCTGTCCTAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| CDS-3UTR GCA 90 bp | GAGAGGGTAGTACAAATGCCAAGCCTAAGGTTGAGGGTGGAGGGAGTTGCGAGACATCTGAAGACACGGTaGTGTTGGGGCAGGTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: ERVVQMPSLRLRVEGVARHLKTR*CWGRLG Trigger: CCCCAACCTGCCCCAACAGCACCGTGTCTTCAGATG...TCTCGCAACTCCCTCCACCCTCAACCTTAGGCTTGGCATTTGTACTACCCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| CDS-3UTR GCA 90 bp | GAGACAAAGCAGGTTTCTCCATGCCCAGGGAGAATGGATACCCATTCTAATTCCGGCCTGAGGCAGCACTaGGGTTGCACTGGCTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: ETKQVSPCPGRMDTHSNSGLRQH*GCTGSP Trigger: AGGGGAGCCAGTGCAACCGCAGTGCTGCCTCAGGCC...GGAATTAGAATGGGTATCCATTCTCCCTGGGCATGGAGAAACCTGCTTTGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| CDS-3UTR GCA 90 bp | GAGACAAAGCAGGTTTCTCCATGCCCAGGGAGAATGGATACCCATTCTAATTCCAGGCAGCACTGCGGTTaGACTGGCTCCCCTGACAGC | + |
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Preference number: 4 (lower is better) Translates to: ETKQVSPCPGRMDTHSNSRQHCG*TGSPDS Trigger: GCTGTCAGGGGAGCCAGTGCAACCGCAGTGCTGCCT...GGAATTAGAATGGGTATCCATTCTCCCTGGGCATGGAGAAACCTGCTTTGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR CAA 72 bp | TCCCAGGACTCTGAAGGTCTCATAGAGGTGAGGGTCTaGGGGAGGTGTGTCCTTGTGCCCTCTTGGAAGATT | + |
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Preference number: 4 (lower is better) Translates to: SQDSEGLIEVRV*GRCVLVPSWKI Trigger: AATCTTCCAAGAGGGCACAAGGACACACCTCCCCAAGACCCTCACCTCTATGAGACCTTCAGAGTCCTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| CDS-3UTR GCA 90 bp | TTGAGTGGCCTCAGAGTACTGGTGACTGTTCAGAAAGCTGAGGGTTTGTTGTGCCATCTGAAGACACGGTaGTGTTGGGGCAGGTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LSGLRVLVTVQKAEGLLCHLKTR*CWGRLG Trigger: CCCCAACCTGCCCCAACAGCACCGTGTCTTCAGATG...GCACAACAAACCCTCAGCTTTCTGAACAGTCACCAGTACTCTGAGGCCACTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| CDS-3UTR GCA 90 bp | TGCATGTCTCTGAGGATGAAGTTGACCAAGAACCAGAAATGCCCAAGACCCAATAGGCAGCACTGCGGTTaGACTGGCTCCCCTGACAGC | + |
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Preference number: 4 (lower is better) Translates to: CMSLRMKLTKNQKCPRPNRQHCG*TGSPDS Trigger: GCTGTCAGGGGAGCCAGTGCAACCGCAGTGCTGCCT...ATTGGGTCTTGGGCATTTCTGGTTCTTGGTCAACTTCATCCTCAGAGACATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR CAA 72 bp | AGAGAGGAGAGGGTAGTACAAATGCCAAGCCTAAGGTaGAGGGTGGAGGGAGTTGCGAGAAACATCGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: REERVVQMPSLR*RVEGVARNIGS Trigger: AGAGCCGATGTTTCTCGCAACTCCCTCCACCCTCAACCTTAGGCTTGGCATTTGTACTACCCTCTCCTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| CDS-3UTR CCA 90 bp | TGCATGTCTCTGAGGATGAAGTTGACCAAGAACCAGAAATGCCCAAGACCCAATGCTGTTGGGGCAGGTTaGGGCGCAGGACTTCATGAC | + |
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Preference number: 4 (lower is better) Translates to: CMSLRMKLTKNQKCPRPNAVGAG*GAGLHD Trigger: GTCATGAAGTCCTGCGCCCCAACCTGCCCCAACAGC...ATTGGGTCTTGGGCATTTCTGGTTCTTGGTCAACTTCATCCTCAGAGACATGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| CDS-3UTR CCA 90 bp | AATTTCACTTGGCACTGTCTCATGGCCACCTGCATGTCTCTGAGGATGAAGTTGGGATGCCACCAGGATTaGCCAGAGAAGCACACACAA | + |
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Preference number: 4 (lower is better) Translates to: NFTWHCLMATCMSLRMKLGCHQD*PEKHTQ Trigger: TTGTGTGTGCTTCTCTGGCCAATCCTGGTGGCATCC...CAACTTCATCCTCAGAGACATGCAGGTGGCCATGAGACAGTGCCAAGTGAAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191407.2 |
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| 3UTR CAA 72 bp | TGTCTCATGGCCACCTGCATGTCTCTGAGGATGAAGTaGACCAAGAACCAGAAATGCCCAAGACCCAATACC | + |
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Preference number: 4 (lower is better) Translates to: CLMATCMSLRMK*TKNQKCPRPNT Trigger: GGTATTGGGTCTTGGGCATTTCTGGTTCTTGGTCAACTTCATCCTCAGAGACATGCAGGTGGCCATGAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| 3UTR CAA 72 bp | GGGTTTGTTGTGCTGCCAACACAAAAGTATGGACTTTaGGGGACCAGGGCACACTGTGACAGATGCAAACAC | + |
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Preference number: 4 (lower is better) Translates to: GFVVLPTQKYGL*GTRAHCDRCKH Trigger: GTGTTTGCATCTGTCACAGTGTGCCCTGGTCCCCAAAAGTCCATACTTTTGTGTTGGCAGCACAACAAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| CDS TCA 90 bp | CTGCCGGTCAGGCCTGAGGCAGCACTGCGGTTGCACTGGCTCCCCTaGCAGCAGGAGACAGAGAGGGCACGGCCATCTGAAGACACGGTG | + |
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Preference number: 5 (lower is better) Translates to: LPVRPEAALRLHWLP*QQETERARPSEDTV Trigger: CACCGTGTCTTCAGATGGCCGTGCCCTCTCTGTCTCCTGCTGTCAGGGGAGCCAGTGCAACCGCAGTGCTGCCTCAGGCCTGACCGGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| CDS GCA 90 bp | TCCACGAGAGACTCGCAGTTCTCGTGCCCACAGCACACATGGCAGTaGAGGGCCCGGGCCAGAGAAGCACACACAACAGCCAACAGCAAC | + |
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Preference number: 5 (lower is better) Translates to: STRDSQFSCPQHTWQ*RARAREAHTTANSN Trigger: GTTGCTGTTGGCTGTTGTGTGTGCTTCTCTGGCCCGGGCCCTGCACTGCCATGTGTGCTGTGGGCACGAGAACTGCGAGTCTCTCGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186014.2 |
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| CDS TCA 90 bp | CTGAAGACACGGTGCTGTTGGGGCAGGTTGGGGCGCAGGACTTCATaGCCAGGATGCCACCAGGATTGGCCAGAGAAGCACACACAACAG | + |
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Preference number: 5 (lower is better) Translates to: LKTRCCWGRLGRRTS*PGCHQDWPEKHTQQ Trigger: CTGTTGTGTGTGCTTCTCTGGCCAATCCTGGTGGCATCCTGGTCATGAAGTCCTGCGCCCCAACCTGCCCCAACAGCACCGTGTCTTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191407.2 |
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| CDS-3UTR CAA 90 bp | GAAGGAGTGGCGAGATGTTGCTGCCAGGGAGACAAAGCAGGTTTCTCCATGCCCAGGATGCCACCAGGATaGGCCAGAGAAGCACACACA | + |
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Preference number: 5 (lower is better) Translates to: EGVARCCCQGDKAGFSMPRMPPG*AREAHT Trigger: TGTGTGTGCTTCTCTGGCCAATCCTGGTGGCATCCT...GGGCATGGAGAAACCTGCTTTGTCTCCCTGGCAGCAACATCTCGCCACTCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191407.2 |
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| CDS GCA 72 bp | CAAGGCTGCCGGTCAGGCCTGAGGCAGCACTGCGGTTaGACTGGCTCCCCTGACAGCAGGAGACAGAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: QGCRSGLRQHCG*TGSPDSRRQRG Trigger: CCCTCTCTGTCTCCTGCTGTCAGGGGAGCCAGTGCAACCGCAGTGCTGCCTCAGGCCTGACCGGCAGCCTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| CDS TCA 72 bp | AGGCCTGAGGCAGCACTGCGGTTGCACTGGCTCCCCTaGCAGCAGGAGACAGAGAGGGCACGGCCATCTGAA | + |
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Preference number: 6 (lower is better) Translates to: RPEAALRLHWLP*QQETERARPSE Trigger: TTCAGATGGCCGTGCCCTCTCTGTCTCCTGCTGTCAGGGGAGCCAGTGCAACCGCAGTGCTGCCTCAGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| CDS GCA 72 bp | GACTCGCAGTTCTCGTGCCCACAGCACACATGGCAGTaGAGGGCCCGGGCCAGAGAAGCACACACAACAGCC | + |
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Preference number: 6 (lower is better) Translates to: DSQFSCPQHTWQ*RARAREAHTTA Trigger: GGCTGTTGTGTGTGCTTCTCTGGCCCGGGCCCTGCACTGCCATGTGTGCTGTGGGCACGAGAACTGCGAGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186014.2 |
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| CDS CAA 90 bp | CAGCAGGAGACAGAGAGGGCACGGCCATCTGAAGACACGGTGCTGTaGGGGCAGGTTGGGGCGCAGGACTTCATGACCAGGATGCCACCA | + |
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Preference number: 6 (lower is better) Translates to: QQETERARPSEDTVL*GQVGAQDFMTRMPP Trigger: TGGTGGCATCCTGGTCATGAAGTCCTGCGCCCCAACCTGCCCCAACAGCACCGTGTCTTCAGATGGCCGTGCCCTCTCTGTCTCCTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| CDS TCA 72 bp | CGGTGCTGTTGGGGCAGGTTGGGGCGCAGGACTTCATaGCCAGGATGCCACCAGGATTGGCCAGAGAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: RCCWGRLGRRTS*PGCHQDWPEKH Trigger: GTGCTTCTCTGGCCAATCCTGGTGGCATCCTGGTCATGAAGTCCTGCGCCCCAACCTGCCCCAACAGCACCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191407.2 |
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| CDS CAA 72 bp | ACAGAGAGGGCACGGCCATCTGAAGACACGGTGCTGTaGGGGCAGGTTGGGGCGCAGGACTTCATGACCAGG | + |
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Preference number: 6 (lower is better) Translates to: TERARPSEDTVL*GQVGAQDFMTR Trigger: CCTGGTCATGAAGTCCTGCGCCCCAACCTGCCCCAACAGCACCGTGTCTTCAGATGGCCGTGCCCTCTCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186014.2 ENSMUST00000191407.2 |
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| CDS CAA 72 bp | CCACCAGGATTGGTGGCCCGAGTGATCACACAGTACTaGTCCGTCAAGGCGCACTCCACGAGAGACTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: PPGLVARVITQY*SVKAHSTRDSQ Trigger: CTGCGAGTCTCTCGTGGAGTGCGCCTTGACGGACAAGTACTGTGTGATCACTCGGGCCACCAATCCTGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186014.2 |
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| CDS CAA 90 bp | ACCAGGATGCCACCAGGATTGGTGGCCCGAGTGATCACACAGTACTaGTCCGTCAAGGCGCACTCCACGAGAGACTCGCAGTTCTCGTGC | + |
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Preference number: 6 (lower is better) Translates to: TRMPPGLVARVITQY*SVKAHSTRDSQFSC Trigger: GCACGAGAACTGCGAGTCTCTCGTGGAGTGCGCCTTGACGGACAAGTACTGTGTGATCACTCGGGCCACCAATCCTGGTGGCATCCTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186014.2 |
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| CDS CAA 72 bp | GGGGCGCAGGACTTCATGACCAGGATGCCACCAGGATaGGCCAGAGAAGCACACACAACAGCCAACAGCAAC | + |
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Preference number: 6 (lower is better) Translates to: GAQDFMTRMPPG*AREAHTTANSN Trigger: GTTGCTGTTGGCTGTTGTGTGTGCTTCTCTGGCCAATCCTGGTGGCATCCTGGTCATGAAGTCCTGCGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191407.2 |
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