Pregenerated sensors for LY6G6F (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034923Ensembl transcript IDs: ENSMUST00000038507.7
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTGCTTCCTTATGTTGTCCCTGGCCCCTCCAGCTTGGTGGCTCTTaGAAGCCCAGTACGAGTCACACCCTCAGCCACCCCTTGGCCAAA | + |
|
Preference number: 1 (lower is better) Translates to: TASLCCPWPLQLGGS*KPSTSHTLSHPLAK Trigger: TTTGGCCAAGGGGTGGCTGAGGGTGTGACTCGTACTGGGCTTCCAAGAGCCACCAAGCTGGAGGGGCCAGGGACAACATAAGGAAGCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| 3UTR CCA 90 bp | CGATGTTACTGCTTCCTTATGTTGTCCCTGGCCCCTCCAGCTTGGTaGCTCTTGGAAGCCCAGTACGAGTCACACCCTCAGCCACCCCTT | + |
|
Preference number: 1 (lower is better) Translates to: RCYCFLMLSLAPPAW*LLEAQYESHPQPPL Trigger: AAGGGGTGGCTGAGGGTGTGACTCGTACTGGGCTTCCAAGAGCCACCAAGCTGGAGGGGCCAGGGACAACATAAGGAAGCAGTAACATCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| 3UTR CCA 90 bp | GAACGATGTTACTGCTTCCTTATGTTGTCCCTGGCCCCTCCAGCTTaGTGGCTCTTGGAAGCCCAGTACGAGTCACACCCTCAGCCACCC | + |
|
Preference number: 1 (lower is better) Translates to: ERCYCFLMLSLAPPA*WLLEAQYESHPQPP Trigger: GGGTGGCTGAGGGTGTGACTCGTACTGGGCTTCCAAGAGCCACCAAGCTGGAGGGGCCAGGGACAACATAAGGAAGCAGTAACATCGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| 3UTR CAA 90 bp | TACTGCTTCCTTATGTTGTCCCTGGCCCCTCCAGCTTGGTGGCTCTaGGAAGCCCAGTACGAGTCACACCCTCAGCCACCCCTTGGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: YCFLMLSLAPPAWWL*EAQYESHPQPPLGQ Trigger: TTGGCCAAGGGGTGGCTGAGGGTGTGACTCGTACTGGGCTTCCAAGAGCCACCAAGCTGGAGGGGCCAGGGACAACATAAGGAAGCAGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| 3UTR CAA 90 bp | AGAACGATGTTACTGCTTCCTTATGTTGTCCCTGGCCCCTCCAGCTaGGTGGCTCTTGGAAGCCCAGTACGAGTCACACCCTCAGCCACC | + |
|
Preference number: 2 (lower is better) Translates to: RTMLLLPYVVPGPSS*VALGSPVRVTPSAT Trigger: GGTGGCTGAGGGTGTGACTCGTACTGGGCTTCCAAGAGCCACCAAGCTGGAGGGGCCAGGGACAACATAAGGAAGCAGTAACATCGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| 3UTR CCA 72 bp | TTATGTTGTCCCTGGCCCCTCCAGCTTGGTGGCTCTTaGAAGCCCAGTACGAGTCACACCCTCAGCCACCCC | + |
|
Preference number: 3 (lower is better) Translates to: LCCPWPLQLGGS*KPSTSHTLSHP Trigger: GGGGTGGCTGAGGGTGTGACTCGTACTGGGCTTCCAAGAGCCACCAAGCTGGAGGGGCCAGGGACAACATAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| 3UTR GCA 72 bp | CCACCCCTTGGCCAAAGTTCCAGGGAATCCTTCAGGTaGCAGTGGCTAGAGACACAGGACTGTGGGTCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: PPLGQSSRESFR*QWLETQDCGSG Trigger: GCCTGACCCACAGTCCTGTGTCTCTAGCCACTGGCACCTGAAGGATTCCCTGGAACTTTGGCCAAGGGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| 3UTR CCA 72 bp | GGAAGCCCAGTACGAGTCACACCCTCAGCCACCCCTTaGCCAAAGTTCCAGGGAATCCTTCAGGTGCCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: GSPVRVTPSATP*PKFQGILQVPV Trigger: CACTGGCACCTGAAGGATTCCCTGGAACTTTGGCCAAGGGGTGGCTGAGGGTGTGACTCGTACTGGGCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| 3UTR CCA 72 bp | TGCTTCCTTATGTTGTCCCTGGCCCCTCCAGCTTGGTaGCTCTTGGAAGCCCAGTACGAGTCACACCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: CFLMLSLAPPAW*LLEAQYESHPQ Trigger: CTGAGGGTGTGACTCGTACTGGGCTTCCAAGAGCCACCAAGCTGGAGGGGCCAGGGACAACATAAGGAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| 3UTR CCA 72 bp | TACTGCTTCCTTATGTTGTCCCTGGCCCCTCCAGCTTaGTGGCTCTTGGAAGCCCAGTACGAGTCACACCCT | + |
|
Preference number: 3 (lower is better) Translates to: YCFLMLSLAPPA*WLLEAQYESHP Trigger: AGGGTGTGACTCGTACTGGGCTTCCAAGAGCCACCAAGCTGGAGGGGCCAGGGACAACATAAGGAAGCAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| 3UTR CCA 72 bp | CTTGGCCAAAGTTCCAGGGAATCCTTCAGGTGCCAGTaGCTAGAGACACAGGACTGTGGGTCAGGCTTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LGQSSRESFRCQ*LETQDCGSGFS Trigger: GGAAAAGCCTGACCCACAGTCCTGTGTCTCTAGCCACTGGCACCTGAAGGATTCCCTGGAACTTTGGCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| 3UTR CCA 72 bp | TCACAGAACGATGTTACTGCTTCCTTATGTTGTCCCTaGCCCCTCCAGCTTGGTGGCTCTTGGAAGCCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: SQNDVTASLCCP*PLQLGGSWKPS Trigger: ACTGGGCTTCCAAGAGCCACCAAGCTGGAGGGGCCAGGGACAACATAAGGAAGCAGTAACATCGTTCTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS-3UTR CCA 90 bp | TTGTCCCTGGCCCCTCCAGCTTGGTGGCTCTTGGAAGCCCAGTACGAGTCACACGAGCCACCAAGATGGTaGAGGAGCCTGCTACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLAPPAWWLLEAQYESHEPPRW*RSLLQG Trigger: GCCCTGTAGCAGGCTCCTCCACCATCTTGGTGGCTC...GTGTGACTCGTACTGGGCTTCCAAGAGCCACCAAGCTGGAGGGGCCAGGGACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS-3UTR CCA 90 bp | CCCTCCAGCTTGGTGGCTCTTGGAAGCCCAGTACGAGTCACACCCTCAGCCACCGGTCTTGTGGTTAGGTaGGCTAAGGCGGGCCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSSLVALGSPVRVTPSATGLVVR*AKAGQV Trigger: CACTTGGCCCGCCTTAGCCCACCTAACCACAAGACC...GGTGGCTGAGGGTGTGACTCGTACTGGGCTTCCAAGAGCCACCAAGCTGGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| 3UTR CAA 72 bp | CTTATGTTGTCCCTGGCCCCTCCAGCTTGGTGGCTCTaGGAAGCCCAGTACGAGTCACACCCTCAGCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: LMLSLAPPAWWL*EAQYESHPQPP Trigger: GGGTGGCTGAGGGTGTGACTCGTACTGGGCTTCCAAGAGCCACCAAGCTGGAGGGGCCAGGGACAACATAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS-3UTR GCA 90 bp | CGAGTCACACCCTCAGCCACCCCTTGGCCAAAGTTCCAGGGAATCCTTCAGGTGGATGGTGGAGGAGCCTaGTACAGGGCTGCGGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: RVTPSATPWPKFQGILQVDGGGA*YRAAEP Trigger: TGGTTCCGCAGCCCTGTAGCAGGCTCCTCCACCATC...CACCTGAAGGATTCCCTGGAACTTTGGCCAAGGGGTGGCTGAGGGTGTGACTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS-3UTR CCA 90 bp | TCCTTATGTTGTCCCTGGCCCCTCCAGCTTGGTGGCTCTTGGAAGCCCAGTACGCAGGAAGCCCCTCTGTaGGACACACCAAGAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLCCPWPLQLGGSWKPSTQEAPL*DTPRAG Trigger: CCCTGCTCTTGGTGTGTCCCACAGAGGGGCTTCCTG...CGTACTGGGCTTCCAAGAGCCACCAAGCTGGAGGGGCCAGGGACAACATAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS-3UTR GCA 90 bp | TTGTCCCTGGCCCCTCCAGCTTGGTGGCTCTTGGAAGCCCAGTACGAGTCACACGCAACAGCCTGGGAGTaGCCACATAAGAACAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLAPPAWWLLEAQYESHATAWE*PHKNRR Trigger: CCTCCTGTTCTTATGTGGGCACTCCCAGGCTGTTGC...GTGTGACTCGTACTGGGCTTCCAAGAGCCACCAAGCTGGAGGGGCCAGGGACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| 3UTR CAA 72 bp | TGGAAGCCCAGTACGAGTCACACCCTCAGCCACCCCTaGGCCAAAGTTCCAGGGAATCCTTCAGGTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: WKPSTSHTLSHP*AKVPGNPSGAS Trigger: ACTGGCACCTGAAGGATTCCCTGGAACTTTGGCCAAGGGGTGGCTGAGGGTGTGACTCGTACTGGGCTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS-3UTR TCA 90 bp | CCTCAGCCACCCCTTGGCCAAAGTTCCAGGGAATCCTTCAGGTGCCAGTGGCTATTGTCTACTTGGACCTaGGCCACCAAGATGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PQPPLGQSSRESFRCQWLLSTWT*ATKMVE Trigger: CTCCACCATCTTGGTGGCTCAGGTCCAAGTAGACAA...TAGCCACTGGCACCTGAAGGATTCCCTGGAACTTTGGCCAAGGGGTGGCTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS-3UTR TCA 90 bp | TGGCCAAAGTTCCAGGGAATCCTTCAGGTGCCAGTGGCTAGAGACACAGGACTGCCCCTTGGCCTGCTGTaGACAACAGCACCAGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: WPKFQGILQVPVARDTGLPLGLL*TTAPVS Trigger: GGATACTGGTGCTGTTGTTCACAGCAGGCCAAGGGG...CAGTCCTGTGTCTCTAGCCACTGGCACCTGAAGGATTCCCTGGAACTTTGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS-3UTR TCA 90 bp | ACCCTCAGCCACCCCTTGGCCAAAGTTCCAGGGAATCCTTCAGGTGCCAGTGGCCTTGAAATGAGGAACTaGGGGTTCTCTGTCCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TLSHPLAKVPGNPSGASGLEMRN*GFSVPR Trigger: TCTCGGGACAGAGAACCCTCAGTTCCTCATTTCAAG...GCCACTGGCACCTGAAGGATTCCCTGGAACTTTGGCCAAGGGGTGGCTGAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS-3UTR CCA 90 bp | CACAGAACGATGTTACTGCTTCCTTATGTTGTCCCTGGCCCCTCCAGCTTGGTGCAGAGTCCAGACGCCTaGCAGGGACCACAGAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: HRTMLLLPYVVPGPSSLVQSPDA*QGPQST Trigger: TGTGCTCTGTGGTCCCTGCCAGGCGTCTGGACTCTG...CACCAAGCTGGAGGGGCCAGGGACAACATAAGGAAGCAGTAACATCGTTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS-3UTR TCA 90 bp | ATGTTGTCCCTGGCCCCTCCAGCTTGGTGGCTCTTGGAAGCCCAGTACGAGTCACCTGGACTTCAGGCTTaGAATGAGGAACTGAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: MLSLAPPAWWLLEAQYESPGLQA*NEELRV Trigger: AACCCTCAGTTCCTCATTTCAAGCCTGAAGTCCAGG...TGACTCGTACTGGGCTTCCAAGAGCCACCAAGCTGGAGGGGCCAGGGACAACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS-3UTR TCA 90 bp | TCACACCCTCAGCCACCCCTTGGCCAAAGTTCCAGGGAATCCTTCAGGTGCCAGACTTCAGGCTTGAAATaGGGAACTGAGGGTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHPQPPLGQSSRESFRCQTSGLK*GTEGSL Trigger: CAGAGAACCCTCAGTTCCTCATTTCAAGCCTGAAGT...CTGGCACCTGAAGGATTCCCTGGAACTTTGGCCAAGGGGTGGCTGAGGGTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS-3UTR TCA 90 bp | CACAGAACGATGTTACTGCTTCCTTATGTTGTCCCTGGCCCCTCCAGCTTGGTGGGGTTTCCGAAGGTCTaGGACTGGCTTGTCTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: HRTMLLLPYVVPGPSSLVGFPKV*DWLVYL Trigger: CAAGTAGACAAGCCAGTCTCAGACCTTCGGAAACCC...CACCAAGCTGGAGGGGCCAGGGACAACATAAGGAAGCAGTAACATCGTTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS-3UTR CCA 90 bp | CAGTGGCTAGAGACACAGGACTGTGGGTCAGGCTTTTCCACGCAGATATCTCCACTGTCTGCAACAGCCTaGGAGTGCCCACATAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QWLETQDCGSGFSTQISPLSATA*ECPHKN Trigger: GTTCTTATGTGGGCACTCCCAGGCTGTTGCAGACAG...TGGAGATATCTGCGTGGAAAAGCCTGACCCACAGTCCTGTGTCTCTAGCCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS-3UTR CCA 90 bp | ATGTTACTGCTTCCTTATGTTGTCCCTGGCCCCTCCAGCTTGGTGGCTCTTGGAAACCAGGTTAAAAGCTaGCCCCCAAGTAGGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: MLLLPYVVPGPSSLVALGNQVKS*PPSREG Trigger: TCCCTCCCTACTTGGGGGCCAGCTTTTAACCTGGTT...TCCAAGAGCCACCAAGCTGGAGGGGCCAGGGACAACATAAGGAAGCAGTAACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| 3UTR CAA 72 bp | GGTGACATCACAGAACGATGTTACTGCTTCCTTATGTaGTCCCTGGCCCCTCCAGCTTGGTGGCTCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GDITERCYCFLM*SLAPPAWWLLE Trigger: TTCCAAGAGCCACCAAGCTGGAGGGGCCAGGGACAACATAAGGAAGCAGTAACATCGTTCTGTGATGTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS-3UTR GCA 90 bp | ACATCACAGAACGATGTTACTGCTTCCTTATGTTGTCCCTGGCCCCTCCAGCTTCGTAGATGGTCTGGATaGTGTCTGCAACAGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSQNDVTASLCCPWPLQLRRWSG*CLQQPG Trigger: CCCAGGCTGTTGCAGACAGCATCCAGACCATCTACG...AAGCTGGAGGGGCCAGGGACAACATAAGGAAGCAGTAACATCGTTCTGTGATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS CCA 90 bp | TCACGGTATTCCTTCCCTCTAGCCAGGTCACAGAGTCCAGACGCCTaGCAGGGACCACAGAGCACAGGAGGGCAGCGCAAGAGGGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SRYSFPLARSQSPDA*QGPQSTGGQRKRGH Trigger: ATGGCCCCTCTTGCGCTGCCCTCCTGTGCTCTGTGGTCCCTGCCAGGCGTCTGGACTCTGTGACCTGGCTAGAGGGAAGGAATACCGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS CCA 90 bp | CGCCGCCTCCAGAGCACTATGCTGAGGGCTATGATGGTGACCCCTTaGCCTGCTGTGAACAACAGCACCAGTATCCAGGGCACGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RRLQSTMLRAMMVTP*PAVNNSTSIQGTSQ Trigger: CTGGGACGTGCCCTGGATACTGGTGCTGTTGTTCACAGCAGGCCAAGGGGTCACCATCATAGCCCTCAGCATAGTGCTCTGGAGGCGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS GCA 90 bp | CCTCCAGAGCACTATGCTGAGGGCTATGATGGTGACCCCTTGGCCTaGTGTGAACAACAGCACCAGTATCCAGGGCACGTCCCAGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PPEHYAEGYDGDPLA*CEQQHQYPGHVPAR Trigger: CCGAGCTGGGACGTGCCCTGGATACTGGTGCTGTTGTTCACAGCAGGCCAAGGGGTCACCATCATAGCCCTCAGCATAGTGCTCTGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS CCA 90 bp | TGTTCTGAGGCAAAAGGCAGCGGATATTCCTTGGCCTACGGGCCCTaGTCTCAGGAAGCCCCTCTGTGGGACACACCAAGAGCAGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CSEAKGSGYSLAYGP*SQEAPLWDTPRAGQ Trigger: CTGCCCTGCTCTTGGTGTGTCCCACAGAGGGGCTTCCTGAGACCAGGGCCCGTAGGCCAAGGAATATCCGCTGCCTTTTGCCTCAGAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS TCA 90 bp | GGTTCGGGTTTCCGAAGGTCTGAGACTGGCTTGTCTACTTGGACCTaGGCCACCAAGATGGTGGAGGAGCCTGCTACAGGGCTGCGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GSGFRRSETGLSTWT*ATKMVEEPATGLRN Trigger: GTTCCGCAGCCCTGTAGCAGGCTCCTCCACCATCTTGGTGGCTCAGGTCCAAGTAGACAAGCCAGTCTCAGACCTTCGGAAACCCGAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS TCA 90 bp | GTGGATGTTCTCATAGACCTGGACTTCAGGCTTGAAATGAGGAACTaGGGGTTCTCTGTCCCGAGACCCCTGGGCCCTCCGCCGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VDVLIDLDFRLEMRN*GFSVPRPLGPPPPP Trigger: TGGAGGCGGCGGAGGGCCCAGGGGTCTCGGGACAGAGAACCCTCAGTTCCTCATTTCAAGCCTGAAGTCCAGGTCTATGAGAACATCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS CCA 90 bp | GGCAGGGACCACAGAGCACAGGAGGGCAGCGCAAGAGGGGCCATCTaGAGACTTCACAGAGAACTGGGATCCTTTAAGCACAGAGACGTC | + |
|
Preference number: 5 (lower is better) Translates to: GRDHRAQEGSARGAI*RLHRELGSFKHRDV Trigger: GACGTCTCTGTGCTTAAAGGATCCCAGTTCTCTGTGAAGTCTCCAGATGGCCCCTCTTGCGCTGCCCTCCTGTGCTCTGTGGTCCCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS-3UTR CAA 90 bp | CTCCAGCTTGGTGGCTCTTGGAAGCCCAGTACGAGTCACACCCTCAGCCACCCCTATGATGGTGACCCCTaGGCCTGCTGTGAACAACAG | + |
|
Preference number: 5 (lower is better) Translates to: LQLGGSWKPSTSHTLSHPYDGDP*ACCEQQ Trigger: CTGTTGTTCACAGCAGGCCAAGGGGTCACCATCATA...GGGGTGGCTGAGGGTGTGACTCGTACTGGGCTTCCAAGAGCCACCAAGCTGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS TCA 90 bp | GTGGGACACACCAAGAGCAGGGCAGCCCCTTCTCCCCAGAAGTACTaGGCATGTCCTCTCACGGTATTCCTTCCCTCTAGCCAGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: VGHTKSRAAPSPQKY*ACPLTVFLPSSQVT Trigger: TGTGACCTGGCTAGAGGGAAGGAATACCGTGAGAGGACATGCTCAGTACTTCTGGGGAGAAGGGGCTGCCCTGCTCTTGGTGTGTCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS CCA 90 bp | GGTCTGAGACTGGCTTGTCTACTTGGACCTGAGCCACCAAGATGGTaGAGGAGCCTGCTACAGGGCTGCGGAACCAGGTTAAAAGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GLRLACLLGPEPPRW*RSLLQGCGTRLKAG Trigger: GCCAGCTTTTAACCTGGTTCCGCAGCCCTGTAGCAGGCTCCTCCACCATCTTGGTGGCTCAGGTCCAAGTAGACAAGCCAGTCTCAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS TCA 90 bp | GGTTCCGCGGAAGCTGCTGCCAGGCTAAAGCTGAATCTTTTGTTCTaGGGCAAAAGGCAGCGGATATTCCTTGGCCTACGGGCCCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GSAEAAARLKLNLLF*GKRQRIFLGLRALV Trigger: GACCAGGGCCCGTAGGCCAAGGAATATCCGCTGCCTTTTGCCTCAGAACAAAAGATTCAGCTTTAGCCTGGCAGCAGCTTCCGCGGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS-3UTR CAA 90 bp | GCCACCCCTTGGCCAAAGTTCCAGGGAATCCTTCAGGTGCCAGTGGCTAGAGACGACTGGCTTGTCTACTaGGACCTGAGCCACCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: ATPWPKFQGILQVPVARDDWLVY*DLSHQD Trigger: ATCTTGGTGGCTCAGGTCCAAGTAGACAAGCCAGTC...GTCTCTAGCCACTGGCACCTGAAGGATTCCCTGGAACTTTGGCCAAGGGGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS CCA 90 bp | GAAGGTCTGAGACTGGCTTGTCTACTTGGACCTGAGCCACCAAGATaGTGGAGGAGCCTGCTACAGGGCTGCGGAACCAGGTTAAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: EGLRLACLLGPEPPR*WRSLLQGCGTRLKA Trigger: AGCTTTTAACCTGGTTCCGCAGCCCTGTAGCAGGCTCCTCCACCATCTTGGTGGCTCAGGTCCAAGTAGACAAGCCAGTCTCAGACCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS CCA 90 bp | AGGAGGGCAGCGCAAGAGGGGCCATCTGGAGACTTCACAGAGAACTaGGATCCTTTAAGCACAGAGACGTCATACACCCTCCAGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RRAAQEGPSGDFTEN*DPLSTETSYTLQFW Trigger: CCAGAACTGGAGGGTGTATGACGTCTCTGTGCTTAAAGGATCCCAGTTCTCTGTGAAGTCTCCAGATGGCCCCTCTTGCGCTGCCCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS CCA 72 bp | TTGGCCTACGGGCCCTGGTCTCAGGAAGCCCCTCTGTaGGACACACCAAGAGCAGGGCAGCCCCTTCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LAYGPWSQEAPL*DTPRAGQPLLP Trigger: GGGGAGAAGGGGCTGCCCTGCTCTTGGTGTGTCCCACAGAGGGGCTTCCTGAGACCAGGGCCCGTAGGCCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS CAA 90 bp | CCGCCGCCTCCAGAGCACTATGCTGAGGGCTATGATGGTGACCCCTaGGCCTGCTGTGAACAACAGCACCAGTATCCAGGGCACGTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PPPPEHYAEGYDGDP*ACCEQQHQYPGHVP Trigger: TGGGACGTGCCCTGGATACTGGTGCTGTTGTTCACAGCAGGCCAAGGGGTCACCATCATAGCCCTCAGCATAGTGCTCTGGAGGCGGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS CCA 72 bp | AGACTGGCTTGTCTACTTGGACCTGAGCCACCAAGATaGTGGAGGAGCCTGCTACAGGGCTGCGGAACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RLACLLGPEPPR*WRSLLQGCGTR Trigger: CCTGGTTCCGCAGCCCTGTAGCAGGCTCCTCCACCATCTTGGTGGCTCAGGTCCAAGTAGACAAGCCAGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS CCA 72 bp | GCAAAAGGCAGCGGATATTCCTTGGCCTACGGGCCCTaGTCTCAGGAAGCCCCTCTGTGGGACACACCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: AKGSGYSLAYGP*SQEAPLWDTPR Trigger: TCTTGGTGTGTCCCACAGAGGGGCTTCCTGAGACCAGGGCCCGTAGGCCAAGGAATATCCGCTGCCTTTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS TCA 72 bp | CTCATAGACCTGGACTTCAGGCTTGAAATGAGGAACTaGGGGTTCTCTGTCCCGAGACCCCTGGGCCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: LIDLDFRLEMRN*GFSVPRPLGPP Trigger: CGGAGGGCCCAGGGGTCTCGGGACAGAGAACCCTCAGTTCCTCATTTCAAGCCTGAAGTCCAGGTCTATGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS TCA 72 bp | ACCAAGAGCAGGGCAGCCCCTTCTCCCCAGAAGTACTaGGCATGTCCTCTCACGGTATTCCTTCCCTCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: TKSRAAPSPQKY*ACPLTVFLPSS Trigger: GCTAGAGGGAAGGAATACCGTGAGAGGACATGCTCAGTACTTCTGGGGAGAAGGGGCTGCCCTGCTCTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS GCA 72 bp | CACTATGCTGAGGGCTATGATGGTGACCCCTTGGCCTaGTGTGAACAACAGCACCAGTATCCAGGGCACGTC | + |
|
Preference number: 6 (lower is better) Translates to: HYAEGYDGDPLA*CEQQHQYPGHV Trigger: GACGTGCCCTGGATACTGGTGCTGTTGTTCACAGCAGGCCAAGGGGTCACCATCATAGCCCTCAGCATAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS CCA 72 bp | CACAGAGCACAGGAGGGCAGCGCAAGAGGGGCCATCTaGAGACTTCACAGAGAACTGGGATCCTTTAAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: HRAQEGSARGAI*RLHRELGSFKH Trigger: GTGCTTAAAGGATCCCAGTTCTCTGTGAAGTCTCCAGATGGCCCCTCTTGCGCTGCCCTCCTGTGCTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS CCA 72 bp | CAGAGCACTATGCTGAGGGCTATGATGGTGACCCCTTaGCCTGCTGTGAACAACAGCACCAGTATCCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: QSTMLRAMMVTP*PAVNNSTSIQG Trigger: GCCCTGGATACTGGTGCTGTTGTTCACAGCAGGCCAAGGGGTCACCATCATAGCCCTCAGCATAGTGCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS GCA 72 bp | GGCACAAACAGTAGGGGAGGGTTCCGCGGAAGCTGCTaGCAGGCTAAAGCTGAATCTTTTGTTCTGAGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: GTNSRGGFRGSC*QAKAESFVLRQ Trigger: TTGCCTCAGAACAAAAGATTCAGCTTTAGCCTGGCAGCAGCTTCCGCGGAACCCTCCCCTACTGTTTGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS CCA 72 bp | GCGCAAGAGGGGCCATCTGGAGACTTCACAGAGAACTaGGATCCTTTAAGCACAGAGACGTCATACACCCTC | + |
|
Preference number: 6 (lower is better) Translates to: AQEGPSGDFTEN*DPLSTETSYTL Trigger: GAGGGTGTATGACGTCTCTGTGCTTAAAGGATCCCAGTTCTCTGTGAAGTCTCCAGATGGCCCCTCTTGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS TCA 72 bp | TTTGTACCTGGAATCGGGTTCGGGTTTCCGAAGGTCTaGGACTGGCTTGTCTACTTGGACCTGAGCCACCAA | + |
|
Preference number: 6 (lower is better) Translates to: FVPGIGFGFPKV*DWLVYLDLSHQ Trigger: TTGGTGGCTCAGGTCCAAGTAGACAAGCCAGTCTCAGACCTTCGGAAACCCGAACCCGATTCCAGGTACAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||
| CDS TCA 72 bp | CCAAGTGGATGTTCTCATAGACCTGGACTTCAGGCTTaGAATGAGGAACTGAGGGTTCTCTGTCCCGAGACC | + |
|
Preference number: 6 (lower is better) Translates to: PSGCSHRPGLQA*NEELRVLCPET Trigger: GGTCTCGGGACAGAGAACCCTCAGTTCCTCATTTCAAGCCTGAAGTCCAGGTCTATGAGAACATCCACTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038507.7 |
||