Pregenerated sensors for LY6G5C (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034482

Ensembl transcript IDs: ENSMUST00000037849.3

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	AAGGTCTTCATGACCAGCACTGTTAAGAGGACAGCACACAAGGCTTaGGGGACGCCATGGAGTCCCAGGGGCCTCAGGGACCAGCTGGCT	+
Preference number: 5 (lower is better) Translates to: KVFMTSTVKRTAHKA*GTPWSPRGLRDQLA Trigger: AGCCAGCTGGTCCCTGAGGCCCCTGGGACTCCATGGCGTCCCCCAAGCCTTGTGTGCTGTCCTCTTAACAGTGCTGGTCATGAAGACCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037849.3
CDS TCA 90 bp	GGTGAAGGTCCTCGAGCTTGGTATCACCGAGAACCAAGGTCTTCATaGCCAGCACTGTTAAGAGGACAGCACACAAGGCTTGGGGGACGC	+
Preference number: 5 (lower is better) Translates to: GEGPRAWYHREPRSS*PALLRGQHTRLGGR Trigger: GCGTCCCCCAAGCCTTGTGTGCTGTCCTCTTAACAGTGCTGGTCATGAAGACCTTGGTTCTCGGTGATACCAAGCTCGAGGACCTTCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037849.3
CDS TCA 72 bp	CCTCGAGCTTGGTATCACCGAGAACCAAGGTCTTCATaGCCAGCACTGTTAAGAGGACAGCACACAAGGCTT	+
Preference number: 6 (lower is better) Translates to: PRAWYHREPRSS*PALLRGQHTRL Trigger: AAGCCTTGTGTGCTGTCCTCTTAACAGTGCTGGTCATGAAGACCTTGGTTCTCGGTGATACCAAGCTCGAGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037849.3
CDS TCA 72 bp	TATCCAAAAGCCAAACACCGGGGAAGCACGGGTATATaGACAATGGACCATCTGCTCCTTGCTGTAGCAGTC	+
Preference number: 6 (lower is better) Translates to: YPKAKHRGSTGI*TMDHLLLAVAV Trigger: GACTGCTACAGCAAGGAGCAGATGGTCCATTGTTCATATACCCGTGCTTCCCCGGTGTTTGGCTTTTGGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037849.3

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