Pregenerated sensors for LY6G2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047728Ensembl transcript IDs: ENSMUST00000055719.8, ENSMUST00000185307.7, ENSMUST00000229521.2
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTAGCACAGGCAGGGGTCAGGGACAGCTGTCCTGCCTATGGCAGCTaGCAAGAGGCAGGATCAGCTTTCCTGTGCTCATGCCATTGGGGC | + |
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Preference number: 1 (lower is better) Translates to: LAQAGVRDSCPAYGS*QEAGSAFLCSCHWG Trigger: GCCCCAATGGCATGAGCACAGGAAAGCTGATCCTGCCTCTTGCCAGCTGCCATAGGCAGGACAGCTGTCCCTGACCCCTGCCTGTGCTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR TCA 90 bp | GCTTTCCTGTGCTCATGCCATTGGGGCCAGCTCTCCTGCATGGCCTaGGTGCCTCAGCCAGTGAGGTCAGGTGCAGTCTGCCCTTTTAAA | + |
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Preference number: 1 (lower is better) Translates to: AFLCSCHWGQLSCMA*VPQPVRSGAVCPFK Trigger: TTTAAAAGGGCAGACTGCACCTGACCTCACTGGCTGAGGCACTCAGGCCATGCAGGAGAGCTGGCCCCAATGGCATGAGCACAGGAAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR CCA 90 bp | GGATCTGCAGGACCAGCATCTTCATGTTTACCAGCAGTTCATAGATaGAGTAGATGTTGGGCTGGGCCAACCCTAAGGCTTGGATCTGGC | + |
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Preference number: 1 (lower is better) Translates to: GSAGPASSCLPAVHR*SRCWAGPTLRLGSG Trigger: GCCAGATCCAAGCCTTAGGGTTGGCCCAGCCCAACATCTACTCCATCTATGAACTGCTGGTAAACATGAAGATGCTGGTCCTGCAGATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR CCA 90 bp | AGTAGTCCTACTCATGTTTCAAGTTTCATGTCCCAACCAGCACCTTaGCCACATTCCTGGATCCTATGCTTGTCCCAGAGGAGAAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: SSPTHVSSFMSQPAP*PHSWILCLSQRRRL Trigger: CAGCCTTCTCCTCTGGGACAAGCATAGGATCCAGGAATGTGGCCAAGGTGCTGGTTGGGACATGAAACTTGAAACATGAGTAGGACTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055719.8 ENSMUST00000185307.7 ENSMUST00000229521.2 |
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| 3UTR CCA 90 bp | TGGGTTTGTCCCAGAATCCCTCTCTGTTGTTGTTACCCTGTGTCATaGAGATCCTGTATTTTTGGATCTGCAGGACCAGCATCTTCATGT | + |
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Preference number: 1 (lower is better) Translates to: WVCPRIPLCCCYPVS*RSCIFGSAGPASSC Trigger: ACATGAAGATGCTGGTCCTGCAGATCCAAAAATACAGGATCTCCATGACACAGGGTAACAACAACAGAGAGGGATTCTGGGACAAACCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR CCA 90 bp | ATTGCTCTGGTTAGAGGCTTCTGGCTTCTGCTACACTATCAATACTaGGTTTGTCCCAGAATCCCTCTCTGTTGTTGTTACCCTGTGTCA | + |
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Preference number: 1 (lower is better) Translates to: IALVRGFWLLLHYQY*VCPRIPLCCCYPVS Trigger: TGACACAGGGTAACAACAACAGAGAGGGATTCTGGGACAAACCCAGTATTGATAGTGTAGCAGAAGCCAGAAGCCTCTAACCAGAGCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR GCA 90 bp | TTATCATTAAATGAGTCATTGCTCTGGTTAGAGGCTTCTGGCTTCTaGTACACTATCAATACTGGGTTTGTCCCAGAATCCCTCTCTGTT | + |
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Preference number: 1 (lower is better) Translates to: LSLNESLLWLEASGF*YTINTGFVPESLSV Trigger: AACAGAGAGGGATTCTGGGACAAACCCAGTATTGATAGTGTAGCAGAAGCCAGAAGCCTCTAACCAGAGCAATGACTCATTTAATGATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGGTTAGAGGCTTCTGGCTTCTGCTACACTATCAATACTGGGTTTGTCCCCTGTGCTCATGCCATTaGGGCCAGCTCTCCTGCATG | + |
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Preference number: 2 (lower is better) Translates to: ALVRGFWLLLHYQYWVCPLCSCH*GQLSCM Trigger: CATGCAGGAGAGCTGGCCCCAATGGCATGAGCACAG...GGGACAAACCCAGTATTGATAGTGTAGCAGAAGCCAGAAGCCTCTAACCAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGTAATTGAGTTGGTCATCCCACCAGCTCTCCTGCACCCAAACTTCCAAGAGGCAAAACCCAGCACTTaGAAGCAGAGGCCAGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: VVIELVIPPALLHPNFQEAKPST*KQRPEE Trigger: CTCTTCTGGCCTCTGCTTTCAAGTGCTGGGTTTTGC...CTCTTGGAAGTTTGGGTGCAGGAGAGCTGGTGGGATGACCAACTCAATTACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGTAATTGAGTTGGTCATCCCACCAGCTCTCCTGCACCCAAACTTCCAAGAGAGGTCAGGTGCAGTCTaGCCTTTTAAAGCACAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: VVIELVIPPALLHPNFQERSGAV*PFKAQG Trigger: TCCTTGTGCTTTAAAAGGGCAGACTGCACCTGACCT...CTCTTGGAAGTTTGGGTGCAGGAGAGCTGGTGGGATGACCAACTCAATTACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR-3UTR GCA 90 bp | TCATTGCTCTGGTTAGAGGCTTCTGGCTTCTGCTACACTATCAATACTGGGTTTCAGGGACAGCTGTCCTaGCTATGGCAGCTGGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: SLLWLEASGFCYTINTGFQGQLS*LWQLAR Trigger: TCTTGCCAGCTGCCATAGGCAGGACAGCTGTCCCTG...AAACCCAGTATTGATAGTGTAGCAGAAGCCAGAAGCCTCTAACCAGAGCAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCACAGATTATCATTAAATGAGTCATTGCTCTGGTTAGAGGCTTCTGGCTTCGCCAGCTCTCCTGCATaGCCTGAGTGCCTCAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: THRLSLNESLLWLEASGFASSPA*PECLSQ Trigger: CTGGCTGAGGCACTCAGGCCATGCAGGAGAGCTGGC...GAAGCCAGAAGCCTCTAACCAGAGCAATGACTCATTTAATGATAATCTGTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTGGTTAGAGGCTTCTGGCTTCTGCTACACTATCAATACTGGGTTTGTCCCAAGATGGAGTAGATGTTaGGCTGGGCCAACCCTAAGG | + |
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Preference number: 2 (lower is better) Translates to: LWLEASGFCYTINTGFVPRWSRC*AGPTLR Trigger: CCTTAGGGTTGGCCCAGCCCAACATCTACTCCATCT...TGGGACAAACCCAGTATTGATAGTGTAGCAGAAGCCAGAAGCCTCTAACCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCACAGATTATCATTAAATGAGTCATTGCTCTGGTTAGAGGCTTCTGGCTTCCAAGAGCAGCTCTCCTaGTTAGCACAGGCAGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: THRLSLNESLLWLEASGFQEQLS*LAQAGV Trigger: GACCCCTGCCTGTGCTAAGCAGGAGAGCTGCTCTTG...GAAGCCAGAAGCCTCTAACCAGAGCAATGACTCATTTAATGATAATCTGTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCTGCTACACTATCAATACTGGGTTTGTCCCAGAATCCCTCTCTGTTGTTGTGCTTGGATCTGGCCATaGGTGGTAATTGAGTTGGTC | + |
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Preference number: 2 (lower is better) Translates to: LLLHYQYWVCPRIPLCCCAWIWP*VVIELV Trigger: GACCAACTCAATTACCACCCATGGCCAGATCCAAGC...ACAACAACAGAGAGGGATTCTGGGACAAACCCAGTATTGATAGTGTAGCAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR CAA 90 bp | GCTACACTATCAATACTGGGTTTGTCCCAGAATCCCTCTCTGTTGTaGTTACCCTGTGTCATGGAGATCCTGTATTTTTGGATCTGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: ATLSILGLSQNPSLL*LPCVMEILYFWICR Trigger: CCTGCAGATCCAAAAATACAGGATCTCCATGACACAGGGTAACAACAACAGAGAGGGATTCTGGGACAAACCCAGTATTGATAGTGTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR-3UTR GCA 90 bp | AGAATCCCTCTCTGTTGTTGTTACCCTGTGTCATGGAGATCCTGTATTTTTGGAAGGTCAGGTGCAGTCTaGCCTTTTAAAGCACAAGGA | + |
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Preference number: 2 (lower is better) Translates to: RIPLCCCYPVSWRSCIFGRSGAV*PFKAQG Trigger: TCCTTGTGCTTTAAAAGGGCAGACTGCACCTGACCT...TCCAAAAATACAGGATCTCCATGACACAGGGTAACAACAACAGAGAGGGATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR GCA 72 bp | CTGCTTAGCACAGGCAGGGGTCAGGGACAGCTGTCCTaGCTATGGCAGCTGGCAAGAGGCAGGATCAGCTTT | + |
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Preference number: 3 (lower is better) Translates to: LLSTGRGQGQLS*LWQLARGRISF Trigger: AAAGCTGATCCTGCCTCTTGCCAGCTGCCATAGGCAGGACAGCTGTCCCTGACCCCTGCCTGTGCTAAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR GCA 72 bp | GCTCTCCTGCACCCAAACTTCCAAGAGCAGCTCTCCTaGTTAGCACAGGCAGGGGTCAGGGACAGCTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: ALLHPNFQEQLS*LAQAGVRDSCP Trigger: AGGACAGCTGTCCCTGACCCCTGCCTGTGCTAAGCAGGAGAGCTGCTCTTGGAAGTTTGGGTGCAGGAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR TCA 72 bp | GCCAGCTCTCCTGCATGGCCTGAGTGCCTCAGCCAGTaGGGTCAGGTGCAGTCTGCCCTTTTAAAGCACAAG | + |
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Preference number: 3 (lower is better) Translates to: ASSPAWPECLSQ*GQVQSALLKHK Trigger: CTTGTGCTTTAAAAGGGCAGACTGCACCTGACCTCACTGGCTGAGGCACTCAGGCCATGCAGGAGAGCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR CCA 72 bp | TTGGGCTGGGCCAACCCTAAGGCTTGGATCTGGCCATaGGTGGTAATTGAGTTGGTCATCCCACCAGCTCTC | + |
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Preference number: 3 (lower is better) Translates to: LGWANPKAWIWP*VVIELVIPPAL Trigger: GAGAGCTGGTGGGATGACCAACTCAATTACCACCCATGGCCAGATCCAAGCCTTAGGGTTGGCCCAGCCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR-3UTR CAA 90 bp | GACAGCTGTCCTGCCTATGGCAGCTGGCAAGAGGCAGGATCAGCTTTCCTGTGCTGCAAAACCCAGCACTaGAAAGCAGAGGCCAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: DSCPAYGSWQEAGSAFLCCKTQH*KAEARR Trigger: TCTTCTGGCCTCTGCTTTCAAGTGCTGGGTTTTGCA...GCACAGGAAAGCTGATCCTGCCTCTTGCCAGCTGCCATAGGCAGGACAGCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR-3UTR CAA 90 bp | GCTCTGGTTAGAGGCTTCTGGCTTCTGCTACACTATCAATACTGGGTTTGTCCCCCTGTGCTCATGCCATaGGGGCCAGCTCTCCTGCAT | + |
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Preference number: 3 (lower is better) Translates to: ALVRGFWLLLHYQYWVCPPVLMP*GPALLH Trigger: ATGCAGGAGAGCTGGCCCCAATGGCATGAGCACAGG...GGGACAAACCCAGTATTGATAGTGTAGCAGAAGCCAGAAGCCTCTAACCAGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR CCA 72 bp | AGTTTCATGTCCCAACCAGCACCTTGGCCACATTCCTaGATCCTATGCTTGTCCCAGAGGAGAAGGCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: SFMSQPAPWPHS*ILCLSQRRRLQ Trigger: CTGCAGCCTTCTCCTCTGGGACAAGCATAGGATCCAGGAATGTGGCCAAGGTGCTGGTTGGGACATGAAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055719.8 ENSMUST00000185307.7 ENSMUST00000229521.2 |
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| 3UTR-3UTR CAA 90 bp | CTCTGGTTAGAGGCTTCTGGCTTCTGCTACACTATCAATACTGGGTTTGTCCCACCTGTGCTCATGCCATaGGGGCCAGCTCTCCTGCAT | + |
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Preference number: 3 (lower is better) Translates to: LWLEASGFCYTINTGFVPPVLMP*GPALLH Trigger: ATGCAGGAGAGCTGGCCCCAATGGCATGAGCACAGG...TGGGACAAACCCAGTATTGATAGTGTAGCAGAAGCCAGAAGCCTCTAACCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR-3UTR CAA 90 bp | GGAATAGCCAGTGTGGTAATGAGTACATACCTGCAAAACCCAGCACTTGAAAGCGTCCCAACCAGCACCTaGGCCACATTCCTGGATCCT | + |
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Preference number: 3 (lower is better) Translates to: GIASVVMSTYLQNPALESVPTST*ATFLDP Trigger: AGGATCCAGGAATGTGGCCAAGGTGCTGGTTGGGAC...GCTTTCAAGTGCTGGGTTTTGCAGGTATGTACTCATTACCACACTGGCTATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR CCA 72 bp | ACTCATGTTTCAAGTTTCATGTCCCAACCAGCACCTTaGCCACATTCCTGGATCCTATGCTTGTCCCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: THVSSFMSQPAP*PHSWILCLSQR Trigger: CCTCTGGGACAAGCATAGGATCCAGGAATGTGGCCAAGGTGCTGGTTGGGACATGAAACTTGAAACATGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055719.8 ENSMUST00000185307.7 ENSMUST00000229521.2 |
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| 3UTR CCA 72 bp | TCATGTTTACCAGCAGTTCATAGATGGAGTAGATGTTaGGCTGGGCCAACCCTAAGGCTTGGATCTGGCCAT | + |
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Preference number: 3 (lower is better) Translates to: SCLPAVHRWSRC*AGPTLRLGSGH Trigger: ATGGCCAGATCCAAGCCTTAGGGTTGGCCCAGCCCAACATCTACTCCATCTATGAACTGCTGGTAAACATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR CCA 72 bp | GGACCAGCATCTTCATGTTTACCAGCAGTTCATAGATaGAGTAGATGTTGGGCTGGGCCAACCCTAAGGCTT | + |
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Preference number: 3 (lower is better) Translates to: GPASSCLPAVHR*SRCWAGPTLRL Trigger: AAGCCTTAGGGTTGGCCCAGCCCAACATCTACTCCATCTATGAACTGCTGGTAAACATGAAGATGCTGGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR-3UTR CAA 90 bp | TGGCTTCTGCTACACTATCAATACTGGGTTTGTCCCAGAATCCCTCTCTGTTGTTGGGTGGTAATTGAGTaGGTCATCCCACCAGCTCTC | + |
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Preference number: 3 (lower is better) Translates to: WLLLHYQYWVCPRIPLCCWVVIE*VIPPAL Trigger: GAGAGCTGGTGGGATGACCAACTCAATTACCACCCA...ACAACAGAGAGGGATTCTGGGACAAACCCAGTATTGATAGTGTAGCAGAAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR CCA 72 bp | CCCAGAATCCCTCTCTGTTGTTGTTACCCTGTGTCATaGAGATCCTGTATTTTTGGATCTGCAGGACCAGCA | + |
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Preference number: 3 (lower is better) Translates to: PRIPLCCCYPVS*RSCIFGSAGPA Trigger: TGCTGGTCCTGCAGATCCAAAAATACAGGATCTCCATGACACAGGGTAACAACAACAGAGAGGGATTCTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR-3UTR CAA 90 bp | AGAATCCCTCTCTGTTGTTGTTACCCTGTGTCATGGAGATCCTGTATTTTTGGATGCAAAACCCAGCACTaGAAAGCAGAGGCCAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: RIPLCCCYPVSWRSCIFGCKTQH*KAEARR Trigger: TCTTCTGGCCTCTGCTTTCAAGTGCTGGGTTTTGCA...TCCAAAAATACAGGATCTCCATGACACAGGGTAACAACAACAGAGAGGGATTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR GCA 72 bp | TTACCCTGTGTCATGGAGATCCTGTATTTTTGGATCTaGAGGACCAGCATCTTCATGTTTACCAGCAGTTCA | + |
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Preference number: 3 (lower is better) Translates to: LPCVMEILYFWI*RTSIFMFTSSS Trigger: TGAACTGCTGGTAAACATGAAGATGCTGGTCCTGCAGATCCAAAAATACAGGATCTCCATGACACAGGGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR CCA 72 bp | TTGTTGTTACCCTGTGTCATGGAGATCCTGTATTTTTaGATCTGCAGGACCAGCATCTTCATGTTTACCAGC | + |
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Preference number: 3 (lower is better) Translates to: LLLPCVMEILYF*ICRTSIFMFTS Trigger: GCTGGTAAACATGAAGATGCTGGTCCTGCAGATCCAAAAATACAGGATCTCCATGACACAGGGTAACAACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR-3UTR CAA 90 bp | ACTCACAGATTATCATTAAATGAGTCATTGCTCTGGTTAGAGGCTTCTGGCTTCCTATCAATACTGGGTTaGTCCCAGAATCCCTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: THRLSLNESLLWLEASGFLSILG*SQNPSL Trigger: CAGAGAGGGATTCTGGGACAAACCCAGTATTGATAG...GAAGCCAGAAGCCTCTAACCAGAGCAATGACTCATTTAATGATAATCTGTGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| CDS-3UTR CCA 90 bp | AGGCAGGGGTCAGGGACAGCTGTCCTGCCTATGGCAGCTGGCAAGAGGCAGGATGCAGGAAGTCTCAAGTaGGACCCCCAGGCAACAGTA | + |
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Preference number: 4 (lower is better) Translates to: RQGSGTAVLPMAAGKRQDAGSLK*DPQATV Trigger: TACTGTTGCCTGGGGGTCCCACTTGAGACTTCCTGC...ATCCTGCCTCTTGCCAGCTGCCATAGGCAGGACAGCTGTCCCTGACCCCTGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| CDS-3UTR TCA 90 bp | GCACCTTGGCCACATTCCTGGATCCTATGCTTGTCCCAGAGGAGAAGGCTGCAGAGGTGCTGCCTTCAGTaGGAACTGCTGCATTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: APWPHSWILCLSQRRRLQRCCLQ*ELLHCR Trigger: TCTGCAATGCAGCAGTTCTCACTGAAGGCAGCACCT...CTGCAGCCTTCTCCTCTGGGACAAGCATAGGATCCAGGAATGTGGCCAAGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055719.8 ENSMUST00000185307.7 ENSMUST00000229521.2 |
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| 3UTR CAA 72 bp | CCTAAGGCTTGGATCTGGCCATGGGTGGTAATTGAGTaGGTCATCCCACCAGCTCTCCTGCACCCAAACTTC | + |
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Preference number: 4 (lower is better) Translates to: PKAWIWPWVVIE*VIPPALLHPNF Trigger: GAAGTTTGGGTGCAGGAGAGCTGGTGGGATGACCAACTCAATTACCACCCATGGCCAGATCCAAGCCTTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| CDS-3UTR GCA 90 bp | CAGCACCTTGGCCACATTCCTGGATCCTATGCTTGTCCCAGAGGAGAAGGCTGCGGCAGGTCATTGTTTTaGAGGAAGTCTCAAGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: QHLGHIPGSYACPRGEGCGRSLF*RKSQVG Trigger: TCCCACTTGAGACTTCCTGCAAAACAATGACCTGCC...GCAGCCTTCTCCTCTGGGACAAGCATAGGATCCAGGAATGTGGCCAAGGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055719.8 ENSMUST00000185307.7 ENSMUST00000229521.2 |
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| CDS-3UTR TCA 90 bp | CCAGCTCTCCTGCATGGCCTGAGTGCCTCAGCCAGTGAGGTCAGGTGCAGTCTGATAACTTCTTCTTCCTaGGTAACACAGAATCCATCA | + |
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Preference number: 4 (lower is better) Translates to: PALLHGLSASASEVRCSLITSSS*VTQNPS Trigger: TGATGGATTCTGTGTTACTCAGGAAGAAGAAGTTAT...CAGACTGCACCTGACCTCACTGGCTGAGGCACTCAGGCCATGCAGGAGAGCTGG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| CDS-3UTR GCA 90 bp | CCAACCAGCACCTTGGCCACATTCCTGGATCCTATGCTTGTCCCAGAGGAGAAGTGCAGAGGTCTTCCTTaGAACAGAAAGTCTTCACGT | + |
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Preference number: 4 (lower is better) Translates to: PTSTLATFLDPMLVPEEKCRGLP*NRKSSR Trigger: ACGTGAAGACTTTCTGTTGCAAGGAAGACCTCTGCA...CTTCTCCTCTGGGACAAGCATAGGATCCAGGAATGTGGCCAAGGTGCTGGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055719.8 ENSMUST00000185307.7 ENSMUST00000229521.2 |
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| CDS-3UTR GCA 90 bp | AGCACCTTGGCCACATTCCTGGATCCTATGCTTGTCCCAGAGGAGAAGGCTGCATTCAGTGAGAACTGCTaGATTGCAGAGGTCTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: STLATFLDPMLVPEEKAAFSENC*IAEVFL Trigger: AAGGAAGACCTCTGCAATGCAGCAGTTCTCACTGAA...TGCAGCCTTCTCCTCTGGGACAAGCATAGGATCCAGGAATGTGGCCAAGGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055719.8 ENSMUST00000185307.7 ENSMUST00000229521.2 |
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| CDS-3UTR GCA 90 bp | ATCCCACCAGCTCTCCTGCACCCAAACTTCCAAGAGCAGCTCTCCTGCTTAGCATTCAGTGAGAACTGCTaGATTGCAGAGGTCTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: IPPALLHPNFQEQLSCLAFSENC*IAEVFL Trigger: AAGGAAGACCTCTGCAATGCAGCAGTTCTCACTGAA...TGCTAAGCAGGAGAGCTGCTCTTGGAAGTTTGGGTGCAGGAGAGCTGGTGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| CDS-3UTR CCA 90 bp | TGTTTCAAGTTTCATGTCCCAACCAGCACCTTGGCCACATTCCTGGATCCTATGGCAGGAAGTCTCAAGTaGGACCCCCAGGCAACAGTA | + |
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Preference number: 4 (lower is better) Translates to: CFKFHVPTSTLATFLDPMAGSLK*DPQATV Trigger: TACTGTTGCCTGGGGGTCCCACTTGAGACTTCCTGC...CATAGGATCCAGGAATGTGGCCAAGGTGCTGGTTGGGACATGAAACTTGAAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055719.8 ENSMUST00000185307.7 ENSMUST00000229521.2 |
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| CDS-3UTR CCA 90 bp | TTGCTCTGGTTAGAGGCTTCTGGCTTCTGCTACACTATCAATACTGGGTTTGTCGCAGGAAGTCTCAAGTaGGACCCCCAGGCAACAGTA | + |
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Preference number: 4 (lower is better) Translates to: LLWLEASGFCYTINTGFVAGSLK*DPQATV Trigger: TACTGTTGCCTGGGGGTCCCACTTGAGACTTCCTGC...GACAAACCCAGTATTGATAGTGTAGCAGAAGCCAGAAGCCTCTAACCAGAGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR CAA 72 bp | TACTCATGTTTCAAGTTTCATGTCCCAACCAGCACCTaGGCCACATTCCTGGATCCTATGCTTGTCCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: YSCFKFHVPTST*ATFLDPMLVPE Trigger: CTCTGGGACAAGCATAGGATCCAGGAATGTGGCCAAGGTGCTGGTTGGGACATGAAACTTGAAACATGAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055719.8 ENSMUST00000185307.7 ENSMUST00000229521.2 |
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| CDS-3UTR TCA 90 bp | ATGGAGATCCTGTATTTTTGGATCTGCAGGACCAGCATCTTCATGTTTACCAGCAGGTGCTGCCTTCAGTaGGAACTGCTGCATTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: MEILYFWICRTSIFMFTSRCCLQ*ELLHCR Trigger: TCTGCAATGCAGCAGTTCTCACTGAAGGCAGCACCT...GCTGGTAAACATGAAGATGCTGGTCCTGCAGATCCAAAAATACAGGATCTCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR CAA 72 bp | AGGCTTCTGGCTTCTGCTACACTATCAATACTGGGTTaGTCCCAGAATCCCTCTCTGTTGTTGTTACCCTGT | + |
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Preference number: 4 (lower is better) Translates to: RLLASATLSILG*SQNPSLLLLPC Trigger: ACAGGGTAACAACAACAGAGAGGGATTCTGGGACAAACCCAGTATTGATAGTGTAGCAGAAGCCAGAAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| CDS-3UTR TCA 90 bp | GCTCTGGTTAGAGGCTTCTGGCTTCTGCTACACTATCAATACTGGGTTTGTCCCATAACTTCTTCTTCCTaGGTAACACAGAATCCATCA | + |
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Preference number: 4 (lower is better) Translates to: ALVRGFWLLLHYQYWVCPITSSS*VTQNPS Trigger: TGATGGATTCTGTGTTACTCAGGAAGAAGAAGTTAT...GGGACAAACCCAGTATTGATAGTGTAGCAGAAGCCAGAAGCCTCTAACCAGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| CDS-3UTR GCA 90 bp | CTTCTGCTACACTATCAATACTGGGTTTGTCCCAGAATCCCTCTCTGTTGTTGTTGCAGAGGTCTTCCTTaGAACAGAAAGTCTTCACGT | + |
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Preference number: 4 (lower is better) Translates to: LLLHYQYWVCPRIPLCCCCRGLP*NRKSSR Trigger: ACGTGAAGACTTTCTGTTGCAAGGAAGACCTCTGCA...ACAACAACAGAGAGGGATTCTGGGACAAACCCAGTATTGATAGTGTAGCAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| CDS-3UTR GCA 90 bp | ATGGAGATCCTGTATTTTTGGATCTGCAGGACCAGCATCTTCATGTTTACCAGCTTCAGTGAGAACTGCTaGATTGCAGAGGTCTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: MEILYFWICRTSIFMFTSFSENC*IAEVFL Trigger: AAGGAAGACCTCTGCAATGCAGCAGTTCTCACTGAA...GCTGGTAAACATGAAGATGCTGGTCCTGCAGATCCAAAAATACAGGATCTCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR CAA 72 bp | GTTGTTGTTACCCTGTGTCATGGAGATCCTGTATTTTaGGATCTGCAGGACCAGCATCTTCATGTTTACCAG | + |
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Preference number: 4 (lower is better) Translates to: VVVTLCHGDPVF*DLQDQHLHVYQ Trigger: CTGGTAAACATGAAGATGCTGGTCCTGCAGATCCAAAAATACAGGATCTCCATGACACAGGGTAACAACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| 3UTR CAA 72 bp | TCAATACTGGGTTTGTCCCAGAATCCCTCTCTGTTGTaGTTACCCTGTGTCATGGAGATCCTGTATTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: SILGLSQNPSLL*LPCVMEILYFW Trigger: CCAAAAATACAGGATCTCCATGACACAGGGTAACAACAACAGAGAGGGATTCTGGGACAAACCCAGTATTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| CDS-3UTR GCA 90 bp | GAAGAAATATCCAGTAGTCCTACTCATGTTTCAAGTTTCATGTCCCAACCAGCAGGCAGGTCATTGTTTTaGAGGAAGTCTCAAGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: EEISSSPTHVSSFMSQPAGRSLF*RKSQVG Trigger: TCCCACTTGAGACTTCCTGCAAAACAATGACCTGCC...TGCTGGTTGGGACATGAAACTTGAAACATGAGTAGGACTACTGGATATTTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055719.8 ENSMUST00000185307.7 ENSMUST00000229521.2 |
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| CDS-3UTR TCA 90 bp | AGTAGTCCTACTCATGTTTCAAGTTTCATGTCCCAACCAGCACCTTGGCCACATATAACTTCTTCTTCCTaGGTAACACAGAATCCATCA | + |
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Preference number: 4 (lower is better) Translates to: SSPTHVSSFMSQPAPWPHITSSS*VTQNPS Trigger: TGATGGATTCTGTGTTACTCAGGAAGAAGAAGTTAT...ATGTGGCCAAGGTGCTGGTTGGGACATGAAACTTGAAACATGAGTAGGACTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055719.8 ENSMUST00000185307.7 ENSMUST00000229521.2 |
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| CDS-3UTR GCA 90 bp | CCAAATATGGAAGAAATATCCAGTAGTCCTACTCATGTTTCAAGTTTCATGTCCGGCAGGTCATTGTTTTaGAGGAAGTCTCAAGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: PNMEEISSSPTHVSSFMSGRSLF*RKSQVG Trigger: TCCCACTTGAGACTTCCTGCAAAACAATGACCTGCC...GGACATGAAACTTGAAACATGAGTAGGACTACTGGATATTTCTTCCATATTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055719.8 ENSMUST00000185307.7 ENSMUST00000229521.2 |
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| CDS GCA 90 bp | GGACTCCCCTGCCATGGTCCAGGTGCTGCCTTCAGTGAGAACTGCTaGATTGCAGAGGTCTTCCTTGCAACAGAAAGTCTTCACGTTGAC | + |
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Preference number: 5 (lower is better) Translates to: GLPCHGPGAAFSENC*IAEVFLATESLHVD Trigger: GTCAACGTGAAGACTTTCTGTTGCAAGGAAGACCTCTGCAATGCAGCAGTTCTCACTGAAGGCAGCACCTGGACCATGGCAGGGGAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055719.8 |
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| CDS-3UTR CAA 90 bp | CAGCACCTTGGCCACATTCCTGGATCCTATGCTTGTCCCAGAGGAGAAGGCTGCCAGAAAGTCTTCACGTaGACAGCATTACCCAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: QHLGHIPGSYACPRGEGCQKVFT*TALPRN Trigger: GTTCCTGGGTAATGCTGTCAACGTGAAGACTTTCTG...GCAGCCTTCTCCTCTGGGACAAGCATAGGATCCAGGAATGTGGCCAAGGTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055719.8 ENSMUST00000185307.7 ENSMUST00000229521.2 |
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| CDS-3UTR CAA 90 bp | CCAACCAGCACCTTGGCCACATTCCTGGATCCTATGCTTGTCCCAGAGGAGAAGAGTAGGGGCAGGTCATaGTTTTGCAGGAAGTCTCAA | + |
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Preference number: 5 (lower is better) Translates to: PTSTLATFLDPMLVPEEKSRGRS*FCRKSQ Trigger: TTGAGACTTCCTGCAAAACAATGACCTGCCCCTACT...CTTCTCCTCTGGGACAAGCATAGGATCCAGGAATGTGGCCAAGGTGCTGGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055719.8 ENSMUST00000185307.7 ENSMUST00000229521.2 |
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| CDS-3UTR CAA 90 bp | AGCACCTTGGCCACATTCCTGGATCCTATGCTTGTCCCAGAGGAGAAGGCTGCACAGAAAGTCTTCACGTaGACAGCATTACCCAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: STLATFLDPMLVPEEKAAQKVFT*TALPRN Trigger: GTTCCTGGGTAATGCTGTCAACGTGAAGACTTTCTG...TGCAGCCTTCTCCTCTGGGACAAGCATAGGATCCAGGAATGTGGCCAAGGTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055719.8 ENSMUST00000185307.7 ENSMUST00000229521.2 |
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| CDS GCA 90 bp | AATTACCCCTGCCATGGTCCAGGTGCTGCCTTCAGTGAGAACTGCTaGATTGCAGAGGTCTTCCTTGCAACAGAAAGTCTTCACGTTGAC | + |
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Preference number: 5 (lower is better) Translates to: NYPCHGPGAAFSENC*IAEVFLATESLHVD Trigger: GTCAACGTGAAGACTTTCTGTTGCAAGGAAGACCTCTGCAATGCAGCAGTTCTCACTGAAGGCAGCACCTGGACCATGGCAGGGGTAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185307.7 ENSMUST00000229521.2 |
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| CDS-3UTR CAA 90 bp | CAGCACCTTGGCCACATTCCTGGATCCTATGCTTGTCCCAGAGGAGAAGGCTGCATGGGAAGGCAGAGATaGCTCTTTACTTTGATTGTG | + |
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Preference number: 5 (lower is better) Translates to: QHLGHIPGSYACPRGEGCMGRQR*LFTLIV Trigger: CACAATCAAAGTAAAGAGCAATCTCTGCCTTCCCAT...GCAGCCTTCTCCTCTGGGACAAGCATAGGATCCAGGAATGTGGCCAAGGTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055719.8 ENSMUST00000185307.7 ENSMUST00000229521.2 |
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| CDS-3UTR CAA 90 bp | GGAATAGCCAGTGTGGTAATGAGTACATACCTGCAAAACCCAGCACTTGAAAGCAGTAGGGGCAGGTCATaGTTTTGCAGGAAGTCTCAA | + |
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Preference number: 5 (lower is better) Translates to: GIASVVMSTYLQNPALESSRGRS*FCRKSQ Trigger: TTGAGACTTCCTGCAAAACAATGACCTGCCCCTACT...GCTTTCAAGTGCTGGGTTTTGCAGGTATGTACTCATTACCACACTGGCTATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| CDS-3UTR CAA 90 bp | CTTCTGCTACACTATCAATACTGGGTTTGTCCCAGAATCCCTCTCTGTTGTTGTAGTAGGGGCAGGTCATaGTTTTGCAGGAAGTCTCAA | + |
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Preference number: 5 (lower is better) Translates to: LLLHYQYWVCPRIPLCCCSRGRS*FCRKSQ Trigger: TTGAGACTTCCTGCAAAACAATGACCTGCCCCTACT...ACAACAACAGAGAGGGATTCTGGGACAAACCCAGTATTGATAGTGTAGCAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| CDS-3UTR CAA 90 bp | TTGCTCTGGTTAGAGGCTTCTGGCTTCTGCTACACTATCAATACTGGGTTTGTCATGGGAAGGCAGAGATaGCTCTTTACTTTGATTGTG | + |
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Preference number: 5 (lower is better) Translates to: LLWLEASGFCYTINTGFVMGRQR*LFTLIV Trigger: CACAATCAAAGTAAAGAGCAATCTCTGCCTTCCCAT...GACAAACCCAGTATTGATAGTGTAGCAGAAGCCAGAAGCCTCTAACCAGAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055719.8 ENSMUST00000229521.2 |
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| CDS-3UTR CAA 90 bp | CCAAATATGGAAGAAATATCCAGTAGTCCTACTCATGTTTCAAGTTTCATGTCCCAGAAAGTCTTCACGTaGACAGCATTACCCAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: PNMEEISSSPTHVSSFMSQKVFT*TALPRN Trigger: GTTCCTGGGTAATGCTGTCAACGTGAAGACTTTCTG...GGACATGAAACTTGAAACATGAGTAGGACTACTGGATATTTCTTCCATATTTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055719.8 ENSMUST00000185307.7 ENSMUST00000229521.2 |
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| CDS CAA 90 bp | TCCCCTGCCATGGTCCAGGTGCTGCCTTCAGTGAGAACTGCTGCATaGCAGAGGTCTTCCTTGCAACAGAAAGTCTTCACGTTGACAGCA | + |
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Preference number: 6 (lower is better) Translates to: SPAMVQVLPSVRTAA*QRSSLQQKVFTLTA Trigger: TGCTGTCAACGTGAAGACTTTCTGTTGCAAGGAAGACCTCTGCAATGCAGCAGTTCTCACTGAAGGCAGCACCTGGACCATGGCAGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055719.8 |
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| CDS CAA 90 bp | ACCCCTGCCATGGTCCAGGTGCTGCCTTCAGTGAGAACTGCTGCATaGCAGAGGTCTTCCTTGCAACAGAAAGTCTTCACGTTGACAGCA | + |
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Preference number: 6 (lower is better) Translates to: TPAMVQVLPSVRTAA*QRSSLQQKVFTLTA Trigger: TGCTGTCAACGTGAAGACTTTCTGTTGCAAGGAAGACCTCTGCAATGCAGCAGTTCTCACTGAAGGCAGCACCTGGACCATGGCAGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185307.7 ENSMUST00000229521.2 |
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| CDS GCA 72 bp | TGCCATGGTCCAGGTGCTGCCTTCAGTGAGAACTGCTaGATTGCAGAGGTCTTCCTTGCAACAGAAAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: CHGPGAAFSENC*IAEVFLATESL Trigger: AAGACTTTCTGTTGCAAGGAAGACCTCTGCAATGCAGCAGTTCTCACTGAAGGCAGCACCTGGACCATGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055719.8 ENSMUST00000185307.7 ENSMUST00000229521.2 |
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| CDS CAA 72 bp | ATGGTCCAGGTGCTGCCTTCAGTGAGAACTGCTGCATaGCAGAGGTCTTCCTTGCAACAGAAAGTCTTCACG | + |
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Preference number: 6 (lower is better) Translates to: MVQVLPSVRTAA*QRSSLQQKVFT Trigger: CGTGAAGACTTTCTGTTGCAAGGAAGACCTCTGCAATGCAGCAGTTCTCACTGAAGGCAGCACCTGGACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055719.8 ENSMUST00000185307.7 ENSMUST00000229521.2 |
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| CDS CAA 72 bp | CCTTCAGTGAGAACTGCTGCATTGCAGAGGTCTTCCTaGCAACAGAAAGTCTTCACGTTGACAGCATTACCC | + |
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Preference number: 6 (lower is better) Translates to: PSVRTAALQRSS*QQKVFTLTALP Trigger: GGGTAATGCTGTCAACGTGAAGACTTTCTGTTGCAAGGAAGACCTCTGCAATGCAGCAGTTCTCACTGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055719.8 ENSMUST00000185307.7 ENSMUST00000229521.2 |
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| CDS CAA 90 bp | ACTGCTGCATTGCAGAGGTCTTCCTTGCAACAGAAAGTCTTCACGTaGACAGCATTACCCAGGAACTCAGTAGTTTCAGGATTAGTAGGG | + |
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Preference number: 6 (lower is better) Translates to: TAALQRSSLQQKVFT*TALPRNSVVSGLVG Trigger: CCCTACTAATCCTGAAACTACTGAGTTCCTGGGTAATGCTGTCAACGTGAAGACTTTCTGTTGCAAGGAAGACCTCTGCAATGCAGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055719.8 ENSMUST00000185307.7 ENSMUST00000229521.2 |
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