Pregenerated sensors for LY6E (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022587Ensembl transcript IDs: ENSMUST00000051698.14, ENSMUST00000169343.8, ENSMUST00000185861.7, ENSMUST00000185863.7, ENSMUST00000187284.7, ENSMUST00000187606.7, ENSMUST00000188042.2, ENSMUST00000188866.7, ENSMUST00000189186.7, ENSMUST00000190810.7, ENSMUST00000191127.7, ENSMUST00000191145.7, ENSMUST00000191436.7
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGTGGCAACAGCAGGCCTCTGAAGTCTCTGGGGCAGACAAAGCTTaGGAATGTGTGACCAGCCTGATGGGCCTGCCTTTATGGGTAGCT | + |
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Preference number: 1 (lower is better) Translates to: KWQQQASEVSGADKA*ECVTSLMGLPLWVA Trigger: AGCTACCCATAAAGGCAGGCCCATCAGGCTGGTCACACATTCCCAAGCTTTGTCTGCCCCAGAGACTTCAGAGGCCTGCTGTTGCCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| 3UTR GCA 90 bp | GGGATTTGCTATGCACCAGGCTGGCCTCCCAGAGACCTCTGCTTCTaGTATGATGGCATCATAGGAATGTATCACTGTATCGGGGTTGGT | + |
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Preference number: 1 (lower is better) Translates to: GICYAPGWPPRDLCF*YDGIIGMYHCIGVG Trigger: ACCAACCCCGATACAGTGATACATTCCTATGATGCCATCATAGCAGAAGCAGAGGTCTCTGGGAGGCCAGCCTGGTGCATAGCAAATCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| 3UTR TCA 90 bp | TTGCTATGCACCAGGCTGGCCTCCCAGAGACCTCTGCTTCTGCTATaGTGGCATCATAGGAATGTATCACTGTATCGGGGTTGGTCTTTC | + |
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Preference number: 1 (lower is better) Translates to: LLCTRLASQRPLLLL*WHHRNVSLYRGWSF Trigger: GAAAGACCAACCCCGATACAGTGATACATTCCTATGATGCCATCATAGCAGAAGCAGAGGTCTCTGGGAGGCCAGCCTGGTGCATAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| 3UTR GCA 90 bp | GTGGCGACACAGGCCTTCTGCTGTAGAATCTTTTCAGGTCTTCTTTaGCCACCCCAGAATCCAAGTGGCTTCATTCACACAGGGATACAC | + |
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Preference number: 1 (lower is better) Translates to: VATQAFCCRIFSGLL*PPQNPSGFIHTGIH Trigger: GTGTATCCCTGTGTGAATGAAGCCACTTGGATTCTGGGGTGGGCAAAGAAGACCTGAAAAGATTCTACAGCAGAAGGCCTGTGTCGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
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| 3UTR GCA 90 bp | ATTCCTGGGATTTGCTATGCACCAGGCTGGCCTCCCAGAGACCTCTaGTTCTGCTATGATGGCATCATAGGAATGTATCACTGTATCGGG | + |
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Preference number: 1 (lower is better) Translates to: IPGICYAPGWPPRDL*FCYDGIIGMYHCIG Trigger: CCCGATACAGTGATACATTCCTATGATGCCATCATAGCAGAAGCAGAGGTCTCTGGGAGGCCAGCCTGGTGCATAGCAAATCCCAGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| 3UTR TCA 90 bp | GATGGGCCTGCCTTTATGGGTAGCTGTACTTCTCAGCTTTCAGCCTaGGACAGCACACTTTCAAGTTCTCTCTGCCTTTGCTCTCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: DGPAFMGSCTSQLSA*DSTLSSSLCLCSLS Trigger: AGAGAGAGAGCAAAGGCAGAGAGAACTTGAAAGTGTGCTGTCTCAGGCTGAAAGCTGAGAAGTACAGCTACCCATAAAGGCAGGCCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| 3UTR TCA 90 bp | TGCCCACCCCAGAATCCAAGTGGCTTCATTCACACAGGGATACACTaGGCACACAGATATACATCTATTTGGATTAGACATCCTTGTCAG | + |
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Preference number: 1 (lower is better) Translates to: CPPQNPSGFIHTGIH*AHRYTSIWIRHPCQ Trigger: CTGACAAGGATGTCTAATCCAAATAGATGTATATCTGTGTGCTCAGTGTATCCCTGTGTGAATGAAGCCACTTGGATTCTGGGGTGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
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| 3UTR-3UTR CCA 90 bp | AGGGCTGTGGGCCTGCAGGATCCCCAGGTCCCTTTGGACCGGAGGGGGAAGACGGTGGGAGCCTTCATCTaGAGGGGTGGCAGTCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: RAVGLQDPQVPLDRRGKTVGAFI*RGGSPP Trigger: TGGAGGACTGCCACCCCTCCAGATGAAGGCTCCCAC...CGTCTTCCCCCTCCGGTCCAAAGGGACCTGGGGATCCTGCAGGCCCACAGCCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| 3UTR-3UTR GCA 90 bp | GGGCCTAGATTCCTGGGATTTGCTATGCACCAGGCTGGCCTCCCAGAGACCTCTGCAGGGCTGTGGGCCTaGAGGATCCCCAGGTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: GPRFLGFAMHQAGLPETSAGLWA*RIPRSL Trigger: AAGGGACCTGGGGATCCTGCAGGCCCACAGCCCTGC...AGAGGTCTCTGGGAGGCCAGCCTGGTGCATAGCAAATCCCAGGAATCTAGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| 3UTR-3UTR TCA 90 bp | AGGGCTGTGGGCCTGCAGGATCCCCAGGTCCCTTTGGACCGGAGGGGGAAGACGCACACAGGGATACACTaGGCACACAGATATACATCT | + |
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Preference number: 2 (lower is better) Translates to: RAVGLQDPQVPLDRRGKTHTGIH*AHRYTS Trigger: AGATGTATATCTGTGTGCTCAGTGTATCCCTGTGTG...CGTCTTCCCCCTCCGGTCCAAAGGGACCTGGGGATCCTGCAGGCCCACAGCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| 3UTR-3UTR GCA 90 bp | CTCTCTCTCTTTTCTCTCAGGCCTGTCTCACTAAATGGGCCTAGATTCCTGGGAGCAGGGCTGTGGGCCTaGAGGATCCCCAGGTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: LSLFSLRPVSLNGPRFLGAGLWA*RIPRSL Trigger: AAGGGACCTGGGGATCCTGCAGGCCCACAGCCCTGC...TCCCAGGAATCTAGGCCCATTTAGTGAGACAGGCCTGAGAGAAAAGAGAGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| 3UTR-3UTR CCA 90 bp | GGGCCTAGATTCCTGGGATTTGCTATGCACCAGGCTGGCCTCCCAGAGACCTCTGGGCTTTTCCTGAGCTaGGGGGATATGGAGAACACA | + |
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Preference number: 2 (lower is better) Translates to: GPRFLGFAMHQAGLPETSGLFLS*GDMENT Trigger: TGTGTTCTCCATATCCCCCCAGCTCAGGAAAAGCCC...AGAGGTCTCTGGGAGGCCAGCCTGGTGCATAGCAAATCCCAGGAATCTAGGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| 3UTR-3UTR CCA 90 bp | CTAAATGGGCCTAGATTCCTGGGATTTGCTATGCACCAGGCTGGCCTCCCAGAGGTTCCTAGGGTCCCCTaGGACCTAAAAGGAGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LNGPRFLGFAMHQAGLPEVPRVP*DLKGAG Trigger: CCCAGCTCCTTTTAGGTCCCAGGGGACCCTAGGAAC...CTCTGGGAGGCCAGCCTGGTGCATAGCAAATCCCAGGAATCTAGGCCCATTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| 3UTR-3UTR CCA 90 bp | TGGTACTTAGCCCTGACGTTGAGAGAGTGTGGAGGGGGAACTAGACACACCCAGGGGCTTTTCCTGAGCTaGGGGGATATGGAGAACACA | + |
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Preference number: 2 (lower is better) Translates to: WYLALTLRECGGGTRHTQGLFLS*GDMENT Trigger: TGTGTTCTCCATATCCCCCCAGCTCAGGAAAAGCCC...CTGGGTGTGTCTAGTTCCCCCTCCACACTCTCTCAACGTCAGGGCTAAGTACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
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| 3UTR-3UTR CCA 90 bp | ACTAGACACACCCAGGAGGAGCTGAAGGTTCCTAGGGTCCCCTGGGACCTAAAAGGGCTTTTCCTGAGCTaGGGGGATATGGAGAACACA | + |
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Preference number: 2 (lower is better) Translates to: TRHTQEELKVPRVPWDLKGLFLS*GDMENT Trigger: TGTGTTCTCCATATCCCCCCAGCTCAGGAAAAGCCC...TTTTAGGTCCCAGGGGACCCTAGGAACCTTCAGCTCCTCCTGGGTGTGTCTAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188042.2 ENSMUST00000188866.7 ENSMUST00000191436.7 |
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| 3UTR-3UTR GCA 90 bp | GTGGACAAGTATCACTTGCCTGGGCCAGACTCCCATGGCTTAGACTACAGGGTACCTCCCAGAGACCTCTaGTTCTGCTATGATGGCATC | + |
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Preference number: 2 (lower is better) Translates to: VDKYHLPGPDSHGLDYRVPPRDL*FCYDGI Trigger: GATGCCATCATAGCAGAAGCAGAGGTCTCTGGGAGG...TACCCTGTAGTCTAAGCCATGGGAGTCTGGCCCAGGCAAGTGATACTTGTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| 3UTR-3UTR CCA 90 bp | AGGGTAGCCAGTACCACTTCAACAGAGCAGGTATGGGTGAGTTTGGTACTTAGCGTTCCTAGGGTCCCCTaGGACCTAAAAGGAGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: RVASTTSTEQVWVSLVLSVPRVP*DLKGAG Trigger: CCCAGCTCCTTTTAGGTCCCAGGGGACCCTAGGAAC...GCTAAGTACCAAACTCACCCATACCTGCTCTGTTGAAGTGGTACTGGCTACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
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| 3UTR-3UTR CCA 90 bp | GGAAGACGGGTTAAGGACAACCAGGACATAGCAGGAAAGGGTGTGAACGGTTTAGGACCTAAAAGGAGCTaGGCTTTTCCTGAGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: GRRVKDNQDIAGKGVNGLGPKRS*AFPELG Trigger: CCCCAGCTCAGGAAAAGCCCAGCTCCTTTTAGGTCC...TAAACCGTTCACACCCTTTCCTGCTATGTCCTGGTTGTCCTTAACCCGTCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| 3UTR-3UTR CCA 90 bp | AGGCCTTCTGCTGTAGAATCTTTTCAGGTCTTCTTTGCCCACCCCAGAATCCAAGTTCCTAGGGTCCCCTaGGACCTAAAAGGAGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: RPSAVESFQVFFAHPRIQVPRVP*DLKGAG Trigger: CCCAGCTCCTTTTAGGTCCCAGGGGACCCTAGGAAC...TTGGATTCTGGGGTGGGCAAAGAAGACCTGAAAAGATTCTACAGCAGAAGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCTTCTGCTATGATGGCATCATAGGAATGTATCACTGTATCGGGGTTGGTGTGGGAGCCTTCATCTaGAGGGGTGGCAGTCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: LCFCYDGIIGMYHCIGVGVGAFI*RGGSPP Trigger: TGGAGGACTGCCACCCCTCCAGATGAAGGCTCCCAC...ACCAACCCCGATACAGTGATACATTCCTATGATGCCATCATAGCAGAAGCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| 3UTR-3UTR CCA 90 bp | GTACTTCTCAGCTTTCAGCCTGAGACAGCACACTTTCAAGTTCTCTCTGCCTTTGTGGGAGCCTTCATCTaGAGGGGTGGCAGTCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: VLLSFQPETAHFQVLSAFVGAFI*RGGSPP Trigger: TGGAGGACTGCCACCCCTCCAGATGAAGGCTCCCAC...AAAGGCAGAGAGAACTTGAAAGTGTGCTGTCTCAGGCTGAAAGCTGAGAAGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGCAAAGCAAAGCCAGTTATAGGGTGGACAAGTATCACTTGCCTGGGCCAGGACCTAAAAGGAGCTaGGCTTTTCCTGAGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: RKQSKASYRVDKYHLPGPGPKRS*AFPELG Trigger: CCCCAGCTCAGGAAAAGCCCAGCTCCTTTTAGGTCC...TGGCCCAGGCAAGTGATACTTGTCCACCCTATAACTGGCTTTGCTTTGCTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| 3UTR-3UTR CCA 90 bp | GCCCACCCCAGAATCCAAGTGGCTTCATTCACACAGGGATACACTGAGCACACATCAACAGAGCAGGTATaGGTGAGTTTGGTACTTAGC | + |
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Preference number: 2 (lower is better) Translates to: AHPRIQVASFTQGYTEHTSTEQV*VSLVLS Trigger: GCTAAGTACCAAACTCACCCATACCTGCTCTGTTGA...TGTGTGCTCAGTGTATCCCTGTGTGAATGAAGCCACTTGGATTCTGGGGTGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
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| 3UTR CAA 90 bp | ACCAGAAAGCAAAGCAAAGCCAGTTATAGGGTGGACAAGTATCACTaGCCTGGGCCAGACTCCCATGGCTTAGACTACAGGGTAGTTTAT | + |
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Preference number: 2 (lower is better) Translates to: TRKQSKASYRVDKYH*PGPDSHGLDYRVVY Trigger: ATAAACTACCCTGTAGTCTAAGCCATGGGAGTCTGGCCCAGGCAAGTGATACTTGTCCACCCTATAACTGGCTTTGCTTTGCTTTCTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTCTCTTTTCTCTCAGGCCTGTCTCACTAAATGGGCCTAGATTCCTGGGATCAACAGAGCAGGTATaGGTGAGTTTGGTACTTAGC | + |
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Preference number: 2 (lower is better) Translates to: LSLFSLRPVSLNGPRFLGSTEQV*VSLVLS Trigger: GCTAAGTACCAAACTCACCCATACCTGCTCTGTTGA...TCCCAGGAATCTAGGCCCATTTAGTGAGACAGGCCTGAGAGAAAAGAGAGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| 3UTR-3UTR CCA 90 bp | TTTCAGGTCTTCTTTGCCCACCCCAGAATCCAAGTGGCTTCATTCACACAGGGATCAACAGAGCAGGTATaGGTGAGTTTGGTACTTAGC | + |
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Preference number: 2 (lower is better) Translates to: FQVFFAHPRIQVASFTQGSTEQV*VSLVLS Trigger: GCTAAGTACCAAACTCACCCATACCTGCTCTGTTGA...TCCCTGTGTGAATGAAGCCACTTGGATTCTGGGGTGGGCAAAGAAGACCTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
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| 3UTR-3UTR CCA 90 bp | AGGCCTTCTGCTGTAGAATCTTTTCAGGTCTTCTTTGCCCACCCCAGAATCCAATCAACAGAGCAGGTATaGGTGAGTTTGGTACTTAGC | + |
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Preference number: 2 (lower is better) Translates to: RPSAVESFQVFFAHPRIQSTEQV*VSLVLS Trigger: GCTAAGTACCAAACTCACCCATACCTGCTCTGTTGA...TTGGATTCTGGGGTGGGCAAAGAAGACCTGAAAAGATTCTACAGCAGAAGGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
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| 3UTR CCA 72 bp | GCAGGGCTGTGGGCCTGCAGGATCCCCAGGTCCCTTTaGACCGGAGGGGGAAGACGGGTTAAGGACAACCAG | + |
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Preference number: 3 (lower is better) Translates to: AGLWACRIPRSL*TGGGRRVKDNQ Trigger: CTGGTTGTCCTTAACCCGTCTTCCCCCTCCGGTCCAAAGGGACCTGGGGATCCTGCAGGCCCACAGCCCTGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| 3UTR CCA 72 bp | ACTGCATCGGGTAGTGGGAGCCTTCATCTGGAGGGGTaGCAGTCCTCCATGGGCAGCCTCCTGAACAGAGTA | + |
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Preference number: 3 (lower is better) Translates to: TASGSGSLHLEG*QSSMGSLLNRV Trigger: TACTCTGTTCAGGAGGCTGCCCATGGAGGACTGCCACCCCTCCAGATGAAGGCTCCCACTACCCGATGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
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| 3UTR CCA 72 bp | AGCAGCAGGAAGCCAGTGTGGGCAGAGAGGGCAGGATaGGACTCAACTGCATCGGGTAGTGGGAGCCTTCAT | + |
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Preference number: 3 (lower is better) Translates to: SSRKPVWAERAG*DSTASGSGSLH Trigger: ATGAAGGCTCCCACTACCCGATGCAGTTGAGTCCCATCCTGCCCTCTCTGCCCACACTGGCTTCCTGCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
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| 3UTR-3UTR CAA 90 bp | AGCCAGTGTGGGCAGAGAGGGCAGGATGGGACTCAACTGCATCGGGTAGTGGGACTTTTCAGGTCTTCTTaGCCCACCCCAGAATCCAAG | + |
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Preference number: 3 (lower is better) Translates to: SQCGQRGQDGTQLHRVVGLFRSS*PTPESK Trigger: CTTGGATTCTGGGGTGGGCAAAGAAGACCTGAAAAG...TCCCACTACCCGATGCAGTTGAGTCCCATCCTGCCCTCTCTGCCCACACTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
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| 3UTR-3UTR CAA 90 bp | GGGCCTAGATTCCTGGGATTTGCTATGCACCAGGCTGGCCTCCCAGAGACCTCTCTTTTCAGGTCTTCTTaGCCCACCCCAGAATCCAAG | + |
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Preference number: 3 (lower is better) Translates to: GPRFLGFAMHQAGLPETSLFRSS*PTPESK Trigger: CTTGGATTCTGGGGTGGGCAAAGAAGACCTGAAAAG...AGAGGTCTCTGGGAGGCCAGCCTGGTGCATAGCAAATCCCAGGAATCTAGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| 3UTR-3UTR CAA 90 bp | CTAAATGGGCCTAGATTCCTGGGATTTGCTATGCACCAGGCTGGCCTCCCAGAGCTTTTCAGGTCTTCTTaGCCCACCCCAGAATCCAAG | + |
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Preference number: 3 (lower is better) Translates to: LNGPRFLGFAMHQAGLPELFRSS*PTPESK Trigger: CTTGGATTCTGGGGTGGGCAAAGAAGACCTGAAAAG...CTCTGGGAGGCCAGCCTGGTGCATAGCAAATCCCAGGAATCTAGGCCCATTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| 3UTR TCA 72 bp | ACCAGGCTGGCCTCCCAGAGACCTCTGCTTCTGCTATaGTGGCATCATAGGAATGTATCACTGTATCGGGGT | + |
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Preference number: 3 (lower is better) Translates to: TRLASQRPLLLL*WHHRNVSLYRG Trigger: ACCCCGATACAGTGATACATTCCTATGATGCCATCATAGCAGAAGCAGAGGTCTCTGGGAGGCCAGCCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| 3UTR CCA 72 bp | TGGGAATGTGTGACCAGCCTGATGGGCCTGCCTTTATaGGTAGCTGTACTTCTCAGCTTTCAGCCTGAGACA | + |
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Preference number: 3 (lower is better) Translates to: WECVTSLMGLPL*VAVLLSFQPET Trigger: TGTCTCAGGCTGAAAGCTGAGAAGTACAGCTACCCATAAAGGCAGGCCCATCAGGCTGGTCACACATTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| 3UTR-3UTR CAA 90 bp | AGATTCCTGGGATTTGCTATGCACCAGGCTGGCCTCCCAGAGACCTCTGCTTCTCTGACTCTGGTACTCTaGAGACTCCAAGGAGATCTT | + |
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Preference number: 3 (lower is better) Translates to: RFLGFAMHQAGLPETSASLTLVL*RLQGDL Trigger: AAGATCTCCTTGGAGTCTCAAGAGTACCAGAGTCAG...AGAAGCAGAGGTCTCTGGGAGGCCAGCCTGGTGCATAGCAAATCCCAGGAATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| 3UTR-3UTR CAA 90 bp | GTGGACAAGTATCACTTGCCTGGGCCAGACTCCCATGGCTTAGACTACAGGGTACTTTTCAGGTCTTCTTaGCCCACCCCAGAATCCAAG | + |
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Preference number: 3 (lower is better) Translates to: VDKYHLPGPDSHGLDYRVLFRSS*PTPESK Trigger: CTTGGATTCTGGGGTGGGCAAAGAAGACCTGAAAAG...TACCCTGTAGTCTAAGCCATGGGAGTCTGGCCCAGGCAAGTGATACTTGTCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| 3UTR-3UTR CAA 90 bp | TGTGACCAGCCTGATGGGCCTGCCTTTATGGGTAGCTGTACTTCTCAGCTTTCACAGGTATGGGTGAGTTaGGTACTTAGCCCTGACGTT | + |
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Preference number: 3 (lower is better) Translates to: CDQPDGPAFMGSCTSQLSQVWVS*VLSPDV Trigger: AACGTCAGGGCTAAGTACCAAACTCACCCATACCTG...TGAAAGCTGAGAAGTACAGCTACCCATAAAGGCAGGCCCATCAGGCTGGTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| 3UTR TCA 72 bp | CCAGGACATAGCAGGAAAGGGTGTGAACGGTTTATTTaGGGCACTAGAATAGCAGCAGGAAGCCAGTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: PGHSRKGCERFI*GTRIAAGSQCG Trigger: CCCACACTGGCTTCCTGCTGCTATTCTAGTGCCTCAAATAAACCGTTCACACCCTTTCCTGCTATGTCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| 3UTR-3UTR CAA 90 bp | GTCTTCTTTGCCCACCCCAGAATCCAAGTGGCTTCATTCACACAGGGATACACTCAGGTATGGGTGAGTTaGGTACTTAGCCCTGACGTT | + |
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Preference number: 3 (lower is better) Translates to: VFFAHPRIQVASFTQGYTQVWVS*VLSPDV Trigger: AACGTCAGGGCTAAGTACCAAACTCACCCATACCTG...AGTGTATCCCTGTGTGAATGAAGCCACTTGGATTCTGGGGTGGGCAAAGAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
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| 3UTR-3UTR CAA 90 bp | TTGGTGGCGACACAGGCCTTCTGCTGTAGAATCTTTTCAGGTCTTCTTTGCCCAAGGGAGGTTATAGGATaGGCTCTGGAAGCAAGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: LVATQAFCCRIFSGLLCPREVIG*ALEARV Trigger: TACCCTTGCTTCCAGAGCCAATCCTATAACCTCCCT...TGGGCAAAGAAGACCTGAAAAGATTCTACAGCAGAAGGCCTGTGTCGCCACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCTCTCTTTTCTCTCAGGCCTGTCTCACTAAATGGGCCTAGATTCCTGGGAAGGGAGGTTATAGGATaGGCTCTGGAAGCAAGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: LSLFSLRPVSLNGPRFLGREVIG*ALEARV Trigger: TACCCTTGCTTCCAGAGCCAATCCTATAACCTCCCT...TCCCAGGAATCTAGGCCCATTTAGTGAGACAGGCCTGAGAGAAAAGAGAGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
||
| 3UTR TCA 72 bp | GTAGTTTATGAAGGACAAGTGGCAACAGCAGGCCTCTaGAGTCTCTGGGGCAGACAAAGCTTGGGAATGTGT | + |
|
Preference number: 3 (lower is better) Translates to: VVYEGQVATAGL*SLWGRQSLGMC Trigger: ACACATTCCCAAGCTTTGTCTGCCCCAGAGACTTCAGAGGCCTGCTGTTGCCACTTGTCCTTCATAAACTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
||
| 3UTR GCA 72 bp | TATGCACCAGGCTGGCCTCCCAGAGACCTCTGCTTCTaGTATGATGGCATCATAGGAATGTATCACTGTATC | + |
|
Preference number: 3 (lower is better) Translates to: YAPGWPPRDLCF*YDGIIGMYHCI Trigger: GATACAGTGATACATTCCTATGATGCCATCATAGCAGAAGCAGAGGTCTCTGGGAGGCCAGCCTGGTGCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
||
| 3UTR GCA 72 bp | ATTTGCTATGCACCAGGCTGGCCTCCCAGAGACCTCTaGTTCTGCTATGATGGCATCATAGGAATGTATCAC | + |
|
Preference number: 3 (lower is better) Translates to: ICYAPGWPPRDL*FCYDGIIGMYH Trigger: GTGATACATTCCTATGATGCCATCATAGCAGAAGCAGAGGTCTCTGGGAGGCCAGCCTGGTGCATAGCAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
||
| 3UTR CCA 72 bp | CTTTTCAGGTCTTCTTTGCCCACCCCAGAATCCAAGTaGCTTCATTCACACAGGGATACACTGAGCACACAG | + |
|
Preference number: 3 (lower is better) Translates to: LFRSSLPTPESK*LHSHRDTLSTQ Trigger: CTGTGTGCTCAGTGTATCCCTGTGTGAATGAAGCCACTTGGATTCTGGGGTGGGCAAAGAAGACCTGAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGACGGGTTAAGGACAACCAGGACATAGCAGGAAAGGGTGTGAACGGTTTACTGACTCTGGTACTCTaGAGACTCCAAGGAGATCTT | + |
|
Preference number: 3 (lower is better) Translates to: GRRVKDNQDIAGKGVNGLLTLVL*RLQGDL Trigger: AAGATCTCCTTGGAGTCTCAAGAGTACCAGAGTCAG...TAAACCGTTCACACCCTTTCCTGCTATGTCCTGGTTGTCCTTAACCCGTCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
||
| 3UTR-3UTR CAA 90 bp | TTTCAGGTCTTCTTTGCCCACCCCAGAATCCAAGTGGCTTCATTCACACAGGGACTGACTCTGGTACTCTaGAGACTCCAAGGAGATCTT | + |
|
Preference number: 3 (lower is better) Translates to: FQVFFAHPRIQVASFTQGLTLVL*RLQGDL Trigger: AAGATCTCCTTGGAGTCTCAAGAGTACCAGAGTCAG...TCCCTGTGTGAATGAAGCCACTTGGATTCTGGGGTGGGCAAAGAAGACCTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
||
| 3UTR TCA 72 bp | GCCTTTATGGGTAGCTGTACTTCTCAGCTTTCAGCCTaGGACAGCACACTTTCAAGTTCTCTCTGCCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: AFMGSCTSQLSA*DSTLSSSLCLC Trigger: GCAAAGGCAGAGAGAACTTGAAAGTGTGCTGTCTCAGGCTGAAAGCTGAGAAGTACAGCTACCCATAAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
||
| 3UTR GCA 72 bp | CAGGCCTTCTGCTGTAGAATCTTTTCAGGTCTTCTTTaGCCACCCCAGAATCCAAGTGGCTTCATTCACACA | + |
|
Preference number: 3 (lower is better) Translates to: QAFCCRIFSGLL*PPQNPSGFIHT Trigger: TGTGTGAATGAAGCCACTTGGATTCTGGGGTGGGCAAAGAAGACCTGAAAAGATTCTACAGCAGAAGGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
||
| 3UTR-3UTR CAA 90 bp | GTACTTCTCAGCTTTCAGCCTGAGACAGCACACTTTCAAGTTCTCTCTGCCTTTCTGACTCTGGTACTCTaGAGACTCCAAGGAGATCTT | + |
|
Preference number: 3 (lower is better) Translates to: VLLSFQPETAHFQVLSAFLTLVL*RLQGDL Trigger: AAGATCTCCTTGGAGTCTCAAGAGTACCAGAGTCAG...AAAGGCAGAGAGAACTTGAAAGTGTGCTGTCTCAGGCTGAAAGCTGAGAAGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
||
| 3UTR CCA 72 bp | AAAATACCAGAAAGCAAAGCAAAGCCAGTTATAGGGTaGACAAGTATCACTTGCCTGGGCCAGACTCCCATG | + |
|
Preference number: 3 (lower is better) Translates to: KIPESKAKPVIG*TSITCLGQTPM Trigger: CATGGGAGTCTGGCCCAGGCAAGTGATACTTGTCCACCCTATAACTGGCTTTGCTTTGCTTTCTGGTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
||
| 3UTR-3UTR CAA 90 bp | ACTGAGCACACAGATATACATCTATTTGGATTAGACATCCTTGTCAGTGTGTCCCAGGTATGGGTGAGTTaGGTACTTAGCCCTGACGTT | + |
|
Preference number: 3 (lower is better) Translates to: TEHTDIHLFGLDILVSVSQVWVS*VLSPDV Trigger: AACGTCAGGGCTAAGTACCAAACTCACCCATACCTG...GGACACACTGACAAGGATGTCTAATCCAAATAGATGTATATCTGTGTGCTCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
||
| 3UTR TCA 72 bp | CAGAATCCAAGTGGCTTCATTCACACAGGGATACACTaGGCACACAGATATACATCTATTTGGATTAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: QNPSGFIHTGIH*AHRYTSIWIRH Trigger: ATGTCTAATCCAAATAGATGTATATCTGTGTGCTCAGTGTATCCCTGTGTGAATGAAGCCACTTGGATTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
||
| CDS-3UTR GCA 90 bp | CAGGGCTGTGGGCCTGCAGGATCCCCAGGTCCCTTTGGACCGGAGGGGGAAGACAATGAACTTGCTCCATaGCCAGAAGGGCTGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: QGCGPAGSPGPFGPEGEDNELAP*PEGLPT Trigger: TGTTGGCAGCCCTTCTGGGCATGGAGCAAGTTCATT...GTCTTCCCCCTCCGGTCCAAAGGGACCTGGGGATCCTGCAGGCCCACAGCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
||
| CDS-3UTR TCA 90 bp | AGCCAGTGTGGGCAGAGAGGGCAGGATGGGACTCAACTGCATCGGGTAGTGGGACTTCTGATCGGTACATaGGAAGCACATCAGGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: SQCGQRGQDGTQLHRVVGLLIGT*EAHQGM Trigger: CATTCCCTGATGTGCTTCTCATGTACCGATCAGAAG...TCCCACTACCCGATGCAGTTGAGTCCCATCCTGCCCTCTCTGCCCACACTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
||
| CDS-3UTR TCA 90 bp | ACTAGACACACCCAGGAGGAGCTGAAGGTTCCTAGGGTCCCCTGGGACCTAAAAGTCTTTCTCCTGGCATaGAACTGGCCACAGGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TRHTQEELKVPRVPWDLKVFLLA*NWPQAV Trigger: AACTGCCTGTGGCCAGTTTCATGCCAGGAGAAAGAC...TTTTAGGTCCCAGGGGACCCTAGGAACCTTCAGCTCCTCCTGGGTGTGTCTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188042.2 ENSMUST00000188866.7 ENSMUST00000191436.7 |
||
| CDS-3UTR GCA 90 bp | AGACACACCCAGGAGGAGCTGAAGGTTCCTAGGGTCCCCTGGGACCTAAAAGGAAATGAACTTGCTCCATaGCCAGAAGGGCTGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: RHTQEELKVPRVPWDLKGNELAP*PEGLPT Trigger: TGTTGGCAGCCCTTCTGGGCATGGAGCAAGTTCATT...TCCTTTTAGGTCCCAGGGGACCCTAGGAACCTTCAGCTCCTCCTGGGTGTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188042.2 ENSMUST00000188866.7 ENSMUST00000191436.7 |
||
| CDS-3UTR GCA 90 bp | GCCCACCCCAGAATCCAAGTGGCTTCATTCACACAGGGATACACTGAGCACACAAAGTCCGAGGCCAGCTaGGCTGAAGTTGCAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AHPRIQVASFTQGYTEHTKSEAS*AEVAEG Trigger: TCCTTCTGCAACTTCAGCGCAGCTGGCCTCGGACTT...TGTGTGCTCAGTGTATCCCTGTGTGAATGAAGCCACTTGGATTCTGGGGTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
||
| 3UTR CAA 72 bp | GTGTGTCCACAAGATTCGGCGCTGACTCTGGTACTCTaGAGACTCCAAGGAGATCTTCACCCCTTCGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VCPQDSALTLVL*RLQGDLHPFAG Trigger: ACCAGCGAAGGGGTGAAGATCTCCTTGGAGTCTCAAGAGTACCAGAGTCAGCGCCGAATCTTGTGGACACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
||
| CDS-3UTR TCA 90 bp | AGACACACCCAGGAGGAGCTGAAGGTTCCTAGGGTCCCCTGGGACCTAAAAGGACTTCTGATCGGTACATaGGAAGCACATCAGGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: RHTQEELKVPRVPWDLKGLLIGT*EAHQGM Trigger: CATTCCCTGATGTGCTTCTCATGTACCGATCAGAAG...TCCTTTTAGGTCCCAGGGGACCCTAGGAACCTTCAGCTCCTCCTGGGTGTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188042.2 ENSMUST00000188866.7 ENSMUST00000191436.7 |
||
| CDS-3UTR GCA 90 bp | ACTAGACACACCCAGGAGGAGCTGAAGGTTCCTAGGGTCCCCTGGGACCTAAAAAATGAACTTGCTCCATaGCCAGAAGGGCTGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: TRHTQEELKVPRVPWDLKNELAP*PEGLPT Trigger: TGTTGGCAGCCCTTCTGGGCATGGAGCAAGTTCATT...TTTTAGGTCCCAGGGGACCCTAGGAACCTTCAGCTCCTCCTGGGTGTGTCTAGT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188042.2 ENSMUST00000188866.7 ENSMUST00000191436.7 |
||
| CDS-3UTR GCA 90 bp | TGGTACTTAGCCCTGACGTTGAGAGAGTGTGGAGGGGGAACTAGACACACCCAGAATGAACTTGCTCCATaGCCAGAAGGGCTGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: WYLALTLRECGGGTRHTQNELAP*PEGLPT Trigger: TGTTGGCAGCCCTTCTGGGCATGGAGCAAGTTCATT...CTGGGTGTGTCTAGTTCCCCCTCCACACTCTCTCAACGTCAGGGCTAAGTACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
||
| 3UTR CAA 72 bp | GCCAGTACCACTTCAACAGAGCAGGTATGGGTGAGTTaGGTACTTAGCCCTGACGTTGAGAGAGTGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASTTSTEQVWVS*VLSPDVERVWR Trigger: CCTCCACACTCTCTCAACGTCAGGGCTAAGTACCAAACTCACCCATACCTGCTCTGTTGAAGTGGTACTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
||
| CDS-3UTR TCA 90 bp | GGAAGACGGGTTAAGGACAACCAGGACATAGCAGGAAAGGGTGTGAACGGTTTAGTCTTTCTCCTGGCATaGAACTGGCCACAGGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GRRVKDNQDIAGKGVNGLVFLLA*NWPQAV Trigger: AACTGCCTGTGGCCAGTTTCATGCCAGGAGAAAGAC...TAAACCGTTCACACCCTTTCCTGCTATGTCCTGGTTGTCCTTAACCCGTCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
||
| CDS-3UTR TCA 90 bp | GTCTTCTTTGCCCACCCCAGAATCCAAGTGGCTTCATTCACACAGGGATACACTGTCTTTCTCCTGGCATaGAACTGGCCACAGGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VFFAHPRIQVASFTQGYTVFLLA*NWPQAV Trigger: AACTGCCTGTGGCCAGTTTCATGCCAGGAGAAAGAC...AGTGTATCCCTGTGTGAATGAAGCCACTTGGATTCTGGGGTGGGCAAAGAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
||
| CDS-3UTR TCA 90 bp | TTGGTGGCGACACAGGCCTTCTGCTGTAGAATCTTTTCAGGTCTTCTTTGCCCAGTCTTTCTCCTGGCATaGAACTGGCCACAGGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LVATQAFCCRIFSGLLCPVFLLA*NWPQAV Trigger: AACTGCCTGTGGCCAGTTTCATGCCAGGAGAAAGAC...TGGGCAAAGAAGACCTGAAAAGATTCTACAGCAGAAGGCCTGTGTCGCCACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
||
| 3UTR CAA 72 bp | CAAAGCAAAGCCAGTTATAGGGTGGACAAGTATCACTaGCCTGGGCCAGACTCCCATGGCTTAGACTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSKASYRVDKYH*PGPDSHGLDYR Trigger: CCTGTAGTCTAAGCCATGGGAGTCTGGCCCAGGCAAGTGATACTTGTCCACCCTATAACTGGCTTTGCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
||
| CDS-3UTR TCA 90 bp | CGACACAGGCCTTCTGCTGTAGAATCTTTTCAGGTCTTCTTTGCCCACCCCAGACTTCTGATCGGTACATaGGAAGCACATCAGGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: RHRPSAVESFQVFFAHPRLLIGT*EAHQGM Trigger: CATTCCCTGATGTGCTTCTCATGTACCGATCAGAAG...TCTGGGGTGGGCAAAGAAGACCTGAAAAGATTCTACAGCAGAAGGCCTGTGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
||
| CDS-3UTR TCA 90 bp | TTTCAGGTCTTCTTTGCCCACCCCAGAATCCAAGTGGCTTCATTCACACAGGGACTTCTGATCGGTACATaGGAAGCACATCAGGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: FQVFFAHPRIQVASFTQGLLIGT*EAHQGM Trigger: CATTCCCTGATGTGCTTCTCATGTACCGATCAGAAG...TCCCTGTGTGAATGAAGCCACTTGGATTCTGGGGTGGGCAAAGAAGACCTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
||
| CDS-3UTR TCA 90 bp | AGGCCTTCTGCTGTAGAATCTTTTCAGGTCTTCTTTGCCCACCCCAGAATCCAACTTCTGATCGGTACATaGGAAGCACATCAGGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: RPSAVESFQVFFAHPRIQLLIGT*EAHQGM Trigger: CATTCCCTGATGTGCTTCTCATGTACCGATCAGAAG...TTGGATTCTGGGGTGGGCAAAGAAGACCTGAAAAGATTCTACAGCAGAAGGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
||
| CDS-3UTR CAA 90 bp | CAGGGCTGTGGGCCTGCAGGATCCCCAGGTCCCTTTGGACCGGAGGGGGAAGACGTTGCAGAAGGAGCTTaGGCAGCAGTAGCTGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: QGCGPAGSPGPFGPEGEDVAEGA*AAVAVH Trigger: GTGAACAGCTACTGCTGCCAAAGCTCCTTCTGCAAC...GTCTTCCCCCTCCGGTCCAAAGGGACCTGGGGATCCTGCAGGCCCACAGCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
||
| CDS-3UTR CAA 90 bp | TGTGGAGGGGGAACTAGACACACCCAGGAGGAGCTGAAGGTTCCTAGGGTCCCCCATCAGGGAATGAACTaGCTCCATGCCCAGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CGGGTRHTQEELKVPRVPHQGMN*LHAQKG Trigger: GCCCTTCTGGGCATGGAGCAAGTTCATTCCCTGATG...GGGGACCCTAGGAACCTTCAGCTCCTCCTGGGTGTGTCTAGTTCCCCCTCCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
||
| CDS-3UTR CAA 90 bp | GGGGGAACTAGACACACCCAGGAGGAGCTGAAGGTTCCTAGGGTCCCCTGGGACGTTGCAGAAGGAGCTTaGGCAGCAGTAGCTGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GGTRHTQEELKVPRVPWDVAEGA*AAVAVH Trigger: GTGAACAGCTACTGCTGCCAAAGCTCCTTCTGCAAC...GTCCCAGGGGACCCTAGGAACCTTCAGCTCCTCCTGGGTGTGTCTAGTTCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188042.2 ENSMUST00000188866.7 ENSMUST00000191436.7 |
||
| CDS-3UTR CAA 90 bp | AGCCAGTGTGGGCAGAGAGGGCAGGATGGGACTCAACTGCATCGGGTAGTGGGAGTTGCAGAAGGAGCTTaGGCAGCAGTAGCTGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SQCGQRGQDGTQLHRVVGVAEGA*AAVAVH Trigger: GTGAACAGCTACTGCTGCCAAAGCTCCTTCTGCAAC...TCCCACTACCCGATGCAGTTGAGTCCCATCCTGCCCTCTCTGCCCACACTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
||
| CDS-3UTR CAA 90 bp | GGGGGAACTAGACACACCCAGGAGGAGCTGAAGGTTCCTAGGGTCCCCTGGGACGACGCCACACCGAGATaGAGATTGACATTTTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GGTRHTQEELKVPRVPWDDATPR*RLTFSL Trigger: CAGTGAAAATGTCAATCTCAATCTCGGTGTGGCGTC...GTCCCAGGGGACCCTAGGAACCTTCAGCTCCTCCTGGGTGTGTCTAGTTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188042.2 ENSMUST00000188866.7 ENSMUST00000191436.7 |
||
| CDS-3UTR CAA 90 bp | GGGCCTAGATTCCTGGGATTTGCTATGCACCAGGCTGGCCTCCCAGAGACCTCTGTTGCAGAAGGAGCTTaGGCAGCAGTAGCTGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GPRFLGFAMHQAGLPETSVAEGA*AAVAVH Trigger: GTGAACAGCTACTGCTGCCAAAGCTCCTTCTGCAAC...AGAGGTCTCTGGGAGGCCAGCCTGGTGCATAGCAAATCCCAGGAATCTAGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
||
| CDS-3UTR CAA 90 bp | ACTAGACACACCCAGGAGGAGCTGAAGGTTCCTAGGGTCCCCTGGGACCTAAAACCAGCTGCGCTGAAGTaGCAGAAGGAGCTTTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TRHTQEELKVPRVPWDLKPAALK*QKELWQ Trigger: CTGCCAAAGCTCCTTCTGCAACTTCAGCGCAGCTGG...TTTTAGGTCCCAGGGGACCCTAGGAACCTTCAGCTCCTCCTGGGTGTGTCTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188042.2 ENSMUST00000188866.7 ENSMUST00000191436.7 |
||
| CDS-3UTR CAA 90 bp | AGATTCCTGGGATTTGCTATGCACCAGGCTGGCCTCCCAGAGACCTCTGCTTCTCATCAGGGAATGAACTaGCTCCATGCCCAGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RFLGFAMHQAGLPETSASHQGMN*LHAQKG Trigger: GCCCTTCTGGGCATGGAGCAAGTTCATTCCCTGATG...AGAAGCAGAGGTCTCTGGGAGGCCAGCCTGGTGCATAGCAAATCCCAGGAATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
||
| CDS-3UTR CAA 90 bp | ACTAGACACACCCAGGAGGAGCTGAAGGTTCCTAGGGTCCCCTGGGACCTAAAACATCAGGGAATGAACTaGCTCCATGCCCAGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TRHTQEELKVPRVPWDLKHQGMN*LHAQKG Trigger: GCCCTTCTGGGCATGGAGCAAGTTCATTCCCTGATG...TTTTAGGTCCCAGGGGACCCTAGGAACCTTCAGCTCCTCCTGGGTGTGTCTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188042.2 ENSMUST00000188866.7 ENSMUST00000191436.7 |
||
| CDS-3UTR CAA 90 bp | TGTGGAGGGGGAACTAGACACACCCAGGAGGAGCTGAAGGTTCCTAGGGTCCCCGACGCCACACCGAGATaGAGATTGACATTTTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: CGGGTRHTQEELKVPRVPDATPR*RLTFSL Trigger: CAGTGAAAATGTCAATCTCAATCTCGGTGTGGCGTC...GGGGACCCTAGGAACCTTCAGCTCCTCCTGGGTGTGTCTAGTTCCCCCTCCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
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| CDS-3UTR CAA 90 bp | CGACACAGGCCTTCTGCTGTAGAATCTTTTCAGGTCTTCTTTGCCCACCCCAGACATCAGGGAATGAACTaGCTCCATGCCCAGAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: RHRPSAVESFQVFFAHPRHQGMN*LHAQKG Trigger: GCCCTTCTGGGCATGGAGCAAGTTCATTCCCTGATG...TCTGGGGTGGGCAAAGAAGACCTGAAAAGATTCTACAGCAGAAGGCCTGTGTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
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| CDS-3UTR CAA 90 bp | AGACACACCCAGGAGGAGCTGAAGGTTCCTAGGGTCCCCTGGGACCTAAAAGGAGACGCCACACCGAGATaGAGATTGACATTTTCACTG | + |
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Preference number: 5 (lower is better) Translates to: RHTQEELKVPRVPWDLKGDATPR*RLTFSL Trigger: CAGTGAAAATGTCAATCTCAATCTCGGTGTGGCGTC...TCCTTTTAGGTCCCAGGGGACCCTAGGAACCTTCAGCTCCTCCTGGGTGTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188042.2 ENSMUST00000188866.7 ENSMUST00000191436.7 |
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| CDS-3UTR CAA 90 bp | GTCTTCTTTGCCCACCCCAGAATCCAAGTGGCTTCATTCACACAGGGATACACTCCAGCTGCGCTGAAGTaGCAGAAGGAGCTTTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: VFFAHPRIQVASFTQGYTPAALK*QKELWQ Trigger: CTGCCAAAGCTCCTTCTGCAACTTCAGCGCAGCTGG...AGTGTATCCCTGTGTGAATGAAGCCACTTGGATTCTGGGGTGGGCAAAGAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
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| CDS-3UTR CAA 90 bp | AGGGTAGCCAGTACCACTTCAACAGAGCAGGTATGGGTGAGTTTGGTACTTAGCCCAGCTGCGCTGAAGTaGCAGAAGGAGCTTTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: RVASTTSTEQVWVSLVLSPAALK*QKELWQ Trigger: CTGCCAAAGCTCCTTCTGCAACTTCAGCGCAGCTGG...GCTAAGTACCAAACTCACCCATACCTGCTCTGTTGAAGTGGTACTGGCTACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
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| CDS-3UTR CAA 90 bp | TTGGTGGCGACACAGGCCTTCTGCTGTAGAATCTTTTCAGGTCTTCTTTGCCCACCAGCTGCGCTGAAGTaGCAGAAGGAGCTTTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: LVATQAFCCRIFSGLLCPPAALK*QKELWQ Trigger: CTGCCAAAGCTCCTTCTGCAACTTCAGCGCAGCTGG...TGGGCAAAGAAGACCTGAAAAGATTCTACAGCAGAAGGCCTGTGTCGCCACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
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| CDS GCA 90 bp | TCTGATCGGTACATGAGAAGCACATCAGGGAATGAACTTGCTCCATaGCCAGAAGGGCTGCCAACAGCACAGGCAGGAAGACTCTCATGT | + |
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Preference number: 5 (lower is better) Translates to: SDRYMRSTSGNELAP*PEGLPTAQAGRLSC Trigger: ACATGAGAGTCTTCCTGCCTGTGCTGTTGGCAGCCCTTCTGGGCATGGAGCAAGTTCATTCCCTGATGTGCTTCTCATGTACCGATCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000185861.7 ENSMUST00000185863.7 ENSMUST00000187284.7 ENSMUST00000187606.7 ENSMUST00000188042.2 ENSMUST00000188866.7 ENSMUST00000189186.7 ENSMUST00000190810.7 ENSMUST00000191127.7 ENSMUST00000191145.7 ENSMUST00000191436.7 |
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| CDS-3UTR CAA 90 bp | TCAGGTCTTCTTTGCCCACCCCAGAATCCAAGTGGCTTCATTCACACAGGGATAGTTGCAGAAGGAGCTTaGGCAGCAGTAGCTGTTCAC | + |
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Preference number: 5 (lower is better) Translates to: SGLLCPPQNPSGFIHTGIVAEGA*AAVAVH Trigger: GTGAACAGCTACTGCTGCCAAAGCTCCTTCTGCAAC...TATCCCTGTGTGAATGAAGCCACTTGGATTCTGGGGTGGGCAAAGAAGACCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 ENSMUST00000191436.7 |
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| CDS-3UTR CAA 90 bp | GTACTTCTCAGCTTTCAGCCTGAGACAGCACACTTTCAAGTTCTCTCTGCCTTTCCAGCTGCGCTGAAGTaGCAGAAGGAGCTTTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: VLLSFQPETAHFQVLSAFPAALK*QKELWQ Trigger: CTGCCAAAGCTCCTTCTGCAACTTCAGCGCAGCTGG...AAAGGCAGAGAGAACTTGAAAGTGTGCTGTCTCAGGCTGAAAGCTGAGAAGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| CDS-3UTR CAA 90 bp | CTCTGCTTCTGCTATGATGGCATCATAGGAATGTATCACTGTATCGGGGTTGGTCATCAGGGAATGAACTaGCTCCATGCCCAGAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: LCFCYDGIIGMYHCIGVGHQGMN*LHAQKG Trigger: GCCCTTCTGGGCATGGAGCAAGTTCATTCCCTGATG...ACCAACCCCGATACAGTGATACATTCCTATGATGCCATCATAGCAGAAGCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| CDS-3UTR CAA 90 bp | TGTGACCAGCCTGATGGGCCTGCCTTTATGGGTAGCTGTACTTCTCAGCTTTCAGACGCCACACCGAGATaGAGATTGACATTTTCACTG | + |
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Preference number: 5 (lower is better) Translates to: CDQPDGPAFMGSCTSQLSDATPR*RLTFSL Trigger: CAGTGAAAATGTCAATCTCAATCTCGGTGTGGCGTC...TGAAAGCTGAGAAGTACAGCTACCCATAAAGGCAGGCCCATCAGGCTGGTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000188866.7 |
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| CDS CAA 72 bp | TCCGAGGCCAGCTGCGCTGAAGTTGCAGAAGGAGCTTaGGCAGCAGTAGCTGTTCACGGACGCCACACCGAG | + |
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Preference number: 6 (lower is better) Translates to: SEASCAEVAEGA*AAVAVHGRHTE Trigger: CTCGGTGTGGCGTCCGTGAACAGCTACTGCTGCCAAAGCTCCTTCTGCAACTTCAGCGCAGCTGGCCTCGGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000185861.7 ENSMUST00000187284.7 ENSMUST00000187606.7 ENSMUST00000188042.2 ENSMUST00000188866.7 ENSMUST00000190810.7 ENSMUST00000191127.7 ENSMUST00000191436.7 |
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| CDS TCA 72 bp | GTGGGATACTGGCACGAAGTCCGAGGCCAGCTGCGCTaGAGTTGCAGAAGGAGCTTTGGCAGCAGTAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: VGYWHEVRGQLR*SCRRSFGSSSC Trigger: ACAGCTACTGCTGCCAAAGCTCCTTCTGCAACTTCAGCGCAGCTGGCCTCGGACTTCGTGCCAGTATCCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000185861.7 ENSMUST00000187284.7 ENSMUST00000187606.7 ENSMUST00000188042.2 ENSMUST00000188866.7 ENSMUST00000191127.7 ENSMUST00000191436.7 |
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| CDS GCA 72 bp | CATCAGGGAATGAACTTGCTCCATGCCCAGAAGGGCTaGCAACAGCACAGGCAGGAAGACTCTCATGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: HQGMNLLHAQKG*QQHRQEDSHVG Trigger: TCCAACATGAGAGTCTTCCTGCCTGTGCTGTTGGCAGCCCTTCTGGGCATGGAGCAAGTTCATTCCCTGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000185861.7 ENSMUST00000185863.7 ENSMUST00000187284.7 ENSMUST00000187606.7 ENSMUST00000188042.2 ENSMUST00000188866.7 ENSMUST00000189186.7 ENSMUST00000190810.7 ENSMUST00000191127.7 ENSMUST00000191145.7 ENSMUST00000191436.7 |
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| CDS GCA 72 bp | TACATGAGAAGCACATCAGGGAATGAACTTGCTCCATaGCCAGAAGGGCTGCCAACAGCACAGGCAGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: YMRSTSGNELAP*PEGLPTAQAGR Trigger: TCTTCCTGCCTGTGCTGTTGGCAGCCCTTCTGGGCATGGAGCAAGTTCATTCCCTGATGTGCTTCTCATGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000185861.7 ENSMUST00000185863.7 ENSMUST00000187284.7 ENSMUST00000187606.7 ENSMUST00000188042.2 ENSMUST00000188866.7 ENSMUST00000189186.7 ENSMUST00000190810.7 ENSMUST00000191127.7 ENSMUST00000191145.7 ENSMUST00000191436.7 |
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| CDS TCA 72 bp | AGGAAGACTCTCATGTTGGAAGTGGCAGACATCTGCTaGAGGTTCGCAAGCCAAAGAAGCCTCACAGTCCAA | + |
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Preference number: 6 (lower is better) Translates to: RKTLMLEVADIC*RFASQRSLTVQ Trigger: TTGGACTGTGAGGCTTCTTTGGCTTGCGAACCTTCAGCAGATGTCTGCCACTTCCAACATGAGAGTCTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191145.7 |
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| CDS TCA 72 bp | AGGAAGACTCTCATGTTGGAAGTGGCAGACATCTGCTaGAGGTTCGCAAGCCAAAGAAGCCTACTCACAGTC | + |
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Preference number: 6 (lower is better) Translates to: RKTLMLEVADIC*RFASQRSLLTV Trigger: GACTGTGAGTAGGCTTCTTTGGCTTGCGAACCTTCAGCAGATGTCTGCCACTTCCAACATGAGAGTCTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185863.7 |
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| CDS TCA 72 bp | CCACAGGCAGTTTATATTGTTCTTCTGATCGGTACATaGGAAGCACATCAGGGAATGAACTTGCTCCATGCC | + |
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Preference number: 6 (lower is better) Translates to: PQAVYIVLLIGT*EAHQGMNLLHA Trigger: GGCATGGAGCAAGTTCATTCCCTGATGTGCTTCTCATGTACCGATCAGAAGAACAATATAAACTGCCTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000051698.14 ENSMUST00000169343.8 ENSMUST00000185861.7 ENSMUST00000185863.7 ENSMUST00000187284.7 ENSMUST00000187606.7 ENSMUST00000188042.2 ENSMUST00000188866.7 ENSMUST00000189186.7 ENSMUST00000190810.7 ENSMUST00000191127.7 ENSMUST00000191145.7 ENSMUST00000191436.7 |
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