Pregenerated sensors for LVRN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024481Ensembl transcript IDs: ENSMUST00000025358.4, ENSMUST00000234519.2
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGTCAAGTAGGAGTCAATGGTGCAGGCACTGCAGGAGAGAGAAGTaGGGGAGGGGCGGGAGGCAGCCTGTCTGTCTATCTGTCTGTCTG | + |
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Preference number: 1 (lower is better) Translates to: QSSRSQWCRHCRREK*GRGGRQPVCLSVCL Trigger: CAGACAGACAGATAGACAGACAGGCTGCCTCCCGCCCCTCCCCCACTTCTCTCTCCTGCAGTGCCTGCACCATTGACTCCTACTTGACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR GCA 90 bp | AAAGCACAGAGTATTTCAGGTCTGGATTTCCCTCCAGATGGAGTGTaGTCCCCATGGATGCGACTGATCTCACGCTCACTGGCCTCCACT | + |
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Preference number: 1 (lower is better) Translates to: KAQSISGLDFPPDGV*SPWMRLISRSLAST Trigger: AGTGGAGGCCAGTGAGCGTGAGATCAGTCGCATCCATGGGGAGCACACTCCATCTGGAGGGAAATCCAGACCTGAAATACTCTGTGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR CCA 90 bp | GGCTTTCTTTGGTTGAGCTTCATCCTAATCGATCTCCTTTATTTCTaGCTTCTGTGTCTTTACATCGCCTTAGGTTCCCACCGGTCTTTC | + |
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Preference number: 1 (lower is better) Translates to: GFLWLSFILIDLLYF*LLCLYIALGSHRSF Trigger: GAAAGACCGGTGGGAACCTAAGGCGATGTAAAGACACAGAAGCCAGAAATAAAGGAGATCGATTAGGATGAAGCTCAACCAAAGAAAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR CCA 90 bp | TGTTTGTTGATACTGTCTTTAAGAAAGCAGTTAAAATCATTTCAGTaGCTTTCTTGCTTGACGGGTAGCAAAAGTTTGCCCAGATACATG | + |
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Preference number: 1 (lower is better) Translates to: CLLILSLRKQLKSFQ*LSCLTGSKSLPRYM Trigger: CATGTATCTGGGCAAACTTTTGCTACCCGTCAAGCAAGAAAGCCACTGAAATGATTTTAACTGCTTTCTTAAAGACAGTATCAACAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR-3UTR CCA 90 bp | AAGGCGTTGTACAGTTACATCTTCTGGGTTTGTAAAGGGTGCCTTGTCAGTTATTGCAGGAGAGAGAAGTaGGGGAGGGGCGGGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: KALYSYIFWVCKGCLVSYCRREK*GRGGRQ Trigger: CTGCCTCCCGCCCCTCCCCCACTTCTCTCTCCTGCA...ATAACTGACAAGGCACCCTTTACAAACCCAGAAGATGTAACTGTACAACGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR-3UTR TCA 90 bp | GGAGCACTAGATGAGCAGCTACACAGTGTCTGTAGCAGGCGGGATGTGCTCTGTAACTGTGCTGTGGTCTaGCATTTGGTTCTCTTCCTA | + |
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Preference number: 2 (lower is better) Translates to: GALDEQLHSVCSRRDVLCNCAVV*HLVLFL Trigger: TAGGAAGAGAACCAAATGTCAGACCACAGCACAGTT...ACAGAGCACATCCCGCCTGCTACAGACACTGTGTAGCTGCTCATCTAGTGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR-3UTR GCA 90 bp | AAAGCCCTTGACCTCAGGCACTCTGAAAGAATGTCCTCTACAGCTACAGGCAAGCTGCAAGAAGCATCCTaGAAGAAGCATCCTGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: KALDLRHSERMSSTATGKLQEAS*KKHPAR Trigger: TCTTGCAGGATGCTTCTTGCAGGATGCTTCTTGCAG...CTTGCCTGTAGCTGTAGAGGACATTCTTTCAGAGTGCCTGAGGTCAAGGGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR-3UTR GCA 90 bp | GCAAGGCGTTGTACAGTTACATCTTCTGGGTTTGTAAAGGGTGCCTTGTCAGTTAGTAGGAGTCAATGGTaGAGGCACTGCAGGAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: ARRCTVTSSGFVKGALSVSRSQW*RHCRRE Trigger: CTCTCTCCTGCAGTGCCTGCACCATTGACTCCTACT...AACTGACAAGGCACCCTTTACAAACCCAGAAGATGTAACTGTACAACGCCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR-3UTR GCA 90 bp | AGGAATGCACAGCCATATGCAAGGCGTTGTACAGTTACATCTTCTGGGTTTGTAGCGGGATGTGCTCTGTaGTCTAAGCTCACTCCATGT | + |
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Preference number: 2 (lower is better) Translates to: RNAQPYARRCTVTSSGFVAGCAL*SKLTPC Trigger: ACATGGAGTGAGCTTAGAGCACAGAGCACATCCCGC...TACAAACCCAGAAGATGTAACTGTACAACGCCTTGCATATGGCTGTGCATTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR-3UTR CCA 90 bp | ATCGATCTCCTTTATTTCTGGCTTCTGTGTCTTTACATCGCCTTAGGTTCCCACGGATTTCCCTCCAGATaGAGTGTGCTCCCCATGGAT | + |
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Preference number: 2 (lower is better) Translates to: IDLLYFWLLCLYIALGSHGFPSR*SVLPMD Trigger: ATCCATGGGGAGCACACTCCATCTGGAGGGAAATCC...GTGGGAACCTAAGGCGATGTAAAGACACAGAAGCCAGAAATAAAGGAGATCGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR-3UTR CCA 90 bp | GACAGTAACAGTCAAGTAGGAGTCAATGGTGCAGGCACTGCAGGAGAGAGAAGTAGAGTATTTCAGGTCTaGATTTCCCTCCAGATGGAG | + |
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Preference number: 2 (lower is better) Translates to: DSNSQVGVNGAGTAGERSRVFQV*ISLQME Trigger: CTCCATCTGGAGGGAAATCCAGACCTGAAATACTCT...ACTTCTCTCTCCTGCAGTGCCTGCACCATTGACTCCTACTTGACTGTTACTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR-3UTR CCA 90 bp | GCAAGGCGTTGTACAGTTACATCTTCTGGGTTTGTAAAGGGTGCCTTGTCAGTTTCAAGTAGGAGTCAATaGTGCAGGCACTGCAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: ARRCTVTSSGFVKGALSVSSRSQ*CRHCRR Trigger: TCTCCTGCAGTGCCTGCACCATTGACTCCTACTTGA...AACTGACAAGGCACCCTTTACAAACCCAGAAGATGTAACTGTACAACGCCTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR-3UTR GCA 90 bp | AAAGCACAGAGTATTTCAGGTCTGGATTTCCCTCCAGATGGAGTGTGCTCCCCATTTCAGTGGCTTTCTTaGTTGACGGGTAGCAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: KAQSISGLDFPPDGVCSPFQWLS*LTGSKS Trigger: ACTTTTGCTACCCGTCAAGCAAGAAAGCCACTGAAA...TGGGGAGCACACTCCATCTGGAGGGAAATCCAGACCTGAAATACTCTGTGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR CAA 90 bp | AATTTCTCCTTAGCCCAGAAGATGAGTCTGCAAAGTTTAAAGCCCTaGACCTCAGGCACTCTGAAAGAATGTCCTCTACAGCTACAGGCA | + |
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Preference number: 2 (lower is better) Translates to: NFSLAQKMSLQSLKP*TSGTLKECPLQLQA Trigger: TGCCTGTAGCTGTAGAGGACATTCTTTCAGAGTGCCTGAGGTCAAGGGCTTTAAACTTTGCAGACTCATCTTCTGGGCTAAGGAGAAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR-3UTR TCA 90 bp | ATCGATCTCCTTTATTTCTGGCTTCTGTGTCTTTACATCGCCTTAGGTTCCCACAGTGGCTTTCTTGCTTaGCGGGTAGCAAAAGTTTGC | + |
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Preference number: 2 (lower is better) Translates to: IDLLYFWLLCLYIALGSHSGFLA*RVAKVC Trigger: GCAAACTTTTGCTACCCGTCAAGCAAGAAAGCCACT...GTGGGAACCTAAGGCGATGTAAAGACACAGAAGCCAGAAATAAAGGAGATCGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR-3UTR GCA 90 bp | AAGAATGTCCTCTACAGCTACAGGCAAGTACACAGAGTCACCACACAGAGTCCCAACAAGATTATGAGATaGAAGAAGCATCCTGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: KNVLYSYRQVHRVTTQSPNKIMR*KKHPAR Trigger: TCTTGCAGGATGCTTCTTGCATCTCATAATCTTGTT...GGGACTCTGTGTGGTGACTCTGTGTACTTGCCTGTAGCTGTAGAGGACATTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR-3UTR GCA 90 bp | GCAAGGCGTTGTACAGTTACATCTTCTGGGTTTGTAAAGGGTGCCTTGTCAGTTCACAATTGTGTGATGTaGATGGATGAGGAAACAGAC | + |
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Preference number: 2 (lower is better) Translates to: ARRCTVTSSGFVKGALSVHNCVM*MDEETD Trigger: GTCTGTTTCCTCATCCATGCACATCACACAATTGTG...AACTGACAAGGCACCCTTTACAAACCCAGAAGATGTAACTGTACAACGCCTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR-3UTR CCA 90 bp | AAAGCACAGAGTATTTCAGGTCTGGATTTCCCTCCAGATGGAGTGTGCTCCCCATTAAAATCATTTCAGTaGCTTTCTTGCTTGACGGGT | + |
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Preference number: 2 (lower is better) Translates to: KAQSISGLDFPPDGVCSPLKSFQ*LSCLTG Trigger: ACCCGTCAAGCAAGAAAGCCACTGAAATGATTTTAA...TGGGGAGCACACTCCATCTGGAGGGAAATCCAGACCTGAAATACTCTGTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR-3UTR TCA 90 bp | AGGAATGCACAGCCATATGCAAGGCGTTGTACAGTTACATCTTCTGGGTTTGTAGATACATGGCAATGTTaGCAAGATCCTCAGCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: RNAQPYARRCTVTSSGFVDTWQC*QDPQQR Trigger: TCTTTGCTGAGGATCTTGTCAACATTGCCATGTATC...TACAAACCCAGAAGATGTAACTGTACAACGCCTTGCATATGGCTGTGCATTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR-3UTR CCA 90 bp | GCAAGGCGTTGTACAGTTACATCTTCTGGGTTTGTAAAGGGTGCCTTGTCAGTTGTCTGTTTTGCTTTGTaGCATTTGAAAGTGTCGACT | + |
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Preference number: 2 (lower is better) Translates to: ARRCTVTSSGFVKGALSVVCFAL*HLKVST Trigger: AGTCGACACTTTCAAATGCCACAAAGCAAAACAGAC...AACTGACAAGGCACCCTTTACAAACCCAGAAGATGTAACTGTACAACGCCTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR CAA 90 bp | CTGTCTTTAAGAAAGCAGTTAAAATCATTTCAGTGGCTTTCTTGCTaGACGGGTAGCAAAAGTTTGCCCAGATACATGGCAATGTTGACA | + |
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Preference number: 2 (lower is better) Translates to: LSLRKQLKSFQWLSC*TGSKSLPRYMAMLT Trigger: TGTCAACATTGCCATGTATCTGGGCAAACTTTTGCTACCCGTCAAGCAAGAAAGCCACTGAAATGATTTTAACTGCTTTCTTAAAGACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR-3UTR GCA 90 bp | TTTAAACTATTAATAAAGCACAGAGTATTTCAGGTCTGGATTTCCCTCCAGATGATGCAAGAAGCATCCTaGAAGAAGCATCCTGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: FKLLIKHRVFQVWISLQMMQEAS*KKHPAR Trigger: TCTTGCAGGATGCTTCTTGCAGGATGCTTCTTGCAT...CATCTGGAGGGAAATCCAGACCTGAAATACTCTGTGCTTTATTAATAGTTTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR-3UTR GCA 90 bp | TTTAAACTATTAATAAAGCACAGAGTATTTCAGGTCTGGATTTCCCTCCAGATGCGGGTAGCAAAAGTTTaGCCAGATACATGGCAATGT | + |
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Preference number: 2 (lower is better) Translates to: FKLLIKHRVFQVWISLQMRVAKV*PDTWQC Trigger: ACATTGCCATGTATCTGGGCAAACTTTTGCTACCCG...CATCTGGAGGGAAATCCAGACCTGAAATACTCTGTGCTTTATTAATAGTTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR CCA 72 bp | GGTCTGGATTTCCCTCCAGATGGAGTGTGCTCCCCATaGATGCGACTGATCTCACGCTCACTGGCCTCCACT | + |
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Preference number: 3 (lower is better) Translates to: GLDFPPDGVCSP*MRLISRSLAST Trigger: AGTGGAGGCCAGTGAGCGTGAGATCAGTCGCATCCATGGGGAGCACACTCCATCTGGAGGGAAATCCAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR GCA 72 bp | AGTATTTCAGGTCTGGATTTCCCTCCAGATGGAGTGTaGTCCCCATGGATGCGACTGATCTCACGCTCACTG | + |
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Preference number: 3 (lower is better) Translates to: SISGLDFPPDGV*SPWMRLISRSL Trigger: CAGTGAGCGTGAGATCAGTCGCATCCATGGGGAGCACACTCCATCTGGAGGGAAATCCAGACCTGAAATACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR CCA 72 bp | AGCACAGAGTATTTCAGGTCTGGATTTCCCTCCAGATaGAGTGTGCTCCCCATGGATGCGACTGATCTCACG | + |
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Preference number: 3 (lower is better) Translates to: STEYFRSGFPSR*SVLPMDATDLT Trigger: CGTGAGATCAGTCGCATCCATGGGGAGCACACTCCATCTGGAGGGAAATCCAGACCTGAAATACTCTGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR TCA 72 bp | CTCAGCAAAGACGTGAAATCAGGAAGGACACGACTCTaGGTAGGAGATGGGACCGAAATAAAAGAAGCCGTG | + |
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Preference number: 3 (lower is better) Translates to: LSKDVKSGRTRL*VGDGTEIKEAV Trigger: CACGGCTTCTTTTATTTCGGTCCCATCTCCTACTCAGAGTCGTGTCCTTCCTGATTTCACGTCTTTGCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR-3UTR CAA 90 bp | AAAGCCCTTGACCTCAGGCACTCTGAAAGAATGTCCTCTACAGCTACAGGCAAGCTTGGCTTTCTTTGGTaGAGCTTCATCCTAATCGAT | + |
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Preference number: 3 (lower is better) Translates to: KALDLRHSERMSSTATGKLGFLW*SFILID Trigger: ATCGATTAGGATGAAGCTCAACCAAAGAAAGCCAAG...CTTGCCTGTAGCTGTAGAGGACATTCTTTCAGAGTGCCTGAGGTCAAGGGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR-3UTR CAA 90 bp | AAAGCCCTTGACCTCAGGCACTCTGAAAGAATGTCCTCTACAGCTACAGGCAAGTCTGTCTGTTTTGCTTaGTGGCATTTGAAAGTGTCG | + |
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Preference number: 3 (lower is better) Translates to: KALDLRHSERMSSTATGKSVCFA*WHLKVS Trigger: CGACACTTTCAAATGCCACAAAGCAAAACAGACAGA...CTTGCCTGTAGCTGTAGAGGACATTCTTTCAGAGTGCCTGAGGTCAAGGGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR-3UTR CAA 90 bp | AGCACAGAGTATTTCAGGTCTGGATTTCCCTCCAGATGGAGTGTGCTCCCCATGGTCTGGGTTTGTTTGTaGATACTGTCTTTAAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: STEYFRSGFPSRWSVLPMVWVCL*ILSLRK Trigger: CTTTCTTAAAGACAGTATCAACAAACAAACCCAGAC...CATGGGGAGCACACTCCATCTGGAGGGAAATCCAGACCTGAAATACTCTGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR-3UTR CAA 90 bp | GCAAGGCGTTGTACAGTTACATCTTCTGGGTTTGTAAAGGGTGCCTTGTCAGTTCAAAGTTTAAAGCCCTaGACCTCAGGCACTCTGAAA | + |
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Preference number: 3 (lower is better) Translates to: ARRCTVTSSGFVKGALSVQSLKP*TSGTLK Trigger: TTTCAGAGTGCCTGAGGTCAAGGGCTTTAAACTTTG...AACTGACAAGGCACCCTTTACAAACCCAGAAGATGTAACTGTACAACGCCTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR TCA 72 bp | TCTCACGCTCACTGGCCTCCACTTCATCAGAATAAGTaGTGCTTTCTTAGGTCAGTCTGGGTTTGTTTGTTG | + |
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Preference number: 3 (lower is better) Translates to: SHAHWPPLHQNK*CFLRSVWVCLL Trigger: CAACAAACAAACCCAGACTGACCTAAGAAAGCATCACTTATTCTGATGAAGTGGAGGCCAGTGAGCGTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR TCA 72 bp | TGGGCCCCCATTGCAAGTAGGTTCAGCATGGCCAAGTaGATTTACTCTCCTGTGTACAAAATGACAAGAACT | + |
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Preference number: 3 (lower is better) Translates to: WAPIASRFSMAK*IYSPVYKMTRT Trigger: AGTTCTTGTCATTTTGTACACAGGAGAGTAAATTCACTTGGCCATGCTGAACCTACTTGCAATGGGGGCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR CCA 72 bp | AGTAGGAGATGGGACCGAAATAAAAGAAGCCGTGTGTaGCTTTTCCAGTCACTAAATATGGAAGCCAGAACG | + |
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Preference number: 3 (lower is better) Translates to: SRRWDRNKRSRV*LFQSLNMEART Trigger: CGTTCTGGCTTCCATATTTAGTGACTGGAAAAGCCACACACGGCTTCTTTTATTTCGGTCCCATCTCCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR TCA 72 bp | TTTCTGTCCCTGGAATACAGTCTTTCCCTTGTTACGTaGTTCCTCTCGTTAACAGAGTCGCCCAAAACAAAC | + |
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Preference number: 3 (lower is better) Translates to: FLSLEYSLSLVT*FLSLTESPKTN Trigger: GTTTGTTTTGGGCGACTCTGTTAACGAGAGGAATCACGTAACAAGGGAAAGACTGTATTCCAGGGACAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR TCA 72 bp | GCATGGCCAAGTGAATTTACTCTCCTGTGTACAAAATaGCAAGAACTGTGCTGTGGTCTGACATTTGGTTCT | + |
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Preference number: 3 (lower is better) Translates to: AWPSEFTLLCTK*QELCCGLTFGS Trigger: AGAACCAAATGTCAGACCACAGCACAGTTCTTGTCATTTTGTACACAGGAGAGTAAATTCACTTGGCCATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR TCA 72 bp | AAACAGACAACGACCTATTTTTCTTTCCATCCCTTGTaGCTTCCTCTGTGTTGTTCACCGGTCCTGTTTTCT | + |
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Preference number: 3 (lower is better) Translates to: KQTTTYFSFHPL*LPLCCSPVLFS Trigger: AGAAAACAGGACCGGTGAACAACACAGAGGAAGTCACAAGGGATGGAAAGAAAAATAGGTCGTTGTCTGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR CCA 72 bp | TTTAAACTATTAATAAAGCACAGAGTATTTCAGGTCTaGATTTCCCTCCAGATGGAGTGTGCTCCCCATGGA | + |
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Preference number: 3 (lower is better) Translates to: FKLLIKHRVFQV*ISLQMECAPHG Trigger: TCCATGGGGAGCACACTCCATCTGGAGGGAAATCCAGACCTGAAATACTCTGTGCTTTATTAATAGTTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR TCA 72 bp | AGTGTTACTTTTGCACAATTGTGTGATGTGCATGGATaGGGAAACAGACAACGACCTATTTTTCTTTCCATC | + |
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Preference number: 3 (lower is better) Translates to: SVTFAQLCDVHG*GNRQRPIFLSI Trigger: GATGGAAAGAAAAATAGGTCGTTGTCTGTTTCCTCATCCATGCACATCACACAATTGTGCAAAAGTAACACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR CCA 72 bp | TACTCTCCTGTGTACAAAATGACAAGAACTGTGCTGTaGTCTGACATTTGGTTCTCTTCCTATAGAATTTCT | + |
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Preference number: 3 (lower is better) Translates to: YSPVYKMTRTVL*SDIWFSSYRIS Trigger: AGAAATTCTATAGGAAGAGAACCAAATGTCAGACCACAGCACAGTTCTTGTCATTTTGTACACAGGAGAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR TCA 72 bp | TACTATGGAGTAGAAGGAGTTGGCTCACTAGCACAGTaGCTTAATGTTGCTTTCACCAGTATTTATACAAAA | + |
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Preference number: 3 (lower is better) Translates to: YYGVEGVGSLAQ*LNVAFTSIYTK Trigger: TTTTGTATAAATACTGGTGAAAGCAACATTAAGTCACTGTGCTAGTGAGCCAACTCCTTCTACTCCATAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| 3UTR GCA 72 bp | ATTCATTTAGTGTTACTTTTGCACAATTGTGTGATGTaGATGGATGAGGAAACAGACAACGACCTATTTTTC | + |
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Preference number: 3 (lower is better) Translates to: IHLVLLLHNCVM*MDEETDNDLFF Trigger: GAAAAATAGGTCGTTGTCTGTTTCCTCATCCATGCACATCACACAATTGTGCAAAAGTAACACTAAATGAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| CDS-3UTR TCA 90 bp | AAGAATGTCCTCTACAGCTACAGGCAAGTACACAGAGTCACCACACAGAGTCCCGGAGGCAGGCGCAGATaGTCCCAGGGCCCCGACGGA | + |
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Preference number: 4 (lower is better) Translates to: KNVLYSYRQVHRVTTQSPGGRRR*SQGPDG Trigger: TCCGTCGGGGCCCTGGGATCATCTGCGCCTGCCTCC...GGGACTCTGTGTGGTGACTCTGTGTACTTGCCTGTAGCTGTAGAGGACATTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| CDS-3UTR GCA 90 bp | GGAGCACTAGATGAGCAGCTACACAGTGTCTGTAGCAGGCGGGATGTGCTCTGTGACAGCTTATCCGGCTaGAGCCAGGGCCACAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GALDEQLHSVCSRRDVLCDSLSG*SQGHSS Trigger: GGAGCTGTGGCCCTGGCTGCAGCCGGATAAGCTGTC...ACAGAGCACATCCCGCCTGCTACAGACACTGTGTAGCTGCTCATCTAGTGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| CDS-3UTR TCA 90 bp | TCCCGTGGCTGTGATTCAGTCATTCACTTACAGCCTCCTGATCTTGGACTGTATGGAGGCAGGCGCAGATaGTCCCAGGGCCCCGACGGA | + |
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Preference number: 4 (lower is better) Translates to: SRGCDSVIHLQPPDLGLYGGRRR*SQGPDG Trigger: TCCGTCGGGGCCCTGGGATCATCTGCGCCTGCCTCC...ATACAGTCCAAGATCAGGAGGCTGTAAGTGAATGACTGAATCACAGCCACGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234519.2 |
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| CDS-3UTR CCA 90 bp | AAGTCCCGTGGCTGTGATTCAGTCATTCACTTACAGCCTCCTGATCTTGGACTGGGTAGCGCCCACTCCTaGCCGCCGGGAGGCCACAAT | + |
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Preference number: 4 (lower is better) Translates to: KSRGCDSVIHLQPPDLGLGSAHS*PPGGHN Trigger: ATTGTGGCCTCCCGGCGGCCAGGAGTGGGCGCTACC...CAGTCCAAGATCAGGAGGCTGTAAGTGAATGACTGAATCACAGCCACGGGACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234519.2 |
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| CDS-3UTR CCA 90 bp | GTCTATCTGTCTGTCTGTTTTGCTTTGTGGCATTTGAAAGTGTCGACTCCTTTTGGGAGGTCCCCACCGTaGGCTCCTGTGCGGGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: VYLSVCFALWHLKVSTPFGRSPP*APVRGL Trigger: CAACCCCCGCACAGGAGCCCACGGTGGGGACCTCCC...AAAAGGAGTCGACACTTTCAAATGCCACAAAGCAAAACAGACAGACAGATAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| CDS-3UTR CCA 90 bp | GCACATATTTATGGACATAATAGCCATCCTCTACTTAGGGCACAGGAGTACAATGGGAGGTCCCCACCGTaGGCTCCTGTGCGGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AHIYGHNSHPLLRAQEYNGRSPP*APVRGL Trigger: CAACCCCCGCACAGGAGCCCACGGTGGGGACCTCCC...ATTGTACTCCTGTGCCCTAAGTAGAGGATGGCTATTATGTCCATAAATATGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234519.2 |
||
| CDS-3UTR CCA 90 bp | TTAGCCCAGAAGATGAGTCTGCAAAGTTTAAAGCCCTTGACCTCAGGCACTCTGGCGTTCCTAGTGTCCTaGGCCAGAGGACCCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: LAQKMSLQSLKPLTSGTLAFLVS*ARGPHT Trigger: AGTGTGGGGTCCTCTGGCCCAGGACACTAGGAACGC...CAGAGTGCCTGAGGTCAAGGGCTTTAAACTTTGCAGACTCATCTTCTGGGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR TCA 90 bp | AAGAATGTCCTCTACAGCTACAGGCAAGTACACAGAGTCACCACACAGAGTCCCCCTTCTAAGCCAACCTaGAGCACCTGGCCAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KNVLYSYRQVHRVTTQSPPSKPT*STWPEK Trigger: CTTCTCTGGCCAGGTGCTTCAGGTTGGCTTAGAAGG...GGGACTCTGTGTGGTGACTCTGTGTACTTGCCTGTAGCTGTAGAGGACATTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR TCA 90 bp | GTGCTCCCCATGGATGCGACTGATCTCACGCTCACTGGCCTCCACTTCATCAGAACTGTTGCTGGCAAATaGGTTACATTCTGCTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: VLPMDATDLTLTGLHFIRTVAGK*VTFCSP Trigger: AGGTGAGCAGAATGTAACTCATTTGCCAGCAACAGT...TCTGATGAAGTGGAGGCCAGTGAGCGTGAGATCAGTCGCATCCATGGGGAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR TCA 90 bp | AGCACAGAGTATTTCAGGTCTGGATTTCCCTCCAGATGGAGTGTGCTCCCCATGACCGCGTTTTCAATCTaGGGAGGGATTGCTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: STEYFRSGFPSRWSVLPMTAFSI*GGIAVS Trigger: AGAGACAGCAATCCCTCCTCAGATTGAAAACGCGGT...CATGGGGAGCACACTCCATCTGGAGGGAAATCCAGACCTGAAATACTCTGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR GCA 90 bp | GACAGTAACAGTCAAGTAGGAGTCAATGGTGCAGGCACTGCAGGAGAGAGAAGTTTTACTGCAGCTCATTaGGTGAACAAGACGGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: DSNSQVGVNGAGTAGERSFTAAH*VNKTAA Trigger: CGCCGCCGTCTTGTTCACGCAATGAGCTGCAGTAAA...ACTTCTCTCTCCTGCAGTGCCTGCACCATTGACTCCTACTTGACTGTTACTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR CCA 90 bp | TATCTGTCTGTCTGTTTTGCTTTGTGGCATTTGAAAGTGTCGACTCCTTTTTCAGGTAGCGCCCACTCCTaGCCGCCGGGAGGCCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: YLSVCFALWHLKVSTPFSGSAHS*PPGGHN Trigger: ATTGTGGCCTCCCGGCGGCCAGGAGTGGGCGCTACC...TGAAAAAGGAGTCGACACTTTCAAATGCCACAAAGCAAAACAGACAGACAGATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR CCA 90 bp | ACGACTCTGAGTAGGAGATGGGACCGAAATAAAAGAAGCCGTGTGTGGCTTTTCCCAGCTGGGGCATATTaGAAAGAGCCGCATACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TTLSRRWDRNKRSRVWLFPAGAY*KEPHTQ Trigger: CTGGGTATGCGGCTCTTTCCAATATGCCCCAGCTGG...GAAAAGCCACACACGGCTTCTTTTATTTCGGTCCCATCTCCTACTCAGAGTCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR GCA 90 bp | GCACATATTTATGGACATAATAGCCATCCTCTACTTAGGGCACAGGAGTACAATGACAGCTTATCCGGCTaGAGCCAGGGCCACAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AHIYGHNSHPLLRAQEYNDSLSG*SQGHSS Trigger: GGAGCTGTGGCCCTGGCTGCAGCCGGATAAGCTGTC...ATTGTACTCCTGTGCCCTAAGTAGAGGATGGCTATTATGTCCATAAATATGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234519.2 |
||
| CDS-3UTR GCA 90 bp | TTAGCCCAGAAGATGAGTCTGCAAAGTTTAAAGCCCTTGACCTCAGGCACTCTGTTTCCAAACCACTGGTaGCCAACCTCATGGGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: LAQKMSLQSLKPLTSGTLFPNHW*PTSWAM Trigger: CATCGCCCATGAGGTTGGGCACCAGTGGTTTGGAAA...CAGAGTGCCTGAGGTCAAGGGCTTTAAACTTTGCAGACTCATCTTCTGGGCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR GCA 90 bp | GTGCTCCCCATGGATGCGACTGATCTCACGCTCACTGGCCTCCACTTCATCAGAGGATCCTTTTCAAGTTaGTCACTTAACTTCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLPMDATDLTLTGLHFIRGSFSS*SLNFFQ Trigger: CTGGAAGAAGTTAAGTGAGCAACTTGAAAAGGATCC...TCTGATGAAGTGGAGGCCAGTGAGCGTGAGATCAGTCGCATCCATGGGGAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR GCA 90 bp | AAAGCCCTTGACCTCAGGCACTCTGAAAGAATGTCCTCTACAGCTACAGGCAAGACCACAACCCTCTGGTaGTCTTCCAACACAGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: KALDLRHSERMSSTATGKTTTLW*SSNTVL Trigger: CAGTACTGTGTTGGAAGAGCACCAGAGGGTTGTGGT...CTTGCCTGTAGCTGTAGAGGACATTCTTTCAGAGTGCCTGAGGTCAAGGGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR CCA 90 bp | ACGACTCTGAGTAGGAGATGGGACCGAAATAAAAGAAGCCGTGTGTGGCTTTTCCAGATCATAGTGAAGTaGGACAAGCCAGGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TTLSRRWDRNKRSRVWLFQIIVK*DKPGRQ Trigger: CTGCCTCCCTGGCTTGTCCCACTTCACTATGATCTG...GAAAAGCCACACACGGCTTCTTTTATTTCGGTCCCATCTCCTACTCAGAGTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR CCA 90 bp | ATTCAGTCATTCACTTACAGCCTCCTGATCTTGGACTGTATCAGACAGACTGTAGCGTTCCTAGTGTCCTaGGCCAGAGGACCCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: IQSFTYSLLILDCIRQTVAFLVS*ARGPHT Trigger: AGTGTGGGGTCCTCTGGCCCAGGACACTAGGAACGC...TACAGTCTGTCTGATACAGTCCAAGATCAGGAGGCTGTAAGTGAATGACTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234519.2 |
||
| CDS-3UTR CCA 90 bp | GACAGTAACAGTCAAGTAGGAGTCAATGGTGCAGGCACTGCAGGAGAGAGAAGTTGTTCCACCAGCTCATaGTCACCAGGTTTCCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: DSNSQVGVNGAGTAGERSCSTSS*SPGFQT Trigger: GGTTTGGAAACCTGGTGACCATGAGCTGGTGGAACA...ACTTCTCTCTCCTGCAGTGCCTGCACCATTGACTCCTACTTGACTGTTACTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR CCA 90 bp | AAGTCCCGTGGCTGTGATTCAGTCATTCACTTACAGCCTCCTGATCTTGGACTGTGTTCCACCAGCTCATaGTCACCAGGTTTCCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: KSRGCDSVIHLQPPDLGLCSTSS*SPGFQT Trigger: GGTTTGGAAACCTGGTGACCATGAGCTGGTGGAACA...CAGTCCAAGATCAGGAGGCTGTAAGTGAATGACTGAATCACAGCCACGGGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234519.2 |
||
| CDS-3UTR TCA 90 bp | GAAAAGTCCCGTGGCTGTGATTCAGTCATTCACTTACAGCCTCCTGATCTTGGACAGATCCTCCAGAAATaGGAAGATGGGGCCTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: EKSRGCDSVIHLQPPDLGQILQK*EDGACD Trigger: ATCACAGGCCCCATCTTCTCATTTCTGGAGGATCTG...TCCAAGATCAGGAGGCTGTAAGTGAATGACTGAATCACAGCCACGGGACTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234519.2 |
||
| CDS-3UTR TCA 90 bp | AGCACAGAGTATTTCAGGTCTGGATTTCCCTCCAGATGGAGTGTGCTCCCCATGGTCACTGTCAGAATCTaGAAGTTTCATCCCAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: STEYFRSGFPSRWSVLPMVTVRI*KFHPRE Trigger: TTCCCTGGGATGAAACTTTCAGATTCTGACAGTGAC...CATGGGGAGCACACTCCATCTGGAGGGAAATCCAGACCTGAAATACTCTGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR GCA 90 bp | GCTGTGATTCAGTCATTCACTTACAGCCTCCTGATCTTGGACTGTATCAGACAGTTTCCAAACCACTGGTaGCCAACCTCATGGGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: AVIQSFTYSLLILDCIRQFPNHW*PTSWAM Trigger: CATCGCCCATGAGGTTGGGCACCAGTGGTTTGGAAA...CTGTCTGATACAGTCCAAGATCAGGAGGCTGTAAGTGAATGACTGAATCACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234519.2 |
||
| CDS-3UTR GCA 90 bp | AAGTCCCGTGGCTGTGATTCAGTCATTCACTTACAGCCTCCTGATCTTGGACTGGCGTTGATAAACAAGTaGGGGCTCAGGAAACTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KSRGCDSVIHLQPPDLGLALINK*GLRKLA Trigger: TGCTAGTTTCCTGAGCCCGCACTTGTTTATCAACGC...CAGTCCAAGATCAGGAGGCTGTAAGTGAATGACTGAATCACAGCCACGGGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234519.2 |
||
| CDS-3UTR TCA 90 bp | AGCACAGAGTATTTCAGGTCTGGATTTCCCTCCAGATGGAGTGTGCTCCCCATGTCACCTATAGCCATTTaGATATGTCTCCACAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: STEYFRSGFPSRWSVLPMSPIAI*ICLHRS Trigger: TGACCTGTGGAGACATATTCAAATGGCTATAGGTGA...CATGGGGAGCACACTCCATCTGGAGGGAAATCCAGACCTGAAATACTCTGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR GCA 90 bp | AAGTCCCGTGGCTGTGATTCAGTCATTCACTTACAGCCTCCTGATCTTGGACTGAAACAAGGGAAAACATaGCTGGCAAATGTTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSRGCDSVIHLQPPDLGLKQGKT*LANVGS Trigger: GGAGCCAACATTTGCCAGGCATGTTTTCCCTTGTTT...CAGTCCAAGATCAGGAGGCTGTAAGTGAATGACTGAATCACAGCCACGGGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234519.2 |
||
| CDS-3UTR GCA 90 bp | GCTGTGATTCAGTCATTCACTTACAGCCTCCTGATCTTGGACTGTATCAGACAGCAAGCATCCAGGCCATaGATGCTCCCTTCTTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: AVIQSFTYSLLILDCIRQQASRP*MLPSCK Trigger: CTTACAAGAAGGGAGCATGCATGGCCTGGATGCTTG...CTGTCTGATACAGTCCAAGATCAGGAGGCTGTAAGTGAATGACTGAATCACAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234519.2 |
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| CDS-3UTR CCA 90 bp | GCCATCCTCTACTTAGGGCACAGGAGTACAATGAAGACTAAAGAAACCATTCATCCAGCTGGGGCATATTaGAAAGAGCCGCATACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AILYLGHRSTMKTKETIHPAGAY*KEPHTQ Trigger: CTGGGTATGCGGCTCTTTCCAATATGCCCCAGCTGG...ATGAATGGTTTCTTTAGTCTTCATTGTACTCCTGTGCCCTAAGTAGAGGATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234519.2 |
||
| CDS-3UTR CCA 90 bp | GCAAGGCGTTGTACAGTTACATCTTCTGGGTTTGTAAAGGGTGCCTTGTCAGTTAGTTCTCTGGACAGCTaGAGACAGTCTTCAAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: ARRCTVTSSGFVKGALSVSSLDS*RQSSRP Trigger: GGGTCTTGAAGACTGTCTCCAGCTGTCCAGAGAACT...AACTGACAAGGCACCCTTTACAAACCCAGAAGATGTAACTGTACAACGCCTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| CDS-3UTR TCA 90 bp | GCACATATTTATGGACATAATAGCCATCCTCTACTTAGGGCACAGGAGTACAATCCTTCTAAGCCAACCTaGAGCACCTGGCCAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AHIYGHNSHPLLRAQEYNPSKPT*STWPEK Trigger: CTTCTCTGGCCAGGTGCTTCAGGTTGGCTTAGAAGG...ATTGTACTCCTGTGCCCTAAGTAGAGGATGGCTATTATGTCCATAAATATGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234519.2 |
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| CDS-3UTR TCA 90 bp | ATCGATCTCCTTTATTTCTGGCTTCTGTGTCTTTACATCGCCTTAGGTTCCCACCAGATCCTCCAGAAATaGGAAGATGGGGCCTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: IDLLYFWLLCLYIALGSHQILQK*EDGACD Trigger: ATCACAGGCCCCATCTTCTCATTTCTGGAGGATCTG...GTGGGAACCTAAGGCGATGTAAAGACACAGAAGCCAGAAATAAAGGAGATCGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| CDS-3UTR TCA 90 bp | AAGTCCCGTGGCTGTGATTCAGTCATTCACTTACAGCCTCCTGATCTTGGACTGTTTCGCTTGTTTCTGTaGAATTTTCCACTGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSRGCDSVIHLQPPDLGLFRLFL*NFPLQW Trigger: CCACTGCAGTGGAAAATTTCACAGAAACAAGCGAAA...CAGTCCAAGATCAGGAGGCTGTAAGTGAATGACTGAATCACAGCCACGGGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234519.2 |
||
| CDS-3UTR GCA 90 bp | AGGAATGCACAGCCATATGCAAGGCGTTGTACAGTTACATCTTCTGGGTTTGTACAAGCATCCAGGCCATaGATGCTCCCTTCTTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: RNAQPYARRCTVTSSGFVQASRP*MLPSCK Trigger: CTTACAAGAAGGGAGCATGCATGGCCTGGATGCTTG...TACAAACCCAGAAGATGTAACTGTACAACGCCTTGCATATGGCTGTGCATTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| CDS-3UTR CCA 90 bp | GGCTGTGATTCAGTCATTCACTTACAGCCTCCTGATCTTGGACTGTATCAGACAACCTGGCCAGAGAAGTaGAAACTCAGCTCATATCTG | + |
|
Preference number: 4 (lower is better) Translates to: GCDSVIHLQPPDLGLYQTTWPEK*KLSSYL Trigger: CAGATATGAGCTGAGTTTCCACTTCTCTGGCCAGGT...TGTCTGATACAGTCCAAGATCAGGAGGCTGTAAGTGAATGACTGAATCACAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234519.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCCCTTGACCTCAGGCACTCTGAAAGAATGTCCTCTACAGCTACAGGCAAGAAGGGAAAACATGCCTaGCAAATGTTGGCTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: KALDLRHSERMSSTATGKKGKHA*QMLAPF Trigger: AAATGGAGCCAACATTTGCCAGGCATGTTTTCCCTT...CTTGCCTGTAGCTGTAGAGGACATTCTTTCAGAGTGCCTGAGGTCAAGGGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR TCA 90 bp | GCAAGGCGTTGTACAGTTACATCTTCTGGGTTTGTAAAGGGTGCCTTGTCAGTTATGCAAAGCCTTCATTaGGCCAGATATTGTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: ARRCTVTSSGFVKGALSVMQSLH*ARYCST Trigger: GGTGGAACAATATCTGGCTCAATGAAGGCTTTGCAT...AACTGACAAGGCACCCTTTACAAACCCAGAAGATGTAACTGTACAACGCCTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| CDS-3UTR TCA 90 bp | GGCTGTGATTCAGTCATTCACTTACAGCCTCCTGATCTTGGACTGTATCAGACAATGCAAAGCCTTCATTaGGCCAGATATTGTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GCDSVIHLQPPDLGLYQTMQSLH*ARYCST Trigger: GGTGGAACAATATCTGGCTCAATGAAGGCTTTGCAT...TGTCTGATACAGTCCAAGATCAGGAGGCTGTAAGTGAATGACTGAATCACAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234519.2 |
||
| CDS-3UTR GCA 90 bp | ATCGATCTCCTTTATTTCTGGCTTCTGTGTCTTTACATCGCCTTAGGTTCCCACGCGTTGATAAACAAGTaGGGGCTCAGGAAACTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IDLLYFWLLCLYIALGSHALINK*GLRKLA Trigger: TGCTAGTTTCCTGAGCCCGCACTTGTTTATCAACGC...GTGGGAACCTAAGGCGATGTAAAGACACAGAAGCCAGAAATAAAGGAGATCGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR CCA 90 bp | ATCGATCTCCTTTATTTCTGGCTTCTGTGTCTTTACATCGCCTTAGGTTCCCACATGCCTGGCAAATGTTaGCTCCATTTGAGTCGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: IDLLYFWLLCLYIALGSHMPGKC*LHLSRY Trigger: GTAGCGACTCAAATGGAGCCAACATTTGCCAGGCAT...GTGGGAACCTAAGGCGATGTAAAGACACAGAAGCCAGAAATAAAGGAGATCGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR CCA 90 bp | AAAGCACAGAGTATTTCAGGTCTGGATTTCCCTCCAGATGGAGTGTGCTCCCCACTTCGGCAATGTATTTaGTTAAATCAAGTGCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KAQSISGLDFPPDGVCSPLRQCI*LNQVPS Trigger: AGACGGCACTTGATTTAACCAAATACATTGCCGAAG...TGGGGAGCACACTCCATCTGGAGGGAAATCCAGACCTGAAATACTCTGTGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| 3UTR CAA 72 bp | TTAGCCCAGAAGATGAGTCTGCAAAGTTTAAAGCCCTaGACCTCAGGCACTCTGAAAGAATGTCCTCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: LAQKMSLQSLKP*TSGTLKECPLQ Trigger: CTGTAGAGGACATTCTTTCAGAGTGCCTGAGGTCAAGGGCTTTAAACTTTGCAGACTCATCTTCTGGGCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR TCA 90 bp | AAGGCGTTGTACAGTTACATCTTCTGGGTTTGTAAAGGGTGCCTTGTCAGTTATAGAAGATGGGGCCTGTaGTGTTTGCAGCAAAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: KALYSYIFWVCKGCLVSYRRWGL*CLQQSL Trigger: TAGACTTTGCTGCAAACATCACAGGCCCCATCTTCT...ATAACTGACAAGGCACCCTTTACAAACCCAGAAGATGTAACTGTACAACGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR TCA 90 bp | GCCATCCTCTACTTAGGGCACAGGAGTACAATGAAGACTAAAGAAACCATTCATAGAAGATGGGGCCTGTaGTGTTTGCAGCAAAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: AILYLGHRSTMKTKETIHRRWGL*CLQQSL Trigger: TAGACTTTGCTGCAAACATCACAGGCCCCATCTTCT...ATGAATGGTTTCTTTAGTCTTCATTGTACTCCTGTGCCCTAAGTAGAGGATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234519.2 |
||
| CDS-3UTR TCA 90 bp | GAAAAGTCCCGTGGCTGTGATTCAGTCATTCACTTACAGCCTCCTGATCTTGGACAGCAAGAAAGTGTCTaGAAGGGACAATTACCATTT | + |
|
Preference number: 4 (lower is better) Translates to: EKSRGCDSVIHLQPPDLGQQESV*KGQLPF Trigger: AAATGGTAATTGTCCCTTTCAGACACTTTCTTGCTG...TCCAAGATCAGGAGGCTGTAAGTGAATGACTGAATCACAGCCACGGGACTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234519.2 |
||
| CDS-3UTR GCA 90 bp | ATCGATCTCCTTTATTTCTGGCTTCTGTGTCTTTACATCGCCTTAGGTTCCCACTTCAGAAGGAAGCTATaGAGCAACAATCTCGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: IDLLYFWLLCLYIALGSHFRRKL*SNNLEE Trigger: CTCCTCGAGATTGTTGCTGCATAGCTTCCTTCTGAA...GTGGGAACCTAAGGCGATGTAAAGACACAGAAGCCAGAAATAAAGGAGATCGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR GCA 90 bp | AGGAATGCACAGCCATATGCAAGGCGTTGTACAGTTACATCTTCTGGGTTTGTAAAACAAGGGAAAACATaGCTGGCAAATGTTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RNAQPYARRCTVTSSGFVKQGKT*LANVGS Trigger: GGAGCCAACATTTGCCAGGCATGTTTTCCCTTGTTT...TACAAACCCAGAAGATGTAACTGTACAACGCCTTGCATATGGCTGTGCATTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR GCA 90 bp | AAGTCCCGTGGCTGTGATTCAGTCATTCACTTACAGCCTCCTGATCTTGGACTGAAGTTCAAAATAAGATaGAAAGCCTTCATTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KSRGCDSVIHLQPPDLGLKFKIR*KAFIEP Trigger: TGGCTCAATGAAGGCTTTGCATCTTATTTTGAACTT...CAGTCCAAGATCAGGAGGCTGTAAGTGAATGACTGAATCACAGCCACGGGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234519.2 |
||
| CDS-3UTR CCA 90 bp | GCACATATTTATGGACATAATAGCCATCCTCTACTTAGGGCACAGGAGTACAATATGCCTGGCAAATGTTaGCTCCATTTGAGTCGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: AHIYGHNSHPLLRAQEYNMPGKC*LHLSRY Trigger: GTAGCGACTCAAATGGAGCCAACATTTGCCAGGCAT...ATTGTACTCCTGTGCCCTAAGTAGAGGATGGCTATTATGTCCATAAATATGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234519.2 |
||
| CDS-3UTR GCA 90 bp | GCACATATTTATGGACATAATAGCCATCCTCTACTTAGGGCACAGGAGTACAATTTCAGAAGGAAGCTATaGAGCAACAATCTCGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AHIYGHNSHPLLRAQEYNFRRKL*SNNLEE Trigger: CTCCTCGAGATTGTTGCTGCATAGCTTCCTTCTGAA...ATTGTACTCCTGTGCCCTAAGTAGAGGATGGCTATTATGTCCATAAATATGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234519.2 |
||
| CDS-3UTR GCA 90 bp | TTAGCCCAGAAGATGAGTCTGCAAAGTTTAAAGCCCTTGACCTCAGGCACTCTGAAGTTCAAAATAAGATaGAAAGCCTTCATTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LAQKMSLQSLKPLTSGTLKFKIR*KAFIEP Trigger: TGGCTCAATGAAGGCTTTGCATCTTATTTTGAACTT...CAGAGTGCCTGAGGTCAAGGGCTTTAAACTTTGCAGACTCATCTTCTGGGCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR GCA 90 bp | TATCTGTCTGTCTGTTTTGCTTTGTGGCATTTGAAAGTGTCGACTCCTTTTTCAACAGTACTGAAGAAGTaGTGCAACTCTGTGACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YLSVCFALWHLKVSTPFSTVLKK*CNSVTC Trigger: GCAGGTCACAGAGTTGCAGCACTTCTTCAGTACTGT...TGAAAAAGGAGTCGACACTTTCAAATGCCACAAAGCAAAACAGACAGACAGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR CCA 90 bp | ATTCAGTCATTCACTTACAGCCTCCTGATCTTGGACTGTATCAGACAGACTGTAAAGGGAAAACATGCCTaGCAAATGTTGGCTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: IQSFTYSLLILDCIRQTVKGKHA*QMLAPF Trigger: AAATGGAGCCAACATTTGCCAGGCATGTTTTCCCTT...TACAGTCTGTCTGATACAGTCCAAGATCAGGAGGCTGTAAGTGAATGACTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234519.2 |
||
| 3UTR CAA 72 bp | AGAAAGCAGTTAAAATCATTTCAGTGGCTTTCTTGCTaGACGGGTAGCAAAAGTTTGCCCAGATACATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RKQLKSFQWLSC*TGSKSLPRYMA Trigger: TGCCATGTATCTGGGCAAACTTTTGCTACCCGTCAAGCAAGAAAGCCACTGAAATGATTTTAACTGCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR GCA 90 bp | TATCTGTCTGTCTGTTTTGCTTTGTGGCATTTGAAAGTGTCGACTCCTTTTTCAAACTCAGCTCATATCTaGTACCTGGCTCCAAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: YLSVCFALWHLKVSTPFSNSAHI*YLAPRI Trigger: AATCCTTGGAGCCAGGTAGCAGATATGAGCTGAGTT...TGAAAAAGGAGTCGACACTTTCAAATGCCACAAAGCAAAACAGACAGACAGATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR GCA 90 bp | AAGGCGTTGTACAGTTACATCTTCTGGGTTTGTAAAGGGTGCCTTGTCAGTTATAAAATTGGAGGAAACTaGAGTGATGGCATACTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KALYSYIFWVCKGCLVSYKIGGN*SDGILH Trigger: ATGGAGTATGCCATCACTGCAGTTTCCTCCAATTTT...ATAACTGACAAGGCACCCTTTACAAACCCAGAAGATGTAACTGTACAACGCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR TCA 90 bp | TATCTGTCTGTCTGTTTTGCTTTGTGGCATTTGAAAGTGTCGACTCCTTTTTCATTTCGCTTGTTTCTGTaGAATTTTCCACTGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YLSVCFALWHLKVSTPFSFRLFL*NFPLQW Trigger: CCACTGCAGTGGAAAATTTCACAGAAACAAGCGAAA...TGAAAAAGGAGTCGACACTTTCAAATGCCACAAAGCAAAACAGACAGACAGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR CCA 90 bp | TTTAAACTATTAATAAAGCACAGAGTATTTCAGGTCTGGATTTCCCTCCAGATGACCTGGCCAGAGAAGTaGAAACTCAGCTCATATCTG | + |
|
Preference number: 4 (lower is better) Translates to: FKLLIKHRVFQVWISLQMTWPEK*KLSSYL Trigger: CAGATATGAGCTGAGTTTCCACTTCTCTGGCCAGGT...CATCTGGAGGGAAATCCAGACCTGAAATACTCTGTGCTTTATTAATAGTTTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR TCA 90 bp | TTTAAACTATTAATAAAGCACAGAGTATTTCAGGTCTGGATTTCCCTCCAGATGGCCGCATACCCAGGATaGTGGATAACTGTAATATTA | + |
|
Preference number: 4 (lower is better) Translates to: FKLLIKHRVFQVWISLQMAAYPG*WITVIL Trigger: TAATATTACAGTTATCCATCATCCTGGGTATGCGGC...CATCTGGAGGGAAATCCAGACCTGAAATACTCTGTGCTTTATTAATAGTTTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR CAA 90 bp | AAGAATGTCCTCTACAGCTACAGGCAAGTACACAGAGTCACCACACAGAGTCCCACCTGGCTCCAAGGATaGGCCCAGATCCAGCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: KNVLYSYRQVHRVTTQSPTWLQG*AQIQHH Trigger: GTGGTGCTGGATCTGGGCCAATCCTTGGAGCCAGGT...GGGACTCTGTGTGGTGACTCTGTGTACTTGCCTGTAGCTGTAGAGGACATTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS TCA 90 bp | ATAAATCTGTTAAGTATCCACGGGTCTTTACTGCAGCTCATTGCGTaGACAAGACGGCGGCGGCGGCTCTCGTCCTCTTCCTCGGTCGTA | + |
|
Preference number: 5 (lower is better) Translates to: INLLSIHGSLLQLIA*TRRRRRLSSSSSVV Trigger: TACGACCGAGGAAGAGGACGAGAGCCGCCGCCGCCGTCTTGTTCACGCAATGAGCTGCAGTAAAGACCCGTGGATACTTAACAGATTTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS GCA 90 bp | CAACCTGAAGCACCTGGCCAGAGAAGTGGAAACTCAGCTCATATCTaGTACCTGGCTCCAAGGATTGGCCCAGATCCAGCACCACGAATT | + |
|
Preference number: 5 (lower is better) Translates to: QPEAPGQRSGNSAHI*YLAPRIGPDPAPRI Trigger: AATTCGTGGTGCTGGATCTGGGCCAATCCTTGGAGCCAGGTAGCAGATATGAGCTGAGTTTCCACTTCTCTGGCCAGGTGCTTCAGGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025358.4 ENSMUST00000234519.2 |
||
| CDS CCA 90 bp | CGGGCCCAGACACGTATCTCCTTGCCTCTCTCAGTTCTGCTGATGTaGTCTAAGTCACACACAACAAGGGCAACAAGGTACGTTGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: RAQTRISLPLSVLLM*SKSHTTRATRYVGM Trigger: CATGCCAACGTACCTTGTTGCCCTTGTTGTGTGTGACTTAGACCACATCAGCAGAACTGAGAGAGGCAAGGAGATACGTGTCTGGGCCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025358.4 ENSMUST00000234519.2 |
||
| CDS-3UTR CAA 90 bp | GAAAAGTCCCGTGGCTGTGATTCAGTCATTCACTTACAGCCTCCTGATCTTGGAACCTGGCTCCAAGGATaGGCCCAGATCCAGCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: EKSRGCDSVIHLQPPDLGTWLQG*AQIQHH Trigger: GTGGTGCTGGATCTGGGCCAATCCTTGGAGCCAGGT...TCCAAGATCAGGAGGCTGTAAGTGAATGACTGAATCACAGCCACGGGACTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234519.2 |
||
| CDS CCA 90 bp | CAGCTCATGGTCACCAGGTTTCCAAACCACTGGTGCCCAACCTCATaGGCGATGATGCTCAAGATCATAGCTCTTTTCTCCGTCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QLMVTRFPNHWCPTS*AMMLKIIALFSVSS Trigger: TGAGCTGACGGAGAAAAGAGCTATGATCTTGAGCATCATCGCCCATGAGGTTGGGCACCAGTGGTTTGGAAACCTGGTGACCATGAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025358.4 ENSMUST00000234519.2 |
||
| CDS-3UTR CAA 90 bp | TTAGCCCAGAAGATGAGTCTGCAAAGTTTAAAGCCCTTGACCTCAGGCACTCTGCAATCTGAGGAGGGATaGCTGTCTCTGGATGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LAQKMSLQSLKPLTSGTLQSEEG*LSLDEP Trigger: CGGCTCATCCAGAGACAGCAATCCCTCCTCAGATTG...CAGAGTGCCTGAGGTCAAGGGCTTTAAACTTTGCAGACTCATCTTCTGGGCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS CCA 90 bp | CACACAACAAGGGCAACAAGGTACGTTGGCATGCGGGGTGTGGTATaGAAGGTAGTGACAGTCCATCTGCTTCCATTCACATCGATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HTTRATRYVGMRGVV*KVVTVHLLPFTSIL Trigger: AAGAATCGATGTGAATGGAAGCAGATGGACTGTCACTACCTTCCATACCACACCCCGCATGCCAACGTACCTTGTTGCCCTTGTTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025358.4 ENSMUST00000234519.2 |
||
| CDS-3UTR CAA 90 bp | ACGACTCTGAGTAGGAGATGGGACCGAAATAAAAGAAGCCGTGTGTGGCTTTTCCAGACACGTATCTCCTaGCCTCTCTCAGTTCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TTLSRRWDRNKRSRVWLFQTRIS*PLSVLL Trigger: CAGCAGAACTGAGAGAGGCAAGGAGATACGTGTCTG...GAAAAGCCACACACGGCTTCTTTTATTTCGGTCCCATCTCCTACTCAGAGTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR CAA 90 bp | AAGAATGTCCTCTACAGCTACAGGCAAGTACACAGAGTCACCACACAGAGTCCCCCATTAGAAAGTCCTTaGCAATGTACCGGCCAACTT | + |
|
Preference number: 5 (lower is better) Translates to: KNVLYSYRQVHRVTTQSPPLESP*QCTGQL Trigger: AAGTTGGCCGGTACATTGCAAAGGACTTTCTAATGG...GGGACTCTGTGTGGTGACTCTGTGTACTTGCCTGTAGCTGTAGAGGACATTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR CAA 90 bp | ACGACTCTGAGTAGGAGATGGGACCGAAATAAAAGAAGCCGTGTGTGGCTTTTCACCCCACACTTCCACTaGCTTGTAATTCAGAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TTLSRRWDRNKRSRVWLFTPHFH*LVIQKE Trigger: TTCCTTCTGAATTACAAGCAAGTGGAAGTGTGGGGT...GAAAAGCCACACACGGCTTCTTTTATTTCGGTCCCATCTCCTACTCAGAGTCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS GCA 90 bp | GTCAAAGAGTCTGTTTATTTCGCTTGTTTCTGTGAAATTTTCCACTaGAGTGGACACAGCTCTAGACTCCAGGGCATGATCTTCTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: VKESVYFACFCEIFH*SGHSSRLQGMIFSE Trigger: CTCGGAGAAGATCATGCCCTGGAGTCTAGAGCTGTGTCCACTGCAGTGGAAAATTTCACAGAAACAAGCGAAATAAACAGACTCTTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025358.4 ENSMUST00000234519.2 |
||
| CDS-3UTR CAA 90 bp | GGCTGTGATTCAGTCATTCACTTACAGCCTCCTGATCTTGGACTGTATCAGACAACCCCACACTTCCACTaGCTTGTAATTCAGAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GCDSVIHLQPPDLGLYQTTPHFH*LVIQKE Trigger: TTCCTTCTGAATTACAAGCAAGTGGAAGTGTGGGGT...TGTCTGATACAGTCCAAGATCAGGAGGCTGTAAGTGAATGACTGAATCACAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234519.2 |
||
| CDS-3UTR CAA 90 bp | GCAAGGCGTTGTACAGTTACATCTTCTGGGTTTGTAAAGGGTGCCTTGTCAGTTGATGCAAAGCCTTCATaGAGCCAGATATTGTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ARRCTVTSSGFVKGALSVDAKPS*SQILFH Trigger: GTGGAACAATATCTGGCTCAATGAAGGCTTTGCATC...AACTGACAAGGCACCCTTTACAAACCCAGAAGATGTAACTGTACAACGCCTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR CAA 90 bp | AAAGCACAGAGTATTTCAGGTCTGGATTTCCCTCCAGATGGAGTGTGCTCCCCATTATGCCTTTTACTGTaGCTGGCAAATGAGTTACAT | + |
|
Preference number: 5 (lower is better) Translates to: KAQSISGLDFPPDGVCSPLCLLL*LANELH Trigger: ATGTAACTCATTTGCCAGCAACAGTAAAAGGCATAA...TGGGGAGCACACTCCATCTGGAGGGAAATCCAGACCTGAAATACTCTGTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR CAA 90 bp | AAAGCACAGAGTATTTCAGGTCTGGATTTCCCTCCAGATGGAGTGTGCTCCCCATTTGTTTCACTAAAATaGGAGGAAACTGCAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: KAQSISGLDFPPDGVCSPFVSLK*EETAVM Trigger: CATCACTGCAGTTTCCTCCAATTTTAGTGAAACAAA...TGGGGAGCACACTCCATCTGGAGGGAAATCCAGACCTGAAATACTCTGTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR CAA 90 bp | GCAAGGCGTTGTACAGTTACATCTTCTGGGTTTGTAAAGGGTGCCTTGTCAGTTCTGGCAATTCTCTTCTaGTTTTGCAGATTCTTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: ARRCTVTSSGFVKGALSVLAILF*FCRFFV Trigger: GACGAAGAATCTGCAAAACAAGAAGAGAATTGCCAG...AACTGACAAGGCACCCTTTACAAACCCAGAAGATGTAACTGTACAACGCCTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR CAA 90 bp | GCTGTGATTCAGTCATTCACTTACAGCCTCCTGATCTTGGACTGTATCAGACAGAGGGACAATTACCATTaGAATATGTCTCCACAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AVIQSFTYSLLILDCIRQRDNYH*NMSPQV Trigger: GACCTGTGGAGACATATTCAAATGGTAATTGTCCCT...CTGTCTGATACAGTCCAAGATCAGGAGGCTGTAAGTGAATGACTGAATCACAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234519.2 |
||
| CDS TCA 90 bp | TTCTTGTTTTGCAGATTCTTCGTCTTCATTGCCTGTAATTTGGCTTaGACCACAACCCTCTGGTGCTCTTCCAACACAGTACTGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FLFCRFFVFIACNLA*TTTLWCSSNTVLKK Trigger: CTTCTTCAGTACTGTGTTGGAAGAGCACCAGAGGGTTGTGGTTCAAGCCAAATTACAGGCAATGAAGACGAAGAATCTGCAAAACAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR CAA 90 bp | GCACATATTTATGGACATAATAGCCATCCTCTACTTAGGGCACAGGAGTACAATGATGCAAAGCCTTCATaGAGCCAGATATTGTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: AHIYGHNSHPLLRAQEYNDAKPS*SQILFH Trigger: GTGGAACAATATCTGGCTCAATGAAGGCTTTGCATC...ATTGTACTCCTGTGCCCTAAGTAGAGGATGGCTATTATGTCCATAAATATGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234519.2 |
||
| CDS-3UTR CAA 90 bp | AAGGCGTTGTACAGTTACATCTTCTGGGTTTGTAAAGGGTGCCTTGTCAGTTATAAGATAAAACGGCTCTaGTTTAACGACGCCAGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: KALYSYIFWVCKGCLVSYKIKRL*FNDASR Trigger: TCTACTGGCGTCGTTAAACAAGAGCCGTTTTATCTT...ATAACTGACAAGGCACCCTTTACAAACCCAGAAGATGTAACTGTACAACGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS-3UTR CAA 90 bp | ATCGATCTCCTTTATTTCTGGCTTCTGTGTCTTTACATCGCCTTAGGTTCCCACGGCCAACTTCAGATGTaGCTACAACAACTATTATAT | + |
|
Preference number: 5 (lower is better) Translates to: IDLLYFWLLCLYIALGSHGQLQM*LQQLLY Trigger: ATATAATAGTTGTTGTAGCAACATCTGAAGTTGGCC...GTGGGAACCTAAGGCGATGTAAAGACACAGAAGCCAGAAATAAAGGAGATCGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS GCA 90 bp | AGTCACTGTCAGAATCTGAAAGTTTCATCCCAGGGAACATCATGTTaGTTTTATCTAGCCAGACTAAAGGTTGTGGGATTCCATTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SHCQNLKVSSQGTSC*FYLARLKVVGFHFS Trigger: TGAAAAATGGAATCCCACAACCTTTAGTCTGGCTAGATAAAAGCAACATGATGTTCCCTGGGATGAAACTTTCAGATTCTGACAGTGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS GCA 90 bp | TGCTACAACAACTATTATATTTGTTTCACTAAAATTGGAGGAAACTaGAGTGATGGCATACTCCATAAATCTGTTAAGTATCCACGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: CYNNYYICFTKIGGN*SDGILHKSVKYPRV Trigger: GACCCGTGGATACTTAACAGATTTATGGAGTATGCCATCACTGCAGTTTCCTCCAATTTTAGTGAAACAAATATAATAGTTGTTGTAGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS TCA 90 bp | TATAGCCATTTGAATATGTCTCCACAGGTCATCTTGCTCAGCATTTaGGTAAGAAAATGTCTCCAAATAAGACTTAAGTGCGTTGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: YSHLNMSPQVILLSI*VRKCLQIRLKCVDK Trigger: TTTATCAACGCACTTAAGTCTTATTTGGAGACATTTTCTTACTCAAATGCTGAGCAAGATGACCTGTGGAGACATATTCAAATGGCTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS CCA 72 bp | GTGGGCTCCTGTGCGGGGGTTGGTAGCGCCCACTCCTaGCCGCCGGGAGGCCACAATGAGGTGTTCTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: VGSCAGVGSAHS*PPGGHNEVFFT Trigger: GGTGAAGAACACCTCATTGTGGCCTCCCGGCGGCCAGGAGTGGGCGCTACCAACCCCCGCACAGGAGCCCAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025358.4 ENSMUST00000234519.2 |
||
| CDS TCA 72 bp | TTCACCCGGGAGTTACCCTGCTCCGAAGGCTGGACGTaGGCGCAGCTGCCATACAAGGAAGCCAGAGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: FTRELPCSEGWT*AQLPYKEARAT Trigger: AGTGGCTCTGGCTTCCTTGTATGGCAGCTGCGCTCACGTCCAGCCTTCGGAGCAGGGTAACTCCCGGGTGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025358.4 ENSMUST00000234519.2 |
||
| CDS CAA 90 bp | TCTGCTACCTGGCTCCAAGGATTGGCCCAGATCCAGCACCACGAATaGCATGTCCGGCGCAAACCACACTTTCTCCACCTGCACGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SATWLQGLAQIQHHE*HVRRKPHFLHLHAA Trigger: GGCCGCGTGCAGGTGGAGAAAGTGTGGTTTGCGCCGGACATGCAATTCGTGGTGCTGGATCTGGGCCAATCCTTGGAGCCAGGTAGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025358.4 ENSMUST00000234519.2 |
||
| CDS GCA 72 bp | GGCTCCAAGGATTGGCCCAGATCCAGCACCACGAATTaGATGTCCGGCGCAAACCACACTTTCTCCACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GSKDWPRSSTTN*MSGANHTFSTC Trigger: GCAGGTGGAGAAAGTGTGGTTTGCGCCGGACATGCAATTCGTGGTGCTGGATCTGGGCCAATCCTTGGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025358.4 ENSMUST00000234519.2 |
||
| CDS CAA 72 bp | TGGCTCCAAGGATTGGCCCAGATCCAGCACCACGAATaGCATGTCCGGCGCAAACCACACTTTCTCCACCTG | + |
|
Preference number: 6 (lower is better) Translates to: WLQGLAQIQHHE*HVRRKPHFLHL Trigger: CAGGTGGAGAAAGTGTGGTTTGCGCCGGACATGCAATTCGTGGTGCTGGATCTGGGCCAATCCTTGGAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025358.4 ENSMUST00000234519.2 |
||
| CDS GCA 72 bp | GCACCTGGCCAGAGAAGTGGAAACTCAGCTCATATCTaGTACCTGGCTCCAAGGATTGGCCCAGATCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: APGQRSGNSAHI*YLAPRIGPDPA Trigger: TGCTGGATCTGGGCCAATCCTTGGAGCCAGGTAGCAGATATGAGCTGAGTTTCCACTTCTCTGGCCAGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025358.4 ENSMUST00000234519.2 |
||
| CDS GCA 72 bp | AGTCCCAGTCCTTATCACTCCCCAGAGCAACGGCACTaGAGAGGACCGCGTTTTCAATCTGAGGAGGGATTG | + |
|
Preference number: 6 (lower is better) Translates to: SPSPYHSPEQRH*RGPRFQSEEGL Trigger: CAATCCCTCCTCAGATTGAAAACGCGGTCCTCTGCAGTGCCGTTGCTCTGGGGAGTGATAAGGACTGGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
||
| CDS CCA 72 bp | GCCAGAGAAGTGGAAACTCAGCTCATATCTGCTACCTaGCTCCAAGGATTGGCCCAGATCCAGCACCACGAA | + |
|
Preference number: 6 (lower is better) Translates to: AREVETQLISAT*LQGLAQIQHHE Trigger: TTCGTGGTGCTGGATCTGGGCCAATCCTTGGAGCCAGGTAGCAGATATGAGCTGAGTTTCCACTTCTCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025358.4 ENSMUST00000234519.2 |
||
| CDS CAA 72 bp | GAAACTCAGCTCATATCTGCTACCTGGCTCCAAGGATaGGCCCAGATCCAGCACCACGAATTGCATGTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: ETQLISATWLQG*AQIQHHELHVR Trigger: CCGGACATGCAATTCGTGGTGCTGGATCTGGGCCAATCCTTGGAGCCAGGTAGCAGATATGAGCTGAGTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025358.4 ENSMUST00000234519.2 |
||
| CDS CAA 90 bp | AGAGAAGTGGAAACTCAGCTCATATCTGCTACCTGGCTCCAAGGATaGGCCCAGATCCAGCACCACGAATTGCATGTCCGGCGCAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: REVETQLISATWLQG*AQIQHHELHVRRKP Trigger: TGGTTTGCGCCGGACATGCAATTCGTGGTGCTGGATCTGGGCCAATCCTTGGAGCCAGGTAGCAGATATGAGCTGAGTTTCCACTTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025358.4 ENSMUST00000234519.2 |
||
| CDS CCA 72 bp | AGGGCAACAAGGTACGTTGGCATGCGGGGTGTGGTATaGAAGGTAGTGACAGTCCATCTGCTTCCATTCACA | + |
|
Preference number: 6 (lower is better) Translates to: RATRYVGMRGVV*KVVTVHLLPFT Trigger: TGTGAATGGAAGCAGATGGACTGTCACTACCTTCCATACCACACCCCGCATGCCAACGTACCTTGTTGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025358.4 ENSMUST00000234519.2 |
||
| CDS CAA 90 bp | AGTGGCGTTCCTAGTGTCCTGGGCCAGAGGACCCCACACTTCCACTaGCTTGTAATTCAGAAGGAAGCTATGCAGCAACAATCTCGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SGVPSVLGQRTPHFH*LVIQKEAMQQQSRG Trigger: TCCTCGAGATTGTTGCTGCATAGCTTCCTTCTGAATTACAAGCAAGTGGAAGTGTGGGGTCCTCTGGCCCAGGACACTAGGAACGCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025358.4 ENSMUST00000234519.2 |
||
| CDS CCA 72 bp | GTCACCAGGTTTCCAAACCACTGGTGCCCAACCTCATaGGCGATGATGCTCAAGATCATAGCTCTTTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VTRFPNHWCPTS*AMMLKIIALFS Trigger: GGAGAAAAGAGCTATGATCTTGAGCATCATCGCCCATGAGGTTGGGCACCAGTGGTTTGGAAACCTGGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025358.4 ENSMUST00000234519.2 |
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| CDS CAA 72 bp | CCTAGTGTCCTGGGCCAGAGGACCCCACACTTCCACTaGCTTGTAATTCAGAAGGAAGCTATGCAGCAACAA | + |
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Preference number: 6 (lower is better) Translates to: PSVLGQRTPHFH*LVIQKEAMQQQ Trigger: TTGTTGCTGCATAGCTTCCTTCTGAATTACAAGCAAGTGGAAGTGTGGGGTCCTCTGGCCCAGGACACTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025358.4 ENSMUST00000234519.2 |
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| CDS TCA 72 bp | CAAGGGAAAACATGCCTGGCAAATGTTGGCTCCATTTaGGTCGCTACCAGGGCTCTGAGCTCATCTTCATCA | + |
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Preference number: 6 (lower is better) Translates to: QGKTCLANVGSI*VATRALSSSSS Trigger: TGATGAAGATGAGCTCAGAGCCCTGGTAGCGACTCAAATGGAGCCAACATTTGCCAGGCATGTTTTCCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025358.4 ENSMUST00000234519.2 |
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| CDS TCA 72 bp | GTCCATCTGCTTCCATTCACATCGATTCTTTCAGACTaGCCCAGCTGGGGCATATTGGAAAGAGCCGCATAC | + |
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Preference number: 6 (lower is better) Translates to: VHLLPFTSILSD*PSWGILERAAY Trigger: GTATGCGGCTCTTTCCAATATGCCCCAGCTGGGTCAGTCTGAAAGAATCGATGTGAATGGAAGCAGATGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025358.4 ENSMUST00000234519.2 |
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| CDS TCA 72 bp | CCCAGACACGTATCTCCTTGCCTCTCTCAGTTCTGCTaGTGTGGTCTAAGTCACACACAACAAGGGCAACAA | + |
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Preference number: 6 (lower is better) Translates to: PRHVSPCLSQFC*CGLSHTQQGQQ Trigger: TTGTTGCCCTTGTTGTGTGTGACTTAGACCACATCAGCAGAACTGAGAGAGGCAAGGAGATACGTGTCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025358.4 ENSMUST00000234519.2 |
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| CDS GCA 72 bp | TTGTTTTTAGTCAAGGCGAAAGCGTCGCTCACCAGCTaGAGCCTGTTAATGACAGGAATGGCCTTAGGATCC | + |
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Preference number: 6 (lower is better) Translates to: LFLVKAKASLTS*SLLMTGMALGS Trigger: GGATCCTAAGGCCATTCCTGTCATTAACAGGCTGCAGCTGGTGAGCGACGCTTTCGCCTTGACTAAAAACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| CDS CAA 72 bp | ACAAGGGAAAACATGCCTGGCAAATGTTGGCTCCATTaGAGTCGCTACCAGGGCTCTGAGCTCATCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: TRENMPGKCWLH*SRYQGSELIFI Trigger: GATGAAGATGAGCTCAGAGCCCTGGTAGCGACTCAAATGGAGCCAACATTTGCCAGGCATGTTTTCCCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025358.4 ENSMUST00000234519.2 |
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| CDS CCA 72 bp | ACACGTATCTCCTTGCCTCTCTCAGTTCTGCTGATGTaGTCTAAGTCACACACAACAAGGGCAACAAGGTAC | + |
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Preference number: 6 (lower is better) Translates to: TRISLPLSVLLM*SKSHTTRATRY Trigger: GTACCTTGTTGCCCTTGTTGTGTGTGACTTAGACCACATCAGCAGAACTGAGAGAGGCAAGGAGATACGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025358.4 ENSMUST00000234519.2 |
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| CDS CAA 90 bp | GCATCCAGCCAATCCATTCCATACCTTTCAGTCACAGCTACCCAGTaGTCCATTAGAAAGTCCTTTGCAATGTACCGGCCAACTTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: ASSQSIPYLSVTATQ*SIRKSFAMYRPTSD Trigger: ATCTGAAGTTGGCCGGTACATTGCAAAGGACTTTCTAATGGACAACTGGGTAGCTGTGACTGAAAGGTATGGAATGGATTGGCTGGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| CDS CAA 90 bp | CCACCCTGGCAATTCTCTTCTTGTTTTGCAGATTCTTCGTCTTCATaGCCTGTAATTTGGCTTGAACCACAACCCTCTGGTGCTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: PPWQFSSCFADSSSS*PVIWLEPQPSGALP Trigger: TGGAAGAGCACCAGAGGGTTGTGGTTCAAGCCAAATTACAGGCAATGAAGACGAAGAATCTGCAAAACAAGAAGAGAATTGCCAGGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| CDS TCA 72 bp | CAAATGTTGGCTCCATTTGAGTCGCTACCAGGGCTCTaGGCTCATCTTCATCATGGTAGAGGTTCAGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: QMLAPFESLPGL*AHLHHGRGSER Trigger: TCTTTCTGAACCTCTACCATGATGAAGATGAGCTCAGAGCCCTGGTAGCGACTCAAATGGAGCCAACATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025358.4 ENSMUST00000234519.2 |
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| CDS TCA 72 bp | TCCACTGCAGTGGACACAGCTCTAGACTCCAGGGCATaGTCTTCTCCGAGAATTCCATGTAAAACGGTAAAA | + |
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Preference number: 6 (lower is better) Translates to: STAVDTALDSRA*SSPRIPCKTVK Trigger: TTTTACCGTTTTACATGGAATTCTCGGAGAAGATCATGCCCTGGAGTCTAGAGCTGTGTCCACTGCAGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025358.4 ENSMUST00000234519.2 |
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| CDS CAA 72 bp | CAGTCACAGCTACCCAGTTGTCCATTAGAAAGTCCTTaGCAATGTACCGGCCAACTTCAGATGTTGCTACAA | + |
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Preference number: 6 (lower is better) Translates to: QSQLPSCPLESP*QCTGQLQMLLQ Trigger: TTGTAGCAACATCTGAAGTTGGCCGGTACATTGCAAAGGACTTTCTAATGGACAACTGGGTAGCTGTGACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| CDS GCA 72 bp | TCTGTTTATTTCGCTTGTTTCTGTGAAATTTTCCACTaGAGTGGACACAGCTCTAGACTCCAGGGCATGATC | + |
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Preference number: 6 (lower is better) Translates to: SVYFACFCEIFH*SGHSSRLQGMI Trigger: GATCATGCCCTGGAGTCTAGAGCTGTGTCCACTGCAGTGGAAAATTTCACAGAAACAAGCGAAATAAACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025358.4 ENSMUST00000234519.2 |
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| CDS CCA 72 bp | TGTTTTGCAGATTCTTCGTCTTCATTGCCTGTAATTTaGCTTGAACCACAACCCTCTGGTGCTCTTCCAACA | + |
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Preference number: 6 (lower is better) Translates to: CFADSSSSLPVI*LEPQPSGALPT Trigger: TGTTGGAAGAGCACCAGAGGGTTGTGGTTCAAGCCAAATTACAGGCAATGAAGACGAAGAATCTGCAAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| CDS CAA 72 bp | TTCCGAAGCCACTCAACCACCCTGGCAATTCTCTTCTaGTTTTGCAGATTCTTCGTCTTCATTGCCTGTAAT | + |
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Preference number: 6 (lower is better) Translates to: FRSHSTTLAILF*FCRFFVFIACN Trigger: ATTACAGGCAATGAAGACGAAGAATCTGCAAAACAAGAAGAGAATTGCCAGGGTGGTTGAGTGGCTTCGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| CDS TCA 72 bp | AAGCCGATAACTGATATTAAACAGATCCTCCAGAAATaGGAAGATGGGGCCTGTGATGTTTGCAGCAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: KPITDIKQILQK*EDGACDVCSKV Trigger: GACTTTGCTGCAAACATCACAGGCCCCATCTTCTCATTTCTGGAGGATCTGTTTAATATCAGTTATCGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025358.4 ENSMUST00000234519.2 |
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| CDS CAA 90 bp | CATACCTTTCAGTCACAGCTACCCAGTTGTCCATTAGAAAGTCCTTaGCAATGTACCGGCCAACTTCAGATGTTGCTACAACAACTATTA | + |
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Preference number: 6 (lower is better) Translates to: HTFQSQLPSCPLESP*QCTGQLQMLLQQLL Trigger: TAATAGTTGTTGTAGCAACATCTGAAGTTGGCCGGTACATTGCAAAGGACTTTCTAATGGACAACTGGGTAGCTGTGACTGAAAGGTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| CDS CCA 72 bp | ACCACACCAGGATCTCATCTTCTTCGGCAATGTATTTaGTTAAATCAAGTGCCGTCTCGATCTCAATGTAAT | + |
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Preference number: 6 (lower is better) Translates to: TTPGSHLLRQCI*LNQVPSRSQCN Trigger: ATTACATTGAGATCGAGACGGCACTTGATTTAACCAAATACATTGCCGAAGAAGATGAGATCCTGGTGTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| CDS CAA 72 bp | CAATTCTCTTCTTGTTTTGCAGATTCTTCGTCTTCATaGCCTGTAATTTGGCTTGAACCACAACCCTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: QFSSCFADSSSS*PVIWLEPQPSG Trigger: ACCAGAGGGTTGTGGTTCAAGCCAAATTACAGGCAATGAAGACGAAGAATCTGCAAAACAAGAAGAGAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| CDS CAA 90 bp | CAGTCACTGTCAGAATCTGAAAGTTTCATCCCAGGGAACATCATGTaGCTTTTATCTAGCCAGACTAAAGGTTGTGGGATTCCATTTTTC | + |
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Preference number: 6 (lower is better) Translates to: QSLSESESFIPGNIM*LLSSQTKGCGIPFF Trigger: GAAAAATGGAATCCCACAACCTTTAGTCTGGCTAGATAAAAGCAACATGATGTTCCCTGGGATGAAACTTTCAGATTCTGACAGTGACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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| CDS CAA 72 bp | TCAGAATCTGAAAGTTTCATCCCAGGGAACATCATGTaGCTTTTATCTAGCCAGACTAAAGGTTGTGGGATT | + |
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Preference number: 6 (lower is better) Translates to: SESESFIPGNIM*LLSSQTKGCGI Trigger: AATCCCACAACCTTTAGTCTGGCTAGATAAAAGCAACATGATGTTCCCTGGGATGAAACTTTCAGATTCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025358.4 |
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