RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LUZP4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000079387

Ensembl transcript IDs: ENSMUST00000101185.10, ENSMUST00000163338.2

Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp GTATGGGTTCCAGAGCTTAAGGATTATGGTAAATTACACAGTTTCTCTAACATTAACCAGGATTCATCTTaGTCATCTCCTTGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: VWVPELKDYGKLHSFSNINQDSS*SSPCSF
Trigger: AAAAGAACAAGGAGATGAGCAAGATGAATCCTGGTT...AATGTTAGAGAAACTGTGTAATTTACCATAATCCTTAAGCTCTGGAACCCATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000101185.10
ENSMUST00000163338.2
3UTR-3UTR GCA 90 bp AAGTCACTCACATTGATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGAACCAGGATTCATCTTaGTCATCTCCTTGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: KSLTLIAFVHKTFLSLVWNQDSS*SSPCSF
Trigger: AAAAGAACAAGGAGATGAGCAAGATGAATCCTGGTT...CCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAATCAATGTGAGTGACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000101185.10
ENSMUST00000163338.2
3UTR-3UTR CAA 90 bp TTGATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTCCAGAGCTTCTTAAAACAACCCCATaGAAACCAGGATTCATCTTG +
Preference number: 3 (lower is better)
Translates to: LIAFVHKTFLSLVWVPELLKTTP*KPGFIL
Trigger: CAAGATGAATCCTGGTTTCAATGGGGTTGTTTTAAG...AAGCTCTGGAACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000101185.10
ENSMUST00000163338.2
3UTR-3UTR CAA 90 bp GTATGGGTTCCAGAGCTTAAGGATTATGGTAAATTACACAGTTTCTCTAACATTAAACCAGGATTCATCTaGCTCATCTCCTTGTTCTTT +
Preference number: 3 (lower is better)
Translates to: VWVPELKDYGKLHSFSNIKPGFI*LISLFF
Trigger: AAAGAACAAGGAGATGAGCAAGATGAATCCTGGTTT...AATGTTAGAGAAACTGTGTAATTTACCATAATCCTTAAGCTCTGGAACCCATAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000101185.10
ENSMUST00000163338.2
3UTR-3UTR CAA 90 bp AAGTCACTCACATTGATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGCTTAAAACAACCCCATaGAAACCAGGATTCATCTTG +
Preference number: 3 (lower is better)
Translates to: KSLTLIAFVHKTFLSLVWLKTTP*KPGFIL
Trigger: CAAGATGAATCCTGGTTTCAATGGGGTTGTTTTAAG...CCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAATCAATGTGAGTGACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000101185.10
ENSMUST00000163338.2
3UTR-3UTR CAA 90 bp TTATCACTTGTATGGGTTCCAGAGCTTAAGGATTATGGTAAATTACACAGTTTCATCTTGCTCATCTCCTaGTTCTTTTATGCAAACAGT +
Preference number: 3 (lower is better)
Translates to: LSLVWVPELKDYGKLHSFILLIS*FFYANS
Trigger: ACTGTTTGCATAAAAGAACAAGGAGATGAGCAAGAT...GAAACTGTGTAATTTACCATAATCCTTAAGCTCTGGAACCCATACAAGTGATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000101185.10
ENSMUST00000163338.2
3UTR CCA 72 bp ATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATaGGTTCCAGAGCTTAAGGATTATGGTAAATTACAC +
Preference number: 3 (lower is better)
Translates to: IAFVHKTFLSLV*VPELKDYGKLH
Trigger: GTGTAATTTACCATAATCCTTAAGCTCTGGAACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000101185.10
ENSMUST00000163338.2
CDS-3UTR GCA 90 bp CCCGAAGGAAAAGGCAGTTTAGTCTTCAGGTCTTCTCATTCTACTATTGTTCATCACTCTCTTCAGCACTaGTGTAGCCGTCTTCTAGCC +
Preference number: 4 (lower is better)
Translates to: PEGKGSLVFRSSHSTIVHHSLQH*CSRLLA
Trigger: GGCTAGAAGACGGCTACAGCAGTGCTGAAGAGAGTG...ATGAACAATAGTAGAATGAGAAGACCTGAAGACTAAACTGCCTTTTCCTTCGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000101185.10
ENSMUST00000163338.2
CDS-3UTR GCA 90 bp TTGATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTCCAGAGCTTAGTGGCCATGAGATCTaGCAATGTGGTGGTCATGAG +
Preference number: 4 (lower is better)
Translates to: LIAFVHKTFLSLVWVPELSGHEI*QCGGHE
Trigger: CTCATGACCACCACATTGGCAGATCTCATGGCCACT...AAGCTCTGGAACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000101185.10
ENSMUST00000163338.2
CDS-3UTR GCA 90 bp AAGTCACTCACATTGATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGCACTCTCTTCAGCACTaGTGTAGCCGTCTTCTAGCC +
Preference number: 4 (lower is better)
Translates to: KSLTLIAFVHKTFLSLVWHSLQH*CSRLLA
Trigger: GGCTAGAAGACGGCTACAGCAGTGCTGAAGAGAGTG...CCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAATCAATGTGAGTGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000101185.10
ENSMUST00000163338.2
CDS-3UTR GCA 90 bp TTATCACTTGTATGGGTTCCAGAGCTTAAGGATTATGGTAAATTACACAGTTTCAGTGGCCATGAGATCTaGCAATGTGGTGGTCATGAG +
Preference number: 4 (lower is better)
Translates to: LSLVWVPELKDYGKLHSFSGHEI*QCGGHE
Trigger: CTCATGACCACCACATTGGCAGATCTCATGGCCACT...GAAACTGTGTAATTTACCATAATCCTTAAGCTCTGGAACCCATACAAGTGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000101185.10
ENSMUST00000163338.2
CDS-3UTR GCA 90 bp TTGATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTCCAGAGCTTGTTATGAGCTCTCCTTaGATGGCCGTGATAAGCTCT +
Preference number: 4 (lower is better)
Translates to: LIAFVHKTFLSLVWVPELVMSSP*MAVISS
Trigger: AGAGCTTATCACGGCCATGCAAGGAGAGCTCATAAC...AAGCTCTGGAACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000101185.10
ENSMUST00000163338.2
CDS-3UTR GCA 90 bp TTATCACTTGTATGGGTTCCAGAGCTTAAGGATTATGGTAAATTACACAGTTTCATGTCCAGGGAAAAATaGTTGCCCTCTGGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: LSLVWVPELKDYGKLHSFMSREK*LPSGAF
Trigger: GAAAGCTCCAGAGGGCAAGCATTTTTCCCTGGACAT...GAAACTGTGTAATTTACCATAATCCTTAAGCTCTGGAACCCATACAAGTGATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000101185.10
ENSMUST00000163338.2
CDS-3UTR GCA 90 bp GTATGGGTTCCAGAGCTTAAGGATTATGGTAAATTACACAGTTTCTCTAACATTATGTCCAGGGAAAAATaGTTGCCCTCTGGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: VWVPELKDYGKLHSFSNIMSREK*LPSGAF
Trigger: GAAAGCTCCAGAGGGCAAGCATTTTTCCCTGGACAT...AATGTTAGAGAAACTGTGTAATTTACCATAATCCTTAAGCTCTGGAACCCATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000101185.10
ENSMUST00000163338.2
CDS GCA 90 bp AGCGACAGGTTAGTCTGTCCAAACTTTCATCACTCTCTTCAGCACTaGTGTAGCCGTCTTCTAGCCCTACATTCAGTTCAACTGTCTCAT +
Preference number: 5 (lower is better)
Translates to: SDRLVCPNFHHSLQH*CSRLLALHSVQLSH
Trigger: ATGAGACAGTTGAACTGAATGTAGGGCTAGAAGACGGCTACAGCAGTGCTGAAGAGAGTGATGAAAGTTTGGACAGACTAACCTGTCGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000101185.10
ENSMUST00000163338.2
CDS CCA 72 bp TCCCTCGCGGATGTCCAGGGAAAAATGCTTGCCCTCTaGAGCTTTCTGACTGTATGTCATTCTCCTCATTGT +
Preference number: 6 (lower is better)
Translates to: SLADVQGKMLAL*SFLTVCHSPHC
Trigger: ACAATGAGGAGAATGACATACAGTCAGAAAGCTCCAGAGGGCAAGCATTTTTCCCTGGACATCCGCGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000101185.10
ENSMUST00000163338.2
CDS GCA 72 bp GATTACGTGATCTTCTGGAATAGTGGCCATGAGATCTaGCAATGTGGTGGTCATGAGATTGGGAGAGGCCAT +
Preference number: 6 (lower is better)
Translates to: DYVIFWNSGHEI*QCGGHEIGRGH
Trigger: ATGGCCTCTCCCAATCTCATGACCACCACATTGGCAGATCTCATGGCCACTATTCCAGAAGATCACGTAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000101185.10
ENSMUST00000163338.2
CDS CAA 90 bp GCTCAGATCCTGGTGGTGATGCATCCCTTGGTCCATTTCTTCCTCTaGGACCATGGTATCTTTCTCTTTCATGAAGCATCCATGACTGGA +
Preference number: 6 (lower is better)
Translates to: AQILVVMHPLVHFFL*DHGIFLFHEASMTG
Trigger: TCCAGTCATGGATGCTTCATGAAAGAGAAAGATACCATGGTCCAAGAGGAAGAAATGGACCAAGGGATGCATCACCACCAGGATCTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000101185.10
ENSMUST00000163338.2
CDS GCA 72 bp TTAGTCTGTCCAAACTTTCATCACTCTCTTCAGCACTaGTGTAGCCGTCTTCTAGCCCTACATTCAGTTCAA +
Preference number: 6 (lower is better)
Translates to: LVCPNFHHSLQH*CSRLLALHSVQ
Trigger: TTGAACTGAATGTAGGGCTAGAAGACGGCTACAGCAGTGCTGAAGAGAGTGATGAAAGTTTGGACAGACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000101185.10
ENSMUST00000163338.2
CDS CAA 90 bp AATGCTTGCCCTCTGGAGCTTTCTGACTGTATGTCATTCTCCTCATaGTATTCTTCTTCAGAATTAGCAGCTTCTAGATATCTCAGCTGT +
Preference number: 6 (lower is better)
Translates to: NACPLELSDCMSFSS*YSSSELAASRYLSC
Trigger: ACAGCTGAGATATCTAGAAGCTGCTAATTCTGAAGAAGAATACAATGAGGAGAATGACATACAGTCAGAAAGCTCCAGAGGGCAAGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000101185.10
ENSMUST00000163338.2