Pregenerated sensors for LUZP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063297Ensembl transcript IDs: ENSMUST00000082373.8
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAAACTGAACTGGTACTTTTCAGTACTGTAGTGATGGTGAGTGGCTaGAATTCTCAGCCCTTGGGAAATAGATGCAGGAGGATAAAGAGC | + |
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Preference number: 1 (lower is better) Translates to: KTELVLFSTVVMVSG*NSQPLGNRCRRIKS Trigger: GCTCTTTATCCTCCTGCATCTATTTCCCAAGGGCTGAGAATTTCAGCCACTCACCATCACTACAGTACTGAAAAGTACCAGTTCAGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR GCA 90 bp | CAAGAGTGTGGACTTCCTGACTTCATCCGTTGGTCAGTTTTTATCTaGCAAGTGGTGTTTGAATATATTATCATTTTATGTCCATCTTTC | + |
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Preference number: 1 (lower is better) Translates to: QECGLPDFIRWSVFI*QVVFEYIIILCPSF Trigger: GAAAGATGGACATAAAATGATAATATATTCAAACACCACTTGGCAGATAAAAACTGACCAACGGATGAAGTCAGGAAGTCCACACTCTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR CCA 90 bp | TGTTATTTCATTAGAAAACATGGGGAAGTCCTCAACAGCAATCGATaGGCTGTGTGTAAACTCCAAGTTGTATTTCTTCACTTAACATTG | + |
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Preference number: 1 (lower is better) Translates to: CYFIRKHGEVLNSNR*AVCKLQVVFLHLTL Trigger: CAATGTTAAGTGAAGAAATACAACTTGGAGTTTACACACAGCCCATCGATTGCTGTTGAGGACTTCCCCATGTTTTCTAATGAAATAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR CCA 90 bp | TTCAAAGTATTTAACCAAGAGTGTGGACTTCCTGACTTCATCCGTTaGTCAGTTTTTATCTGCCAAGTGGTGTTTGAATATATTATCATT | + |
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Preference number: 1 (lower is better) Translates to: FKVFNQECGLPDFIR*SVFICQVVFEYIII Trigger: AATGATAATATATTCAAACACCACTTGGCAGATAAAAACTGACCAACGGATGAAGTCAGGAAGTCCACACTCTTGGTTAAATACTTTGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTCCTTAAAGGTGGTTAGAATAAAACCTCCTGCTCTTACAGTCTTTCTTTCAGTGATGGTGAGTGGCTaGAATTCTCAGCCCTTGGGA | + |
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Preference number: 2 (lower is better) Translates to: WSLKVVRIKPPALTVFLSVMVSG*NSQPLG Trigger: TCCCAAGGGCTGAGAATTTCAGCCACTCACCATCAC...TGAAAGAAAGACTGTAAGAGCAGGAGGTTTTATTCTAACCACCTTTAAGGACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTCCTTAAAGGTGGTTAGAATAAAACCTCCTGCTCTTACAGTCTTTCTTTCAAGAGTGTGGACTTCCTaGCTTCATCCGTTGGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: WSLKVVRIKPPALTVFLSRVWTS*LHPLVS Trigger: ACTGACCAACGGATGAAGTCAGGAAGTCCACACTCT...TGAAAGAAAGACTGTAAGAGCAGGAGGTTTTATTCTAACCACCTTTAAGGACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR-3UTR TCA 90 bp | CACCTTGTCCACCTAAAACAGCAAATGTCTGTTCCACAAACCCAAAAACAAACACATGCGAAGAACAAGTaGCTAGCATCCTGCAGGATT | + |
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Preference number: 2 (lower is better) Translates to: HLVHLKQQMSVPQTQKQTHAKNK*LASCRI Trigger: AATCCTGCAGGATGCTAGTCACTTGTTCTTCGCATG...TGTTTGTTTTTGGGTTTGTGGAACAGACATTTGCTGTTTTAGGTGGACAAGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTCCTTAAAGGTGGTTAGAATAAAACCTCCTGCTCTTACAGTCTTTCTTTCAGCACTAAGTGAGTTCTaGGTGCCCATAGAGGTTACA | + |
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Preference number: 2 (lower is better) Translates to: WSLKVVRIKPPALTVFLSALSEF*VPIEVT Trigger: TGTAACCTCTATGGGCACCCAGAACTCACTTAGTGC...TGAAAGAAAGACTGTAAGAGCAGGAGGTTTTATTCTAACCACCTTTAAGGACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR-3UTR CCA 90 bp | CACCTTGTCCACCTAAAACAGCAAATGTCTGTTCCACAAACCCAAAAACAAACAGGAGTGATATGTAACTaGAGGTGTGGTGAGTACAGA | + |
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Preference number: 2 (lower is better) Translates to: HLVHLKQQMSVPQTQKQTGVICN*RCGEYR Trigger: TCTGTACTCACCACACCTCCAGTTACATATCACTCC...TGTTTGTTTTTGGGTTTGTGGAACAGACATTTGCTGTTTTAGGTGGACAAGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR-3UTR TCA 90 bp | AATTTTTATCTAGATGAATGCCTGAACCATCTTCTTCTGTGCATGACCCAATCGTCTGTATCCATTCTTTaGTTGAGGGGCATCTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: NFYLDECLNHLLLCMTQSSVSIL*LRGIWD Trigger: ATCCCAGATGCCCCTCAATCAAAGAATGGATACAGA...CGATTGGGTCATGCACAGAAGAAGATGGTTCAGGCATTCATCTAGATAAAAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR-3UTR TCA 90 bp | CACCTTGTCCACCTAAAACAGCAAATGTCTGTTCCACAAACCCAAAAACAAACAGAATTTCATACTATATaGAACAGGGGGTGGAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: HLVHLKQQMSVPQTQKQTEFHTI*NRGWSD Trigger: ATCACTCCACCCCCTGTTTCATATAGTATGAAATTC...TGTTTGTTTTTGGGTTTGTGGAACAGACATTTGCTGTTTTAGGTGGACAAGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR-3UTR GCA 90 bp | TGGTCCTTAAAGGTGGTTAGAATAAAACCTCCTGCTCTTACAGTCTTTCTTTCACCCTTGGGAAATAGATaGAGGAGGATAAAGAGCTTA | + |
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Preference number: 2 (lower is better) Translates to: WSLKVVRIKPPALTVFLSPLGNR*RRIKSL Trigger: TAAGCTCTTTATCCTCCTGCATCTATTTCCCAAGGG...TGAAAGAAAGACTGTAAGAGCAGGAGGTTTTATTCTAACCACCTTTAAGGACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR-3UTR CCA 90 bp | CACCTTGTCCACCTAAAACAGCAAATGTCTGTTCCACAAACCCAAAAACAAACACTAGAAACATGTCGATaGAAGAGAAACTTTGGATCC | + |
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Preference number: 2 (lower is better) Translates to: HLVHLKQQMSVPQTQKQTLETCR*KRNFGS Trigger: GGATCCAAAGTTTCTCTTCCATCGACATGTTTCTAG...TGTTTGTTTTTGGGTTTGTGGAACAGACATTTGCTGTTTTAGGTGGACAAGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGTCCACCTAAAACAGCAAATGTCTGTTCCACAAACCCAAAAACAAACAAAAGAAATTCTCAGCCCTTaGGAAATAGATGCAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: LVHLKQQMSVPQTQKQTKEILSP*EIDAGG Trigger: TCCTCCTGCATCTATTTCCCAAGGGCTGAGAATTTC...TTTTGTTTGTTTTTGGGTTTGTGGAACAGACATTTGCTGTTTTAGGTGGACAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTCCTTAAAGGTGGTTAGAATAAAACCTCCTGCTCTTACAGTCTTTCTTTCACAGCCTGGAATCTTTTaGAAATTGTGTAGTCCACAT | + |
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Preference number: 2 (lower is better) Translates to: WSLKVVRIKPPALTVFLSQPGIF*KLCSPH Trigger: ATGTGGACTACACAATTTCCAAAAGATTCCAGGCTG...TGAAAGAAAGACTGTAAGAGCAGGAGGTTTTATTCTAACCACCTTTAAGGACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR-3UTR GCA 90 bp | CACCTTGTCCACCTAAAACAGCAAATGTCTGTTCCACAAACCCAAAAACAAACATGGTCAGTTTTTATCTaGCAAGTGGTGTTTGAATAT | + |
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Preference number: 2 (lower is better) Translates to: HLVHLKQQMSVPQTQKQTWSVFI*QVVFEY Trigger: ATATTCAAACACCACTTGGCAGATAAAAACTGACCA...TGTTTGTTTTTGGGTTTGTGGAACAGACATTTGCTGTTTTAGGTGGACAAGGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGTCCACCTAAAACAGCAAATGTCTGTTCCACAAACCCAAAAACAAACAAAATGGTCTTCTTTTCTCTaGCATCGGCTTTATCCAATT | + |
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Preference number: 2 (lower is better) Translates to: LVHLKQQMSVPQTQKQTKWSSFL*HRLYPI Trigger: AATTGGATAAAGCCGATGGCAGAGAAAAGAAGACCA...TTTTGTTTGTTTTTGGGTTTGTGGAACAGACATTTGCTGTTTTAGGTGGACAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR-3UTR CCA 90 bp | AATTTTTATCTAGATGAATGCCTGAACCATCTTCTTCTGTGCATGACCCAATCGGTAGAATTAATGCAGTaGTCTTCTTTTCTCTGCCAT | + |
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Preference number: 2 (lower is better) Translates to: NFYLDECLNHLLLCMTQSVELMQ*SSFLCH Trigger: ATGGCAGAGAAAAGAAGACCACTGCATTAATTCTAC...CGATTGGGTCATGCACAGAAGAAGATGGTTCAGGCATTCATCTAGATAAAAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGTCCACCTAAAACAGCAAATGTCTGTTCCACAAACCCAAAAACAAACAAAAAGAGTGGTCAGTGATTaGGTATTAATTCTTCAGATG | + |
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Preference number: 2 (lower is better) Translates to: LVHLKQQMSVPQTQKQTKRVVSD*VLILQM Trigger: CATCTGAAGAATTAATACTCAATCACTGACCACTCT...TTTTGTTTGTTTTTGGGTTTGTGGAACAGACATTTGCTGTTTTAGGTGGACAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR-3UTR CCA 90 bp | AATTTTTATCTAGATGAATGCCTGAACCATCTTCTTCTGTGCATGACCCAATCGGTGTTAATTGGGGCATaGCAGATTAATATTATACAG | + |
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Preference number: 2 (lower is better) Translates to: NFYLDECLNHLLLCMTQSVLIGA*QINIIQ Trigger: CTGTATAATATTAATCTGCCATGCCCCAATTAACAC...CGATTGGGTCATGCACAGAAGAAGATGGTTCAGGCATTCATCTAGATAAAAATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR TCA 72 bp | CAGGTGTTCTTTCCACATGTATTTCTGTGCACTAAGTaGGTTCTGGGTGCCCATAGAGGTTACAAGGGGCCA | + |
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Preference number: 3 (lower is better) Translates to: QVFFPHVFLCTK*VLGAHRGYKGP Trigger: TGGCCCCTTGTAACCTCTATGGGCACCCAGAACTCACTTAGTGCACAGAAATACATGTGGAAAGAACACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR TCA 72 bp | TCACAGATATTCACAACCAGCCATGCGAAGAACAAGTaGCTAGCATCCTGCAGGATTCACAGGTATGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: SQIFTTSHAKNK*LASCRIHRYEA Trigger: TGCCTCATACCTGTGAATCCTGCAGGATGCTAGTCACTTGTTCTTCGCATGGCTGGTTGTGAATATCTGTGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR CCA 72 bp | TCTTTCCACATGTATTTCTGTGCACTAAGTGAGTTCTaGGTGCCCATAGAGGTTACAAGGGGCCATTGGATC | + |
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Preference number: 3 (lower is better) Translates to: SFHMYFCALSEF*VPIEVTRGHWI Trigger: GATCCAATGGCCCCTTGTAACCTCTATGGGCACCCAGAACTCACTTAGTGCACAGAAATACATGTGGAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR-3UTR CAA 90 bp | CACCTTGTCCACCTAAAACAGCAAATGTCTGTTCCACAAACCCAAAAACAAACAGGTTACAAGGGGCCATaGGATCCTTTTGACCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: HLVHLKQQMSVPQTQKQTGYKGP*DPFDLE Trigger: CTCCAGGTCAAAAGGATCCAATGGCCCCTTGTAACC...TGTTTGTTTTTGGGTTTGTGGAACAGACATTTGCTGTTTTAGGTGGACAAGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR GCA 72 bp | TTTTATCTAGATGAATGCCTGAACCATCTTCTTCTGTaGATGACCCAATCGACAGACACAGCCAGTGCTCAT | + |
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Preference number: 3 (lower is better) Translates to: FYLDECLNHLLL*MTQSTDTASAH Trigger: ATGAGCACTGGCTGTGTCTGTCGATTGGGTCATGCACAGAAGAAGATGGTTCAGGCATTCATCTAGATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR CCA 72 bp | ATTAGAAAACATGGGGAAGTCCTCAACAGCAATCGATaGGCTGTGTGTAAACTCCAAGTTGTATTTCTTCAC | + |
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Preference number: 3 (lower is better) Translates to: IRKHGEVLNSNR*AVCKLQVVFLH Trigger: GTGAAGAAATACAACTTGGAGTTTACACACAGCCCATCGATTGCTGTTGAGGACTTCCCCATGTTTTCTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR-3UTR CAA 90 bp | CTGCATGTAGAATTAATGCAGTGGTCTTCTTTTCTCTGCCATCGGCTTTATCCATTGATCATCTTCCAGTaGATGGTACCAACTAGATCT | + |
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Preference number: 3 (lower is better) Translates to: LHVELMQWSSFLCHRLYPLIIFQ*MVPTRS Trigger: AGATCTAGTTGGTACCATCAACTGGAAGATGATCAA...TGGATAAAGCCGATGGCAGAGAAAAGAAGACCACTGCATTAATTCTACATGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR-3UTR CAA 90 bp | TGGTCCTTAAAGGTGGTTAGAATAAAACCTCCTGCTCTTACAGTCTTTCTTTCATTCTGTATCCATTCTTaGATTGAGGGGCATCTGGGA | + |
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Preference number: 3 (lower is better) Translates to: WSLKVVRIKPPALTVFLSFCIHS*IEGHLG Trigger: TCCCAGATGCCCCTCAATCAAAGAATGGATACAGAA...TGAAAGAAAGACTGTAAGAGCAGGAGGTTTTATTCTAACCACCTTTAAGGACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR-3UTR CAA 90 bp | TGGTCCTTAAAGGTGGTTAGAATAAAACCTCCTGCTCTTACAGTCTTTCTTTCAAGAAATGACACTAGATaGTCACTGTGGACCAAACCT | + |
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Preference number: 3 (lower is better) Translates to: WSLKVVRIKPPALTVFLSRNDTR*SLWTKP Trigger: AGGTTTGGTCCACAGTGACAATCTAGTGTCATTTCT...TGAAAGAAAGACTGTAAGAGCAGGAGGTTTTATTCTAACCACCTTTAAGGACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR-3UTR CAA 90 bp | CACCTTGTCCACCTAAAACAGCAAATGTCTGTTCCACAAACCCAAAAACAAACAGGAACTTCAGACAGCTaGATTCACATCTTGAAACAA | + |
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Preference number: 3 (lower is better) Translates to: HLVHLKQQMSVPQTQKQTGTSDS*IHILKQ Trigger: TTGTTTCAAGATGTGAATCAAGCTGTCTGAAGTTCC...TGTTTGTTTTTGGGTTTGTGGAACAGACATTTGCTGTTTTAGGTGGACAAGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR TCA 72 bp | AGAAATGAACCACATTTTCTGTATCCATTCTTTGATTaGGGGGCATCTGGGATGTTTCCAGCTTCACCTATT | + |
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Preference number: 3 (lower is better) Translates to: RNEPHFLYPFFD*GASGMFPASPI Trigger: AATAGGTGAAGCTGGAAACATCCCAGATGCCCCTCAATCAAAGAATGGATACAGAAAATGTGGTTCATTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR CCA 72 bp | TTTAACCAAGAGTGTGGACTTCCTGACTTCATCCGTTaGTCAGTTTTTATCTGCCAAGTGGTGTTTGAATAT | + |
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Preference number: 3 (lower is better) Translates to: FNQECGLPDFIR*SVFICQVVFEY Trigger: ATATTCAAACACCACTTGGCAGATAAAAACTGACCAACGGATGAAGTCAGGAAGTCCACACTCTTGGTTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR CCA 72 bp | ACCCACAAAACTACTCTGCATGTAGAATTAATGCAGTaGTCTTCTTTTCTCTGCCATCGGCTTTATCCAATT | + |
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Preference number: 3 (lower is better) Translates to: THKTTLHVELMQ*SSFLCHRLYPI Trigger: AATTGGATAAAGCCGATGGCAGAGAAAAGAAGACCACTGCATTAATTCTACATGCAGAGTAGTTTTGTGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR-3UTR CAA 90 bp | TGGTCCTTAAAGGTGGTTAGAATAAAACCTCCTGCTCTTACAGTCTTTCTTTCACCTTTTGACCTGGAGTaGAGGAATGTTAGTTTTCAA | + |
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Preference number: 3 (lower is better) Translates to: WSLKVVRIKPPALTVFLSPFDLE*RNVSFQ Trigger: TTGAAAACTAACATTCCTCAACTCCAGGTCAAAAGG...TGAAAGAAAGACTGTAAGAGCAGGAGGTTTTATTCTAACCACCTTTAAGGACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR-3UTR CAA 90 bp | CACCTTGTCCACCTAAAACAGCAAATGTCTGTTCCACAAACCCAAAAACAAACACTCAGCTGTATTGAGTaGGTAATTCAATGTGTTTGT | + |
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Preference number: 3 (lower is better) Translates to: HLVHLKQQMSVPQTQKQTLSCIE*VIQCVC Trigger: ACAAACACATTGAATTACCAACTCAATACAGCTGAG...TGTTTGTTTTTGGGTTTGTGGAACAGACATTTGCTGTTTTAGGTGGACAAGGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR TCA 72 bp | AAGAGAATTTCATACTATATGAAACAGGGGGTGGAGTaGTATGTAACTGGAGGTGTGGTGAGTACAGATTTT | + |
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Preference number: 3 (lower is better) Translates to: KRISYYMKQGVE*YVTGGVVSTDF Trigger: AAAATCTGTACTCACCACACCTCCAGTTACATATCACTCCACCCCCTGTTTCATATAGTATGAAATTCTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR-3UTR CAA 90 bp | AATTTTTATCTAGATGAATGCCTGAACCATCTTCTTCTGTGCATGACCCAATCGCCACAAATTCCAACTTaGGAAGAAATGACACTAGAT | + |
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Preference number: 3 (lower is better) Translates to: NFYLDECLNHLLLCMTQSPQIPT*EEMTLD Trigger: ATCTAGTGTCATTTCTTCCAAAGTTGGAATTTGTGG...CGATTGGGTCATGCACAGAAGAAGATGGTTCAGGCATTCATCTAGATAAAAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR TCA 72 bp | AAACCAAAACAACCCTGCCCCATACCTCAGCTGTATTaGGTTGGTAATTCAATGTGTTTGTATGAAACAAAA | + |
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Preference number: 3 (lower is better) Translates to: KPKQPCPIPQLY*VGNSMCLYETK Trigger: TTTTGTTTCATACAAACACATTGAATTACCAACTCAATACAGCTGAGGTATGGGGCAGGGTTGTTTTGGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR CCA 72 bp | TCTGGGATATGTTCTCTAAAGGTGTTAATTGGGGCATaGCAGATTAATATTATACAGCCAGTGGTTTTAATC | + |
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Preference number: 3 (lower is better) Translates to: SGICSLKVLIGA*QINIIQPVVLI Trigger: GATTAAAACCACTGGCTGTATAATATTAATCTGCCATGCCCCAATTAACACCTTTAGAGAACATATCCCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR TCA 72 bp | GCCATTTTATCATTCCAAGAGTTGAGAAAGGCAAACTaGTTATATCACCACATTCTAGAACAGGAAGTCAAA | + |
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Preference number: 3 (lower is better) Translates to: AILSFQELRKAN*LYHHILEQEVK Trigger: TTTGACTTCCTGTTCTAGAATGTGGTGATATAATCAGTTTGCCTTTCTCAACTCTTGGAATGATAAAATGGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR TCA 72 bp | TCAGCACTTTTTAGTTTTCAATACTTGACCATCATGTaGCACAATCCAGATGAATACATAGCTTGGAGATGT | + |
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Preference number: 3 (lower is better) Translates to: SALFSFQYLTIM*HNPDEYIAWRC Trigger: ACATCTCCAAGCTATGTATTCATCTGGATTGTGTCACATGATGGTCAAGTATTGAAAACTAAAAAGTGCTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| 3UTR TCA 72 bp | GTTGGTAATTCAATGTGTTTGTATGAAACAAAACGGTaGGTAAAACAGCAAGCTACACTAATTAGCTGCTTA | + |
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Preference number: 3 (lower is better) Translates to: VGNSMCLYETKR*VKQQATLISCL Trigger: TAAGCAGCTAATTAGTGTAGCTTGCTGTTTTACTCACCGTTTTGTTTCATACAAACACATTGAATTACCAAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| CDS-3UTR TCA 90 bp | CACCTTGTCCACCTAAAACAGCAAATGTCTGTTCCACAAACCCAAAAACAAACAAGTCCTGTCTGGTGCTaGGGACGAGTGCAGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: HLVHLKQQMSVPQTQKQTSPVWC*GRVQAA Trigger: TGCTGCCTGCACTCGTCCTCAGCACCAGACAGGACT...TGTTTGTTTTTGGGTTTGTGGAACAGACATTTGCTGTTTTAGGTGGACAAGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| CDS-3UTR TCA 90 bp | CTGCATGTAGAATTAATGCAGTGGTCTTCTTTTCTCTGCCATCGGCTTTATCCACTCAAAGGAGGAGGCTaGTCACGGAAAACTGATGAC | + |
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Preference number: 4 (lower is better) Translates to: LHVELMQWSSFLCHRLYPLKGGG*SRKTDD Trigger: GTCATCAGTTTTCCGTGATCAGCCTCCTCCTTTGAG...TGGATAAAGCCGATGGCAGAGAAAAGAAGACCACTGCATTAATTCTACATGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| CDS-3UTR GCA 90 bp | CTGCATGTAGAATTAATGCAGTGGTCTTCTTTTCTCTGCCATCGGCTTTATCCAGCTCTGATTCTGCAGTaGTGTTACTTTGGGGACCCT | + |
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Preference number: 4 (lower is better) Translates to: LHVELMQWSSFLCHRLYPALILQ*CYFGDP Trigger: AGGGTCCCCAAAGTAACAGCACTGCAGAATCAGAGC...TGGATAAAGCCGATGGCAGAGAAAAGAAGACCACTGCATTAATTCTACATGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| CDS-3UTR TCA 90 bp | ACTTTCAAAGTATTTAACCAAGAGTGTGGACTTCCTGACTTCATCCGTTGGTCAGATGTCTCTTTAAGCTaGTTCTGCAGGGCTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: TFKVFNQECGLPDFIRWSDVSLS*FCRASW Trigger: CCAGGAAGCCCTGCAGAATCAGCTTAAAGAGACATC...TGACCAACGGATGAAGTCAGGAAGTCCACACTCTTGGTTAAATACTTTGAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| CDS-3UTR CCA 90 bp | TGGTCCTTAAAGGTGGTTAGAATAAAACCTCCTGCTCTTACAGTCTTTCTTTCATGGCTTCTGGAATCCTaGAAGCAACAGTCCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WSLKVVRIKPPALTVFLSWLLES*KQQSWV Trigger: CACCCAGGACTGTTGCTTCCAGGATTCCAGAAGCCA...TGAAAGAAAGACTGTAAGAGCAGGAGGTTTTATTCTAACCACCTTTAAGGACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS-3UTR TCA 90 bp | CACCTTGTCCACCTAAAACAGCAAATGTCTGTTCCACAAACCCAAAAACAAACATTGGATTTGATGGCATaGGACTCAAAGGAGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLVHLKQQMSVPQTQKQTLDLMA*DSKEEA Trigger: AGCCTCCTCCTTTGAGTCTCATGCCATCAAATCCAA...TGTTTGTTTTTGGGTTTGTGGAACAGACATTTGCTGTTTTAGGTGGACAAGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS-3UTR TCA 90 bp | CTTGTCCACCTAAAACAGCAAATGTCTGTTCCACAAACCCAAAAACAAACAAAAGAACTACCCTCATCTTaGGGACCACACACAGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LVHLKQQMSVPQTQKQTKELPSS*GPHTEG Trigger: ACCCTCTGTGTGTGGTCCTCAAGATGAGGGTAGTTC...TTTTGTTTGTTTTTGGGTTTGTGGAACAGACATTTGCTGTTTTAGGTGGACAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS-3UTR TCA 90 bp | CTTGTCCACCTAAAACAGCAAATGTCTGTTCCACAAACCCAAAAACAAACAAAACCCATCGAAACTGGCTaGTGGGTTTTCTGGGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVHLKQQMSVPQTQKQTKPIETG*WVFWAF Trigger: AAAGGCCCAGAAAACCCATCAGCCAGTTTCGATGGG...TTTTGTTTGTTTTTGGGTTTGTGGAACAGACATTTGCTGTTTTAGGTGGACAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS-3UTR CCA 90 bp | ACTTTCAAAGTATTTAACCAAGAGTGTGGACTTCCTGACTTCATCCGTTGGTCATCTTCCCTTTGTCTCTaGCCTAACTCCAGAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TFKVFNQECGLPDFIRWSSSLCL*PNSRSF Trigger: GAAGCTTCTGGAGTTAGGCCAGAGACAAAGGGAAGA...TGACCAACGGATGAAGTCAGGAAGTCCACACTCTTGGTTAAATACTTTGAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS-3UTR CCA 90 bp | CACCTTGTCCACCTAAAACAGCAAATGTCTGTTCCACAAACCCAAAAACAAACATTCTGCAGGGCTTCCTaGAGAGACTTCATTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HLVHLKQQMSVPQTQKQTFCRAS*RDFISS Trigger: GGAAGAAATGAAGTCTCTCCAGGAAGCCCTGCAGAA...TGTTTGTTTTTGGGTTTGTGGAACAGACATTTGCTGTTTTAGGTGGACAAGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS-3UTR CCA 90 bp | CACCTTGTCCACCTAAAACAGCAAATGTCTGTTCCACAAACCCAAAAACAAACATGGAGAACTTGGTTGTaGCTTGCTTTTAGTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HLVHLKQQMSVPQTQKQTWRTWL*LAFSPG Trigger: GCCAGGACTAAAAGCAAGCCACAACCAAGTTCTCCA...TGTTTGTTTTTGGGTTTGTGGAACAGACATTTGCTGTTTTAGGTGGACAAGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS-3UTR TCA 90 bp | ACTTTCAAAGTATTTAACCAAGAGTGTGGACTTCCTGACTTCATCCGTTGGTCATTAGACTCTTCTGCATaGATCCCACACAGCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TFKVFNQECGLPDFIRWSLDSSA*IPHSLL Trigger: AAGCAAGCTGTGTGGGATTCATGCAGAAGAGTCTAA...TGACCAACGGATGAAGTCAGGAAGTCCACACTCTTGGTTAAATACTTTGAAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS-3UTR TCA 90 bp | AATTTTTATCTAGATGAATGCCTGAACCATCTTCTTCTGTGCATGACCCAATCGCATTGCTTTCATCTGTaGTTCCCTGTCAAGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NFYLDECLNHLLLCMTQSHCFHL*FPVKSC Trigger: GCAGCTCTTGACAGGGAATCACAGATGAAAGCAATG...CGATTGGGTCATGCACAGAAGAAGATGGTTCAGGCATTCATCTAGATAAAAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS-3UTR CCA 90 bp | ACTTTCAAAGTATTTAACCAAGAGTGTGGACTTCCTGACTTCATCCGTTGGTCATTTAGTCCTGGCTTCTaGAATCCTGGAAGCAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: TFKVFNQECGLPDFIRWSFSPGF*NPGSNS Trigger: ACTGTTGCTTCCAGGATTCCAGAAGCCAGGACTAAA...TGACCAACGGATGAAGTCAGGAAGTCCACACTCTTGGTTAAATACTTTGAAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS-3UTR GCA 90 bp | CACCTTGTCCACCTAAAACAGCAAATGTCTGTTCCACAAACCCAAAAACAAACATTAATTGTGGCCTGGTaGTTCTCTGCTTTCTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HLVHLKQQMSVPQTQKQTLIVAW*FSAFSD Trigger: ATCTGAGAAAGCAGAGAAGCACCAGGCCACAATTAA...TGTTTGTTTTTGGGTTTGTGGAACAGACATTTGCTGTTTTAGGTGGACAAGGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS-3UTR GCA 90 bp | CTGCATGTAGAATTAATGCAGTGGTCTTCTTTTCTCTGCCATCGGCTTTATCCAGAATCCCACACAGCTTaGTTCCTGACAATAATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LHVELMQWSSFLCHRLYPESHTA*FLTIIC Trigger: ACAAATTATTGTCAGGAAGCAAGCTGTGTGGGATTC...TGGATAAAGCCGATGGCAGAGAAAAGAAGACCACTGCATTAATTCTACATGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS-3UTR CCA 90 bp | CTGCATGTAGAATTAATGCAGTGGTCTTCTTTTCTCTGCCATCGGCTTTATCCAAAATTAATTGTGGCCTaGTGCTTCTCTGCTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHVELMQWSSFLCHRLYPKLIVA*CFSAFS Trigger: TGAGAAAGCAGAGAAGCACCAGGCCACAATTAATTT...TGGATAAAGCCGATGGCAGAGAAAAGAAGACCACTGCATTAATTCTACATGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS-3UTR CCA 90 bp | AATTTTTATCTAGATGAATGCCTGAACCATCTTCTTCTGTGCATGACCCAATCGGGTGGATGTAACATCTaGGTTGGATTTGATGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: NFYLDECLNHLLLCMTQSGGCNI*VGFDGM Trigger: CATGCCATCAAATCCAACCCAGATGTTACATCCACC...CGATTGGGTCATGCACAGAAGAAGATGGTTCAGGCATTCATCTAGATAAAAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS-3UTR GCA 90 bp | AATTTTTATCTAGATGAATGCCTGAACCATCTTCTTCTGTGCATGACCCAATCGAACTCCAGAAGCTTCTaGACATCGGTTTTGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NFYLDECLNHLLLCMTQSNSRSF*TSVLED Trigger: ATCTTCCAAAACCGATGTGCAGAAGCTTCTGGAGTT...CGATTGGGTCATGCACAGAAGAAGATGGTTCAGGCATTCATCTAGATAAAAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| 3UTR CAA 72 bp | ATTGTAGAAATGAACCACATTTTCTGTATCCATTCTTaGATTGAGGGGCATCTGGGATGTTTCCAGCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: IVEMNHIFCIHS*IEGHLGCFQLH Trigger: GTGAAGCTGGAAACATCCCAGATGCCCCTCAATCAAAGAATGGATACAGAAAATGTGGTTCATTTCTACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| 3UTR CAA 72 bp | CCCACAAATTCCAACTTTGGAAGAAATGACACTAGATaGTCACTGTGGACCAAACCTTCATATGTTTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PTNSNFGRNDTR*SLWTKPSYVCK Trigger: TTTGCAAACATATGAAGGTTTGGTCCACAGTGACAATCTAGTGTCATTTCTTCCAAAGTTGGAATTTGTGGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTCAAAGTATTTAACCAAGAGTGTGGACTTCCTGACTTCATCCGTTGGTCATCGGTTTTGGAAGATTaGTCATCATTTTTCAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TFKVFNQECGLPDFIRWSSVLED*SSFFKD Trigger: GTCTTTGAAAAATGATGAGCAATCTTCCAAAACCGA...TGACCAACGGATGAAGTCAGGAAGTCCACACTCTTGGTTAAATACTTTGAAAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS-3UTR GCA 90 bp | CTTGTCCACCTAAAACAGCAAATGTCTGTTCCACAAACCCAAAAACAAACAAAAACTCTCTTCTTTTGTTaGTTGAACTTGAGAGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVHLKQQMSVPQTQKQTKTLFFC*LNLRAV Trigger: GACAGCTCTCAAGTTCAAGCAACAAAAGAAGAGAGT...TTTTGTTTGTTTTTGGGTTTGTGGAACAGACATTTGCTGTTTTAGGTGGACAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS-3UTR CCA 90 bp | ACTTTCAAAGTATTTAACCAAGAGTGTGGACTTCCTGACTTCATCCGTTGGTCAAGTTCAGTGAGTTGTTaGGCCTTAAATAACAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: TFKVFNQECGLPDFIRWSSSVSC*ALNNKS Trigger: AGATTTGTTATTTAAGGCCCAACAACTCACTGAACT...TGACCAACGGATGAAGTCAGGAAGTCCACACTCTTGGTTAAATACTTTGAAAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS-3UTR CCA 90 bp | ACTTTCAAAGTATTTAACCAAGAGTGTGGACTTCCTGACTTCATCCGTTGGTCATCTCAAGTTCATTTTTaGCTACAGCTAGCTTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TFKVFNQECGLPDFIRWSSQVHF*LQLAFV Trigger: AACAAAAGCTAGCTGTAGCCAAAAATGAACTTGAGA...TGACCAACGGATGAAGTCAGGAAGTCCACACTCTTGGTTAAATACTTTGAAAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| 3UTR CAA 72 bp | TCTAAAATAATGTATTCTGGCCCACAAATTCCAACTTaGGAAGAAATGACACTAGATTGTCACTGTGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: SKIMYSGPQIPT*EEMTLDCHCGP Trigger: TGGTCCACAGTGACAATCTAGTGTCATTTCTTCCAAAGTTGGAATTTGTGGGCCAGAATACATTATTTTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| 3UTR CAA 72 bp | GTGATATGTAACTGGAGGTGTGGTGAGTACAGATTTTaGTCTCCTGATCTTATATTTTATCTTGGTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VICNWRCGEYRF*SPDLIFYLGQF Trigger: GAACTGACCAAGATAAAATATAAGATCAGGAGACAAAAATCTGTACTCACCACACCTCCAGTTACATATCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS-3UTR TCA 90 bp | CTTGTCCACCTAAAACAGCAAATGTCTGTTCCACAAACCCAAAAACAAACAAAATCATTTTTCAAAGACTaGAGGTTCACTTTGATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LVHLKQQMSVPQTQKQTKSFFKD*RFTLIP Trigger: TGGGATCAAAGTGAACCTTCAGTCTTTGAAAAATGA...TTTTGTTTGTTTTTGGGTTTGTGGAACAGACATTTGCTGTTTTAGGTGGACAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTCCACCTAAAACAGCAAATGTCTGTTCCACAAACCCAAAAACAAACAAAATCTGCACATCGGTTTTaGAAGATTGCTCATCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVHLKQQMSVPQTQKQTKSAHRF*KIAHHF Trigger: AAAATGATGAGCAATCTTCCAAAACCGATGTGCAGA...TTTTGTTTGTTTTTGGGTTTGTGGAACAGACATTTGCTGTTTTAGGTGGACAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS TCA 90 bp | TGGGGACCCTCCTCATGCTTCACCAAACAGGAACTACCCTCATCTTaGGGACCACACACAGAGGGTCTCCTACTCTCTTCTTTTGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: WGPSSCFTKQELPSS*GPHTEGLLLSSFVA Trigger: AGCAACAAAAGAAGAGAGTAGGAGACCCTCTGTGTGTGGTCCTCAAGATGAGGGTAGTTCCTGTTTGGTGAAGCATGAGGAGGGTCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS GCA 90 bp | AGGTTCACTTTGATCCCATCCAGTTCTCTGGATGTCTTTGTCAGCTaGCGCAGGACTGTGCTACGCTCCTTAAAGACTTCCTTCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RFTLIPSSSLDVFVS*RRTVLRSLKTSFSC Trigger: GCAGCTGAAGGAAGTCTTTAAGGAGCGTAGCACAGTCCTGCGGCAGCTGACAAAGACATCCAGAGAACTGGATGGGATCAAAGTGAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS TCA 90 bp | CAACAGTCCTGGGTGGATGTAACATCTGGGTTGGATTTGATGGCATaGGACTCAAAGGAGGAGGCTGATCACGGAAAACTGATGACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: QQSWVDVTSGLDLMA*DSKEEADHGKLMTS Trigger: GCTTGTCATCAGTTTTCCGTGATCAGCCTCCTCCTTTGAGTCTCATGCCATCAAATCCAACCCAGATGTTACATCCACCCAGGACTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS CCA 90 bp | TTCTGCAGGGCTTCCTGGAGAGACTTCATTTCTTCCCTTTGTCTCTaGCCTAACTCCAGAAGCTTCTGCACATCGGTTTTGGAAGATTGC | + |
|
Preference number: 5 (lower is better) Translates to: FCRASWRDFISSLCL*PNSRSFCTSVLEDC Trigger: GCAATCTTCCAAAACCGATGTGCAGAAGCTTCTGGAGTTAGGCCAGAGACAAAGGGAAGAAATGAAGTCTCTCCAGGAAGCCCTGCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS TCA 90 bp | AACATCTGGGTTGGATTTGATGGCATGAGACTCAAAGGAGGAGGCTaGTCACGGAAAACTGATGACAAGCAGAGTTGTACGGTCTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NIWVGFDGMRLKGGG*SRKTDDKQSCTVSF Trigger: GAAAGAGACCGTACAACTCTGCTTGTCATCAGTTTTCCGTGATCAGCCTCCTCCTTTGAGTCTCATGCCATCAAATCCAACCCAGATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS-3UTR CAA 90 bp | CTGCATGTAGAATTAATGCAGTGGTCTTCTTTTCTCTGCCATCGGCTTTATCCATGCAGTGCTGTTACTTaGGGGACCCTCCTCATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LHVELMQWSSFLCHRLYPCSAVT*GTLLML Trigger: AAGCATGAGGAGGGTCCCCAAAGTAACAGCACTGCA...TGGATAAAGCCGATGGCAGAGAAAAGAAGACCACTGCATTAATTCTACATGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS-3UTR CAA 90 bp | CTGCATGTAGAATTAATGCAGTGGTCTTCTTTTCTCTGCCATCGGCTTTATCCATCCTGGAGAACTTGGTaGTGGCTTGCTTTTAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LHVELMQWSSFLCHRLYPSWRTW*WLAFSP Trigger: AGGACTAAAAGCAAGCCACAACCAAGTTCTCCAGGA...TGGATAAAGCCGATGGCAGAGAAAAGAAGACCACTGCATTAATTCTACATGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS TCA 90 bp | TTTTGGAAGATTGCTCATCATTTTTCAAAGACTGAAGGTTCACTTTaGTCCCATCCAGTTCTCTGGATGTCTTTGTCAGCTGCCGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FWKIAHHFSKTEGSL*SHPVLWMSLSAAAG Trigger: TCCTGCGGCAGCTGACAAAGACATCCAGAGAACTGGATGGGATCAAAGTGAACCTTCAGTCTTTGAAAAATGATGAGCAATCTTCCAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS-3UTR CAA 90 bp | CACCTTGTCCACCTAAAACAGCAAATGTCTGTTCCACAAACCCAAAAACAAACAGAACTTGGTTGTGGCTaGCTTTTAGTCCTGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HLVHLKQQMSVPQTQKQTELGCG*LLVLAS Trigger: AGAAGCCAGGACTAAAAGCAAGCCACAACCAAGTTC...TGTTTGTTTTTGGGTTTGTGGAACAGACATTTGCTGTTTTAGGTGGACAAGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS-3UTR CAA 90 bp | CACCTTGTCCACCTAAAACAGCAAATGTCTGTTCCACAAACCCAAAAACAAACAGTACGGTCTCTTTCATaGCTTTCATCTGTGATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: HLVHLKQQMSVPQTQKQTVRSLS*LSSVIP Trigger: GGGAATCACAGATGAAAGCAATGAAAGAGACCGTAC...TGTTTGTTTTTGGGTTTGTGGAACAGACATTTGCTGTTTTAGGTGGACAAGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS TCA 90 bp | TTCTGCACATCGGTTTTGGAAGATTGCTCATCATTTTTCAAAGACTaGAGGTTCACTTTGATCCCATCCAGTTCTCTGGATGTCTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: FCTSVLEDCSSFFKD*RFTLIPSSSLDVFV Trigger: GACAAAGACATCCAGAGAACTGGATGGGATCAAAGTGAACCTTCAGTCTTTGAAAAATGATGAGCAATCTTCCAAAACCGATGTGCAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS-3UTR CAA 90 bp | CACCTTGTCCACCTAAAACAGCAAATGTCTGTTCCACAAACCCAAAAACAAACATTTTGTTGCTTGAACTaGAGAGCTGTCATGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HLVHLKQQMSVPQTQKQTFCCLN*RAVMMS Trigger: GGACATCATGACAGCTCTCAAGTTCAAGCAACAAAA...TGTTTGTTTTTGGGTTTGTGGAACAGACATTTGCTGTTTTAGGTGGACAAGGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS-3UTR CAA 90 bp | TGGTCCTTAAAGGTGGTTAGAATAAAACCTCCTGCTCTTACAGTCTTTCTTTCAAAGTCACGGATCATTTaGCTCTTTCTTTCCACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: WSLKVVRIKPPALTVFLSKSRII*LFLSTS Trigger: TGAAGTGGAAAGAAAGAGCAAAATGATCCGTGACTT...TGAAAGAAAGACTGTAAGAGCAGGAGGTTTTATTCTAACCACCTTTAAGGACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS-3UTR CAA 90 bp | CACCTTGTCCACCTAAAACAGCAAATGTCTGTTCCACAAACCCAAAAACAAACATTCTCAAGTTCATTTTaGGCTACAGCTAGCTTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: HLVHLKQQMSVPQTQKQTFSSSF*ATASFC Trigger: ACAAAAGCTAGCTGTAGCCAAAAATGAACTTGAGAA...TGTTTGTTTTTGGGTTTGTGGAACAGACATTTGCTGTTTTAGGTGGACAAGGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS GCA 72 bp | TTGATCCCATCCAGTTCTCTGGATGTCTTTGTCAGCTaGCGCAGGACTGTGCTACGCTCCTTAAAGACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LIPSSSLDVFVS*RRTVLRSLKTS Trigger: GGAAGTCTTTAAGGAGCGTAGCACAGTCCTGCGGCAGCTGACAAAGACATCCAGAGAACTGGATGGGATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS TCA 72 bp | TCCTCATGCTTCACCAAACAGGAACTACCCTCATCTTaGGGACCACACACAGAGGGTCTCCTACTCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSCFTKQELPSS*GPHTEGLLLSS Trigger: AGAAGAGAGTAGGAGACCCTCTGTGTGTGGTCCTCAAGATGAGGGTAGTTCCTGTTTGGTGAAGCATGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS TCA 72 bp | TGGGTGGATGTAACATCTGGGTTGGATTTGATGGCATaGGACTCAAAGGAGGAGGCTGATCACGGAAAACTG | + |
|
Preference number: 6 (lower is better) Translates to: WVDVTSGLDLMA*DSKEEADHGKL Trigger: CAGTTTTCCGTGATCAGCCTCCTCCTTTGAGTCTCATGCCATCAAATCCAACCCAGATGTTACATCCACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS CCA 72 bp | TTGAGAGCTGTCATGATGTCCTGGAGAACTTGGTTGTaGCTTGCTTTTAGTCCTGGCTTCTGGAATCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LRAVMMSWRTWL*LAFSPGFWNPG Trigger: TCCAGGATTCCAGAAGCCAGGACTAAAAGCAAGCCACAACCAAGTTCTCCAGGACATCATGACAGCTCTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS CCA 72 bp | TGTGTTGTGAGCTCTGATTCTGCAGTGCTGTTACTTTaGGGACCCTCCTCATGCTTCACCAAACAGGAACTA | + |
|
Preference number: 6 (lower is better) Translates to: CVVSSDSAVLLL*GPSSCFTKQEL Trigger: TAGTTCCTGTTTGGTGAAGCATGAGGAGGGTCCCCAAAGTAACAGCACTGCAGAATCAGAGCTCACAACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS CAA 72 bp | GACCACACACAGAGGGTCTCCTACTCTCTTCTTTTGTaGCTTGAACTTGAGAGCTGTCATGATGTCCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: DHTQRVSYSLLL*LELESCHDVLE Trigger: CTCCAGGACATCATGACAGCTCTCAAGTTCAAGCAACAAAAGAAGAGAGTAGGAGACCCTCTGTGTGTGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS GCA 72 bp | ACCACACACAGAGGGTCTCCTACTCTCTTCTTTTGTTaGTTGAACTTGAGAGCTGTCATGATGTCCTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: TTHRGSPTLFFC*LNLRAVMMSWR Trigger: TCTCCAGGACATCATGACAGCTCTCAAGTTCAAGCAACAAAAGAAGAGAGTAGGAGACCCTCTGTGTGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS CCA 72 bp | TTTTGTTGCTTGAACTTGAGAGCTGTCATGATGTCCTaGAGAACTTGGTTGTGGCTTGCTTTTAGTCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: FCCLNLRAVMMS*RTWLWLAFSPG Trigger: GCCAGGACTAAAAGCAAGCCACAACCAAGTTCTCCAGGACATCATGACAGCTCTCAAGTTCAAGCAACAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
||
| CDS CAA 72 bp | AGAGGGTCTCCTACTCTCTTCTTTTGTTGCTTGAACTaGAGAGCTGTCATGATGTCCTGGAGAACTTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: RGSPTLFFCCLN*RAVMMSWRTWL Trigger: CAACCAAGTTCTCCAGGACATCATGACAGCTCTCAAGTTCAAGCAACAAAAGAAGAGAGTAGGAGACCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| CDS CCA 72 bp | TCTGGCCTAACTCCAGAAGCTTCTGCACATCGGTTTTaGAAGATTGCTCATCATTTTTCAAAGACTGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: SGLTPEASAHRF*KIAHHFSKTEG Trigger: ACCTTCAGTCTTTGAAAAATGATGAGCAATCTTCCAAAACCGATGTGCAGAAGCTTCTGGAGTTAGGCCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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| CDS TCA 72 bp | TCGGTTTTGGAAGATTGCTCATCATTTTTCAAAGACTaGAGGTTCACTTTGATCCCATCCAGTTCTCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: SVLEDCSSFFKD*RFTLIPSSSLD Trigger: ATCCAGAGAACTGGATGGGATCAAAGTGAACCTTCAGTCTTTGAAAAATGATGAGCAATCTTCCAAAACCGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082373.8 |
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