Pregenerated sensors for LUZP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001089Ensembl transcript IDs: ENSMUST00000001116.5, ENSMUST00000063021.7, ENSMUST00000105849.9, ENSMUST00000129230.3, ENSMUST00000168936.2, ENSMUST00000170102.8
Found 514 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACATGCACCCAAGGAGCCCTGAGCCACTGCCTGTGGCTGTGCCCTaGTTTCCAGAGGCAGGTTCTGGCCTCTCTGGTCCCGTGCTTGGA | + |
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Preference number: 1 (lower is better) Translates to: HMHPRSPEPLPVAVP*FPEAGSGLSGPVLG Trigger: TCCAAGCACGGGACCAGAGAGGCCAGAACCTGCCTCTGGAAAGCAGGGCACAGCCACAGGCAGTGGCTCAGGGCTCCTTGGGTGCATGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR CCA 90 bp | GCCTGGCTCTCTACAGTCTCCCAGCCAAGGCCTTTGTGTCTAGCCTaGTTAACTGGCCTTGGGTCCTTCACAGGCCAGGATTGGGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: AWLSTVSQPRPLCLA*LTGLGSFTGQDWGG Trigger: TCCTCCCCAATCCTGGCCTGTGAAGGACCCAAGGCCAGTTAACCAGGCTAGACACAAAGGCCTTGGCTGGGAGACTGTAGAGAGCCAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR CCA 90 bp | CACTATTGCTCTAGGCACCGGCCCCTGCCACTTGAGAGGGATGGCTaGTGTGCAAGCTTGCCTGTAGCCTTGGTCCCACACAGATCTCTT | + |
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Preference number: 1 (lower is better) Translates to: HYCSRHRPLPLERDG*CASLPVALVPHRSL Trigger: AAGAGATCTGTGTGGGACCAAGGCTACAGGCAAGCTTGCACACCAGCCATCCCTCTCAAGTGGCAGGGGCCGGTGCCTAGAGCAATAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR GCA 90 bp | GAACTCATTCTGAGCTGGGAAGCAGCAGTGGCAGAACACCTGCCTTaGACACCAGGTCCTATGCTCAATCCCCAGCATGCATCTGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: ELILSWEAAVAEHLP*TPGPMLNPQHASAG Trigger: ACCTGCAGATGCATGCTGGGGATTGAGCATAGGACCTGGTGTGCAAGGCAGGTGTTCTGCCACTGCTGCTTCCCAGCTCAGAATGAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR CCA 90 bp | ATCAGCAGTCAGCATGGTAAAGTGCAAGGTTTCCCCCACAGGGGATaGAGGAGCAAAGGGAGGGAAGCAGTCTGTCCATGCCTTTCATGG | + |
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Preference number: 1 (lower is better) Translates to: ISSQHGKVQGFPHRG*RSKGREAVCPCLSW Trigger: CCATGAAAGGCATGGACAGACTGCTTCCCTCCCTTTGCTCCTCCATCCCCTGTGGGGGAAACCTTGCACTTTACCATGCTGACTGCTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR GCA 90 bp | ACCCTGGCAGGATGGCTGAGTCTGATGCAGACAAGGGCAGATAAGTaGCAGTGTGTGTGTGCTAAGAAGGGTGAAGGGAGACTACTCAGT | + |
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Preference number: 1 (lower is better) Translates to: TLAGWLSLMQTRADK*QCVCAKKGEGRLLS Trigger: ACTGAGTAGTCTCCCTTCACCCTTCTTAGCACACACACACTGGCACTTATCTGCCCTTGTCTGCATCAGACTCAGCCATCCTGCCAGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR TCA 90 bp | TACAGGAGAGTGGCAGGGGGCACTGCAAGTGAGAGGTTGCAGCCTTaGATTAAGGAGTTTCTGGCCAGTAACCTAAAAGCAGCAGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: YRRVAGGTASERLQP*IKEFLASNLKAAAG Trigger: TCCTGCTGCTGCTTTTAGGTTACTGGCCAGAAACTCCTTAATTCAAGGCTGCAACCTCTCACTTGCAGTGCCCCCTGCCACTCTCCTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR TCA 90 bp | AGCTTGCCTGTAGCCTTGGTCCCACACAGATCTCTTCAACTCATTTaGACTGTCTCACTGCCTCAGAGTTGTCTTAGCTTCCTGGCCTGC | + |
|
Preference number: 1 (lower is better) Translates to: SLPVALVPHRSLQLI*TVSLPQSCLSFLAC Trigger: GCAGGCCAGGAAGCTAAGACAACTCTGAGGCAGTGAGACAGTTCAAATGAGTTGAAGAGATCTGTGTGGGACCAAGGCTACAGGCAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR TCA 90 bp | TTGCACACCAGGTCCTATGCTCAATCCCCAGCATGCATCTGCAGGTaGCACATGGGTACACATGCACGCAACCAACAAAGAACTCATTTT | + |
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Preference number: 1 (lower is better) Translates to: LHTRSYAQSPACICR*HMGTHARNQQRTHF Trigger: AAAATGAGTTCTTTGTTGGTTGCGTGCATGTGTACCCATGTGTCACCTGCAGATGCATGCTGGGGATTGAGCATAGGACCTGGTGTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR CCA 90 bp | GGAAAGCTGGGCCTGAGTGACTGGTTTGTAGTCTCTGATCCTATCTaGACAACTGACAAAAATTACCTGAGCCATAGCCTGGCTCTCTAC | + |
|
Preference number: 1 (lower is better) Translates to: GKLGLSDWFVVSDPI*TTDKNYLSHSLALY Trigger: GTAGAGAGCCAGGCTATGGCTCAGGTAATTTTTGTCAGTTGTCCAGATAGGATCAGAGACTACAAACCAGTCACTCAGGCCCAGCTTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR TCA 90 bp | AGGAGACAAATCAGGGTATCAAACACAGCAAAAGGGACTGGGCTTTaGTATACAAACTGCTTACCATGGAGCAGAGGAGAGGGCTTTGGC | + |
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Preference number: 1 (lower is better) Translates to: RRQIRVSNTAKGTGL*YTNCLPWSRGEGFG Trigger: GCCAAAGCCCTCTCCTCTGCTCCATGGTAAGCAGTTTGTATATCAAAGCCCAGTCCCTTTTGCTGTGTTTGATACCCTGATTTGTCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR GCA 90 bp | AGACAATGGTTTGAATACCAGTCTCCCTTCTATGTGGAGGCTTCCTaGAGCTTCTGGCTTGGGCCCAAAGGTTACATCTTGGTGTTTTCA | + |
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Preference number: 1 (lower is better) Translates to: RQWFEYQSPFYVEAS*SFWLGPKGYILVFS Trigger: TGAAAACACCAAGATGTAACCTTTGGGCCCAAGCCAGAAGCTGCAGGAAGCCTCCACATAGAAGGGAGACTGGTATTCAAACCATTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR CCA 90 bp | ATACCAGTCTCCCTTCTATGTGGAGGCTTCCTGCAGCTTCTGGCTTaGGCCCAAAGGTTACATCTTGGTGTTTTCAGAAGTGATATGTCT | + |
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Preference number: 1 (lower is better) Translates to: IPVSLLCGGFLQLLA*AQRLHLGVFRSDMS Trigger: AGACATATCACTTCTGAAAACACCAAGATGTAACCTTTGGGCCCAAGCCAGAAGCTGCAGGAAGCCTCCACATAGAAGGGAGACTGGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR TCA 90 bp | GGAAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTaGCTAGAGGAATTTTTGTTTGCTTTCCCATTTGCTGGGCACTTC | + |
|
Preference number: 1 (lower is better) Translates to: GSSLSMPFMELLLVE*LEEFLFAFPFAGHF Trigger: GAAGTGCCCAGCAAATGGGAAAGCAAACAAAAATTCCTCTAGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR TCA 90 bp | GGCTTTCCTCCAATGAAATCTCTGAAATGGTCTACTCGTAGATACTaGGGGCTTGCCTTTGCATCAGCAGTCAGCATGGTAAAGTGCAAG | + |
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Preference number: 1 (lower is better) Translates to: GFPPMKSLKWSTRRY*GLAFASAVSMVKCK Trigger: CTTGCACTTTACCATGCTGACTGCTGATGCAAAGGCAAGCCCTCAGTATCTACGAGTAGACCATTTCAGAGATTTCATTGGAGGAAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR TCA 90 bp | AACAAAGGTGGCCATGGGCCAGCCTCTGAGTCCCTGTTCCTTTACTaGCCCATTAAATCTAAACAACTAACACAGCCCAGGACAAGAAAT | + |
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Preference number: 1 (lower is better) Translates to: NKGGHGPASESLFLY*PIKSKQLTQPRTRN Trigger: ATTTCTTGTCCTGGGCTGTGTTAGTTGTTTAGATTTAATGGGTCAGTAAAGGAACAGGGACTCAGAGGCTGGCCCATGGCCACCTTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR GCA 90 bp | ATTGCTTGTGGAGTGACTAGAGGAATTTTTGTTTGCTTTCCCATTTaGTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACT | + |
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Preference number: 1 (lower is better) Translates to: IACGVTRGIFVCFPI*WALPKRQAVPGLST Trigger: AGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGGGAAAGCAAACAAAAATTCCTCTAGTCACTCCACAAGCAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR CCA 90 bp | CCAGGTCCTATGCTCAATCCCCAGCATGCATCTGCAGGTGACACATaGGTACACATGCACGCAACCAACAAAGAACTCATTTTAAAGATA | + |
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Preference number: 1 (lower is better) Translates to: PGPMLNPQHASAGDT*VHMHATNKELILKI Trigger: TATCTTTAAAATGAGTTCTTTGTTGGTTGCGTGCATGTGTACCCATGTGTCACCTGCAGATGCATGCTGGGGATTGAGCATAGGACCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR CCA 90 bp | CACAGAACATTTCAAATAGCAGCAGGTGTTGGTGCTGCTAAAATGTaGAAAGATCCAGACTTTGGCACCAGGAGCTACAGCACCAGAAGA | + |
|
Preference number: 1 (lower is better) Translates to: HRTFQIAAGVGAAKM*KDPDFGTRSYSTRR Trigger: TCTTCTGGTGCTGTAGCTCCTGGTGCCAAAGTCTGGATCTTTCCACATTTTAGCAGCACCAACACCTGCTGCTATTTGAAATGTTCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR GCA 90 bp | TTTCATGGAGCTATTGCTTGTGGAGTGACTAGAGGAATTTTTGTTTaGTTTCCCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCG | + |
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Preference number: 1 (lower is better) Translates to: FHGAIACGVTRGIFV*FPICWALPKRQAVP Trigger: CGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGGGAAAGCAAACAAAAATTCCTCTAGTCACTCCACAAGCAATAGCTCCATGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR TCA 90 bp | AAAAGAGATGTACCAGATCTGTCTGTTTCTGATGCCTTTGGAAGGTaGGCTGAAAGCTGGCGTTGGAGGATGATGTCATTCCATTTGGTA | + |
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Preference number: 1 (lower is better) Translates to: KRDVPDLSVSDAFGR*AESWRWRMMSFHLV Trigger: TACCAAATGGAATGACATCATCCTCCAACGCCAGCTTTCAGCTCACCTTCCAAAGGCATCAGAAACAGACAGATCTGGTACATCTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR TCA 90 bp | AAGCACTGTCAGGAAAGTGGGTCTTTTAGTGGGGAATATTTGGCTTaGTTAGACAATGGTTTGAATACCAGTCTCCCTTCTATGTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: KHCQESGSFSGEYLA*LDNGLNTSLPSMWR Trigger: CCTCCACATAGAAGGGAGACTGGTATTCAAACCATTGTCTAATCAAGCCAAATATTCCCCACTAAAAGACCCACTTTCCTGACAGTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR CCA 90 bp | ACTATCTTAGTTGTCTATCAAGTTGGGATGTGGAGGCAAGACACATaGCAATGCCCTCAGGTTAGCAAAACTCCATTAAAACAGAAGTGC | + |
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Preference number: 1 (lower is better) Translates to: TILVVYQVGMWRQDT*QCPQVSKTPLKQKC Trigger: GCACTTCTGTTTTAATGGAGTTTTGCTAACCTGAGGGCATTGCCATGTGTCTTGCCTCCACATCCCAACTTGATAGACAACTAAGATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGCTGTGCCCTGCTTTCCAGAGGCAGGTTCTGGCCTCTCTGGTCCCGTGCTTGAAGCCAGAGCCACCTaGCTGGGCAGGTGTAGACCA | + |
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Preference number: 2 (lower is better) Translates to: VAVPCFPEAGSGLSGPVLEARAT*LGRCRP Trigger: TGGTCTACACCTGCCCAGGCAGGTGGCTCTGGCTTC...AAGCACGGGACCAGAGAGGCCAGAACCTGCCTCTGGAAAGCAGGGCACAGCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGCTGTGCCCTGCTTTCCAGAGGCAGGTTCTGGCCTCTCTGGTCCCGTGCTTCTTAGCTTCCTGGCCTaGCACCCTGCAGCCTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: VAVPCFPEAGSGLSGPVLLSFLA*HPAAFS Trigger: AGAAAAGGCTGCAGGGTGGCAGGCCAGGAAGCTAAG...AAGCACGGGACCAGAGAGGCCAGAACCTGCCTCTGGAAAGCAGGGCACAGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTGGGAAGCAGCAGTGGCAGAACACCTGCCTTGCACACCAGGTCCTATGCTCAGAGAGGACTACTCATaGATCAGGGAAAGCTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: SWEAAVAEHLPCTPGPMLREDYS*IRESWA Trigger: GGCCCAGCTTTCCCTGATGCATGAGTAGTCCTCTCT...GAGCATAGGACCTGGTGTGCAAGGCAGGTGTTCTGCCACTGCTGCTTCCCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGGAAGCAGCAGTGGCAGAACACCTGCCTTGCACACCAGGTCCTATGCTCTGCCAGCAGCAGTGTTaGTGCCCAGGAAAAGAGATG | + |
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Preference number: 2 (lower is better) Translates to: SWEAAVAEHLPCTPGPMLCQQQC*CPGKEM Trigger: CATCTCTTTTCCTGGGCACCAACACTGCTGCTGGCA...GAGCATAGGACCTGGTGTGCAAGGCAGGTGTTCTGCCACTGCTGCTTCCCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR CAA 90 bp | AGAACTCATTCTGAGCTGGGAAGCAGCAGTGGCAGAACACCTGCCTaGCACACCAGGTCCTATGCTCAATCCCCAGCATGCATCTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: RTHSELGSSSGRTPA*HTRSYAQSPACICR Trigger: CCTGCAGATGCATGCTGGGGATTGAGCATAGGACCTGGTGTGCAAGGCAGGTGTTCTGCCACTGCTGCTTCCCAGCTCAGAATGAGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGCTGTGCCCTGCTTTCCAGAGGCAGGTTCTGGCCTCTCTGGTCCCGTGCTTACACATGGGTACACATaGACGCAACCAACAAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: VAVPCFPEAGSGLSGPVLTHGYT*TQPTKN Trigger: GTTCTTTGTTGGTTGCGTGCATGTGTACCCATGTGT...AAGCACGGGACCAGAGAGGCCAGAACCTGCCTCTGGAAAGCAGGGCACAGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTGGGAAGCAGCAGTGGCAGAACACCTGCCTTGCACACCAGGTCCTATGCTCGAAGCAGTCTGTCCATaGCTTTCATGGAGCTATTGC | + |
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Preference number: 2 (lower is better) Translates to: SWEAAVAEHLPCTPGPMLEAVCP*LSWSYC Trigger: GCAATAGCTCCATGAAAGGCATGGACAGACTGCTTC...GAGCATAGGACCTGGTGTGCAAGGCAGGTGTTCTGCCACTGCTGCTTCCCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGGAGAGTGGCAGGGGGCACTGCAAGTGAGAGGTTGCAGCCTTGAATTAAGGCCTTTGTGTCTAGCCTaGTTAACTGGCCTTGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: TGEWQGALQVRGCSLELRPLCLA*LTGLGS Trigger: GGACCCAAGGCCAGTTAACCAGGCTAGACACAAAGG...CCTTAATTCAAGGCTGCAACCTCTCACTTGCAGTGCCCCCTGCCACTCTCCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGGAGAGTGGCAGGGGGCACTGCAAGTGAGAGGTTGCAGCCTTGAATTAAGGAATGATGAAGTCAGCTaGAGTTTCCAGCCCCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: TGEWQGALQVRGCSLELRNDEVS*SFQPPE Trigger: CTCTGGGGGCTGGAAACTTCAGCTGACTTCATCATT...CCTTAATTCAAGGCTGCAACCTCTCACTTGCAGTGCCCCCTGCCACTCTCCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGCTTTCCCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTGGTTAACTGGCCTTaGGTCCTTCACAGGCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: FAFPFAGHFLKDRLCRVCLVNWP*VLHRPG Trigger: TCCTGGCCTGTGAAGGACCCAAGGCCAGTTAACCAG...ACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGGGAAAGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR-3UTR TCA 90 bp | AGCTGGGAAGCAGCAGTGGCAGAACACCTGCCTTGCACACCAGGTCCTATGCTCAAAGATAGGGAAAACTaGGGCTTCAAGAAGACTTGC | + |
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Preference number: 2 (lower is better) Translates to: SWEAAVAEHLPCTPGPMLKDREN*GFKKTC Trigger: GCAAGTCTTCTTGAAGCCTCAGTTTTCCCTATCTTT...GAGCATAGGACCTGGTGTGCAAGGCAGGTGTTCTGCCACTGCTGCTTCCCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGGGAAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTCCTTTGTGTCTAGCCTaGTTAACTGGCCTTGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: GGKQSVHAFHGAIACGVTPLCLA*LTGLGS Trigger: GGACCCAAGGCCAGTTAACCAGGCTAGACACAAAGG...AGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTTCCCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR-3UTR CCA 90 bp | AGACAATGGTTTGAATACCAGTCTCCCTTCTATGTGGAGGCTTCCTGCAGCTTCTTCCCCCACAGGGGATaGAGGAGCAAAGGGAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: RQWFEYQSPFYVEASCSFFPHRG*RSKGRE Trigger: TTCCCTCCCTTTGCTCCTCCATCCCCTGTGGGGGAA...GAAGCTGCAGGAAGCCTCCACATAGAAGGGAGACTGGTATTCAAACCATTGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR-3UTR GCA 90 bp | GTAGCTTCCCATTTGGGAGTCAAAGAATGGTCCATGCTACCTTGGGGACAGAGAAGAGAGGACTACTCATaGATCAGGGAAAGCTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: VASHLGVKEWSMLPWGQRREDYS*IRESWA Trigger: GGCCCAGCTTTCCCTGATGCATGAGTAGTCCTCTCT...TCTCTGTCCCCAAGGTAGCATGGACCATTCTTTGACTCCCAAATGGGAAGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR-3UTR CCA 90 bp | AGACAATGGTTTGAATACCAGTCTCCCTTCTATGTGGAGGCTTCCTGCAGCTTCCTGGTTAACTGGCCTTaGGTCCTTCACAGGCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: RQWFEYQSPFYVEASCSFLVNWP*VLHRPG Trigger: TCCTGGCCTGTGAAGGACCCAAGGCCAGTTAACCAG...GAAGCTGCAGGAAGCCTCCACATAGAAGGGAGACTGGTATTCAAACCATTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGGAGAGTGGCAGGGGGCACTGCAAGTGAGAGGTTGCAGCCTTGAATTAAGGTGTCCATGCCTTTCATaGAGCTATTGCTTGTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: TGEWQGALQVRGCSLELRCPCLS*SYCLWS Trigger: ACTCCACAAGCAATAGCTCCATGAAAGGCATGGACA...CCTTAATTCAAGGCTGCAACCTCTCACTTGCAGTGCCCCCTGCCACTCTCCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTTCAGAAGATTCAGCAACAAGCAAACAGTTCTTAACTCCCCGTGTGGTCAGTTCCCCCACAGGGGATaGAGGAGCAAAGGGAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: CFRRFSNKQTVLNSPCGQFPHRG*RSKGRE Trigger: TTCCCTCCCTTTGCTCCTCCATCCCCTGTGGGGGAA...CTGACCACACGGGGAGTTAAGAACTGTTTGCTTGTTGCTGAATCTTCTGAAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR-3UTR CCA 90 bp | AGACAATGGTTTGAATACCAGTCTCCCTTCTATGTGGAGGCTTCCTGCAGCTTCGTTATTCCTGTCCCTTaGGGGCTGGGGGAAGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: RQWFEYQSPFYVEASCSFVIPVP*GLGEAN Trigger: GTTTGCTTCCCCCAGCCCCCAAGGGACAGGAATAAC...GAAGCTGCAGGAAGCCTCCACATAGAAGGGAGACTGGTATTCAAACCATTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGGAGAGTGGCAGGGGGCACTGCAAGTGAGAGGTTGCAGCCTTGAATTAAGGAGTTGTCTATCAAGTTaGGATGTGGAGGCAAGACAC | + |
|
Preference number: 2 (lower is better) Translates to: TGEWQGALQVRGCSLELRSCLSS*DVEARH Trigger: GTGTCTTGCCTCCACATCCCAACTTGATAGACAACT...CCTTAATTCAAGGCTGCAACCTCTCACTTGCAGTGCCCCCTGCCACTCTCCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGAGCCACAGACTTAATTTCCTATACTCTTCAGTGGACCACCACAGGGGTCTGATTGGTACAGGAGAGTaGCAGGGGGCACTGCAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: KSHRLNFLYSSVDHHRGLIGTGE*QGALQV Trigger: CACTTGCAGTGCCCCCTGCCACTCTCCTGTACCAAT...CAGACCCCTGTGGTGGTCCACTGAAGAGTATAGGAAATTAAGTCTGTGGCTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR TCA 90 bp | AGACAATGGTTTGAATACCAGTCTCCCTTCTATGTGGAGGCTTCCTGCAGCTTCACTACTCAGTCCTCCTaGGGATGTCCTGTGTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: RQWFEYQSPFYVEASCSFTTQSS*GCPVSS Trigger: GGAAGACACAGGACATCCTCAGGAGGACTGAGTAGT...GAAGCTGCAGGAAGCCTCCACATAGAAGGGAGACTGGTATTCAAACCATTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGAGCCACAGACTTAATTTCCTATACTCTTCAGTGGACCACCACAGGGGTCTGACTACTCAGTCCTCCTaGGGATGTCCTGTGTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: KSHRLNFLYSSVDHHRGLTTQSS*GCPVSS Trigger: GGAAGACACAGGACATCCTCAGGAGGACTGAGTAGT...CAGACCCCTGTGGTGGTCCACTGAAGAGTATAGGAAATTAAGTCTGTGGCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CCA 90 bp | GTAGCTTCCCATTTGGGAGTCAAAGAATGGTCCATGCTACCTTGGGGACAGAGACTGGGCCTGAGTGACTaGTTTGTAGTCTCTGATCCT | + |
|
Preference number: 2 (lower is better) Translates to: VASHLGVKEWSMLPWGQRLGLSD*FVVSDP Trigger: AGGATCAGAGACTACAAACCAGTCACTCAGGCCCAG...TCTCTGTCCCCAAGGTAGCATGGACCATTCTTTGACTCCCAAATGGGAAGCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGGAGAGTGGCAGGGGGCACTGCAAGTGAGAGGTTGCAGCCTTGAATTAAGGTCAACAGGCAGGTATTaGCTTTCCTCCAATGAAATC | + |
|
Preference number: 2 (lower is better) Translates to: TGEWQGALQVRGCSLELRSTGRY*LSSNEI Trigger: GATTTCATTGGAGGAAAGCCAATACCTGCCTGTTGA...CCTTAATTCAAGGCTGCAACCTCTCACTTGCAGTGCCCCCTGCCACTCTCCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CCA 90 bp | AGACAATGGTTTGAATACCAGTCTCCCTTCTATGTGGAGGCTTCCTGCAGCTTCTGGAGGCAAGACACATaGCAATGCCCTCAGGTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: RQWFEYQSPFYVEASCSFWRQDT*QCPQVS Trigger: GCTAACCTGAGGGCATTGCCATGTGTCTTGCCTCCA...GAAGCTGCAGGAAGCCTCCACATAGAAGGGAGACTGGTATTCAAACCATTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCCTAAAAGGCTTAATGCACTTTGAACTGCATAAATCTGAGGCCCTCAACAGGCCCAGAGAGGAAAGGTaGTGCCAGCAGCAGTGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: FLKGLMHFELHKSEALNRPREER*CQQQCW Trigger: CCAACACTGCTGCTGGCATCACCTTTCCTCTCTGGG...CCTGTTGAGGGCCTCAGATTTATGCAGTTCAAAGTGCATTAAGCCTTTTAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR GCA 90 bp | AGACAATGGTTTGAATACCAGTCTCCCTTCTATGTGGAGGCTTCCTGCAGCTTCCAGCAGCAGTGTTGGTaGCCAGGAAAAGAGATGTAC | + |
|
Preference number: 2 (lower is better) Translates to: RQWFEYQSPFYVEASCSFQQQCW*PGKEMY Trigger: GTACATCTCTTTTCCTGGGCACCAACACTGCTGCTG...GAAGCTGCAGGAAGCCTCCACATAGAAGGGAGACTGGTATTCAAACCATTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCTTCAGAAGATTCAGCAACAAGCAAACAGTTCTTAACTCCCCGTGTGGTCAGGTCAGCATGGTAAAGTaGAAGGTTTCCCCCACAGGG | + |
|
Preference number: 2 (lower is better) Translates to: CFRRFSNKQTVLNSPCGQVSMVK*KVSPTG Trigger: CCCTGTGGGGGAAACCTTGCACTTTACCATGCTGAC...CTGACCACACGGGGAGTTAAGAACTGTTTGCTTGTTGCTGAATCTTCTGAAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR CAA 90 bp | GAGGAGACAAATCAGGGTATCAAACACAGCAAAAGGGACTGGGCTTaGATATACAAACTGCTTACCATGGAGCAGAGGAGAGGGCTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: EETNQGIKHSKRDWA*IYKLLTMEQRRGLW Trigger: CCAAAGCCCTCTCCTCTGCTCCATGGTAAGCAGTTTGTATATCAAAGCCCAGTCCCTTTTGCTGTGTTTGATACCCTGATTTGTCTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR CAA 90 bp | GTGGAGGCTTCCTGCAGCTTCTGGCTTGGGCCCAAAGGTTACATCTaGGTGTTTTCAGAAGTGATATGTCTTTCGACCTTGAAATCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: VEASCSFWLGPKGYI*VFSEVICLSTLKSE Trigger: CTCTGATTTCAAGGTCGAAAGACATATCACTTCTGAAAACACCAAGATGTAACCTTTGGGCCCAAGCCAGAAGCTGCAGGAAGCCTCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGAGCCACAGACTTAATTTCCTATACTCTTCAGTGGACCACCACAGGGGTCTGACAGACTCATCCCCATaGCAGACACATGAGGAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: KSHRLNFLYSSVDHHRGLTDSSP*QTHEEK Trigger: CTTTTCCTCATGTGTCTGTCATGGGGATGAGTCTGT...CAGACCCCTGTGGTGGTCCACTGAAGAGTATAGGAAATTAAGTCTGTGGCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR GCA 90 bp | GCCCCTCTGTTTTTATCAGCAGAGAAGAGCCACAGACTTAATTTCCTATACTCTCAGTGGCAGAACACCTaGCTTGCACACCAGGTCCTA | + |
|
Preference number: 2 (lower is better) Translates to: APLFLSAEKSHRLNFLYSQWQNT*LAHQVL Trigger: TAGGACCTGGTGTGCAAGGCAGGTGTTCTGCCACTG...AGAGTATAGGAAATTAAGTCTGTGGCTCTTCTCTGCTGATAAAAACAGAGGGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGGAGAGTGGCAGGGGGCACTGCAAGTGAGAGGTTGCAGCCTTGAATTAAGGGTCTCTGATCCTATCTaGACAACTGACAAAAATTAC | + |
|
Preference number: 2 (lower is better) Translates to: TGEWQGALQVRGCSLELRVSDPI*TTDKNY Trigger: GTAATTTTTGTCAGTTGTCCAGATAGGATCAGAGAC...CCTTAATTCAAGGCTGCAACCTCTCACTTGCAGTGCCCCCTGCCACTCTCCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CCA 90 bp | GCCTTAAGAGGTCATCCACTCTATAGAACTCATTCTGAGCTGGGAAGCAGCAGTCAGAGGAGAGGGCTTTaGCTACCTCTATATGGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: ALRGHPLYRTHSELGSSSQRRGL*LPLYGS Trigger: ACTACCATATAGAGGTAGCCAAAGCCCTCTCCTCTG...ACTGCTGCTTCCCAGCTCAGAATGAGTTCTATAGAGTGGATGACCTCTTAAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CCA 90 bp | AGACAATGGTTTGAATACCAGTCTCCCTTCTATGTGGAGGCTTCCTGCAGCTTCCAGAGGAGAGGGCTTTaGCTACCTCTATATGGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: RQWFEYQSPFYVEASCSFQRRGL*LPLYGS Trigger: ACTACCATATAGAGGTAGCCAAAGCCCTCTCCTCTG...GAAGCTGCAGGAAGCCTCCACATAGAAGGGAGACTGGTATTCAAACCATTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGAGCCACAGACTTAATTTCCTATACTCTTCAGTGGACCACCACAGGGGTCTGGCTGAAAGCTGGCGTTaGAGGATGATGTCATTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: KSHRLNFLYSSVDHHRGLAESWR*RMMSFH Trigger: ATGGAATGACATCATCCTCCAACGCCAGCTTTCAGC...CAGACCCCTGTGGTGGTCCACTGAAGAGTATAGGAAATTAAGTCTGTGGCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCCTAAAAGGCTTAATGCACTTTGAACTGCATAAATCTGAGGCCCTCAACAGGAGAGAGGACTACTCATaGATCAGGGAAAGCTGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: FLKGLMHFELHKSEALNRREDYS*IRESWA Trigger: GGCCCAGCTTTCCCTGATGCATGAGTAGTCCTCTCT...CCTGTTGAGGGCCTCAGATTTATGCAGTTCAAAGTGCATTAAGCCTTTTAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CCA 90 bp | CCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTGTCTCTGATCCTATCTaGACAACTGACAAAAATTAC | + |
|
Preference number: 2 (lower is better) Translates to: PFAGHFLKDRLCRVCLLSVSDPI*TTDKNY Trigger: GTAATTTTTGTCAGTTGTCCAGATAGGATCAGAGAC...ACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CCA 90 bp | GCCTTAAGAGGTCATCCACTCTATAGAACTCATTCTGAGCTGGGAAGCAGCAGTTGCTTTCCCATTTGCTaGGCACTTCCTAAAAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: ALRGHPLYRTHSELGSSSCFPIC*ALPKRQ Trigger: CTGTCTTTTAGGAAGTGCCCAGCAAATGGGAAAGCA...ACTGCTGCTTCCCAGCTCAGAATGAGTTCTATAGAGTGGATGACCTCTTAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGAGCCACAGACTTAATTTCCTATACTCTTCAGTGGACCACCACAGGGGTCTGTATCAAGTTGGGATGTaGAGGCAAGACACATGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: KSHRLNFLYSSVDHHRGLYQVGM*RQDTWQ Trigger: TTGCCATGTGTCTTGCCTCCACATCCCAACTTGATA...CAGACCCCTGTGGTGGTCCACTGAAGAGTATAGGAAATTAAGTCTGTGGCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGTGTTTTCAGAAGTGATATGTCTTTCGACCTTGAAATCAGAGTCAGTCTACTGGTTAACTGGCCTTaGGTCCTTCACAGGCCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LGVFRSDMSFDLEIRVSLLVNWP*VLHRPG Trigger: TCCTGGCCTGTGAAGGACCCAAGGCCAGTTAACCAG...TAGACTGACTCTGATTTCAAGGTCGAAAGACATATCACTTCTGAAAACACCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGTGTTTTCAGAAGTGATATGTCTTTCGACCTTGAAATCAGAGTCAGTCTAATTGGTACAGGAGAGTaGCAGGGGGCACTGCAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: LGVFRSDMSFDLEIRVSLIGTGE*QGALQV Trigger: CACTTGCAGTGCCCCCTGCCACTCTCCTGTACCAAT...TAGACTGACTCTGATTTCAAGGTCGAAAGACATATCACTTCTGAAAACACCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTGGTGTTTTCAGAAGTGATATGTCTTTCGACCTTGAAATCAGAGTCAGTCTACTTTGGAAGGTGAGCTaGAAGCTGGCGTTGGAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: LGVFRSDMSFDLEIRVSLLWKVS*KLALED Trigger: ATCCTCCAACGCCAGCTTTCAGCTCACCTTCCAAAG...TAGACTGACTCTGATTTCAAGGTCGAAAGACATATCACTTCTGAAAACACCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR TCA 90 bp | GCCTTAAGAGGTCATCCACTCTATAGAACTCATTCTGAGCTGGGAAGCAGCAGTAGGATCCCTTTGAGTTaGAACAATGCTTCAGAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: ALRGHPLYRTHSELGSSSRIPLS*NNASED Trigger: ATCTTCTGAAGCATTGTTTCAACTCAAAGGGATCCT...ACTGCTGCTTCCCAGCTCAGAATGAGTTCTATAGAGTGGATGACCTCTTAAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR TCA 90 bp | GCCCCTCTGTTTTTATCAGCAGAGAAGAGCCACAGACTTAATTTCCTATACTCTACAGACTCATCCCCATaGCAGACACATGAGGAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: APLFLSAEKSHRLNFLYSTDSSP*QTHEEK Trigger: CTTTTCCTCATGTGTCTGTCATGGGGATGAGTCTGT...AGAGTATAGGAAATTAAGTCTGTGGCTCTTCTCTGCTGATAAAAACAGAGGGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCTTCAGAAGATTCAGCAACAAGCAAACAGTTCTTAACTCCCCGTGTGGTCAGGTTTGCTTTCCCATTTaGTGGGCACTTCCTAAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: CFRRFSNKQTVLNSPCGQVCFPI*WALPKR Trigger: TCTTTTAGGAAGTGCCCAGCAAATGGGAAAGCAAAC...CTGACCACACGGGGAGTTAAGAACTGTTTGCTTGTTGCTGAATCTTCTGAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCTTCAGAAGATTCAGCAACAAGCAAACAGTTCTTAACTCCCCGTGTGGTCAGCACAGCAAAAGGGACTaGGCTTTGATATACAAACTG | + |
|
Preference number: 2 (lower is better) Translates to: CFRRFSNKQTVLNSPCGQHSKRD*ALIYKL Trigger: CAGTTTGTATATCAAAGCCCAGTCCCTTTTGCTGTG...CTGACCACACGGGGAGTTAAGAACTGTTTGCTTGTTGCTGAATCTTCTGAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGTGTTTTCAGAAGTGATATGTCTTTCGACCTTGAAATCAGAGTCAGTCTACTGTCCCTTGGGGGCTaGGGGAAGCAAACAAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: LGVFRSDMSFDLEIRVSLLSLGG*GKQTNK Trigger: TTTGTTTGTTTGCTTCCCCCAGCCCCCAAGGGACAG...TAGACTGACTCTGATTTCAAGGTCGAAAGACATATCACTTCTGAAAACACCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGAGCCACAGACTTAATTTCCTATACTCTTCAGTGGACCACCACAGGGGTCTGGTCTCTGATCCTATCTaGACAACTGACAAAAATTAC | + |
|
Preference number: 2 (lower is better) Translates to: KSHRLNFLYSSVDHHRGLVSDPI*TTDKNY Trigger: GTAATTTTTGTCAGTTGTCCAGATAGGATCAGAGAC...CAGACCCCTGTGGTGGTCCACTGAAGAGTATAGGAAATTAAGTCTGTGGCTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCCTAAAAGGCTTAATGCACTTTGAACTGCATAAATCTGAGGCCCTCAACAGGTCTGTCTACTCAGTGTaGGGATTTCCTAAGAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: FLKGLMHFELHKSEALNRSVYSV*GFPKRR Trigger: TCTCCTCTTAGGAAATCCCCACACTGAGTAGACAGA...CCTGTTGAGGGCCTCAGATTTATGCAGTTCAAAGTGCATTAAGCCTTTTAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTGGTGTTTTCAGAAGTGATATGTCTTTCGACCTTGAAATCAGAGTCAGTCTAACAAGGGCAGATAAGTaGCAGTGTGTGTGTGCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: LGVFRSDMSFDLEIRVSLTRADK*QCVCAK Trigger: CTTAGCACACACACACTGGCACTTATCTGCCCTTGT...TAGACTGACTCTGATTTCAAGGTCGAAAGACATATCACTTCTGAAAACACCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCCTAAAAGGCTTAATGCACTTTGAACTGCATAAATCTGAGGCCCTCAACAGGATTCCATTTGGTAGCTaGCTCTGTCTCCATGAAACT | + |
|
Preference number: 2 (lower is better) Translates to: FLKGLMHFELHKSEALNRIPFGS*LCLHET Trigger: AGTTTCATGGAGACAGAGCCAGCTACCAAATGGAAT...CCTGTTGAGGGCCTCAGATTTATGCAGTTCAAAGTGCATTAAGCCTTTTAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CCA 90 bp | AGACAATGGTTTGAATACCAGTCTCCCTTCTATGTGGAGGCTTCCTGCAGCTTCATAAAATCTACTTTATaGCAGGACTACAAAGTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: RQWFEYQSPFYVEASCSFIKSTL*QDYKVC Trigger: GCACACTTTGTAGTCCTGCCATAAAGTAGATTTTAT...GAAGCTGCAGGAAGCCTCCACATAGAAGGGAGACTGGTATTCAAACCATTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTGGTGTTTTCAGAAGTGATATGTCTTTCGACCTTGAAATCAGAGTCAGTCTAGGCTTCAAGAAGACTTaGCAAAGATCACAGAGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: LGVFRSDMSFDLEIRVSLGFKKT*QRSQSK Trigger: CTTGCTCTGTGATCTTTGGCAAGTCTTCTTGAAGCC...TAGACTGACTCTGATTTCAAGGTCGAAAGACATATCACTTCTGAAAACACCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTGGTGTTTTCAGAAGTGATATGTCTTTCGACCTTGAAATCAGAGTCAGTCTAACACATGGGTACACATaGACGCAACCAACAAAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: LGVFRSDMSFDLEIRVSLTHGYT*TQPTKN Trigger: GTTCTTTGTTGGTTGCGTGCATGTGTACCCATGTGT...TAGACTGACTCTGATTTCAAGGTCGAAAGACATATCACTTCTGAAAACACCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGTGTTTTCAGAAGTGATATGTCTTTCGACCTTGAAATCAGAGTCAGTCTATCTGTCTACTCAGTGTaGGGATTTCCTAAGAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: LGVFRSDMSFDLEIRVSLSVYSV*GFPKRR Trigger: TCTCCTCTTAGGAAATCCCCACACTGAGTAGACAGA...TAGACTGACTCTGATTTCAAGGTCGAAAGACATATCACTTCTGAAAACACCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGTGTTTTCAGAAGTGATATGTCTTTCGACCTTGAAATCAGAGTCAGTCTAATTCCATTTGGTAGCTaGCTCTGTCTCCATGAAACT | + |
|
Preference number: 2 (lower is better) Translates to: LGVFRSDMSFDLEIRVSLIPFGS*LCLHET Trigger: AGTTTCATGGAGACAGAGCCAGCTACCAAATGGAAT...TAGACTGACTCTGATTTCAAGGTCGAAAGACATATCACTTCTGAAAACACCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR CAA 90 bp | AATGACATCTACTTCACAAAGGTAGCCAAAGAGGATCCCTTTGAGTaGAAACAATGCTTCAGAAGATTCAGCAACAAGCAAACAGTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: NDIYFTKVAKEDPFE*KQCFRRFSNKQTVL Trigger: AAGAACTGTTTGCTTGTTGCTGAATCTTCTGAAGCATTGTTTCAACTCAAAGGGATCCTCTTTGGCTACCTTTGTGAAGTAGATGTCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR CCA 72 bp | TCTAGGCACCGGCCCCTGCCACTTGAGAGGGATGGCTaGTGTGCAAGCTTGCCTGTAGCCTTGGTCCCACAC | + |
|
Preference number: 3 (lower is better) Translates to: SRHRPLPLERDG*CASLPVALVPH Trigger: GTGTGGGACCAAGGCTACAGGCAAGCTTGCACACCAGCCATCCCTCTCAAGTGGCAGGGGCCGGTGCCTAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR CCA 72 bp | CTCCCAGCCAAGGCCTTTGTGTCTAGCCTGGTTAACTaGCCTTGGGTCCTTCACAGGCCAGGATTGGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LPAKAFVSSLVN*PWVLHRPGLGR Trigger: CCTCCCCAATCCTGGCCTGTGAAGGACCCAAGGCCAGTTAACCAGGCTAGACACAAAGGCCTTGGCTGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR GCA 72 bp | CAACTATACACATGCACCCAAGGAGCCCTGAGCCACTaGCTGTGGCTGTGCCCTGCTTTCCAGAGGCAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: QLYTCTQGALSH*LWLCPAFQRQV Trigger: AACCTGCCTCTGGAAAGCAGGGCACAGCCACAGGCAGTGGCTCAGGGCTCCTTGGGTGCATGTGTATAGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCTGGGAAGCAGCAGTGGCAGAACACCTGCCTTGCACACCAGGTCCTATGCTCTCCCAGCCAAGGCCTTaGTGTCTAGCCTGGTTAACT | + |
|
Preference number: 3 (lower is better) Translates to: SWEAAVAEHLPCTPGPMLSQPRP*CLAWLT Trigger: AGTTAACCAGGCTAGACACAAAGGCCTTGGCTGGGA...GAGCATAGGACCTGGTGTGCAAGGCAGGTGTTCTGCCACTGCTGCTTCCCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGGCTGTGCCCTGCTTTCCAGAGGCAGGTTCTGGCCTCTCTGGTCCCGTGCTTATTCTTAGTGTGTTCTaGGTGGGGGTAGAGGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: VAVPCFPEAGSGLSGPVLILSVF*VGVEVS Trigger: AGACACCTCTACCCCCACCAAGAACACACTAAGAAT...AAGCACGGGACCAGAGAGGCCAGAACCTGCCTCTGGAAAGCAGGGCACAGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGGCTGTGCCCTGCTTTCCAGAGGCAGGTTCTGGCCTCTCTGGTCCCGTGCTTATGATGTCATTCCATTaGGTAGCTGGCTCTGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: VAVPCFPEAGSGLSGPVLMMSFH*VAGSVS Trigger: GGAGACAGAGCCAGCTACCAAATGGAATGACATCAT...AAGCACGGGACCAGAGAGGCCAGAACCTGCCTCTGGAAAGCAGGGCACAGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR GCA 72 bp | GACAAGAAATCCACTATTGCTCTAGGCACCGGCCCCTaGCACTTGAGAGGGATGGCTGGTGTGCAAGCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: DKKSTIALGTGP*HLRGMAGVQAC Trigger: GCAAGCTTGCACACCAGCCATCCCTCTCAAGTGGCAGGGGCCGGTGCCTAGAGCAATAGTGGATTTCTTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR GCA 72 bp | GGGCTTGCCTTTGCATCAGCAGTCAGCATGGTAAAGTaGAAGGTTTCCCCCACAGGGGATGGAGGAGCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GLAFASAVSMVK*KVSPTGDGGAK Trigger: CTTTGCTCCTCCATCCCCTGTGGGGGAAACCTTGCACTTTACCATGCTGACTGCTGATGCAAAGGCAAGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR CCA 72 bp | TCTACAGTCTCCCAGCCAAGGCCTTTGTGTCTAGCCTaGTTAACTGGCCTTGGGTCCTTCACAGGCCAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: STVSQPRPLCLA*LTGLGSFTGQD Trigger: ATCCTGGCCTGTGAAGGACCCAAGGCCAGTTAACCAGGCTAGACACAAAGGCCTTGGCTGGGAGACTGTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR GCA 72 bp | GGATGGCTGAGTCTGATGCAGACAAGGGCAGATAAGTaGCAGTGTGTGTGTGCTAAGAAGGGTGAAGGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GWLSLMQTRADK*QCVCAKKGEGR Trigger: TCTCCCTTCACCCTTCTTAGCACACACACACTGGCACTTATCTGCCCTTGTCTGCATCAGACTCAGCCATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGAGAGTGGCAGGGGGCACTGCAAGTGAGAGGTTGCAGCCTTGAATTAAGGCTGTTTCTGATGCCTTaGGAAGGTGAGCTGAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TGEWQGALQVRGCSLELRLFLMP*EGELKA Trigger: AGCTTTCAGCTCACCTTCCAAAGGCATCAGAAACAG...CCTTAATTCAAGGCTGCAACCTCTCACTTGCAGTGCCCCCTGCCACTCTCCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGGCTGTGCCCTGCTTTCCAGAGGCAGGTTCTGGCCTCTCTGGTCCCGTGCTTTGGGGAATATTTGGCTaGATTAGACAATGGTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: VAVPCFPEAGSGLSGPVLWGIFG*IRQWFE Trigger: TTCAAACCATTGTCTAATCAAGCCAAATATTCCCCA...AAGCACGGGACCAGAGAGGCCAGAACCTGCCTCTGGAAAGCAGGGCACAGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR TCA 72 bp | GTGGCAGGGGGCACTGCAAGTGAGAGGTTGCAGCCTTaGATTAAGGAGTTTCTGGCCAGTAACCTAAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: VAGGTASERLQP*IKEFLASNLKA Trigger: TGCTTTTAGGTTACTGGCCAGAAACTCCTTAATTCAAGGCTGCAACCTCTCACTTGCAGTGCCCCCTGCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR GCA 72 bp | CACACAGATCTCTTCAACTCATTTGAACTGTCTCACTaGCTCAGAGTTGTCTTAGCTTCCTGGCCTGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: HTDLFNSFELSH*LRVVLASWPAT Trigger: GGTGGCAGGCCAGGAAGCTAAGACAACTCTGAGGCAGTGAGACAGTTCAAATGAGTTGAAGAGATCTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR CCA 72 bp | TCCCTTCTATGTGGAGGCTTCCTGCAGCTTCTGGCTTaGGCCCAAAGGTTACATCTTGGTGTTTTCAGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SLLCGGFLQLLA*AQRLHLGVFRS Trigger: ACTTCTGAAAACACCAAGATGTAACCTTTGGGCCCAAGCCAGAAGCTGCAGGAAGCCTCCACATAGAAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CAA 90 bp | AGACAATGGTTTGAATACCAGTCTCCCTTCTATGTGGAGGCTTCCTGCAGCTTCTCTGTAGCTTCCCATTaGGGAGTCAAAGAATGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: RQWFEYQSPFYVEASCSFSVASH*GVKEWS Trigger: GGACCATTCTTTGACTCCCAAATGGGAAGCTACAGA...GAAGCTGCAGGAAGCCTCCACATAGAAGGGAGACTGGTATTCAAACCATTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCTTAAGAGGTCATCCACTCTATAGAACTCATTCTGAGCTGGGAAGCAGCAGTATTCTTAGTGTGTTCTaGGTGGGGGTAGAGGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: ALRGHPLYRTHSELGSSSILSVF*VGVEVS Trigger: AGACACCTCTACCCCCACCAAGAACACACTAAGAAT...ACTGCTGCTTCCCAGCTCAGAATGAGTTCTATAGAGTGGATGACCTCTTAAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR TCA 72 bp | GTAGCCTTGGTCCCACACAGATCTCTTCAACTCATTTaGACTGTCTCACTGCCTCAGAGTTGTCTTAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VALVPHRSLQLI*TVSLPQSCLSF Trigger: GAAGCTAAGACAACTCTGAGGCAGTGAGACAGTTCAAATGAGTTGAAGAGATCTGTGTGGGACCAAGGCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR CCA 72 bp | GGCCTGAGTGACTGGTTTGTAGTCTCTGATCCTATCTaGACAACTGACAAAAATTACCTGAGCCATAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GLSDWFVVSDPI*TTDKNYLSHSL Trigger: CAGGCTATGGCTCAGGTAATTTTTGTCAGTTGTCCAGATAGGATCAGAGACTACAAACCAGTCACTCAGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR CCA 72 bp | CTGGCGTTGGAGGATGATGTCATTCCATTTGGTAGCTaGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LALEDDVIPFGS*LCLHETGYPKV Trigger: GACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGACATCATCCTCCAACGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR TCA 72 bp | ATCAGGGTATCAAACACAGCAAAAGGGACTGGGCTTTaGTATACAAACTGCTTACCATGGAGCAGAGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: IRVSNTAKGTGL*YTNCLPWSRGE Trigger: CTCTCCTCTGCTCCATGGTAAGCAGTTTGTATATCAAAGCCCAGTCCCTTTTGCTGTGTTTGATACCCTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR CCA 72 bp | GAAAACACTATCTTAGTTGTCTATCAAGTTGGGATGTaGAGGCAAGACACATGGCAATGCCCTCAGGTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: ENTILVVYQVGM*RQDTWQCPQVS Trigger: GCTAACCTGAGGGCATTGCCATGTGTCTTGCCTCCACATCCCAACTTGATAGACAACTAAGATAGTGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGTGTTTTCAGAAGTGATATGTCTTTCGACCTTGAAATCAGAGTCAGTCTATCCCAGCCAAGGCCTTaGTGTCTAGCCTGGTTAACT | + |
|
Preference number: 3 (lower is better) Translates to: LGVFRSDMSFDLEIRVSLSQPRP*CLAWLT Trigger: AGTTAACCAGGCTAGACACAAAGGCCTTGGCTGGGA...TAGACTGACTCTGATTTCAAGGTCGAAAGACATATCACTTCTGAAAACACCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCCCTCTGTTTTTATCAGCAGAGAAGAGCCACAGACTTAATTTCCTATACTCTTCTGTAGCTTCCCATTaGGGAGTCAAAGAATGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: APLFLSAEKSHRLNFLYSSVASH*GVKEWS Trigger: GGACCATTCTTTGACTCCCAAATGGGAAGCTACAGA...AGAGTATAGGAAATTAAGTCTGTGGCTCTTCTCTGCTGATAAAAACAGAGGGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR CCA 72 bp | GAGACAAATCAGGGTATCAAACACAGCAAAAGGGACTaGGCTTTGATATACAAACTGCTTACCATGGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ETNQGIKHSKRD*ALIYKLLTMEQ Trigger: CTGCTCCATGGTAAGCAGTTTGTATATCAAAGCCCAGTCCCTTTTGCTGTGTTTGATACCCTGATTTGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR CCA 72 bp | GTTGTCTATCAAGTTGGGATGTGGAGGCAAGACACATaGCAATGCCCTCAGGTTAGCAAAACTCCATTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: VVYQVGMWRQDT*QCPQVSKTPLK Trigger: TTTTAATGGAGTTTTGCTAACCTGAGGGCATTGCCATGTGTCTTGCCTCCACATCCCAACTTGATAGACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR CCA 72 bp | AGAAGAGCCACAGACTTAATTTCCTATACTCTTCAGTaGACCACCACAGGGGTCTGTTTCCTTTTAACTCTC | + |
|
Preference number: 3 (lower is better) Translates to: RRATDLISYTLQ*TTTGVCFLLTL Trigger: GAGAGTTAAAAGGAAACAGACCCCTGTGGTGGTCCACTGAAGAGTATAGGAAATTAAGTCTGTGGCTCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGACATCTACTTCACAAAGGTAGCCAAAGAGGATCCCTTTGAGTTGAAACAATCTGTAGCTTCCCATTaGGGAGTCAAAGAATGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: NDIYFTKVAKEDPFELKQSVASH*GVKEWS Trigger: GGACCATTCTTTGACTCCCAAATGGGAAGCTACAGA...TTGTTTCAACTCAAAGGGATCCTCTTTGGCTACCTTTGTGAAGTAGATGTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGACATCTACTTCACAAAGGTAGCCAAAGAGGATCCCTTTGAGTTGAAACAAATTCTTAGTGTGTTCTaGGTGGGGGTAGAGGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: NDIYFTKVAKEDPFELKQILSVF*VGVEVS Trigger: AGACACCTCTACCCCCACCAAGAACACACTAAGAAT...TTGTTTCAACTCAAAGGGATCCTCTTTGGCTACCTTTGTGAAGTAGATGTCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGACATCTACTTCACAAAGGTAGCCAAAGAGGATCCCTTTGAGTTGAAACAACTGTTTCTGATGCCTTaGGAAGGTGAGCTGAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: NDIYFTKVAKEDPFELKQLFLMP*EGELKA Trigger: AGCTTTCAGCTCACCTTCCAAAGGCATCAGAAACAG...TTGTTTCAACTCAAAGGGATCCTCTTTGGCTACCTTTGTGAAGTAGATGTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR TCA 72 bp | CAGGAAAGTGGGTCTTTTAGTGGGGAATATTTGGCTTaGTTAGACAATGGTTTGAATACCAGTCTCCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: QESGSFSGEYLA*LDNGLNTSLPS Trigger: AGAAGGGAGACTGGTATTCAAACCATTGTCTAATCAAGCCAAATATTCCCCACTAAAAGACCCACTTTCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR TCA 72 bp | CATCTACTTCACAAAGGTAGCCAAAGAGGATCCCTTTaGGTTGAAACAATGCTTCAGAAGATTCAGCAACAA | + |
|
Preference number: 3 (lower is better) Translates to: HLLHKGSQRGSL*VETMLQKIQQQ Trigger: TTGTTGCTGAATCTTCTGAAGCATTGTTTCAACTCAAAGGGATCCTCTTTGGCTACCTTTGTGAAGTAGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCTGTGCCCTGCTTTCCAGAGGCAGGTTCTGGCCTCTCTGGTCCCGTGCTTGCGGTGAGGCTACTTTaGGTCCTCCTCGGGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VAVPCFPEAGSGLSGPVLAVRLL*VLLGES Trigger: GCTCTCCCCGAGGAGGACCCAAAGTAGCCTCACCGC...AAGCACGGGACCAGAGAGGCCAGAACCTGCCTCTGGAAAGCAGGGCACAGCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | AGCTGGGAAGCAGCAGTGGCAGAACACCTGCCTTGCACACCAGGTCCTATGCTCGCGGTGAGGCTACTTTaGGTCCTCCTCGGGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SWEAAVAEHLPCTPGPMLAVRLL*VLLGES Trigger: GCTCTCCCCGAGGAGGACCCAAAGTAGCCTCACCGC...GAGCATAGGACCTGGTGTGCAAGGCAGGTGTTCTGCCACTGCTGCTTCCCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCTGTGCCCTGCTTTCCAGAGGCAGGTTCTGGCCTCTCTGGTCCCGTGCTTGTCCAGGTCATCATCTaGGTCTGGCTTCTCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VAVPCFPEAGSGLSGPVLVQVII*VWLLSA Trigger: GGCAGAGAGAAGCCAGACTCAGATGATGACCTGGAC...AAGCACGGGACCAGAGAGGCCAGAACCTGCCTCTGGAAAGCAGGGCACAGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCTGTGCCCTGCTTTCCAGAGGCAGGTTCTGGCCTCTCTGGTCCCGTGCTTTCGGCTGGGGGCACATaGCTATTCTTCTCCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VAVPCFPEAGSGLSGPVLSAGGT*LFFSTD Trigger: GTCTGTGGAGAAGAATAGTCATGTGCCCCCAGCCGA...AAGCACGGGACCAGAGAGGCCAGAACCTGCCTCTGGAAAGCAGGGCACAGCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCTGTGCCCTGCTTTCCAGAGGCAGGTTCTGGCCTCTCTGGTCCCGTGCTTGGCTCTGGCAGTCCCTaGTTTCCAGGCAGTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VAVPCFPEAGSGLSGPVLGSGSP*FPGSSE Trigger: TTCTGAACTGCCTGGAAAGCAGGGACTGCCAGAGCC...AAGCACGGGACCAGAGAGGCCAGAACCTGCCTCTGGAAAGCAGGGCACAGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGAGAGTGGCAGGGGGCACTGCAAGTGAGAGGTTGCAGCCTTGAATTAAGGTGTATGCCTCTCCCTTaGGGCCTCGCTCGGGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: TGEWQGALQVRGCSLELRCMPLP*GLARDG Trigger: GCCGTCCCGAGCGAGGCCCCAAGGGAGAGGCATACA...CCTTAATTCAAGGCTGCAACCTCTCACTTGCAGTGCCCCCTGCCACTCTCCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCTGTGCCCTGCTTTCCAGAGGCAGGTTCTGGCCTCTCTGGTCCCGTGCTTAGGCATTCCGCACTGTaGTGTGTCTGCTGTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VAVPCFPEAGSGLSGPVLRHSAL*CVCCLK Trigger: CTTCAGACAGCAGACACATCACAGTGCGGAATGCCT...AAGCACGGGACCAGAGAGGCCAGAACCTGCCTCTGGAAAGCAGGGCACAGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGAGAGTGGCAGGGGGCACTGCAAGTGAGAGGTTGCAGCCTTGAATTAAGGTGCAGGAGGCAGCAGTaGTGGCACCTCCCATCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: TGEWQGALQVRGCSLELRCRRQQ*WHLPSG Trigger: ACCGGATGGGAGGTGCCATCACTGCTGCCTCCTGCA...CCTTAATTCAAGGCTGCAACCTCTCACTTGCAGTGCCCCCTGCCACTCTCCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCTGTGCCCTGCTTTCCAGAGGCAGGTTCTGGCCTCTCTGGTCCCGTGCTTCTTTCCCGCTTATGCTaGGGAGACAGTTCCCGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VAVPCFPEAGSGLSGPVLLSRLC*GDSSRD Trigger: ATCACGGGAACTGTCTCCCCAGCATAAGCGGGAAAG...AAGCACGGGACCAGAGAGGCCAGAACCTGCCTCTGGAAAGCAGGGCACAGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | CCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTTGCAGGAGGCAGCAGTaGTGGCACCTCCCATCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: PFAGHFLKDRLCRVCLLSCRRQQ*WHLPSG Trigger: ACCGGATGGGAGGTGCCATCACTGCTGCCTCCTGCA...ACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | AGCTGGGAAGCAGCAGTGGCAGAACACCTGCCTTGCACACCAGGTCCTATGCTCGGCTCTGGCAGTCCCTaGTTTCCAGGCAGTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SWEAAVAEHLPCTPGPMLGSGSP*FPGSSE Trigger: TTCTGAACTGCCTGGAAAGCAGGGACTGCCAGAGCC...GAGCATAGGACCTGGTGTGCAAGGCAGGTGTTCTGCCACTGCTGCTTCCCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | AGCTGGGAAGCAGCAGTGGCAGAACACCTGCCTTGCACACCAGGTCCTATGCTCTCCACTCTCAGTGCCTaGCTTGGGAGCTCCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SWEAAVAEHLPCTPGPMLSTLSA*LGSSFP Trigger: TGGAAAGGAGCTCCCAAGCCAGGCACTGAGAGTGGA...GAGCATAGGACCTGGTGTGCAAGGCAGGTGTTCTGCCACTGCTGCTTCCCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCTGTGCCCTGCTTTCCAGAGGCAGGTTCTGGCCTCTCTGGTCCCGTGCTTCTGTGGTTTGGGCTCTaGCTCTGGAGTGATAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VAVPCFPEAGSGLSGPVLLWFGL*LWSDSC Trigger: ACAACTATCACTCCAGAGCCAGAGCCCAAACCACAG...AAGCACGGGACCAGAGAGGCCAGAACCTGCCTCTGGAAAGCAGGGCACAGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | AGCTGGGAAGCAGCAGTGGCAGAACACCTGCCTTGCACACCAGGTCCTATGCTCAATTGCTGTGAGCTCTaGGGGCCCCACCTGGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: SWEAAVAEHLPCTPGPMLNCCEL*GPHLDV Trigger: AACATCCAGGTGGGGCCCCCAGAGCTCACAGCAATT...GAGCATAGGACCTGGTGTGCAAGGCAGGTGTTCTGCCACTGCTGCTTCCCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | CCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTGCACCTCTGATGCGGTaGGGCTACTTTGGGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PFAGHFLKDRLCRVCLLSAPLMR*GYFGSS Trigger: GGAGGACCCAAAGTAGCCTCACCGCATCAGAGGTGC...ACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCCAGTGTATGCCTCTCCCTTaGGGCCTCGCTCGGGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: WGFPKRRMMKSAEVSSPQCMPLP*GLARDG Trigger: GCCGTCCCGAGCGAGGCCCCAAGGGAGAGGCATACA...CTGGGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | AGCTGGGAAGCAGCAGTGGCAGAACACCTGCCTTGCACACCAGGTCCTATGCTCCCTGGATGTTGCTGGTaGATGTATGCCTCTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SWEAAVAEHLPCTPGPMLPGCCW*MYASPL Trigger: CAAGGGAGAGGCATACATCCACCAGCAACATCCAGG...GAGCATAGGACCTGGTGTGCAAGGCAGGTGTTCTGCCACTGCTGCTTCCCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGAGAGTGGCAGGGGGCACTGCAAGTGAGAGGTTGCAGCCTTGAATTAAGGAACTGGCTCAGGCTCTaGCAGTCCCTGCTTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TGEWQGALQVRGCSLELRNWLRL*QSLLSR Trigger: CCTGGAAAGCAGGGACTGCCAGAGCCTGAGCCAGTT...CCTTAATTCAAGGCTGCAACCTCTCACTTGCAGTGCCCCCTGCCACTCTCCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR CAA 72 bp | CCCCTGCCACTTGAGAGGGATGGCTGGTGTGCAAGCTaGCCTGTAGCCTTGGTCCCACACAGATCTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PLPLERDGWCAS*PVALVPHRSLQ Trigger: TTGAAGAGATCTGTGTGGGACCAAGGCTACAGGCAAGCTTGCACACCAGCCATCCCTCTCAAGTGGCAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | ATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTGTGCGGGTGAGCACCTCTaGTGCGGTGAGGCTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ICWALPKRQAVPGLSTQCAGEHL*CGEATL Trigger: CAAAGTAGCCTCACCGCATCAGAGGTGCTCACCCGC...ACACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCTGCAGGAGGCAGCAGTaGTGGCACCTCCCATCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: VWGFPKRRMMKSAEVSSPCRRQQ*WHLPSG Trigger: ACCGGATGGGAGGTGCCATCACTGCTGCCTCCTGCA...GGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGAAAGGTGATGCCAGCAGCAGTGTTGGTGCCCAGGAAAAGAGATGTACCAGGAGTCGCTGCCCTCTaGCTGGATCACCTTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGKVMPAAVLVPRKRDVPGVAAL*LDHLVL Trigger: CAGGACAAGGTGATCCAGGCAGAGGGCAGCGACTCC...TGGTACATCTCTTTTCCTGGGCACCAACACTGCTGCTGGCATCACCTTTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | ATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTGTGGAGTCGCTGCCCTCTaGCTGGATCACCTTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ICWALPKRQAVPGLSTQCGVAAL*LDHLVL Trigger: CAGGACAAGGTGATCCAGGCAGAGGGCAGCGACTCC...ACACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGAGAGTGGCAGGGGGCACTGCAAGTGAGAGGTTGCAGCCTTGAATTAAGGAGCCTTTCCCGCTTATaGTGGGGAGACAGTTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: TGEWQGALQVRGCSLELRSLSRL*WGDSSR Trigger: ACGGGAACTGTCTCCCCAGCATAAGCGGGAAAGGCT...CCTTAATTCAAGGCTGCAACCTCTCACTTGCAGTGCCCCCTGCCACTCTCCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCGCGGTGAGGCTACTTTaGGTCCTCCTCGGGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VWGFPKRRMMKSAEVSSPAVRLL*VLLGES Trigger: GCTCTCCCCGAGGAGGACCCAAAGTAGCCTCACCGC...GGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | CCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTCTCCTCAGTCCAAACTaGCTCAGGCTCTGGCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PFAGHFLKDRLCRVCLLSLLSPN*LRLWQS Trigger: GGACTGCCAGAGCCTGAGCCAGTTTGGACTGAGGAG...ACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR CAA 72 bp | ATAGCCTGGCTCTCTACAGTCTCCCAGCCAAGGCCTTaGTGTCTAGCCTGGTTAACTGGCCTTGGGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IAWLSTVSQPRP*CLAWLTGLGSF Trigger: GAAGGACCCAAGGCCAGTTAACCAGGCTAGACACAAAGGCCTTGGCTGGGAGACTGTAGAGAGCCAGGCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | TTTGCTTTCCCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTGTAACGGCTAAGCACTaGTGGCTGCTCCCTACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FAFPFAGHFLKDRLCRVCVTAKH*WLLPTP Trigger: AGGGGTAGGGAGCAGCCATCAGTGCTTAGCCGTTAC...ACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGGGAAAGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGAGAGTGGCAGGGGGCACTGCAAGTGAGAGGTTGCAGCCTTGAATTAAGGTCTGAGGAGGCTTTTTaGGATGAGGAGAGAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TGEWQGALQVRGCSLELRSEEAF*DEERAP Trigger: CGGAGCTCTCTCCTCATCTCAAAAAGCCTCCTCAGA...CCTTAATTCAAGGCTGCAACCTCTCACTTGCAGTGCCCCCTGCCACTCTCCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCTGTGCCCTGCTTTCCAGAGGCAGGTTCTGGCCTCTCTGGTCCCGTGCTTGTGATGTCATGTTTATaGATAGAGAGCTCAAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VAVPCFPEAGSGLSGPVLVMSCL*IESSRG Trigger: CCCTCTTGAGCTCTCTATTCATAAACATGACATCAC...AAGCACGGGACCAGAGAGGCCAGAACCTGCCTCTGGAAAGCAGGGCACAGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCGCACCTCTGATGCGGTaGGGCTACTTTGGGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VWGFPKRRMMKSAEVSSPAPLMR*GYFGSS Trigger: GGAGGACCCAAAGTAGCCTCACCGCATCAGAGGTGC...GGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | TGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCCAGGCACCTCTGATGCGGTaGGGCTACTTTGGGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WGFPKRRMMKSAEVSSPQAPLMR*GYFGSS Trigger: GGAGGACCCAAAGTAGCCTCACCGCATCAGAGGTGC...CTGGGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | TGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCCAGGCGGGTGAGCACCTCTaGTGCGGTGAGGCTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: WGFPKRRMMKSAEVSSPQAGEHL*CGEATL Trigger: CAAAGTAGCCTCACCGCATCAGAGGTGCTCACCCGC...CTGGGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCGGAGTCGCTGCCCTCTaGCTGGATCACCTTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VWGFPKRRMMKSAEVSSPGVAAL*LDHLVL Trigger: CAGGACAAGGTGATCCAGGCAGAGGGCAGCGACTCC...GGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGAGAGTGGCAGGGGGCACTGCAAGTGAGAGGTTGCAGCCTTGAATTAAGGTCTCTTCCCACAGTGTaGCTCAGAGGAGAGGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TGEWQGALQVRGCSLELRSLPTV*LRGEVR Trigger: TCTGACCTCTCCTCTGAGGCACACTGTGGGAAGAGA...CCTTAATTCAAGGCTGCAACCTCTCACTTGCAGTGCCCCCTGCCACTCTCCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | TTTGCTTTCCCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTCAGCATAAGGCTTTaGTGGGTGCAGCCGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FAFPFAGHFLKDRLCRVCLSIRL*WVQPLL Trigger: GAGGAGCGGCTGCACCCAGCAAAGCCTTATGCTGAG...ACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGGGAAAGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTCAGAAGATTCAGCAACAAGCAAACAGTTCTTAACTCCCCGTGTGGTCAGTGTATGCCTCTCCCTTaGGGCCTCGCTCGGGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: CFRRFSNKQTVLNSPCGQCMPLP*GLARDG Trigger: GCCGTCCCGAGCGAGGCCCCAAGGGAGAGGCATACA...CTGACCACACGGGGAGTTAAGAACTGTTTGCTTGTTGCTGAATCTTCTGAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR CCA 90 bp | AGCAAAAGGGACTGGGCTTTGATATACAAACTGCTTACCATGGAGCAGAGGAGATGTATGCCTCTCCCTTaGGGCCTCGCTCGGGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: SKRDWALIYKLLTMEQRRCMPLP*GLARDG Trigger: GCCGTCCCGAGCGAGGCCCCAAGGGAGAGGCATACA...TCTCCTCTGCTCCATGGTAAGCAGTTTGTATATCAAAGCCCAGTCCCTTTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR CCA 90 bp | CCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTCCACCTGGATGTTGCTaGTGGATGTATGCCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PFAGHFLKDRLCRVCLLSPPGCC*WMYASP Trigger: GGGAGAGGCATACATCCACCAGCAACATCCAGGTGG...ACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | CCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTAATTGCTGTGAGCTCTaGGGGCCCCACCTGGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: PFAGHFLKDRLCRVCLLSNCCEL*GPHLDV Trigger: AACATCCAGGTGGGGCCCCCAGAGCTCACAGCAATT...ACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR CCA 90 bp | ATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTGTCTCCTCAGTCCAAACTaGCTCAGGCTCTGGCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ICWALPKRQAVPGLSTQCLLSPN*LRLWQS Trigger: GGACTGCCAGAGCCTGAGCCAGTTTGGACTGAGGAG...ACACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | TGCCAGCAGCAGTGTTGGTGCCCAGGAAAAGAGATGTACCAGATCTGTCTGTTTGTAACGGCTAAGCACTaGTGGCTGCTCCCTACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CQQQCWCPGKEMYQICLFVTAKH*WLLPTP Trigger: AGGGGTAGGGAGCAGCCATCAGTGCTTAGCCGTTAC...AAACAGACAGATCTGGTACATCTCTTTTCCTGGGCACCAACACTGCTGCTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCTGTGCCCTGCTTTCCAGAGGCAGGTTCTGGCCTCTCTGGTCCCGTGCTTTTGGGCACAGATACATaGGTGGAATCACTAAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: VAVPCFPEAGSGLSGPVLLGTDT*VESLNV Trigger: AACATTTAGTGATTCCACTCATGTATCTGTGCCCAA...AAGCACGGGACCAGAGAGGCCAGAACCTGCCTCTGGAAAGCAGGGCACAGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGGAAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTGGAGGCTTTTTGAGATaGGGAGAGAGCTCCGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGKQSVHAFHGAIACGVTGGFLR*GESSDG Trigger: GCCATCGGAGCTCTCTCCTCATCTCAAAAAGCCTCC...AGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTTCCCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | ATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTGTGGAGGCTTTTTGAGATaGGGAGAGAGCTCCGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: ICWALPKRQAVPGLSTQCGGFLR*GESSDG Trigger: GCCATCGGAGCTCTCTCCTCATCTCAAAAAGCCTCC...ACACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | TTTGCTTTCCCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTGGGCTGAAGGGCCTTTaGTTTTTCACCCCAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FAFPFAGHFLKDRLCRVCGLKGL*FFTPAQ Trigger: CTGTGCTGGGGTGAAAAATCAAAGGCCCTTCAGCCC...ACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGGGAAAGCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | ATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTGTTCGGCTGGGGGCACATaGCTATTCTTCTCCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ICWALPKRQAVPGLSTQCSAGGT*LFFSTD Trigger: GTCTGTGGAGAAGAATAGTCATGTGCCCCCAGCCGA...ACACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | TTTGCTTTCCCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTTCGGCTGGGGGCACATaGCTATTCTTCTCCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FAFPFAGHFLKDRLCRVCSAGGT*LFFSTD Trigger: GTCTGTGGAGAAGAATAGTCATGTGCCCCCAGCCGA...ACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGGGAAAGCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | TTTGCTTTCCCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTTATGGCTTTTCCACCTaGTTGTCTCGGCTGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FAFPFAGHFLKDRLCRVCYGFST*LSRLGA Trigger: TGCCCCCAGCCGAGACAATCAGGTGGAAAAGCCATA...ACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGGGAAAGCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGGAAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTCTGTTCAGATGGCTGTaGCCTGGGCTGCTCAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GGKQSVHAFHGAIACGVTLFRWL*PGLLKF Trigger: GAACTTGAGCAGCCCAGGTCACAGCCATCTGAACAG...AGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTTCCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGAAAGGTGATGCCAGCAGCAGTGTTGGTGCCCAGGAAAAGAGATGTACCACTGTTCAGATGGCTGTaGCCTGGGCTGCTCAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RGKVMPAAVLVPRKRDVPLFRWL*PGLLKF Trigger: GAACTTGAGCAGCCCAGGTCACAGCCATCTGAACAG...TGGTACATCTCTTTTCCTGGGCACCAACACTGCTGCTGGCATCACCTTTCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | ATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTGTCTGTTCAGATGGCTGTaGCCTGGGCTGCTCAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ICWALPKRQAVPGLSTQCLFRWL*PGLLKF Trigger: GAACTTGAGCAGCCCAGGTCACAGCCATCTGAACAG...ACACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GCCTTAAGAGGTCATCCACTCTATAGAACTCATTCTGAGCTGGGAAGCAGCAGTGCACCTCTGATGCGGTaGGGCTACTTTGGGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALRGHPLYRTHSELGSSSAPLMR*GYFGSS Trigger: GGAGGACCCAAAGTAGCCTCACCGCATCAGAGGTGC...ACTGCTGCTTCCCAGCTCAGAATGAGTTCTATAGAGTGGATGACCTCTTAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCTGTGCCCTGCTTTCCAGAGGCAGGTTCTGGCCTCTCTGGTCCCGTGCTTTTAGGTAGTCTAGACTaGCCTTCCTTTTTGACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VAVPCFPEAGSGLSGPVLLGSLD*PSFLTL Trigger: AAGAGTCAAAAAGGAAGGGCAGTCTAGACTACCTAA...AAGCACGGGACCAGAGAGGCCAGAACCTGCCTCTGGAAAGCAGGGCACAGCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | ATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTGTAGCCTTTCCCGCTTATaGTGGGGAGACAGTTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: ICWALPKRQAVPGLSTQCSLSRL*WGDSSR Trigger: ACGGGAACTGTCTCCCCAGCATAAGCGGGAAAGGCT...ACACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGGAAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTTCCACTCTCAGTGCCTaGCTTGGGAGCTCCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGKQSVHAFHGAIACGVTSTLSA*LGSSFP Trigger: TGGAAAGGAGCTCCCAAGCCAGGCACTGAGAGTGGA...AGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTTCCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | ATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTGTCCACCTGGATGTTGCTaGTGGATGTATGCCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ICWALPKRQAVPGLSTQCPPGCC*WMYASP Trigger: GGGAGAGGCATACATCCACCAGCAACATCCAGGTGG...ACACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | CCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTTCCATGCTTGATGAGTaGTTGCAGGAGGCAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PFAGHFLKDRLCRVCLLSSMLDE*LQEAAV Trigger: CACTGCTGCCTCCTGCAACCACTCATCAAGCATGGA...ACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCAACTGGCTCAGGCTCTaGCAGTCCCTGCTTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VWGFPKRRMMKSAEVSSPNWLRL*QSLLSR Trigger: CCTGGAAAGCAGGGACTGCCAGAGCCTGAGCCAGTT...GGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | GTAGCTTCCCATTTGGGAGTCAAAGAATGGTCCATGCTACCTTGGGGACAGAGACTCCTCAGTCCAAACTaGCTCAGGCTCTGGCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VASHLGVKEWSMLPWGQRLLSPN*LRLWQS Trigger: GGACTGCCAGAGCCTGAGCCAGTTTGGACTGAGGAG...TCTCTGTCCCCAAGGTAGCATGGACCATTCTTTGACTCCCAAATGGGAAGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | TGCCAGCAGCAGTGTTGGTGCCCAGGAAAAGAGATGTACCAGATCTGTCTGTTTCTCCTCAGTCCAAACTaGCTCAGGCTCTGGCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CQQQCWCPGKEMYQICLFLLSPN*LRLWQS Trigger: GGACTGCCAGAGCCTGAGCCAGTTTGGACTGAGGAG...AAACAGACAGATCTGGTACATCTCTTTTCCTGGGCACCAACACTGCTGCTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGGAAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTGGGAGACAGTTCCCGTaGTGTATGCTTGGACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: GGKQSVHAFHGAIACGVTGRQFP*CMLGHR Trigger: TCTGTGTCCAAGCATACATCACGGGAACTGTCTCCC...AGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTTCCCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | AGACAATGGTTTGAATACCAGTCTCCCTTCTATGTGGAGGCTTCCTGCAGCTTCGTAACGGCTAAGCACTaGTGGCTGCTCCCTACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RQWFEYQSPFYVEASCSFVTAKH*WLLPTP Trigger: AGGGGTAGGGAGCAGCCATCAGTGCTTAGCCGTTAC...GAAGCTGCAGGAAGCCTCCACATAGAAGGGAGACTGGTATTCAAACCATTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCCGGGTCTGTCTACTCAGTGTGGGGATTTCCTAAGAGGAGAATGATGAAGTATGGCTTTTCCACCTaGTTGTCTCGGCTGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CAGSVYSVWGFPKRRMMKYGFST*LSRLGA Trigger: TGCCCCCAGCCGAGACAATCAGGTGGAAAAGCCATA...CTTCATCATTCTCCTCTTAGGAAATCCCCACACTGAGTAGACAGACCCGGCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCCTGTTCAGATGGCTGTaGCCTGGGCTGCTCAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VWGFPKRRMMKSAEVSSPLFRWL*PGLLKF Trigger: GAACTTGAGCAGCCCAGGTCACAGCCATCTGAACAG...GGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | GTAGCTTCCCATTTGGGAGTCAAAGAATGGTCCATGCTACCTTGGGGACAGAGAAGCCTTTCCCGCTTATaGTGGGGAGACAGTTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: VASHLGVKEWSMLPWGQRSLSRL*WGDSSR Trigger: ACGGGAACTGTCTCCCCAGCATAAGCGGGAAAGGCT...TCTCTGTCCCCAAGGTAGCATGGACCATTCTTTGACTCCCAAATGGGAAGCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCGACATGGTTGCTAATTaGTGTGAGCTCTGGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VWGFPKRRMMKSAEVSSPDMVAN*CELWGP Trigger: GGGCCCCCAGAGCTCACAGCAATTAGCAACCATGTC...GGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | TGTGCCGGGTCTGTCTACTCAGTGTGGGGATTTCCTAAGAGGAGAATGATGAAGGACATGGTTGCTAATTaGTGTGAGCTCTGGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CAGSVYSVWGFPKRRMMKDMVAN*CELWGP Trigger: GGGCCCCCAGAGCTCACAGCAATTAGCAACCATGTC...CTTCATCATTCTCCTCTTAGGAAATCCCCACACTGAGTAGACAGACCCGGCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | TGTGCCGGGTCTGTCTACTCAGTGTGGGGATTTCCTAAGAGGAGAATGATGAAGGGCTCTGGCAGTCCCTaGTTTCCAGGCAGTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CAGSVYSVWGFPKRRMMKGSGSP*FPGSSE Trigger: TTCTGAACTGCCTGGAAAGCAGGGACTGCCAGAGCC...CTTCATCATTCTCCTCTTAGGAAATCCCCACACTGAGTAGACAGACCCGGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | AGACAATGGTTTGAATACCAGTCTCCCTTCTATGTGGAGGCTTCCTGCAGCTTCCTCAGCATAAGGCTTTaGTGGGTGCAGCCGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RQWFEYQSPFYVEASCSFLSIRL*WVQPLL Trigger: GAGGAGCGGCTGCACCCAGCAAAGCCTTATGCTGAG...GAAGCTGCAGGAAGCCTCCACATAGAAGGGAGACTGGTATTCAAACCATTGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | AGCTGGGAAGCAGCAGTGGCAGAACACCTGCCTTGCACACCAGGTCCTATGCTCTTTATCTCCTCTAGCTaGCTGGCTAAGCTTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SWEAAVAEHLPCTPGPMLFISSS*LAKLLF Trigger: AAACAGAAGCTTAGCCAGCCAGCTAGAGGAGATAAA...GAGCATAGGACCTGGTGTGCAAGGCAGGTGTTCTGCCACTGCTGCTTCCCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | CCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTCTGTGGTTTGGGCTCTaGCTCTGGAGTGATAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PFAGHFLKDRLCRVCLLSLWFGL*LWSDSC Trigger: ACAACTATCACTCCAGAGCCAGAGCCCAAACCACAG...ACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | ATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTGTCCTGGATGTTGCTGGTaGATGTATGCCTCTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ICWALPKRQAVPGLSTQCPGCCW*MYASPL Trigger: CAAGGGAGAGGCATACATCCACCAGCAACATCCAGG...ACACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGGAAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTCCTGGATGTTGCTGGTaGATGTATGCCTCTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GGKQSVHAFHGAIACGVTPGCCW*MYASPL Trigger: CAAGGGAGAGGCATACATCCACCAGCAACATCCAGG...AGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTTCCCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCCAGCCACCTGGATGTTGCTaGTGGATGTATGCCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: WGFPKRRMMKSAEVSSPQPPGCC*WMYASP Trigger: GGGAGAGGCATACATCCACCAGCAACATCCAGGTGG...CTGGGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | TGCCAGCAGCAGTGTTGGTGCCCAGGAAAAGAGATGTACCAGATCTGTCTGTTTCCACCTGGATGTTGCTaGTGGATGTATGCCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CQQQCWCPGKEMYQICLFPPGCC*WMYASP Trigger: GGGAGAGGCATACATCCACCAGCAACATCCAGGTGG...AAACAGACAGATCTGGTACATCTCTTTTCCTGGGCACCAACACTGCTGCTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | TGTGCCGGGTCTGTCTACTCAGTGTGGGGATTTCCTAAGAGGAGAATGATGAAGAATTGCTGTGAGCTCTaGGGGCCCCACCTGGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: CAGSVYSVWGFPKRRMMKNCCEL*GPHLDV Trigger: AACATCCAGGTGGGGCCCCCAGAGCTCACAGCAATT...CTTCATCATTCTCCTCTTAGGAAATCCCCACACTGAGTAGACAGACCCGGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTAAGAGGTCATCCACTCTATAGAACTCATTCTGAGCTGGGAAGCAGCAGTAACTGGCTCAGGCTCTaGCAGTCCCTGCTTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALRGHPLYRTHSELGSSSNWLRL*QSLLSR Trigger: CCTGGAAAGCAGGGACTGCCAGAGCCTGAGCCAGTT...ACTGCTGCTTCCCAGCTCAGAATGAGTTCTATAGAGTGGATGACCTCTTAAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GCCTTAAGAGGTCATCCACTCTATAGAACTCATTCTGAGCTGGGAAGCAGCAGTGGAGGCTTTTTGAGATaGGGAGAGAGCTCCGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALRGHPLYRTHSELGSSSGGFLR*GESSDG Trigger: GCCATCGGAGCTCTCTCCTCATCTCAAAAAGCCTCC...ACTGCTGCTTCCCAGCTCAGAATGAGTTCTATAGAGTGGATGACCTCTTAAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GTAGCTTCCCATTTGGGAGTCAAAGAATGGTCCATGCTACCTTGGGGACAGAGATCTGAGGAGGCTTTTTaGGATGAGGAGAGAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VASHLGVKEWSMLPWGQRSEEAF*DEERAP Trigger: CGGAGCTCTCTCCTCATCTCAAAAAGCCTCCTCAGA...TCTCTGTCCCCAAGGTAGCATGGACCATTCTTTGACTCCCAAATGGGAAGCTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTAGAGGAGTCCAGGTCATCATCTaGGTCTGGCTTCTCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KQSVHAFHGAIACGVTRGVQVII*VWLLSA Trigger: GGCAGAGAGAAGCCAGACTCAGATGATGACCTGGAC...TCCTCTAGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGCCACAGACTTAATTTCCTATACTCTTCAGTGGACCACCACAGGGGTCTGGTCCAGGTCATCATCTaGGTCTGGCTTCTCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KSHRLNFLYSSVDHHRGLVQVII*VWLLSA Trigger: GGCAGAGAGAAGCCAGACTCAGATGATGACCTGGAC...CAGACCCCTGTGGTGGTCCACTGAAGAGTATAGGAAATTAAGTCTGTGGCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GCCTTAAGAGGTCATCCACTCTATAGAACTCATTCTGAGCTGGGAAGCAGCAGTTATGGCTTTTCCACCTaGTTGTCTCGGCTGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALRGHPLYRTHSELGSSSYGFST*LSRLGA Trigger: TGCCCCCAGCCGAGACAATCAGGTGGAAAAGCCATA...ACTGCTGCTTCCCAGCTCAGAATGAGTTCTATAGAGTGGATGACCTCTTAAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | CCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTGATGTGTCTGCTGTCTaGAGAGGCACTATGGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PFAGHFLKDRLCRVCLLSDVSAV*RGTMAF Trigger: AAAAGCCATAGTGCCTCTTCAGACAGCAGACACATC...ACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | TGCCAGCAGCAGTGTTGGTGCCCAGGAAAAGAGATGTACCAGATCTGTCTGTTTAGGCATTCCGCACTGTaGTGTGTCTGCTGTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CQQQCWCPGKEMYQICLFRHSAL*CVCCLK Trigger: CTTCAGACAGCAGACACATCACAGTGCGGAATGCCT...AAACAGACAGATCTGGTACATCTCTTTTCCTGGGCACCAACACTGCTGCTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | AGCTGGGAAGCAGCAGTGGCAGAACACCTGCCTTGCACACCAGGTCCTATGCTCTTAGGTAGTCTAGACTaGCCTTCCTTTTTGACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SWEAAVAEHLPCTPGPMLLGSLD*PSFLTL Trigger: AAGAGTCAAAAAGGAAGGGCAGTCTAGACTACCTAA...GAGCATAGGACCTGGTGTGCAAGGCAGGTGTTCTGCCACTGCTGCTTCCCAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCAAAGGGAGGGAAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTTCTCGTGCCTGCCTCTaGCCAAAAGGAAAGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GAKGGKQSVHAFHGAIACSRACL*PKGKHL Trigger: AAGATGCTTTCCTTTTGGGCAGAGGCAGGCACGAGA...ACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTTCCCTCCCTTTGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGAAAGGTGATGCCAGCAGCAGTGTTGGTGCCCAGGAAAAGAGATGTACCATCTCGTGCCTGCCTCTaGCCAAAAGGAAAGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RGKVMPAAVLVPRKRDVPSRACL*PKGKHL Trigger: AAGATGCTTTCCTTTTGGGCAGAGGCAGGCACGAGA...TGGTACATCTCTTTTCCTGGGCACCAACACTGCTGCTGGCATCACCTTTCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGGAAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTGTGAGAGGACCCAGGTaGAAATCGGTCTTCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGKQSVHAFHGAIACGVTVRGPR*KSVFSS Trigger: AGAACTGAAGACCGATTTGCACCTGGGTCCTCTCAC...AGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTTCCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | GTAGCTTCCCATTTGGGAGTCAAAGAATGGTCCATGCTACCTTGGGGACAGAGACTAAGCACTGATGGCTaGTCCCTACCCCTTTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VASHLGVKEWSMLPWGQRLSTDG*SLPLFP Trigger: AGGGAAAAGGGGTAGGGAGCAGCCATCAGTGCTTAG...TCTCTGTCCCCAAGGTAGCATGGACCATTCTTTGACTCCCAAATGGGAAGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCTCTCTTCCCACAGTGTaGCTCAGAGGAGAGGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VWGFPKRRMMKSAEVSSPSLPTV*LRGEVR Trigger: TCTGACCTCTCCTCTGAGGCACACTGTGGGAAGAGA...GGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGCCACAGACTTAATTTCCTATACTCTTCAGTGGACCACCACAGGGGTCTGGACATGGTTGCTAATTaGTGTGAGCTCTGGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KSHRLNFLYSSVDHHRGLDMVAN*CELWGP Trigger: GGGCCCCCAGAGCTCACAGCAATTAGCAACCATGTC...CAGACCCCTGTGGTGGTCCACTGAAGAGTATAGGAAATTAAGTCTGTGGCTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | GCCTTAAGAGGTCATCCACTCTATAGAACTCATTCTGAGCTGGGAAGCAGCAGTGGCTCTGGCAGTCCCTaGTTTCCAGGCAGTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALRGHPLYRTHSELGSSSGSGSP*FPGSSE Trigger: TTCTGAACTGCCTGGAAAGCAGGGACTGCCAGAGCC...ACTGCTGCTTCCCAGCTCAGAATGAGTTCTATAGAGTGGATGACCTCTTAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | AGCAAAAGGGACTGGGCTTTGATATACAAACTGCTTACCATGGAGCAGAGGAGACTCAGCATAAGGCTTTaGTGGGTGCAGCCGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKRDWALIYKLLTMEQRRLSIRL*WVQPLL Trigger: GAGGAGCGGCTGCACCCAGCAAAGCCTTATGCTGAG...TCTCCTCTGCTCCATGGTAAGCAGTTTGTATATCAAAGCCCAGTCCCTTTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | GTAACCACTTCACTCCAGGATTTATCAAGTGTGAGTGAGGGTTTAAAGCCTGGCCTCAGCATAAGGCTTTaGTGGGTGCAGCCGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTTSLQDLSSVSEGLKPGLSIRL*WVQPLL Trigger: GAGGAGCGGCTGCACCCAGCAAAGCCTTATGCTGAG...GCCAGGCTTTAAACCCTCACTCACACTTGATAAATCCTGGAGTGAAGTGGTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168936.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGAGAGTGGCAGGGGGCACTGCAAGTGAGAGGTTGCAGCCTTGAATTAAGGTCTCCTCTAGCTGGCTaGCTAAGCTTCTGTTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: TGEWQGALQVRGCSLELRSPLAG*LSFCFY Trigger: ATAGAAACAGAAGCTTAGCCAGCCAGCTAGAGGAGA...CCTTAATTCAAGGCTGCAACCTCTCACTTGCAGTGCCCCCTGCCACTCTCCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCCAGCTTTCCCGCTTATGCTaGGGAGACAGTTCCCGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: WGFPKRRMMKSAEVSSPQLSRLC*GDSSRD Trigger: ATCACGGGAACTGTCTCCCCAGCATAAGCGGGAAAG...CTGGGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGGAAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTTCTCAGTGCCTGGCTTaGGAGCTCCTTTCCAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: GGKQSVHAFHGAIACGVTSQCLA*ELLSKL Trigger: AAGTTTGGAAAGGAGCTCCCAAGCCAGGCACTGAGA...AGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTTCCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGCCACAGACTTAATTTCCTATACTCTTCAGTGGACCACCACAGGGGTCTGTCCACTCTCAGTGCCTaGCTTGGGAGCTCCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KSHRLNFLYSSVDHHRGLSTLSA*LGSSFP Trigger: TGGAAAGGAGCTCCCAAGCCAGGCACTGAGAGTGGA...CAGACCCCTGTGGTGGTCCACTGAAGAGTATAGGAAATTAAGTCTGTGGCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | TTTGCTTTCCCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTGTGGTTTGGGCTCTaGCTCTGGAGTGATAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FAFPFAGHFLKDRLCRVCLWFGL*LWSDSC Trigger: ACAACTATCACTCCAGAGCCAGAGCCCAAACCACAG...ACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGGGAAAGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGGAAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTAGAGGGGAGCTGACATaGTTGCTAATTGCTGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGKQSVHAFHGAIACGVTRGELT*LLIAVS Trigger: GCTCACAGCAATTAGCAACCATGTCAGCTCCCCTCT...AGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTTCCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | TTTGCTTTCCCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTAGAGGGGAGCTGACATaGTTGCTAATTGCTGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FAFPFAGHFLKDRLCRVCRGELT*LLIAVS Trigger: GCTCACAGCAATTAGCAACCATGTCAGCTCCCCTCT...ACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGGGAAAGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | CCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTCTCTGCTCTATTCTTTaGAGACCCATCTCCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: PFAGHFLKDRLCRVCLLSLCSIL*RPISHS Trigger: AGAGTGGGAGATGGGTCTCCAAAGAATAGAGCAGAG...ACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGGAAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTCCTGATTGTCTCGGCTaGGGGCACATGACTATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GGKQSVHAFHGAIACGVTPDCLG*GHMTIL Trigger: AAGAATAGTCATGTGCCCCCAGCCGAGACAATCAGG...AGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTTCCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | ATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTGTCCTGATTGTCTCGGCTaGGGGCACATGACTATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ICWALPKRQAVPGLSTQCPDCLG*GHMTIL Trigger: AAGAATAGTCATGTGCCCCCAGCCGAGACAATCAGG...ACACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGAAAGGTGATGCCAGCAGCAGTGTTGGTGCCCAGGAAAAGAGATGTACCACAGATGGCTGTGACCTaGGCTGCTCAAGTTCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RGKVMPAAVLVPRKRDVPQMAVT*AAQVLR Trigger: TCTTAGAACTTGAGCAGCCCAGGTCACAGCCATCTG...TGGTACATCTCTTTTCCTGGGCACCAACACTGCTGCTGGCATCACCTTTCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | AGACAATGGTTTGAATACCAGTCTCCCTTCTATGTGGAGGCTTCCTGCAGCTTCGGGAGACAGTTCCCGTaGTGTATGCTTGGACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: RQWFEYQSPFYVEASCSFGRQFP*CMLGHR Trigger: TCTGTGTCCAAGCATACATCACGGGAACTGTCTCCC...GAAGCTGCAGGAAGCCTCCACATAGAAGGGAGACTGGTATTCAAACCATTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | TGCCAGCAGCAGTGTTGGTGCCCAGGAAAAGAGATGTACCAGATCTGTCTGTTTCTTTTCCCTTCACTGTaGGAGGACCCAGGTGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: CQQQCWCPGKEMYQICLFLFPSL*EDPGAN Trigger: ATTTGCACCTGGGTCCTCTCACAGTGAAGGGAAAAG...AAACAGACAGATCTGGTACATCTCTTTTCCTGGGCACCAACACTGCTGCTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | TGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCCAGCTTTTCCCTTCACTGTaGGAGGACCCAGGTGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: WGFPKRRMMKSAEVSSPQLFPSL*EDPGAN Trigger: ATTTGCACCTGGGTCCTCTCACAGTGAAGGGAAAAG...CTGGGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCCGGGTCTGTCTACTCAGTGTGGGGATTTCCTAAGAGGAGAATGATGAAGCTTTTCCCTTCACTGTaGGAGGACCCAGGTGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: CAGSVYSVWGFPKRRMMKLFPSL*EDPGAN Trigger: ATTTGCACCTGGGTCCTCTCACAGTGAAGGGAAAAG...CTTCATCATTCTCCTCTTAGGAAATCCCCACACTGAGTAGACAGACCCGGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GTAGCTTCCCATTTGGGAGTCAAAGAATGGTCCATGCTACCTTGGGGACAGAGACTTTTCCCTTCACTGTaGGAGGACCCAGGTGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VASHLGVKEWSMLPWGQRLFPSL*EDPGAN Trigger: ATTTGCACCTGGGTCCTCTCACAGTGAAGGGAAAAG...TCTCTGTCCCCAAGGTAGCATGGACCATTCTTTGACTCCCAAATGGGAAGCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTAGAGGATCTGAGGAGGCTTTTTaGGATGAGGAGAGAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KQSVHAFHGAIACGVTRGSEEAF*DEERAP Trigger: CGGAGCTCTCTCCTCATCTCAAAAAGCCTCCTCAGA...TCCTCTAGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | ATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTGTGATGTGTCTGCTGTCTaGAGAGGCACTATGGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ICWALPKRQAVPGLSTQCDVSAV*RGTMAF Trigger: AAAAGCCATAGTGCCTCTTCAGACAGCAGACACATC...ACACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGCCACAGACTTAATTTCCTATACTCTTCAGTGGACCACCACAGGGGTCTGCTCAGGAGCATCCCCTaGATTTCCTACTCTTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSHRLNFLYSSVDHHRGLLRSIP*ISYSSS Trigger: GCTCGAAGAGTAGGAAATTCAGGGGATGCTCCTGAG...CAGACCCCTGTGGTGGTCCACTGAAGAGTATAGGAAATTAAGTCTGTGGCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | TCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCAGGAGTCGCTGCCCTCTaGCTGGATCACCTTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFHLVAGSVSMKLVIQKSGVAAL*LDHLVL Trigger: CAGGACAAGGTGATCCAGGCAGAGGGCAGCGACTCC...TGACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCTCTCGTGCCTGCCTCTaGCCAAAAGGAAAGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VWGFPKRRMMKSAEVSSPSRACL*PKGKHL Trigger: AAGATGCTTTCCTTTTGGGCAGAGGCAGGCACGAGA...GGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCGTGAGAGGACCCAGGTaGAAATCGGTCTTCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VWGFPKRRMMKSAEVSSPVRGPR*KSVFSS Trigger: AGAACTGAAGACCGATTTGCACCTGGGTCCTCTCAC...GGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | TGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCCAGGTGAGAGGACCCAGGTaGAAATCGGTCTTCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WGFPKRRMMKSAEVSSPQVRGPR*KSVFSS Trigger: AGAACTGAAGACCGATTTGCACCTGGGTCCTCTCAC...CTGGGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTAGAGGACTAAGCACTGATGGCTaGTCCCTACCCCTTTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KQSVHAFHGAIACGVTRGLSTDG*SLPLFP Trigger: AGGGAAAAGGGGTAGGGAGCAGCCATCAGTGCTTAG...TCCTCTAGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | GCCTTAAGAGGTCATCCACTCTATAGAACTCATTCTGAGCTGGGAAGCAGCAGTCTAAGCACTGATGGCTaGTCCCTACCCCTTTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALRGHPLYRTHSELGSSSLSTDG*SLPLFP Trigger: AGGGAAAAGGGGTAGGGAGCAGCCATCAGTGCTTAG...ACTGCTGCTTCCCAGCTCAGAATGAGTTCTATAGAGTGGATGACCTCTTAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | AGACAATGGTTTGAATACCAGTCTCCCTTCTATGTGGAGGCTTCCTGCAGCTTCTCTCTTCCCACAGTGTaGCTCAGAGGAGAGGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RQWFEYQSPFYVEASCSFSLPTV*LRGEVR Trigger: TCTGACCTCTCCTCTGAGGCACACTGTGGGAAGAGA...GAAGCTGCAGGAAGCCTCCACATAGAAGGGAGACTGGTATTCAAACCATTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | TTTGCTTTCCCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTGTCTTCCATCACAACTaGTACAGGCTGATCAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: FAFPFAGHFLKDRLCRVCVFHHN*YRLINS Trigger: GGAGTTGATCAGCCTGTAGCAGTTGTGATGGAAGAC...ACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGGGAAAGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTGAGTGAGGGTTTAAAGCCTGGCAACCTTAGGTTCACCTCTTCTGTTTTCGGCTCTGGCAGTCCCTaGTTTCCAGGCAGTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SVSEGLKPGNLRFTSSVFGSGSP*FPGSSE Trigger: TTCTGAACTGCCTGGAAAGCAGGGACTGCCAGAGCC...GAAAACAGAAGAGGTGAACCTAAGGTTGCCAGGCTTTAAACCCTCACTCACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168936.2 |
||
| CDS-3UTR GCA 90 bp | GTCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCCTCAGCATAAGGCTTTaGTGGGTGCAGCCGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VIPFGSWLCLHETGYPKVLSIRL*WVQPLL Trigger: GAGGAGCGGCTGCACCCAGCAAAGCCTTATGCTGAG...GACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTAGAGGACTTTCCCGCTTATGCTaGGGAGACAGTTCCCGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KQSVHAFHGAIACGVTRGLSRLC*GDSSRD Trigger: ATCACGGGAACTGTCTCCCCAGCATAAGCGGGAAAG...TCCTCTAGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | TGCCAGCAGCAGTGTTGGTGCCCAGGAAAAGAGATGTACCAGATCTGTCTGTTTTCTCAGTGCCTGGCTTaGGAGCTCCTTTCCAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: CQQQCWCPGKEMYQICLFSQCLA*ELLSKL Trigger: AAGTTTGGAAAGGAGCTCCCAAGCCAGGCACTGAGA...AAACAGACAGATCTGGTACATCTCTTTTCCTGGGCACCAACACTGCTGCTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | TGTGCCGGGTCTGTCTACTCAGTGTGGGGATTTCCTAAGAGGAGAATGATGAAGTCTCAGTGCCTGGCTTaGGAGCTCCTTTCCAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: CAGSVYSVWGFPKRRMMKSQCLA*ELLSKL Trigger: AAGTTTGGAAAGGAGCTCCCAAGCCAGGCACTGAGA...CTTCATCATTCTCCTCTTAGGAAATCCCCACACTGAGTAGACAGACCCGGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTCAGAAGATTCAGCAACAAGCAAACAGTTCTTAACTCCCCGTGTGGTCAGTCCACTCTCAGTGCCTaGCTTGGGAGCTCCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CFRRFSNKQTVLNSPCGQSTLSA*LGSSFP Trigger: TGGAAAGGAGCTCCCAAGCCAGGCACTGAGAGTGGA...CTGACCACACGGGGAGTTAAGAACTGTTTGCTTGTTGCTGAATCTTCTGAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGAAAGGTGATGCCAGCAGCAGTGTTGGTGCCCAGGAAAAGAGATGTACCATTTGGGCTCTGGCTCTaGAGTGATAGTTGTGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RGKVMPAAVLVPRKRDVPFGLWL*SDSCVH Trigger: GTGAACACAACTATCACTCCAGAGCCAGAGCCCAAA...TGGTACATCTCTTTTCCTGGGCACCAACACTGCTGCTGGCATCACCTTTCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | ATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTGTTTTGGGCTCTGGCTCTaGAGTGATAGTTGTGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ICWALPKRQAVPGLSTQCFGLWL*SDSCVH Trigger: GTGAACACAACTATCACTCCAGAGCCAGAGCCCAAA...ACACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | TGTGCCGGGTCTGTCTACTCAGTGTGGGGATTTCCTAAGAGGAGAATGATGAAGCCTGATTGTCTCGGCTaGGGGCACATGACTATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CAGSVYSVWGFPKRRMMKPDCLG*GHMTIL Trigger: AAGAATAGTCATGTGCCCCCAGCCGAGACAATCAGG...CTTCATCATTCTCCTCTTAGGAAATCCCCACACTGAGTAGACAGACCCGGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | GTCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCAACTGGCTCAGGCTCTaGCAGTCCCTGCTTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VIPFGSWLCLHETGYPKVNWLRL*QSLLSR Trigger: CCTGGAAAGCAGGGACTGCCAGAGCCTGAGCCAGTT...GACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | AGTGAGCAGGTAACCACTTCACTCCAGGATTTATCAAGTGTGAGTGAGGGTTTAAACTGGCTCAGGCTCTaGCAGTCCCTGCTTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SEQVTTSLQDLSSVSEGLNWLRL*QSLLSR Trigger: CCTGGAAAGCAGGGACTGCCAGAGCCTGAGCCAGTT...TAAACCCTCACTCACACTTGATAAATCCTGGAGTGAAGTGGTTACCTGCTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168936.2 |
||
| CDS-3UTR CCA 90 bp | CGAGTTGTCATCCTTAGTGAGCAGGTAACCACTTCACTCCAGGATTTATCAAGTCTCCTCAGTCCAAACTaGCTCAGGCTCTGGCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVVILSEQVTTSLQDLSSLLSPN*LRLWQS Trigger: GGACTGCCAGAGCCTGAGCCAGTTTGGACTGAGGAG...ACTTGATAAATCCTGGAGTGAAGTGGTTACCTGCTCACTAAGGATGACAACTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168936.2 |
||
| CDS-3UTR TCA 90 bp | ATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTGTTTCTCCTTCATCGTATaGCATAGATCCTCTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ICWALPKRQAVPGLSTQCFSFIV*HRSSAL Trigger: GAGAGCAGAGGATCTATGTCATACGATGAAGGAGAA...ACACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | AGCAAAAGGGACTGGGCTTTGATATACAAACTGCTTACCATGGAGCAGAGGAGAGGGAGACAGTTCCCGTaGTGTATGCTTGGACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SKRDWALIYKLLTMEQRRGRQFP*CMLGHR Trigger: TCTGTGTCCAAGCATACATCACGGGAACTGTCTCCC...TCTCCTCTGCTCCATGGTAAGCAGTTTGTATATCAAAGCCCAGTCCCTTTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGAAAGGTGATGCCAGCAGCAGTGTTGGTGCCCAGGAAAAGAGATGTACCAAATAGTGTTCGTTACTaGGAGCAAACTCCCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGKVMPAAVLVPRKRDVPNSVRY*EQTPCS Trigger: GGAACAGGGAGTTTGCTCTCAGTAACGAACACTATT...TGGTACATCTCTTTTCCTGGGCACCAACACTGCTGCTGGCATCACCTTTCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GCCCCTCTGTTTTTATCAGCAGAGAAGAGCCACAGACTTAATTTCCTATACTCTGTAACGGCTAAGCACTaGTGGCTGCTCCCTACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: APLFLSAEKSHRLNFLYSVTAKH*WLLPTP Trigger: AGGGGTAGGGAGCAGCCATCAGTGCTTAGCCGTTAC...AGAGTATAGGAAATTAAGTCTGTGGCTCTTCTCTGCTGATAAAAACAGAGGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GTCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCGGAGGCTTTTTGAGATaGGGAGAGAGCTCCGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: VIPFGSWLCLHETGYPKVGGFLR*GESSDG Trigger: GCCATCGGAGCTCTCTCCTCATCTCAAAAAGCCTCC...GACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GTCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCGGGCTGAAGGGCCTTTaGTTTTTCACCCCAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VIPFGSWLCLHETGYPKVGLKGL*FFTPAQ Trigger: CTGTGCTGGGGTGAAAAATCAAAGGCCCTTCAGCCC...GACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | CCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTTTTTGTTTCCTGACCTaGAGCTTTATCTCCTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PFAGHFLKDRLCRVCLLSFCFLT*SFISSS Trigger: GCTAGAGGAGATAAAGCTGCAGGTCAGGAAACAAAA...ACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | AGACAATGGTTTGAATACCAGTCTCCCTTCTATGTGGAGGCTTCCTGCAGCTTCGTGAGAGGACCCAGGTaGAAATCGGTCTTCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RQWFEYQSPFYVEASCSFVRGPR*KSVFSS Trigger: AGAACTGAAGACCGATTTGCACCTGGGTCCTCTCAC...GAAGCTGCAGGAAGCCTCCACATAGAAGGGAGACTGGTATTCAAACCATTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | TGTGCCGGGTCTGTCTACTCAGTGTGGGGATTTCCTAAGAGGAGAATGATGAAGGTCTTCCATCACAACTaGTACAGGCTGATCAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: CAGSVYSVWGFPKRRMMKVFHHN*YRLINS Trigger: GGAGTTGATCAGCCTGTAGCAGTTGTGATGGAAGAC...CTTCATCATTCTCCTCTTAGGAAATCCCCACACTGAGTAGACAGACCCGGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | CCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTTTTATCTCCTCTAGCTaGCTGGCTAAGCTTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PFAGHFLKDRLCRVCLLSFISSS*LAKLLF Trigger: AAACAGAAGCTTAGCCAGCCAGCTAGAGGAGATAAA...ACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTCAGAAGATTCAGCAACAAGCAAACAGTTCTTAACTCCCCGTGTGGTCAGCTTTCCCGCTTATGCTaGGGAGACAGTTCCCGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CFRRFSNKQTVLNSPCGQLSRLC*GDSSRD Trigger: ATCACGGGAACTGTCTCCCCAGCATAAGCGGGAAAG...CTGACCACACGGGGAGTTAAGAACTGTTTGCTTGTTGCTGAATCTTCTGAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | GTAGCTTCCCATTTGGGAGTCAAAGAATGGTCCATGCTACCTTGGGGACAGAGATTTGGGCTCTGGCTCTaGAGTGATAGTTGTGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VASHLGVKEWSMLPWGQRFGLWL*SDSCVH Trigger: GTGAACACAACTATCACTCCAGAGCCAGAGCCCAAA...TCTCTGTCCCCAAGGTAGCATGGACCATTCTTTGACTCCCAAATGGGAAGCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | CCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTAGCACAGTTGGCATCTaGGAATTCTATAGCATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PFAGHFLKDRLCRVCLLSSTVGI*EFYSIG Trigger: TCCAATGCTATAGAATTCCCAGATGCCAACTGTGCT...ACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | AGCAAAAGGGACTGGGCTTTGATATACAAACTGCTTACCATGGAGCAGAGGAGACCTGGATGTTGCTGGTaGATGTATGCCTCTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SKRDWALIYKLLTMEQRRPGCCW*MYASPL Trigger: CAAGGGAGAGGCATACATCCACCAGCAACATCCAGG...TCTCCTCTGCTCCATGGTAAGCAGTTTGTATATCAAAGCCCAGTCCCTTTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGCCACAGACTTAATTTCCTATACTCTTCAGTGGACCACCACAGGGGTCTGCCTGATTGTCTCGGCTaGGGGCACATGACTATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KSHRLNFLYSSVDHHRGLPDCLG*GHMTIL Trigger: AAGAATAGTCATGTGCCCCCAGCCGAGACAATCAGG...CAGACCCCTGTGGTGGTCCACTGAAGAGTATAGGAAATTAAGTCTGTGGCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGGAAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTTCTGAAGAGGCACTATaGCTTTTCCACCTGATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGKQSVHAFHGAIACGVTSEEAL*LFHLIV Trigger: GACAATCAGGTGGAAAAGCCATAGTGCCTCTTCAGA...AGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTTCCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTAAGAGGTCATCCACTCTATAGAACTCATTCTGAGCTGGGAAGCAGCAGTCAGATGGCTGTGACCTaGGCTGCTCAAGTTCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ALRGHPLYRTHSELGSSSQMAVT*AAQVLR Trigger: TCTTAGAACTTGAGCAGCCCAGGTCACAGCCATCTG...ACTGCTGCTTCCCAGCTCAGAATGAGTTCTATAGAGTGGATGACCTCTTAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGTGTTTTCAGAAGTGATATGTCTTTCGACCTTGAAATCAGAGTCAGTCTAGCGGTGAGGCTACTTTaGGTCCTCCTCGGGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGVFRSDMSFDLEIRVSLAVRLL*VLLGES Trigger: GCTCTCCCCGAGGAGGACCCAAAGTAGCCTCACCGC...TAGACTGACTCTGATTTCAAGGTCGAAAGACATATCACTTCTGAAAACACCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | AGCAAAAGGGACTGGGCTTTGATATACAAACTGCTTACCATGGAGCAGAGGAGATCCATGCTTGATGAGTaGTTGCAGGAGGCAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SKRDWALIYKLLTMEQRRSMLDE*LQEAAV Trigger: CACTGCTGCCTCCTGCAACCACTCATCAAGCATGGA...TCTCCTCTGCTCCATGGTAAGCAGTTTGTATATCAAAGCCCAGTCCCTTTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR CAA 72 bp | TTCCCATTTGGGAGTCAAAGAATGGTCCATGCTACCTaGGGGACAGAGATAGGAGAGAGGACTACTCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: FPFGSQRMVHAT*GTEIGERTTHA Trigger: TGCATGAGTAGTCCTCTCTCCTATCTCTGTCCCCAAGGTAGCATGGACCATTCTTTGACTCCCAAATGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GTAGCTTCCCATTTGGGAGTCAAAGAATGGTCCATGCTACCTTGGGGACAGAGATTCTCCTTCATCGTATaGCATAGATCCTCTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VASHLGVKEWSMLPWGQRFSFIV*HRSSAL Trigger: GAGAGCAGAGGATCTATGTCATACGATGAAGGAGAA...TCTCTGTCCCCAAGGTAGCATGGACCATTCTTTGACTCCCAAATGGGAAGCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGAAAGGTGATGCCAGCAGCAGTGTTGGTGCCCAGGAAAAGAGATGTACCAACTCTTTTTGTTTCCTaGCCTGCAGCTTTATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RGKVMPAAVLVPRKRDVPTLFVS*PAALSP Trigger: AGGAGATAAAGCTGCAGGTCAGGAAACAAAAAGAGT...TGGTACATCTCTTTTCCTGGGCACCAACACTGCTGCTGGCATCACCTTTCCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GTAGCTTCCCATTTGGGAGTCAAAGAATGGTCCATGCTACCTTGGGGACAGAGAAATAGTGTTCGTTACTaGGAGCAAACTCCCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VASHLGVKEWSMLPWGQRNSVRY*EQTPCS Trigger: GGAACAGGGAGTTTGCTCTCAGTAACGAACACTATT...TCTCTGTCCCCAAGGTAGCATGGACCATTCTTTGACTCCCAAATGGGAAGCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GTAGCTTCCCATTTGGGAGTCAAAGAATGGTCCATGCTACCTTGGGGACAGAGACTGCCCTTTTGTTTGTaGAAACTGGAGAAGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VASHLGVKEWSMLPWGQRLPFCL*KLEKKP Trigger: AGGCTTCTTCTCCAGTTTTCACAAACAAAAGGGCAG...TCTCTGTCCCCAAGGTAGCATGGACCATTCTTTGACTCCCAAATGGGAAGCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | TGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCCAGCTGCCCTTTTGTTTGTaGAAACTGGAGAAGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WGFPKRRMMKSAEVSSPQLPFCL*KLEKKP Trigger: AGGCTTCTTCTCCAGTTTTCACAAACAAAAGGGCAG...CTGGGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCCGGGTCTGTCTACTCAGTGTGGGGATTTCCTAAGAGGAGAATGATGAAGCTGCCCTTTTGTTTGTaGAAACTGGAGAAGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CAGSVYSVWGFPKRRMMKLPFCL*KLEKKP Trigger: AGGCTTCTTCTCCAGTTTTCACAAACAAAAGGGCAG...CTTCATCATTCTCCTCTTAGGAAATCCCCACACTGAGTAGACAGACCCGGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | CCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTGGCAATGAAAAGCCCTaGAGTATATTTTCTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PFAGHFLKDRLCRVCLLSGNEKP*SIFSWL Trigger: AAGCCAAGAAAATATACTTCAGGGCTTTTCATTGCC...ACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTAAAAGGCTTAATGCACTTTGAACTGCATAAATCTGAGGCCCTCAACAGGGTCCAGGTCATCATCTaGGTCTGGCTTCTCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLKGLMHFELHKSEALNRVQVII*VWLLSA Trigger: GGCAGAGAGAAGCCAGACTCAGATGATGACCTGGAC...CCTGTTGAGGGCCTCAGATTTATGCAGTTCAAAGTGCATTAAGCCTTTTAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | ATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTGTGTGATGTCATGTTTATaGATAGAGAGCTCAAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ICWALPKRQAVPGLSTQCVMSCL*IESSRG Trigger: CCCTCTTGAGCTCTCTATTCATAAACATGACATCAC...ACACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | TCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCATATGGCTTTTCCACCTaGTTGTCTCGGCTGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SFHLVAGSVSMKLVIQKSYGFST*LSRLGA Trigger: TGCCCCCAGCCGAGACAATCAGGTGGAAAAGCCATA...TGACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GCCTTAAGAGGTCATCCACTCTATAGAACTCATTCTGAGCTGGGAAGCAGCAGTGATGTGTCTGCTGTCTaGAGAGGCACTATGGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ALRGHPLYRTHSELGSSSDVSAV*RGTMAF Trigger: AAAAGCCATAGTGCCTCTTCAGACAGCAGACACATC...ACTGCTGCTTCCCAGCTCAGAATGAGTTCTATAGAGTGGATGACCTCTTAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GTCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCCTCAGGAGCATCCCCTaGATTTCCTACTCTTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VIPFGSWLCLHETGYPKVLRSIP*ISYSSS Trigger: GCTCGAAGAGTAGGAAATTCAGGGGATGCTCCTGAG...GACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | CTTGGTGTTTTCAGAAGTGATATGTCTTTCGACCTTGAAATCAGAGTCAGTCTAGCGGGTGAGCACCTCTaGTGCGGTGAGGCTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGVFRSDMSFDLEIRVSLAGEHL*CGEATL Trigger: CAAAGTAGCCTCACCGCATCAGAGGTGCTCACCCGC...TAGACTGACTCTGATTTCAAGGTCGAAAGACATATCACTTCTGAAAACACCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | CCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTTCTGACACTAAACTCTaGTCAGTTTTATCTAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PFAGHFLKDRLCRVCLLSSDTKL*SVLSKR Trigger: CCGCTTAGATAAAACTGAGCAGAGTTTAGTGTCAGA...ACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGAAAGGTGATGCCAGCAGCAGTGTTGGTGCCCAGGAAAAGAGATGTACCATTTTGTTTCCTGACCTaGAGCTTTATCTCCTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGKVMPAAVLVPRKRDVPFCFLT*SFISSS Trigger: GCTAGAGGAGATAAAGCTGCAGGTCAGGAAACAAAA...TGGTACATCTCTTTTCCTGGGCACCAACACTGCTGCTGGCATCACCTTTCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGGAAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTTTTTGTTTCCTGACCTaGAGCTTTATCTCCTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGKQSVHAFHGAIACGVTFCFLT*SFISSS Trigger: GCTAGAGGAGATAAAGCTGCAGGTCAGGAAACAAAA...AGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTTCCCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGGAAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTCATGTTGGAGGCTTTTaGTGCCCTTTTGTTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GGKQSVHAFHGAIACGVTHVGGF*CPFVCE Trigger: TTCACAAACAAAAGGGCAGCAAAAGCCTCCAACATG...AGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTTCCCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | GTCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCCTAAGCACTGATGGCTaGTCCCTACCCCTTTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VIPFGSWLCLHETGYPKVLSTDG*SLPLFP Trigger: AGGGAAAAGGGGTAGGGAGCAGCCATCAGTGCTTAG...GACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | CCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTTTAGAGGTGGATTTCTaGTTCTCCAATACAACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PFAGHFLKDRLCRVCLLSLEVDF*FSNTTS Trigger: TGAGGTTGTATTGGAGAAGCAGAAATCCACCTCTAA...ACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | TCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCAGACATGGTTGCTAATTaGTGTGAGCTCTGGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SFHLVAGSVSMKLVIQKSDMVAN*CELWGP Trigger: GGGCCCCCAGAGCTCACAGCAATTAGCAACCATGTC...TGACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | CCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTTCCTTTCCAGAAAAGTaGAAGCATTTCTCATGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PFAGHFLKDRLCRVCLLSSFPEK*KHFSCG Trigger: ACCACATGAGAAATGCTTCCACTTTTCTGGAAAGGA...ACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR CCA 90 bp | CCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTTTTCTGATTTGTCTCTaGTTTCATTCTCGACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PFAGHFLKDRLCRVCLLSFLICL*FHSRPA Trigger: AGCAGGTCGAGAATGAAACCAGAGACAAATCAGAAA...ACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR CCA 90 bp | TTTGCTTTCCCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTTTTATCTCCTCTAGCTaGCTGGCTAAGCTTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FAFPFAGHFLKDRLCRVCFISSS*LAKLLF Trigger: AAACAGAAGCTTAGCCAGCCAGCTAGAGGAGATAAA...ACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGGGAAAGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR CCA 90 bp | AGACAATGGTTTGAATACCAGTCTCCCTTCTATGTGGAGGCTTCCTGCAGCTTCTTTGGGCTCTGGCTCTaGAGTGATAGTTGTGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RQWFEYQSPFYVEASCSFFGLWL*SDSCVH Trigger: GTGAACACAACTATCACTCCAGAGCCAGAGCCCAAA...GAAGCTGCAGGAAGCCTCCACATAGAAGGGAGACTGGTATTCAAACCATTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR CCA 90 bp | TGCTTCAGAAGATTCAGCAACAAGCAAACAGTTCTTAACTCCCCGTGTGGTCAGCTGTGGTTTGGGCTCTaGCTCTGGAGTGATAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CFRRFSNKQTVLNSPCGQLWFGL*LWSDSC Trigger: ACAACTATCACTCCAGAGCCAGAGCCCAAACCACAG...CTGACCACACGGGGAGTTAAGAACTGTTTGCTTGTTGCTGAATCTTCTGAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR CCA 90 bp | TTTGCTTTCCCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTAGCACAGTTGGCATCTaGGAATTCTATAGCATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FAFPFAGHFLKDRLCRVCSTVGI*EFYSIG Trigger: TCCAATGCTATAGAATTCCCAGATGCCAACTGTGCT...ACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGGGAAAGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR CCA 90 bp | TCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCAAATTGCTGTGAGCTCTaGGGGCCCCACCTGGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: SFHLVAGSVSMKLVIQKSNCCEL*GPHLDV Trigger: AACATCCAGGTGGGGCCCCCAGAGCTCACAGCAATT...TGACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR CCA 90 bp | GTCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCTCCATGCTTGATGAGTaGTTGCAGGAGGCAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VIPFGSWLCLHETGYPKVSMLDE*LQEAAV Trigger: CACTGCTGCCTCCTGCAACCACTCATCAAGCATGGA...GACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR TCA 90 bp | AAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTAGAGGATTCTCCTTCATCGTATaGCATAGATCCTCTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KQSVHAFHGAIACGVTRGFSFIV*HRSSAL Trigger: GAGAGCAGAGGATCTATGTCATACGATGAAGGAGAA...TCCTCTAGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR TCA 90 bp | TGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCCAGTCAACCATTCGTTTCTaGAGCCGCTCAATTTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: WGFPKRRMMKSAEVSSPQSTIRF*SRSISD Trigger: ATCTGAAATTGAGCGGCTTCAGAAACGAATGGTTGA...CTGGGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR TCA 90 bp | GCCCCTCTGTTTTTATCAGCAGAGAAGAGCCACAGACTTAATTTCCTATACTCTGGGAGACAGTTCCCGTaGTGTATGCTTGGACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: APLFLSAEKSHRLNFLYSGRQFP*CMLGHR Trigger: TCTGTGTCCAAGCATACATCACGGGAACTGTCTCCC...AGAGTATAGGAAATTAAGTCTGTGGCTCTTCTCTGCTGATAAAAACAGAGGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR TCA 90 bp | AAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTAGAGGAAATAGTGTTCGTTACTaGGAGCAAACTCCCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KQSVHAFHGAIACGVTRGNSVRY*EQTPCS Trigger: GGAACAGGGAGTTTGCTCTCAGTAACGAACACTATT...TCCTCTAGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR TCA 90 bp | GCCTTAAGAGGTCATCCACTCTATAGAACTCATTCTGAGCTGGGAAGCAGCAGTAATAGTGTTCGTTACTaGGAGCAAACTCCCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALRGHPLYRTHSELGSSSNSVRY*EQTPCS Trigger: GGAACAGGGAGTTTGCTCTCAGTAACGAACACTATT...ACTGCTGCTTCCCAGCTCAGAATGAGTTCTATAGAGTGGATGACCTCTTAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR TCA 90 bp | TCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCATCTGAGGAGGCTTTTTaGGATGAGGAGAGAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SFHLVAGSVSMKLVIQKSSEEAF*DEERAP Trigger: CGGAGCTCTCTCCTCATCTCAAAAAGCCTCCTCAGA...TGACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR TCA 90 bp | AGCAAAAGGGACTGGGCTTTGATATACAAACTGCTTACCATGGAGCAGAGGAGAGATGTGTCTGCTGTCTaGAGAGGCACTATGGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SKRDWALIYKLLTMEQRRDVSAV*RGTMAF Trigger: AAAAGCCATAGTGCCTCTTCAGACAGCAGACACATC...TCTCCTCTGCTCCATGGTAAGCAGTTTGTATATCAAAGCCCAGTCCCTTTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR TCA 90 bp | TCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCAAGGCATTCCGCACTGTaGTGTGTCTGCTGTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SFHLVAGSVSMKLVIQKSRHSAL*CVCCLK Trigger: CTTCAGACAGCAGACACATCACAGTGCGGAATGCCT...TGACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR TCA 90 bp | GCCCCTCTGTTTTTATCAGCAGAGAAGAGCCACAGACTTAATTTCCTATACTCTAGGCATTCCGCACTGTaGTGTGTCTGCTGTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: APLFLSAEKSHRLNFLYSRHSAL*CVCCLK Trigger: CTTCAGACAGCAGACACATCACAGTGCGGAATGCCT...AGAGTATAGGAAATTAAGTCTGTGGCTCTTCTCTGCTGATAAAAACAGAGGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR TCA 90 bp | TCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCACTCAGGAGCATCCCCTaGATTTCCTACTCTTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFHLVAGSVSMKLVIQKSLRSIP*ISYSSS Trigger: GCTCGAAGAGTAGGAAATTCAGGGGATGCTCCTGAG...TGACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR TCA 90 bp | TTCCTAAAAGGCTTAATGCACTTTGAACTGCATAAATCTGAGGCCCTCAACAGGCTCAGGAGCATCCCCTaGATTTCCTACTCTTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLKGLMHFELHKSEALNRLRSIP*ISYSSS Trigger: GCTCGAAGAGTAGGAAATTCAGGGGATGCTCCTGAG...CCTGTTGAGGGCCTCAGATTTATGCAGTTCAAAGTGCATTAAGCCTTTTAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR GCA 90 bp | TTTGCTTTCCCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTTCTGACACTAAACTCTaGTCAGTTTTATCTAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FAFPFAGHFLKDRLCRVCSDTKL*SVLSKR Trigger: CCGCTTAGATAAAACTGAGCAGAGTTTAGTGTCAGA...ACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGGGAAAGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR GCA 90 bp | GGAGCAAAGGGAGGGAAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTAAGAAGCCTGTTTGCTaGTTAGAGAATAGTGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GAKGGKQSVHAFHGAIACKKPVC*LENSVR Trigger: ACGAACACTATTCTCTAAGCAGCAAACAGGCTTCTT...ACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTTCCCTCCCTTTGCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR GCA 90 bp | AGAGGAAAGGTGATGCCAGCAGCAGTGTTGGTGCCCAGGAAAAGAGATGTACCAAAGAAGCCTGTTTGCTaGTTAGAGAATAGTGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RGKVMPAAVLVPRKRDVPKKPVC*LENSVR Trigger: ACGAACACTATTCTCTAAGCAGCAAACAGGCTTCTT...TGGTACATCTCTTTTCCTGGGCACCAACACTGCTGCTGGCATCACCTTTCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR GCA 90 bp | TGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCCAGCATGTTGGAGGCTTTTaGTGCCCTTTTGTTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WGFPKRRMMKSAEVSSPQHVGGF*CPFVCE Trigger: TTCACAAACAAAAGGGCAGCAAAAGCCTCCAACATG...CTGGGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR GCA 90 bp | TTCCTAAAAGGCTTAATGCACTTTGAACTGCATAAATCTGAGGCCCTCAACAGGTCTCTTCCCACAGTGTaGCTCAGAGGAGAGGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLKGLMHFELHKSEALNRSLPTV*LRGEVR Trigger: TCTGACCTCTCCTCTGAGGCACACTGTGGGAAGAGA...CCTGTTGAGGGCCTCAGATTTATGCAGTTCAAAGTGCATTAAGCCTTTTAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR GCA 90 bp | AGAGGAAAGGTGATGCCAGCAGCAGTGTTGGTGCCCAGGAAAAGAGATGTACCATTAGAGGTGGATTTCTaGTTCTCCAATACAACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RGKVMPAAVLVPRKRDVPLEVDF*FSNTTS Trigger: TGAGGTTGTATTGGAGAAGCAGAAATCCACCTCTAA...TGGTACATCTCTTTTCCTGGGCACCAACACTGCTGCTGGCATCACCTTTCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR GCA 90 bp | TTTGCTTTCCCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTTTAGAGGTGGATTTCTaGTTCTCCAATACAACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FAFPFAGHFLKDRLCRVCLEVDF*FSNTTS Trigger: TGAGGTTGTATTGGAGAAGCAGAAATCCACCTCTAA...ACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGGGAAAGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR GCA 90 bp | GTGTGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCTCAGCTTCTGTGAGCTaGAAGGTGATGTCATGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: VWGFPKRRMMKSAEVSSPSASVS*KVMSCL Trigger: TAAACATGACATCACCTTGCAGCTCACAGAAGCTGA...GGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR CCA 90 bp | AGAGGAAAGGTGATGCCAGCAGCAGTGTTGGTGCCCAGGAAAAGAGATGTACCAAGGCTCAAACAAAGCTaGGAACATTCATTCTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: RGKVMPAAVLVPRKRDVPRLKQS*EHSFLL Trigger: GAGTAAGAATGAATGTTCCCAGCTTTGTTTGAGCCT...TGGTACATCTCTTTTCCTGGGCACCAACACTGCTGCTGGCATCACCTTTCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR CCA 90 bp | GGAGCAAAGGGAGGGAAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGAAGCATTTCTCATGTaGTCTCGGTTCATTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GAKGGKQSVHAFHGAIACEAFLM*SRFIFL Trigger: CAAGAAAATGAACCGAGACCACATGAGAAATGCTTC...ACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTTCCCTCCCTTTGCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR CCA 90 bp | AGAGGAAAGGTGATGCCAGCAGCAGTGTTGGTGCCCAGGAAAAGAGATGTACCATCCTTTCCAGAAAAGTaGAAGCATTTCTCATGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RGKVMPAAVLVPRKRDVPSFPEK*KHFSCG Trigger: ACCACATGAGAAATGCTTCCACTTTTCTGGAAAGGA...TGGTACATCTCTTTTCCTGGGCACCAACACTGCTGCTGGCATCACCTTTCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR CCA 90 bp | GGAGCAAAGGGAGGGAAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTTTTCTGATTTGTCTCTaGTTTCATTCTCGACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GAKGGKQSVHAFHGAIACFLICL*FHSRPA Trigger: AGCAGGTCGAGAATGAAACCAGAGACAAATCAGAAA...ACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTTCCCTCCCTTTGCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR CCA 90 bp | AAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTAGAGGATCTCCTCTAGCTGGCTaGCTAAGCTTCTGTTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: KQSVHAFHGAIACGVTRGSPLAG*LSFCFY Trigger: ATAGAAACAGAAGCTTAGCCAGCCAGCTAGAGGAGA...TCCTCTAGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| 3UTR CAA 72 bp | TCCTGCAGCTTCTGGCTTGGGCCCAAAGGTTACATCTaGGTGTTTTCAGAAGTGATATGTCTTTCGACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SCSFWLGPKGYI*VFSEVICLSTL Trigger: CAAGGTCGAAAGACATATCACTTCTGAAAACACCAAGATGTAACCTTTGGGCCCAAGCCAGAAGCTGCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR TCA 90 bp | AGACAATGGTTTGAATACCAGTCTCCCTTCTATGTGGAGGCTTCCTGCAGCTTCACTCTTTTTGTTTCCTaGCCTGCAGCTTTATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RQWFEYQSPFYVEASCSFTLFVS*PAALSP Trigger: AGGAGATAAAGCTGCAGGTCAGGAAACAAAAAGAGT...GAAGCTGCAGGAAGCCTCCACATAGAAGGGAGACTGGTATTCAAACCATTGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR TCA 90 bp | TGCCAGCAGCAGTGTTGGTGCCCAGGAAAAGAGATGTACCAGATCTGTCTGTTTTTGGGCACAGATACATaGGTGGAATCACTAAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: CQQQCWCPGKEMYQICLFLGTDT*VESLNV Trigger: AACATTTAGTGATTCCACTCATGTATCTGTGCCCAA...AAACAGACAGATCTGGTACATCTCTTTTCCTGGGCACCAACACTGCTGCTGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | CTTGGTGTTTTCAGAAGTGATATGTCTTTCGACCTTGAAATCAGAGTCAGTCTAGGGCTGAAGGGCCTTTaGTTTTTCACCCCAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LGVFRSDMSFDLEIRVSLGLKGL*FFTPAQ Trigger: CTGTGCTGGGGTGAAAAATCAAAGGCCCTTCAGCCC...TAGACTGACTCTGATTTCAAGGTCGAAAGACATATCACTTCTGAAAACACCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | AATGACATCTACTTCACAAAGGTAGCCAAAGAGGATCCCTTTGAGTTGAAACAAGGGCTGAAGGGCCTTTaGTTTTTCACCCCAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: NDIYFTKVAKEDPFELKQGLKGL*FFTPAQ Trigger: CTGTGCTGGGGTGAAAAATCAAAGGCCCTTCAGCCC...TTGTTTCAACTCAAAGGGATCCTCTTTGGCTACCTTTGTGAAGTAGATGTCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GCCTTAAGAGGTCATCCACTCTATAGAACTCATTCTGAGCTGGGAAGCAGCAGTGTGATGTCATGTTTATaGATAGAGAGCTCAAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALRGHPLYRTHSELGSSSVMSCL*IESSRG Trigger: CCCTCTTGAGCTCTCTATTCATAAACATGACATCAC...ACTGCTGCTTCCCAGCTCAGAATGAGTTCTATAGAGTGGATGACCTCTTAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | AATGACATCTACTTCACAAAGGTAGCCAAAGAGGATCCCTTTGAGTTGAAACAATCGGCTGGGGGCACATaGCTATTCTTCTCCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: NDIYFTKVAKEDPFELKQSAGGT*LFFSTD Trigger: GTCTGTGGAGAAGAATAGTCATGTGCCCCCAGCCGA...TTGTTTCAACTCAAAGGGATCCTCTTTGGCTACCTTTGTGAAGTAGATGTCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGCCACAGACTTAATTTCCTATACTCTTCAGTGGACCACCACAGGGGTCTGATTCATTCTTACTCCTaGTCAAAGCCTCCTCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KSHRLNFLYSSVDHHRGLIHSYS*SKPPLA Trigger: AGCTAGAGGAGGCTTTGAGCAGGAGTAAGAATGAAT...CAGACCCCTGTGGTGGTCCACTGAAGAGTATAGGAAATTAAGTCTGTGGCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | TGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCCAGAAGAAGCCTGTTTGCTaGTTAGAGAATAGTGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: WGFPKRRMMKSAEVSSPQKKPVC*LENSVR Trigger: ACGAACACTATTCTCTAAGCAGCAAACAGGCTTCTT...CTGGGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | AGACAATGGTTTGAATACCAGTCTCCCTTCTATGTGGAGGCTTCCTGCAGCTTCCATGTTGGAGGCTTTTaGTGCCCTTTTGTTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RQWFEYQSPFYVEASCSFHVGGF*CPFVCE Trigger: TTCACAAACAAAAGGGCAGCAAAAGCCTCCAACATG...GAAGCTGCAGGAAGCCTCCACATAGAAGGGAGACTGGTATTCAAACCATTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | TGCCAGCAGCAGTGTTGGTGCCCAGGAAAAGAGATGTACCAGATCTGTCTGTTTTTAGAGGTGGATTTCTaGTTCTCCAATACAACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CQQQCWCPGKEMYQICLFLEVDF*FSNTTS Trigger: TGAGGTTGTATTGGAGAAGCAGAAATCCACCTCTAA...AAACAGACAGATCTGGTACATCTCTTTTCCTGGGCACCAACACTGCTGCTGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGCCACAGACTTAATTTCCTATACTCTTCAGTGGACCACCACAGGGGTCTGTCAGCTTCTGTGAGCTaGAAGGTGATGTCATGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KSHRLNFLYSSVDHHRGLSASVS*KVMSCL Trigger: TAAACATGACATCACCTTGCAGCTCACAGAAGCTGA...CAGACCCCTGTGGTGGTCCACTGAAGAGTATAGGAAATTAAGTCTGTGGCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCGAAGCATTTCTCATGTaGTCTCGGTTCATTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VWGFPKRRMMKSAEVSSPEAFLM*SRFIFL Trigger: CAAGAAAATGAACCGAGACCACATGAGAAATGCTTC...GGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | TCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCATCTCAGTGCCTGGCTTaGGAGCTCCTTTCCAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SFHLVAGSVSMKLVIQKSSQCLA*ELLSKL Trigger: AAGTTTGGAAAGGAGCTCCCAAGCCAGGCACTGAGA...TGACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | AGACAATGGTTTGAATACCAGTCTCCCTTCTATGTGGAGGCTTCCTGCAGCTTCAGCACAGTTGGCATCTaGGAATTCTATAGCATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RQWFEYQSPFYVEASCSFSTVGI*EFYSIG Trigger: TCCAATGCTATAGAATTCCCAGATGCCAACTGTGCT...GAAGCTGCAGGAAGCCTCCACATAGAAGGGAGACTGGTATTCAAACCATTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCTCTGTTTTTATCAGCAGAGAAGAGCCACAGACTTAATTTCCTATACTCTAGAGGGGAGCTGACATaGTTGCTAATTGCTGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: APLFLSAEKSHRLNFLYSRGELT*LLIAVS Trigger: GCTCACAGCAATTAGCAACCATGTCAGCTCCCCTCT...AGAGTATAGGAAATTAAGTCTGTGGCTCTTCTCTGCTGATAAAAACAGAGGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | GTCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCCTCTGCTCTATTCTTTaGAGACCCATCTCCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VIPFGSWLCLHETGYPKVLCSIL*RPISHS Trigger: AGAGTGGGAGATGGGTCTCCAAAGAATAGAGCAGAG...GACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | AGCAAAAGGGACTGGGCTTTGATATACAAACTGCTTACCATGGAGCAGAGGAGATCTGAAGAGGCACTATaGCTTTTCCACCTGATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SKRDWALIYKLLTMEQRRSEEAL*LFHLIV Trigger: GACAATCAGGTGGAAAAGCCATAGTGCCTCTTCAGA...TCTCCTCTGCTCCATGGTAAGCAGTTTGTATATCAAAGCCCAGTCCCTTTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GTCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCTTCTCCTTCATCGTATaGCATAGATCCTCTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VIPFGSWLCLHETGYPKVFSFIV*HRSSAL Trigger: GAGAGCAGAGGATCTATGTCATACGATGAAGGAGAA...GACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTAGAGGATTGGGCACAGATACATaGGTGGAATCACTAAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: KQSVHAFHGAIACGVTRGLGTDT*VESLNV Trigger: AACATTTAGTGATTCCACTCATGTATCTGTGCCCAA...TCCTCTAGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGCCACAGACTTAATTTCCTATACTCTTCAGTGGACCACCACAGGGGTCTGTCTGACACTAAACTCTaGTCAGTTTTATCTAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KSHRLNFLYSSVDHHRGLSDTKL*SVLSKR Trigger: CCGCTTAGATAAAACTGAGCAGAGTTTAGTGTCAGA...CAGACCCCTGTGGTGGTCCACTGAAGAGTATAGGAAATTAAGTCTGTGGCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | GCCTTAAGAGGTCATCCACTCTATAGAACTCATTCTGAGCTGGGAAGCAGCAGTAAGAAGCCTGTTTGCTaGTTAGAGAATAGTGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ALRGHPLYRTHSELGSSSKKPVC*LENSVR Trigger: ACGAACACTATTCTCTAAGCAGCAAACAGGCTTCTT...ACTGCTGCTTCCCAGCTCAGAATGAGTTCTATAGAGTGGATGACCTCTTAAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | GCCCCTCTGTTTTTATCAGCAGAGAAGAGCCACAGACTTAATTTCCTATACTCTGTCTTCCATCACAACTaGTACAGGCTGATCAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: APLFLSAEKSHRLNFLYSVFHHN*YRLINS Trigger: GGAGTTGATCAGCCTGTAGCAGTTGTGATGGAAGAC...AGAGTATAGGAAATTAAGTCTGTGGCTCTTCTCTGCTGATAAAAACAGAGGGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTAAAAGGCTTAATGCACTTTGAACTGCATAAATCTGAGGCCCTCAACAGGGTCTTCCATCACAACTaGTACAGGCTGATCAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLKGLMHFELHKSEALNRVFHHN*YRLINS Trigger: GGAGTTGATCAGCCTGTAGCAGTTGTGATGGAAGAC...CCTGTTGAGGGCCTCAGATTTATGCAGTTCAAAGTGCATTAAGCCTTTTAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTAGAGGAAGGCTCAAACAAAGCTaGGAACATTCATTCTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: KQSVHAFHGAIACGVTRGRLKQS*EHSFLL Trigger: GAGTAAGAATGAATGTTCCCAGCTTTGTTTGAGCCT...TCCTCTAGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTAAGAGGTCATCCACTCTATAGAACTCATTCTGAGCTGGGAAGCAGCAGTTCCTTTCCAGAAAAGTaGAAGCATTTCTCATGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ALRGHPLYRTHSELGSSSSFPEK*KHFSCG Trigger: ACCACATGAGAAATGCTTCCACTTTTCTGGAAAGGA...ACTGCTGCTTCCCAGCTCAGAATGAGTTCTATAGAGTGGATGACCTCTTAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | AGACAATGGTTTGAATACCAGTCTCCCTTCTATGTGGAGGCTTCCTGCAGCTTCTCCTTTCCAGAAAAGTaGAAGCATTTCTCATGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RQWFEYQSPFYVEASCSFSFPEK*KHFSCG Trigger: ACCACATGAGAAATGCTTCCACTTTTCTGGAAAGGA...GAAGCTGCAGGAAGCCTCCACATAGAAGGGAGACTGGTATTCAAACCATTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGGAAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTAGTTTCTCAATCTCTTaGTTAAGGTCTTTCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GGKQSVHAFHGAIACGVTSFSIS*LRSFTL Trigger: CAAAGTGAAAGACCTTAACCAAGAGATTGAGAAACT...AGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTTCCCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR CAA 72 bp | AATCAGGGTATCAAACACAGCAAAAGGGACTGGGCTTaGATATACAAACTGCTTACCATGGAGCAGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NQGIKHSKRDWA*IYKLLTMEQRR Trigger: TCTCCTCTGCTCCATGGTAAGCAGTTTGTATATCAAAGCCCAGTCCCTTTTGCTGTGTTTGATACCCTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GTCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCACTCTTTTTGTTTCCTaGCCTGCAGCTTTATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VIPFGSWLCLHETGYPKVTLFVS*PAALSP Trigger: AGGAGATAAAGCTGCAGGTCAGGAAACAAAAAGAGT...GACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR TCA 90 bp | GTCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCGTGATGTCATGTTTATaGATAGAGAGCTCAAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VIPFGSWLCLHETGYPKVVMSCL*IESSRG Trigger: CCCTCTTGAGCTCTCTATTCATAAACATGACATCAC...GACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | GTCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCTTTTGTTTCCTGACCTaGAGCTTTATCTCCTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VIPFGSWLCLHETGYPKVFCFLT*SFISSS Trigger: GCTAGAGGAGATAAAGCTGCAGGTCAGGAAACAAAA...GACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | CTTGGTGTTTTCAGAAGTGATATGTCTTTCGACCTTGAAATCAGAGTCAGTCTATCTCGTGCCTGCCTCTaGCCAAAAGGAAAGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGVFRSDMSFDLEIRVSLSRACL*PKGKHL Trigger: AAGATGCTTTCCTTTTGGGCAGAGGCAGGCACGAGA...TAGACTGACTCTGATTTCAAGGTCGAAAGACATATCACTTCTGAAAACACCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | GTCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCCATGTTGGAGGCTTTTaGTGCCCTTTTGTTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VIPFGSWLCLHETGYPKVHVGGF*CPFVCE Trigger: TTCACAAACAAAAGGGCAGCAAAAGCCTCCAACATG...GACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTCAGAAGATTCAGCAACAAGCAAACAGTTCTTAACTCCCCGTGTGGTCAGAGGCTCAAACAAAGCTaGGAACATTCATTCTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: CFRRFSNKQTVLNSPCGQRLKQS*EHSFLL Trigger: GAGTAAGAATGAATGTTCCCAGCTTTGTTTGAGCCT...CTGACCACACGGGGAGTTAAGAACTGTTTGCTTGTTGCTGAATCTTCTGAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | TGTGCCGGGTCTGTCTACTCAGTGTGGGGATTTCCTAAGAGGAGAATGATGAAGAGTTTCTCAATCTCTTaGTTAAGGTCTTTCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CAGSVYSVWGFPKRRMMKSFSIS*LRSFTL Trigger: CAAAGTGAAAGACCTTAACCAAGAGATTGAGAAACT...CTTCATCATTCTCCTCTTAGGAAATCCCCACACTGAGTAGACAGACCCGGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCCAGAGTTTCTCAATCTCTTaGTTAAGGTCTTTCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: WGFPKRRMMKSAEVSSPQSFSIS*LRSFTL Trigger: CAAAGTGAAAGACCTTAACCAAGAGATTGAGAAACT...CTGGGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTAAAAGGCTTAATGCACTTTGAACTGCATAAATCTGAGGCCCTCAACAGGTCTCCTCTAGCTGGCTaGCTAAGCTTCTGTTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: FLKGLMHFELHKSEALNRSPLAG*LSFCFY Trigger: ATAGAAACAGAAGCTTAGCCAGCCAGCTAGAGGAGA...CCTGTTGAGGGCCTCAGATTTATGCAGTTCAAAGTGCATTAAGCCTTTTAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCTCTGTTTTTATCAGCAGAGAAGAGCCACAGACTTAATTTCCTATACTCTTCTCCTCTAGCTGGCTaGCTAAGCTTCTGTTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: APLFLSAEKSHRLNFLYSSPLAG*LSFCFY Trigger: ATAGAAACAGAAGCTTAGCCAGCCAGCTAGAGGAGA...AGAGTATAGGAAATTAAGTCTGTGGCTCTTCTCTGCTGATAAAAACAGAGGGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | GTCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCAGCACAGTTGGCATCTaGGAATTCTATAGCATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VIPFGSWLCLHETGYPKVSTVGI*EFYSIG Trigger: TCCAATGCTATAGAATTCCCAGATGCCAACTGTGCT...GACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | AATGACATCTACTTCACAAAGGTAGCCAAAGAGGATCCCTTTGAGTTGAAACAAAGAGGGGAGCTGACATaGTTGCTAATTGCTGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NDIYFTKVAKEDPFELKQRGELT*LLIAVS Trigger: GCTCACAGCAATTAGCAACCATGTCAGCTCCCCTCT...TTGTTTCAACTCAAAGGGATCCTCTTTGGCTACCTTTGTGAAGTAGATGTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | TCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCATCTGAAGAGGCACTATaGCTTTTCCACCTGATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFHLVAGSVSMKLVIQKSSEEAL*LFHLIV Trigger: GACAATCAGGTGGAAAAGCCATAGTGCCTCTTCAGA...TGACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | AATGACATCTACTTCACAAAGGTAGCCAAAGAGGATCCCTTTGAGTTGAAACAACAGATGGCTGTGACCTaGGCTGCTCAAGTTCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NDIYFTKVAKEDPFELKQQMAVT*AAQVLR Trigger: TCTTAGAACTTGAGCAGCCCAGGTCACAGCCATCTG...TTGTTTCAACTCAAAGGGATCCTCTTTGGCTACCTTTGTGAAGTAGATGTCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | GTCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCTTAGGTAGTCTAGACTaGCCTTCCTTTTTGACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VIPFGSWLCLHETGYPKVLGSLD*PSFLTL Trigger: AAGAGTCAAAAAGGAAGGGCAGTCTAGACTACCTAA...GACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTAAAAGGCTTAATGCACTTTGAACTGCATAAATCTGAGGCCCTCAACAGGTTTATCTCCTCTAGCTaGCTGGCTAAGCTTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLKGLMHFELHKSEALNRFISSS*LAKLLF Trigger: AAACAGAAGCTTAGCCAGCCAGCTAGAGGAGATAAA...CCTGTTGAGGGCCTCAGATTTATGCAGTTCAAAGTGCATTAAGCCTTTTAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | AATGACATCTACTTCACAAAGGTAGCCAAAGAGGATCCCTTTGAGTTGAAACAACTCTGCTCTATTCTTTaGAGACCCATCTCCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: NDIYFTKVAKEDPFELKQLCSIL*RPISHS Trigger: AGAGTGGGAGATGGGTCTCCAAAGAATAGAGCAGAG...TTGTTTCAACTCAAAGGGATCCTCTTTGGCTACCTTTGTGAAGTAGATGTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGTGTTTTCAGAAGTGATATGTCTTTCGACCTTGAAATCAGAGTCAGTCTACTCTGCTCTATTCTTTaGAGACCCATCTCCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGVFRSDMSFDLEIRVSLLCSIL*RPISHS Trigger: AGAGTGGGAGATGGGTCTCCAAAGAATAGAGCAGAG...TAGACTGACTCTGATTTCAAGGTCGAAAGACATATCACTTCTGAAAACACCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GCCCCTCTGTTTTTATCAGCAGAGAAGAGCCACAGACTTAATTTCCTATACTCTTTGGGCACAGATACATaGGTGGAATCACTAAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: APLFLSAEKSHRLNFLYSLGTDT*VESLNV Trigger: AACATTTAGTGATTCCACTCATGTATCTGTGCCCAA...AGAGTATAGGAAATTAAGTCTGTGGCTCTTCTCTGCTGATAAAAACAGAGGGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | GCCCCTCTGTTTTTATCAGCAGAGAAGAGCCACAGACTTAATTTCCTATACTCTGGCAATGAAAAGCCCTaGAGTATATTTTCTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: APLFLSAEKSHRLNFLYSGNEKP*SIFSWL Trigger: AAGCCAAGAAAATATACTTCAGGGCTTTTCATTGCC...AGAGTATAGGAAATTAAGTCTGTGGCTCTTCTCTGCTGATAAAAACAGAGGGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | TCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCAGGCAATGAAAAGCCCTaGAGTATATTTTCTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFHLVAGSVSMKLVIQKSGNEKP*SIFSWL Trigger: AAGCCAAGAAAATATACTTCAGGGCTTTTCATTGCC...TGACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | GCCCCTCTGTTTTTATCAGCAGAGAAGAGCCACAGACTTAATTTCCTATACTCTTTAGGTAGTCTAGACTaGCCTTCCTTTTTGACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: APLFLSAEKSHRLNFLYSLGSLD*PSFLTL Trigger: AAGAGTCAAAAAGGAAGGGCAGTCTAGACTACCTAA...AGAGTATAGGAAATTAAGTCTGTGGCTCTTCTCTGCTGATAAAAACAGAGGGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTAAAAGGCTTAATGCACTTTGAACTGCATAAATCTGAGGCCCTCAACAGGTTTCTGATTTGTCTCTaGTTTCATTCTCGACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLKGLMHFELHKSEALNRFLICL*FHSRPA Trigger: AGCAGGTCGAGAATGAAACCAGAGACAAATCAGAAA...CCTGTTGAGGGCCTCAGATTTATGCAGTTCAAAGTGCATTAAGCCTTTTAGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | TCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCATTTCTGATTTGTCTCTaGTTTCATTCTCGACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFHLVAGSVSMKLVIQKSFLICL*FHSRPA Trigger: AGCAGGTCGAGAATGAAACCAGAGACAAATCAGAAA...TGACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR TCA 90 bp | AATGACATCTACTTCACAAAGGTAGCCAAAGAGGATCCCTTTGAGTTGAAACAAACTCTTTTTGTTTCCTaGCCTGCAGCTTTATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NDIYFTKVAKEDPFELKQTLFVS*PAALSP Trigger: AGGAGATAAAGCTGCAGGTCAGGAAACAAAAAGAGT...TTGTTTCAACTCAAAGGGATCCTCTTTGGCTACCTTTGTGAAGTAGATGTCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| 3UTR CAA 72 bp | TACTTCACAAAGGTAGCCAAAGAGGATCCCTTTGAGTaGAAACAATGCTTCAGAAGATTCAGCAACAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: YFTKVAKEDPFE*KQCFRRFSNKQ Trigger: TTGCTTGTTGCTGAATCTTCTGAAGCATTGTTTCAACTCAAAGGGATCCTCTTTGGCTACCTTTGTGAAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR GCA 90 bp | AATGACATCTACTTCACAAAGGTAGCCAAAGAGGATCCCTTTGAGTTGAAACAATCTGACACTAAACTCTaGTCAGTTTTATCTAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: NDIYFTKVAKEDPFELKQSDTKL*SVLSKR Trigger: CCGCTTAGATAAAACTGAGCAGAGTTTAGTGTCAGA...TTGTTTCAACTCAAAGGGATCCTCTTTGGCTACCTTTGTGAAGTAGATGTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CCA 90 bp | AATGACATCTACTTCACAAAGGTAGCCAAAGAGGATCCCTTTGAGTTGAAACAAAGTTTCTCAATCTCTTaGTTAAGGTCTTTCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NDIYFTKVAKEDPFELKQSFSIS*LRSFTL Trigger: CAAAGTGAAAGACCTTAACCAAGAGATTGAGAAACT...TTGTTTCAACTCAAAGGGATCCTCTTTGGCTACCTTTGTGAAGTAGATGTCATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS CCA 90 bp | TGGGGGCCCCACCTGGATGTTGCTGGTGGATGTATGCCTCTCCCTTaGGGCCTCGCTCGGGACGGCTCTAGGCCCACTGCTGTCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: WGPHLDVAGGCMPLP*GLARDGSRPTAVRG Trigger: CCCTCTGACAGCAGTGGGCCTAGAGCCGTCCCGAGCGAGGCCCCAAGGGAGAGGCATACATCCACCAGCAACATCCAGGTGGGGCCCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS CCA 90 bp | TCTTCAGTACCCGCTGGCGCAGCACCTCGATCTCAGCCAGCGTGCTaGAGTCGCTGCCCTCTGCCTGGATCACCTTGTCCTGGAGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSVPAGAAPRSQPAC*SRCPLPGSPCPGGP Trigger: TGGACCTCCAGGACAAGGTGATCCAGGCAGAGGGCAGCGACTCCAGCACGCTGGCTGAGATCGAGGTGCTGCGCCAGCGGGTACTGAAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS GCA 90 bp | CAATCTTCAGTACCCGCTGGCGCAGCACCTCGATCTCAGCCAGCGTaGTGGAGTCGCTGCCCTCTGCCTGGATCACCTTGTCCTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: QSSVPAGAAPRSQPA*WSRCPLPGSPCPGG Trigger: ACCTCCAGGACAAGGTGATCCAGGCAGAGGGCAGCGACTCCAGCACGCTGGCTGAGATCGAGGTGCTGCGCCAGCGGGTACTGAAGATTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS CCA 90 bp | ATCCGGTCCCTGCGGGTGAGCACCTCTGATGCGGTGAGGCTACTTTaGGTCCTCCTCGGGGAGAGCTCAGGAGCATCCCCTGAATTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: IRSLRVSTSDAVRLL*VLLGESSGASPEFP Trigger: AGGAAATTCAGGGGATGCTCCTGAGCTCTCCCCGAGGAGGACCCAAAGTAGCCTCACCGCATCAGAGGTGCTCACCCGCAGGGACCGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS TCA 90 bp | GCTCCGATGGCCTTAGAGCAGCTAGACTCTACAGCCTGTGTTCCCTaGCTTGCATGGCCAGGCACCTGTCCTCTCTTCCCACAGTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: APMALEQLDSTACVP*LAWPGTCPLFPQCA Trigger: GGCACACTGTGGGAAGAGAGGACAGGTGCCTGGCCATGCAAGTCAGGGAACACAGGCTGTAGAGTCTAGCTGCTCTAAGGCCATCGGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS GCA 90 bp | TGCAGCCGCTCCTCAGTCCAAACTGGCTCAGGCTCTGGCAGTCCCTaGTTTCCAGGCAGTTCAGAATGCTCCAGCGGGTTGTGTATTCGC | + |
|
Preference number: 5 (lower is better) Translates to: CSRSSVQTGSGSGSP*FPGSSECSSGLCIR Trigger: GCGAATACACAACCCGCTGGAGCATTCTGAACTGCCTGGAAAGCAGGGACTGCCAGAGCCTGAGCCAGTTTGGACTGAGGAGCGGCTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000168936.2 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCTGTGCCCTGCTTTCCAGAGGCAGGTTCTGGCCTCTCTGGTCCCGTGCTTAGGGCTGAAGGGCCTTaGATTTTTCACCCCAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: VAVPCFPEAGSGLSGPVLRAEGP*IFHPST Trigger: TGTGCTGGGGTGAAAAATCAAAGGCCCTTCAGCCCT...AAGCACGGGACCAGAGAGGCCAGAACCTGCCTCTGGAAAGCAGGGCACAGCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS TCA 90 bp | CCTGTTCCGGAGCCTTTCCCGCTTATGCTGGGGAGACAGTTCCCGTaGTGTATGCTTGGACACAGAGGCCTCACTCCCATGGCCTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PVPEPFPLMLGRQFP*CMLGHRGLTPMAFE Trigger: CTCAAAGGCCATGGGAGTGAGGCCTCTGTGTCCAAGCATACATCACGGGAACTGTCTCCCCAGCATAAGCGGGAAAGGCTCCGGAACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS CCA 90 bp | CTGGTAACAAATGTGCTGTCCTCCCCTTCCTCCATGCTTGATGAGTaGTTGCAGGAGGCAGCAGTGATGGCACCTCCCATCCGGTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LVTNVLSSPSSMLDE*LQEAAVMAPPIRSL Trigger: CAGGGACCGGATGGGAGGTGCCATCACTGCTGCCTCCTGCAACCACTCATCAAGCATGGAGGAAGGGGAGGACAGCACATTTGTTACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCTGTGCCCTGCTTTCCAGAGGCAGGTTCTGGCCTCTCTGGTCCCGTGCTTGGGAATTCTATAGCATaGGAGGAAGGCCTGGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VAVPCFPEAGSGLSGPVLGNSIA*EEGLVG Trigger: ACCTACCAGGCCTTCCTCCAATGCTATAGAATTCCC...AAGCACGGGACCAGAGAGGCCAGAACCTGCCTCTGGAAAGCAGGGCACAGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS GCA 90 bp | CGGAGCCTTTCCCGCTTATGCTGGGGAGACAGTTCCCGTGATGTATaGTTGGACACAGAGGCCTCACTCCCATGGCCTTTGAGCTTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RSLSRLCWGDSSRDV*LDTEASLPWPLSLV Trigger: GACTAAGCTCAAAGGCCATGGGAGTGAGGCCTCTGTGTCCAAGCATACATCACGGGAACTGTCTCCCCAGCATAAGCGGGAAAGGCTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS CCA 90 bp | GACAGTTCCCGTGATGTATGCTTGGACACAGAGGCCTCACTCCCATaGCCTTTGAGCTTAGTCCTCTCGTGCCTGCCTCTGCCCAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: DSSRDVCLDTEASLP*PLSLVLSCLPLPKR Trigger: CCTTTTGGGCAGAGGCAGGCACGAGAGGACTAAGCTCAAAGGCCATGGGAGTGAGGCCTCTGTGTCCAAGCATACATCACGGGAACTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | CCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTGGCCCCACCTGGATGTaGCTGGTGGATGTATGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PFAGHFLKDRLCRVCLLSGPTWM*LVDVCL Trigger: GAGGCATACATCCACCAGCAACATCCAGGTGGGGCC...ACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | AGCTGGGAAGCAGCAGTGGCAGAACACCTGCCTTGCACACCAGGTCCTATGCTCGGGGAGCTGACATGGTaGCTAATTGCTGTGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SWEAAVAEHLPCTPGPMLGELTW*LIAVSS Trigger: AGAGCTCACAGCAATTAGCAACCATGTCAGCTCCCC...GAGCATAGGACCTGGTGTGCAAGGCAGGTGTTCTGCCACTGCTGCTTCCCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | TTTGCTTTCCCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTTGCGGTGAGGCTACTTaGGGTCCTCCTCGGGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: FAFPFAGHFLKDRLCRVCCGEAT*GPPRGE Trigger: CTCTCCCCGAGGAGGACCCAAAGTAGCCTCACCGCA...ACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGGGAAAGCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS GCA 90 bp | TCGTTACTGAGAGCAAACTCCCTGTTCCGGAGCCTTTCCCGCTTATaGTGGGGAGACAGTTCCCGTGATGTATGCTTGGACACAGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLLRANSLFRSLSRL*WGDSSRDVCLDTEA Trigger: GGCCTCTGTGTCCAAGCATACATCACGGGAACTGTCTCCCCAGCATAAGCGGGAAAGGCTCCGGAACAGGGAGTTTGCTCTCAGTAACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS GCA 90 bp | ACTGGCTCAGGCTCTGGCAGTCCCTGCTTTCCAGGCAGTTCAGAATaGTCCAGCGGGTTGTGTATTCGCCTGCTGGTAACAAATGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TGSGSGSPCFPGSSE*SSGLCIRLLVTNVL Trigger: CAGCACATTTGTTACCAGCAGGCGAATACACAACCCGCTGGAGCATTCTGAACTGCCTGGAAAGCAGGGACTGCCAGAGCCTGAGCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | ATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTGTGGCCCCACCTGGATGTaGCTGGTGGATGTATGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ICWALPKRQAVPGLSTQCGPTWM*LVDVCL Trigger: GAGGCATACATCCACCAGCAACATCCAGGTGGGGCC...ACACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | TGCCAGCAGCAGTGTTGGTGCCCAGGAAAAGAGATGTACCAGATCTGTCTGTTTTGCGGTGAGGCTACTTaGGGTCCTCCTCGGGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CQQQCWCPGKEMYQICLFCGEAT*GPPRGE Trigger: CTCTCCCCGAGGAGGACCCAAAGTAGCCTCACCGCA...AAACAGACAGATCTGGTACATCTCTTTTCCTGGGCACCAACACTGCTGCTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | TGTGCCGGGTCTGTCTACTCAGTGTGGGGATTTCCTAAGAGGAGAATGATGAAGTGCGGTGAGGCTACTTaGGGTCCTCCTCGGGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CAGSVYSVWGFPKRRMMKCGEAT*GPPRGE Trigger: CTCTCCCCGAGGAGGACCCAAAGTAGCCTCACCGCA...CTTCATCATTCTCCTCTTAGGAAATCCCCACACTGAGTAGACAGACCCGGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS GCA 90 bp | TCCCTGACTTGCATGGCCAGGCACCTGTCCTCTCTTCCCACAGTGTaGCTCAGAGGAGAGGTCAGAAGTCTTATCACCTTTCCCCACTAT | + |
|
Preference number: 5 (lower is better) Translates to: SLTCMARHLSSLPTV*LRGEVRSLITFPHY Trigger: ATAGTGGGGAAAGGTGATAAGACTTCTGACCTCTCCTCTGAGGCACACTGTGGGAAGAGAGGACAGGTGCCTGGCCATGCAAGTCAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS CCA 90 bp | TTACTGAGAGCAAACTCCCTGTTCCGGAGCCTTTCCCGCTTATGCTaGGGAGACAGTTCCCGTGATGTATGCTTGGACACAGAGGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLRANSLFRSLSRLC*GDSSRDVCLDTEAS Trigger: TGAGGCCTCTGTGTCCAAGCATACATCACGGGAACTGTCTCCCCAGCATAAGCGGGAAAGGCTCCGGAACAGGGAGTTTGCTCTCAGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGAAAGGTGATGCCAGCAGCAGTGTTGGTGCCCAGGAAAAGAGATGTACCACCCCTTCCTCCATGCTaGATGAGTGGTTGCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RGKVMPAAVLVPRKRDVPPLPPC*MSGCRR Trigger: CCTCCTGCAACCACTCATCAAGCATGGAGGAAGGGG...TGGTACATCTCTTTTCCTGGGCACCAACACTGCTGCTGGCATCACCTTTCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGGAAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTCCCCTTCCTCCATGCTaGATGAGTGGTTGCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGKQSVHAFHGAIACGVTPLPPC*MSGCRR Trigger: CCTCCTGCAACCACTCATCAAGCATGGAGGAAGGGG...AGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTTCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS TCA 90 bp | TCTCTTACTCTTCCAGGCATTCCGCACTGTGATGTGTCTGCTGTCTaGAGAGGCACTATGGCTTTTCCACCTGATTGTCTCGGCTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLTLPGIPHCDVSAV*RGTMAFPPDCLGWG Trigger: CCCCCAGCCGAGACAATCAGGTGGAAAAGCCATAGTGCCTCTTCAGACAGCAGACACATCACAGTGCGGAATGCCTGGAAGAGTAAGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS GCA 90 bp | GACACAGAGGCCTCACTCCCATGGCCTTTGAGCTTAGTCCTCTCGTaGCTGCCTCTGCCCAAAAGGAAAGCATCTTCACCTTCTATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: DTEASLPWPLSLVLS*LPLPKRKASSPSMS Trigger: AGACATAGAAGGTGAAGATGCTTTCCTTTTGGGCAGAGGCAGGCACGAGAGGACTAAGCTCAAAGGCCATGGGAGTGAGGCCTCTGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS CCA 90 bp | CTGAATTTCCTACTCTTCGAGCGCCCTGTTCAGATGGCTGTGACCTaGGCTGCTCAAGTTCTAAGAAGTCTGTGCAGGGCCTCTGCGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LNFLLFERPVQMAVT*AAQVLRSLCRASAY Trigger: ATACGCAGAGGCCCTGCACAGACTTCTTAGAACTTGAGCAGCCCAGGTCACAGCCATCTGAACAGGGCGCTCGAAGAGTAGGAAATTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | CCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTAGGGCTGAAGGGCCTTaGATTTTTCACCCCAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PFAGHFLKDRLCRVCLLSRAEGP*IFHPST Trigger: TGTGCTGGGGTGAAAAATCAAAGGCCCTTCAGCCCT...ACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTAGAGGAGGCCCCACCTGGATGTaGCTGGTGGATGTATGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: KQSVHAFHGAIACGVTRGGPTWM*LVDVCL Trigger: GAGGCATACATCCACCAGCAACATCCAGGTGGGGCC...TCCTCTAGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTCAGAAGATTCAGCAACAAGCAAACAGTTCTTAACTCCCCGTGTGGTCAGTGCGGTGAGGCTACTTaGGGTCCTCCTCGGGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CFRRFSNKQTVLNSPCGQCGEAT*GPPRGE Trigger: CTCTCCCCGAGGAGGACCCAAAGTAGCCTCACCGCA...CTGACCACACGGGGAGTTAAGAACTGTTTGCTTGTTGCTGAATCTTCTGAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | TGCCAGCAGCAGTGTTGGTGCCCAGGAAAAGAGATGTACCAGATCTGTCTGTTTTCCCGTGATGTATGCTaGGACACAGAGGCCTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: CQQQCWCPGKEMYQICLFSRDVC*DTEASL Trigger: GAGTGAGGCCTCTGTGTCCAAGCATACATCACGGGA...AAACAGACAGATCTGGTACATCTCTTTTCCTGGGCACCAACACTGCTGCTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | GTGTGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCCTCTCAGTGCCTGGCTaGGGAGCTCCTTTCCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: VWGFPKRRMMKSAEVSSPLSVPG*GAPFQT Trigger: AGTTTGGAAAGGAGCTCCCAAGCCAGGCACTGAGAG...GGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | TTTGCTTTCCCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTAGGGCTGAAGGGCCTTaGATTTTTCACCCCAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: FAFPFAGHFLKDRLCRVCRAEGP*IFHPST Trigger: TGTGCTGGGGTGAAAAATCAAAGGCCCTTCAGCCCT...ACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGGGAAAGCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | GGAGCAAAGGGAGGGAAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGGGAGCTGACATGGTaGCTAATTGCTGTGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GAKGGKQSVHAFHGAIACGELTW*LIAVSS Trigger: AGAGCTCACAGCAATTAGCAACCATGTCAGCTCCCC...ACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTTCCCTCCCTTTGCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | TTTGCTTTCCCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTATGCTTGATGAGTGGTaGCAGGAGGCAGCAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: FAFPFAGHFLKDRLCRVCMLDEW*QEAAVM Trigger: CATCACTGCTGCCTCCTGCAACCACTCATCAAGCAT...ACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGGGAAAGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGAAAGGTGATGCCAGCAGCAGTGTTGGTGCCCAGGAAAAGAGATGTACCAATGCTTGATGAGTGGTaGCAGGAGGCAGCAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: RGKVMPAAVLVPRKRDVPMLDEW*QEAAVM Trigger: CATCACTGCTGCCTCCTGCAACCACTCATCAAGCAT...TGGTACATCTCTTTTCCTGGGCACCAACACTGCTGCTGGCATCACCTTTCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTAGAGGACCCCTTCCTCCATGCTaGATGAGTGGTTGCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KQSVHAFHGAIACGVTRGPLPPC*MSGCRR Trigger: CCTCCTGCAACCACTCATCAAGCATGGAGGAAGGGG...TCCTCTAGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS TCA 90 bp | CTGGAGAAGAAGCCTGTTTGCTGCTTAGAGAATAGTGTTCGTTACTaGGAGCAAACTCCCTGTTCCGGAGCCTTTCCCGCTTATGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LEKKPVCCLENSVRY*EQTPCSGAFPAYAG Trigger: CCCAGCATAAGCGGGAAAGGCTCCGGAACAGGGAGTTTGCTCTCAGTAACGAACACTATTCTCTAAGCAGCAAACAGGCTTCTTCTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | GCCTTAAGAGGTCATCCACTCTATAGAACTCATTCTGAGCTGGGAAGCAGCAGTTCCCGTGATGTATGCTaGGACACAGAGGCCTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: ALRGHPLYRTHSELGSSSSRDVC*DTEASL Trigger: GAGTGAGGCCTCTGTGTCCAAGCATACATCACGGGA...ACTGCTGCTTCCCAGCTCAGAATGAGTTCTATAGAGTGGATGACCTCTTAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTAGAGGATCCCGTGATGTATGCTaGGACACAGAGGCCTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: KQSVHAFHGAIACGVTRGSRDVC*DTEASL Trigger: GAGTGAGGCCTCTGTGTCCAAGCATACATCACGGGA...TCCTCTAGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTAGAGGACTCTCAGTGCCTGGCTaGGGAGCTCCTTTCCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: KQSVHAFHGAIACGVTRGLSVPG*GAPFQT Trigger: AGTTTGGAAAGGAGCTCCCAAGCCAGGCACTGAGAG...TCCTCTAGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGAAAGGTGATGCCAGCAGCAGTGTTGGTGCCCAGGAAAAGAGATGTACCAGGGAATTCTATAGCATaGGAGGAAGGCCTGGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RGKVMPAAVLVPRKRDVPGNSIA*EEGLVG Trigger: ACCTACCAGGCCTTCCTCCAATGCTATAGAATTCCC...TGGTACATCTCTTTTCCTGGGCACCAACACTGCTGCTGGCATCACCTTTCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | TGCCAGCAGCAGTGTTGGTGCCCAGGAAAAGAGATGTACCAGATCTGTCTGTTTATGCTTGATGAGTGGTaGCAGGAGGCAGCAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: CQQQCWCPGKEMYQICLFMLDEW*QEAAVM Trigger: CATCACTGCTGCCTCCTGCAACCACTCATCAAGCAT...AAACAGACAGATCTGGTACATCTCTTTTCCTGGGCACCAACACTGCTGCTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS TCA 90 bp | ATAATTGCTCTAGACCGCAGGGCCTCTCTAGGGCTGAAGGGCCTTTaGTTTTTCACCCCAGCACAGTTGGCATCTGGGAATTCTATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: IIALDRRASLGLKGL*FFTPAQLASGNSIA Trigger: TGCTATAGAATTCCCAGATGCCAACTGTGCTGGGGTGAAAAATCAAAGGCCCTTCAGCCCTAGAGAGGCCCTGCGGTCTAGAGCAATTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS CCA 90 bp | AGGGCTGAAGGGCCTTTGATTTTTCACCCCAGCACAGTTGGCATCTaGGAATTCTATAGCATTGGAGGAAGGCCTGGTAGGTTTCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: RAEGPLIFHPSTVGI*EFYSIGGRPGRFHR Trigger: TCTGTGAAACCTACCAGGCCTTCCTCCAATGCTATAGAATTCCCAGATGCCAACTGTGCTGGGGTGAAAAATCAAAGGCCCTTCAGCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGAGAGTGGCAGGGGGCACTGCAAGTGAGAGGTTGCAGCCTTGAATTAAGGAGATTTCTCTCTTCATaGAGGCTCAAACAAAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TGEWQGALQVRGCSLELRRFLSS*RLKQSW Trigger: CCAGCTTTGTTTGAGCCTCAATGAAGAGAGAAATCT...CCTTAATTCAAGGCTGCAACCTCTCACTTGCAGTGCCCCCTGCCACTCTCCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTCAGAAGATTCAGCAACAAGCAAACAGTTCTTAACTCCCCGTGTGGTCAGCTCTCAGTGCCTGGCTaGGGAGCTCCTTTCCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: CFRRFSNKQTVLNSPCGQLSVPG*GAPFQT Trigger: AGTTTGGAAAGGAGCTCCCAAGCCAGGCACTGAGAG...CTGACCACACGGGGAGTTAAGAACTGTTTGCTTGTTGCTGAATCTTCTGAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | GTAGCTTCCCATTTGGGAGTCAAAGAATGGTCCATGCTACCTTGGGGACAGAGAGGGAATTCTATAGCATaGGAGGAAGGCCTGGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VASHLGVKEWSMLPWGQRGNSIA*EEGLVG Trigger: ACCTACCAGGCCTTCCTCCAATGCTATAGAATTCCC...TCTCTGTCCCCAAGGTAGCATGGACCATTCTTTGACTCCCAAATGGGAAGCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGAGAGTGGCAGGGGGCACTGCAAGTGAGAGGTTGCAGCCTTGAATTAAGGATGCTGCTTGTCACTTaGCTTGTCACAGATTTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TGEWQGALQVRGCSLELRMLLVT*LVTDLE Trigger: CTCTAAATCTGTGACAAGCAAAGTGACAAGCAGCAT...CCTTAATTCAAGGCTGCAACCTCTCACTTGCAGTGCCCCCTGCCACTCTCCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | AAGAGCCACAGACTTAATTTCCTATACTCTTCAGTGGACCACCACAGGGGTCTGATGCTTGATGAGTGGTaGCAGGAGGCAGCAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: KSHRLNFLYSSVDHHRGLMLDEW*QEAAVM Trigger: CATCACTGCTGCCTCCTGCAACCACTCATCAAGCAT...CAGACCCCTGTGGTGGTCCACTGAAGAGTATAGGAAATTAAGTCTGTGGCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS TCA 90 bp | CACCAACTTGGCAGTAACAAAAGACTCTATGTCCAGGTCATCATCTaGGTCTGGCTTCTCTCTGCCACTGGATTTGATGACACGGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: HQLGSNKRLYVQVII*VWLLSATGFDDTAP Trigger: AGGTGCCGTGTCATCAAATCCAGTGGCAGAGAGAAGCCAGACTCAGATGATGACCTGGACATAGAGTCTTTTGTTACTGCCAAGTTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS TCA 90 bp | GAGGCACTATGGCTTTTCCACCTGATTGTCTCGGCTGGGGGCACATaGCTATTCTTCTCCACAGACTCTGATGGCTTGATTAGAATGCTA | + |
|
Preference number: 5 (lower is better) Translates to: EALWLFHLIVSAGGT*LFFSTDSDGLIRML Trigger: TAGCATTCTAATCAAGCCATCAGAGTCTGTGGAGAAGAATAGTCATGTGCCCCCAGCCGAGACAATCAGGTGGAAAAGCCATAGTGCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | CCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTCTACTCAGTAGATTTCTCTCTTCATaGAGGCTCAAACAAAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PFAGHFLKDRLCRVCLLSRFLSS*RLKQSW Trigger: CCAGCTTTGTTTGAGCCTCAATGAAGAGAGAAATCT...ACTGAGTAGACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | TGTGCCGGGTCTGTCTACTCAGTGTGGGGATTTCCTAAGAGGAGAATGATGAAGGACTGCCCTTCCTTTTaGACTCTTTGGATGACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: CAGSVYSVWGFPKRRMMKDCPSF*TLWMTV Trigger: CACTGTCATCCAAAGAGTCAAAAAGGAAGGGCAGTC...CTTCATCATTCTCCTCTTAGGAAATCCCCACACTGAGTAGACAGACCCGGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCCAGGACTGCCCTTCCTTTTaGACTCTTTGGATGACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: WGFPKRRMMKSAEVSSPQDCPSF*TLWMTV Trigger: CACTGTCATCCAAAGAGTCAAAAAGGAAGGGCAGTC...CTGGGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | AGCAAAAGGGACTGGGCTTTGATATACAAACTGCTTACCATGGAGCAGAGGAGAGTACCCATTCCCATGTaGGAGGCTTTTGCTGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SKRDWALIYKLLTMEQRRVPIPM*EAFAAL Trigger: AAGGGCAGCAAAAGCCTCCAACATGGGAATGGGTAC...TCTCCTCTGCTCCATGGTAAGCAGTTTGTATATCAAAGCCCAGTCCCTTTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | GCCCCTCTGTTTTTATCAGCAGAGAAGAGCCACAGACTTAATTTCCTATACTCTCCCCTTCCTCCATGCTaGATGAGTGGTTGCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: APLFLSAEKSHRLNFLYSPLPPC*MSGCRR Trigger: CCTCCTGCAACCACTCATCAAGCATGGAGGAAGGGG...AGAGTATAGGAAATTAAGTCTGTGGCTCTTCTCTGCTGATAAAAACAGAGGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS TCA 90 bp | TTGGCAGTCTTTTTACCCTTAGAAAGTCCTTCTGAGGAGGCTTTTTaGGATGAGGAGAGAGCTCCGATGGCCTTAGAGCAGCTAGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: LAVFLPLESPSEEAF*DEERAPMALEQLDS Trigger: AGAGTCTAGCTGCTCTAAGGCCATCGGAGCTCTCTCCTCATCTCAAAAAGCCTCCTCAGAAGGACTTTCTAAGGGTAAAAAGACTGCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | GCCTTAAGAGGTCATCCACTCTATAGAACTCATTCTGAGCTGGGAAGCAGCAGTGACTGCCCTTCCTTTTaGACTCTTTGGATGACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ALRGHPLYRTHSELGSSSDCPSF*TLWMTV Trigger: CACTGTCATCCAAAGAGTCAAAAAGGAAGGGCAGTC...ACTGCTGCTTCCCAGCTCAGAATGAGTTCTATAGAGTGGATGACCTCTTAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | GTCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCGTACCCATTCCCATGTaGGAGGCTTTTGCTGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VIPFGSWLCLHETGYPKVVPIPM*EAFAAL Trigger: AAGGGCAGCAAAAGCCTCCAACATGGGAATGGGTAC...GACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTAAAAGGCTTAATGCACTTTGAACTGCATAAATCTGAGGCCCTCAACAGGCTCTCAGTGCCTGGCTaGGGAGCTCCTTTCCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: FLKGLMHFELHKSEALNRLSVPG*GAPFQT Trigger: AGTTTGGAAAGGAGCTCCCAAGCCAGGCACTGAGAG...CCTGTTGAGGGCCTCAGATTTATGCAGTTCAAAGTGCATTAAGCCTTTTAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGGAAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTTTAGAATTTGAAAAATaGGCATCAGCCGCTAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GGKQSVHAFHGAIACGVTLEFEK*ASAARP Trigger: TGGCCTAGCGGCTGATGCCAATTTTTCAAATTCTAA...AGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTTCCCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | AGCAAAAGGGACTGGGCTTTGATATACAAACTGCTTACCATGGAGCAGAGGAGAGGGAATTCTATAGCATaGGAGGAAGGCCTGGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SKRDWALIYKLLTMEQRRGNSIA*EEGLVG Trigger: ACCTACCAGGCCTTCCTCCAATGCTATAGAATTCCC...TCTCCTCTGCTCCATGGTAAGCAGTTTGTATATCAAAGCCCAGTCCCTTTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | GTCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCAGGGCTGAAGGGCCTTaGATTTTTCACCCCAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: VIPFGSWLCLHETGYPKVRAEGP*IFHPST Trigger: TGTGCTGGGGTGAAAAATCAAAGGCCCTTCAGCCCT...GACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | TTTGCTTTCCCATTTGCTGGGCACTTCCTAAAAGACAGGCTGTGCCGGGTCTGTATGCTGCTTGTCACTTaGCTTGTCACAGATTTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: FAFPFAGHFLKDRLCRVCMLLVT*LVTDLE Trigger: CTCTAAATCTGTGACAAGCAAAGTGACAAGCAGCAT...ACAGACCCGGCACAGCCTGTCTTTTAGGAAGTGCCCAGCAAATGGGAAAGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | CTTGGTGTTTTCAGAAGTGATATGTCTTTCGACCTTGAAATCAGAGTCAGTCTAGGCCCCACCTGGATGTaGCTGGTGGATGTATGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LGVFRSDMSFDLEIRVSLGPTWM*LVDVCL Trigger: GAGGCATACATCCACCAGCAACATCCAGGTGGGGCC...TAGACTGACTCTGATTTCAAGGTCGAAAGACATATCACTTCTGAAAACACCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS TCA 90 bp | CCCACTCTTTCAGCTTCTGTGAGCTGCAAGGTGATGTCATGTTTATaGATAGAGAGCTCAAGAGGGGAGCTGACATGGTTGCTAATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PTLSASVSCKVMSCL*IESSRGELTWLLIA Trigger: AGCAATTAGCAACCATGTCAGCTCCCCTCTTGAGCTCTCTATTCATAAACATGACATCACCTTGCAGCTCACAGAAGCTGAAAGAGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | GTGTGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCAGATTTCTCTCTTCATaGAGGCTCAAACAAAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VWGFPKRRMMKSAEVSSPRFLSS*RLKQSW Trigger: CCAGCTTTGTTTGAGCCTCAATGAAGAGAGAAATCT...GGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | TCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCAGTACCCATTCCCATGTaGGAGGCTTTTGCTGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SFHLVAGSVSMKLVIQKSVPIPM*EAFAAL Trigger: AAGGGCAGCAAAAGCCTCCAACATGGGAATGGGTAC...TGACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | GTGTGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCTTAGAATTTGAAAAATaGGCATCAGCCGCTAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VWGFPKRRMMKSAEVSSPLEFEK*ASAARP Trigger: TGGCCTAGCGGCTGATGCCAATTTTTCAAATTCTAA...GGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGAAAGGTGATGCCAGCAGCAGTGTTGGTGCCCAGGAAAAGAGATGTACCACAACTCCTTCTTTATTaGGCAATGAAAAGCCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: RGKVMPAAVLVPRKRDVPQLLLY*AMKSPE Trigger: TTCAGGGCTTTTCATTGCCAAATAAAGAAGGAGTTG...TGGTACATCTCTTTTCCTGGGCACCAACACTGCTGCTGGCATCACCTTTCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGGAAGCAGTCTGTCCATGCCTTTCATGGAGCTATTGCTTGTGGAGTGACTCAACTCCTTCTTTATTaGGCAATGAAAAGCCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GGKQSVHAFHGAIACGVTQLLLY*AMKSPE Trigger: TTCAGGGCTTTTCATTGCCAAATAAAGAAGGAGTTG...AGTCACTCCACAAGCAATAGCTCCATGAAAGGCATGGACAGACTGCTTCCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR CAA 90 bp | GTGTGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCATGCTGCTTGTCACTTaGCTTGTCACAGATTTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VWGFPKRRMMKSAEVSSPMLLVT*LVTDLE Trigger: CTCTAAATCTGTGACAAGCAAAGTGACAAGCAGCAT...GGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR CAA 90 bp | TTCCTAAAAGGCTTAATGCACTTTGAACTGCATAAATCTGAGGCCCTCAACAGGGGGGAGCTGACATGGTaGCTAATTGCTGTGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FLKGLMHFELHKSEALNRGELTW*LIAVSS Trigger: AGAGCTCACAGCAATTAGCAACCATGTCAGCTCCCC...CCTGTTGAGGGCCTCAGATTTATGCAGTTCAAAGTGCATTAAGCCTTTTAGGAA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR CAA 90 bp | TCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCAGGGGAGCTGACATGGTaGCTAATTGCTGTGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SFHLVAGSVSMKLVIQKSGELTW*LIAVSS Trigger: AGAGCTCACAGCAATTAGCAACCATGTCAGCTCCCC...TGACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR CAA 90 bp | AAGAGCCACAGACTTAATTTCCTATACTCTTCAGTGGACCACCACAGGGGTCTGAGATTTCTCTCTTCATaGAGGCTCAAACAAAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KSHRLNFLYSSVDHHRGLRFLSS*RLKQSW Trigger: CCAGCTTTGTTTGAGCCTCAATGAAGAGAGAAATCT...CAGACCCCTGTGGTGGTCCACTGAAGAGTATAGGAAATTAAGTCTGTGGCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR CAA 90 bp | TGGGGATTTCCTAAGAGGAGAATGATGAAGTCAGCTGAAGTTTCCAGCCCCCAGTTCCTTTTTGACTCTTaGGATGACAGTGTAGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: WGFPKRRMMKSAEVSSPQFLFDS*DDSVEE Trigger: TTCCTCTACACTGTCATCCAAAGAGTCAAAAAGGAA...CTGGGGGCTGGAAACTTCAGCTGACTTCATCATTCTCCTCTTAGGAAATCCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR CAA 90 bp | CTTGGTGTTTTCAGAAGTGATATGTCTTTCGACCTTGAAATCAGAGTCAGTCTATCCCGTGATGTATGCTaGGACACAGAGGCCTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: LGVFRSDMSFDLEIRVSLSRDVC*DTEASL Trigger: GAGTGAGGCCTCTGTGTCCAAGCATACATCACGGGA...TAGACTGACTCTGATTTCAAGGTCGAAAGACATATCACTTCTGAAAACACCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR CAA 90 bp | AAGAGCCACAGACTTAATTTCCTATACTCTTCAGTGGACCACCACAGGGGTCTGTTAGAATTTGAAAAATaGGCATCAGCCGCTAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KSHRLNFLYSSVDHHRGLLEFEK*ASAARP Trigger: TGGCCTAGCGGCTGATGCCAATTTTTCAAATTCTAA...CAGACCCCTGTGGTGGTCCACTGAAGAGTATAGGAAATTAAGTCTGTGGCTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | TGTGCCGGGTCTGTCTACTCAGTGTGGGGATTTCCTAAGAGGAGAATGATGAAGCAACTCCTTCTTTATTaGGCAATGAAAAGCCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: CAGSVYSVWGFPKRRMMKQLLLY*AMKSPE Trigger: TTCAGGGCTTTTCATTGCCAAATAAAGAAGGAGTTG...CTTCATCATTCTCCTCTTAGGAAATCCCCACACTGAGTAGACAGACCCGGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS TCA 90 bp | CTGTACCCATTCCCATGTTGGAGGCTTTTGCTGCCCTTTTGTTTGTaGAAACTGGAGAAGAAGCCTGTTTGCTGCTTAGAGAATAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LYPFPCWRLLLPFCL*KLEKKPVCCLENSV Trigger: AACACTATTCTCTAAGCAGCAAACAGGCTTCTTCTCCAGTTTTCACAAACAAAAGGGCAGCAAAAGCCTCCAACATGGGAATGGGTACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS TCA 90 bp | CTGCTCAAAGCCTCCTCTAGCTTCTCTAAATCAACCATTCGTTTCTaGAGCCGCTCAATTTCAGATTTTAGCTCTCGCGTAAGGTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLKASSSFSKSTIRF*SRSISDFSSRVRFS Trigger: AGAAAACCTTACGCGAGAGCTAAAATCTGAAATTGAGCGGCTTCAGAAACGAATGGTTGATTTAGAGAAGCTAGAGGAGGCTTTGAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS CCA 90 bp | ATTTTCTTGGTCAGATTTCTCTCTTCATTGAGGCTCAAACAAAGCTaGGAACATTCATTCTTACTCCTGCTCAAAGCCTCCTCTAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IFLVRFLSSLRLKQS*EHSFLLLLKASSSF Trigger: GAAGCTAGAGGAGGCTTTGAGCAGGAGTAAGAATGAATGTTCCCAGCTTTGTTTGAGCCTCAATGAAGAGAGAAATCTGACCAAGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
||
| CDS-3UTR CAA 90 bp | AATGACATCTACTTCACAAAGGTAGCCAAAGAGGATCCCTTTGAGTTGAAACAAGACTGCCCTTCCTTTTaGACTCTTTGGATGACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: NDIYFTKVAKEDPFELKQDCPSF*TLWMTV Trigger: CACTGTCATCCAAAGAGTCAAAAAGGAAGGGCAGTC...TTGTTTCAACTCAAAGGGATCCTCTTTGGCTACCTTTGTGAAGTAGATGTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR CAA 90 bp | TCATTCCATTTGGTAGCTGGCTCTGTCTCCATGAAACTGGTTATCCAAAAGTCACAACTCCTTCTTTATTaGGCAATGAAAAGCCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SFHLVAGSVSMKLVIQKSQLLLY*AMKSPE Trigger: TTCAGGGCTTTTCATTGCCAAATAAAGAAGGAGTTG...TGACTTTTGGATAACCAGTTTCATGGAGACAGAGCCAGCTACCAAATGGAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS TCA 90 bp | TCTCGCGTAAGGTTTTCTTCCTCTTCAAGTTTCTCCTTCATCGTATaGCATAGATCCTCTGCTCTCTTAATTTCCTCATCTTTACCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SRVRFSSSSSFSFIV*HRSSALLISSSLPS Trigger: TGAAGGTAAAGATGAGGAAATTAAGAGAGCAGAGGATCTATGTCATACGATGAAGGAGAAACTTGAAGAGGAAGAAAACCTTACGCGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS-3UTR CAA 90 bp | AATGACATCTACTTCACAAAGGTAGCCAAAGAGGATCCCTTTGAGTTGAAACAATTAGAATTTGAAAAATaGGCATCAGCCGCTAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NDIYFTKVAKEDPFELKQLEFEK*ASAARP Trigger: TGGCCTAGCGGCTGATGCCAATTTTTCAAATTCTAA...TTGTTTCAACTCAAAGGGATCCTCTTTGGCTACCTTTGTGAAGTAGATGTCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001116.5 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS TCA 90 bp | AGTTTCTCAATCTCTTGGTTAAGGTCTTTCACTTTGTTGTCTTCCTaGTTCCGGTTCTTTTCATTTTCTGATTTGTCTCTGGTTTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: SFSISWLRSFTLLSS*FRFFSFSDLSLVSF Trigger: GAATGAAACCAGAGACAAATCAGAAAATGAAAAGAACCGGAATCAGGAAGACAACAAAGTGAAAGACCTTAACCAAGAGATTGAGAAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CCA 72 bp | CCCGCTGGCGCAGCACCTCGATCTCAGCCAGCGTGCTaGAGTCGCTGCCCTCTGCCTGGATCACCTTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PAGAAPRSQPAC*SRCPLPGSPCP Trigger: AGGACAAGGTGATCCAGGCAGAGGGCAGCGACTCCAGCACGCTGGCTGAGATCGAGGTGCTGCGCCAGCGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS GCA 72 bp | GTACCCGCTGGCGCAGCACCTCGATCTCAGCCAGCGTaGTGGAGTCGCTGCCCTCTGCCTGGATCACCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: VPAGAAPRSQPA*WSRCPLPGSPC Trigger: ACAAGGTGATCCAGGCAGAGGGCAGCGACTCCAGCACGCTGGCTGAGATCGAGGTGCTGCGCCAGCGGGTAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CCA 72 bp | CACCTGGATGTTGCTGGTGGATGTATGCCTCTCCCTTaGGGCCTCGCTCGGGACGGCTCTAGGCCCACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: HLDVAGGCMPLP*GLARDGSRPTA Trigger: AGCAGTGGGCCTAGAGCCGTCCCGAGCGAGGCCCCAAGGGAGAGGCATACATCCACCAGCAACATCCAGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CCA 72 bp | CTGCGGGTGAGCACCTCTGATGCGGTGAGGCTACTTTaGGTCCTCCTCGGGGAGAGCTCAGGAGCATCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LRVSTSDAVRLL*VLLGESSGASP Trigger: AGGGGATGCTCCTGAGCTCTCCCCGAGGAGGACCCAAAGTAGCCTCACCGCATCAGAGGTGCTCACCCGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CAA 72 bp | AGCGTGCTGGAGTCGCTGCCCTCTGCCTGGATCACCTaGTCCTGGAGGTCCAGGAGCTCATCCTCCGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SVLESLPSAWIT*SWRSRSSSSAL Trigger: GAGAGCGGAGGATGAGCTCCTGGACCTCCAGGACAAGGTGATCCAGGCAGAGGGCAGCGACTCCAGCACGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000129230.3 ENSMUST00000170102.8 |
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| CDS CCA 72 bp | AGGCTTTGCTGGGTGCAGCCGCTCCTCAGTCCAAACTaGCTCAGGCTCTGGCAGTCCCTGCTTTCCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RLCWVQPLLSPN*LRLWQSLLSRQ Trigger: CTGCCTGGAAAGCAGGGACTGCCAGAGCCTGAGCCAGTTTGGACTGAGGAGCGGCTGCACCCAGCAAAGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000168936.2 ENSMUST00000170102.8 |
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| CDS CAA 72 bp | GTGCTGTCCTCCCCTTCCTCCATGCTTGATGAGTGGTaGCAGGAGGCAGCAGTGATGGCACCTCCCATCCGG | + |
|
Preference number: 6 (lower is better) Translates to: VLSSPSSMLDEW*QEAAVMAPPIR Trigger: CCGGATGGGAGGTGCCATCACTGCTGCCTCCTGCAACCACTCATCAAGCATGGAGGAAGGGGAGGACAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CCA 72 bp | TGGTTGCTAATTGCTGTGAGCTCTGGGGGCCCCACCTaGATGTTGCTGGTGGATGTATGCCTCTCCCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: WLLIAVSSGGPT*MLLVDVCLSLG Trigger: CCCAAGGGAGAGGCATACATCCACCAGCAACATCCAGGTGGGGCCCCCAGAGCTCACAGCAATTAGCAACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS TCA 72 bp | GAGCCTTTCCCGCTTATGCTGGGGAGACAGTTCCCGTaGTGTATGCTTGGACACAGAGGCCTCACTCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: EPFPLMLGRQFP*CMLGHRGLTPM Trigger: CATGGGAGTGAGGCCTCTGTGTCCAAGCATACATCACGGGAACTGTCTCCCCAGCATAAGCGGGAAAGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS TCA 72 bp | GCCTTAGAGCAGCTAGACTCTACAGCCTGTGTTCCCTaGCTTGCATGGCCAGGCACCTGTCCTCTCTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: ALEQLDSTACVP*LAWPGTCPLFP Trigger: TGGGAAGAGAGGACAGGTGCCTGGCCATGCAAGTCAGGGAACACAGGCTGTAGAGTCTAGCTGCTCTAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS GCA 72 bp | TCCCGCTTATGCTGGGGAGACAGTTCCCGTGATGTATaGTTGGACACAGAGGCCTCACTCCCATGGCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SRLCWGDSSRDV*LDTEASLPWPL Trigger: CAAAGGCCATGGGAGTGAGGCCTCTGTGTCCAAGCATACATCACGGGAACTGTCTCCCCAGCATAAGCGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS GCA 72 bp | GGCTCTGGCAGTCCCTGCTTTCCAGGCAGTTCAGAATaGTCCAGCGGGTTGTGTATTCGCCTGCTGGTAACA | + |
|
Preference number: 6 (lower is better) Translates to: GSGSPCFPGSSE*SSGLCIRLLVT Trigger: TGTTACCAGCAGGCGAATACACAACCCGCTGGAGCATTCTGAACTGCCTGGAAAGCAGGGACTGCCAGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CCA 72 bp | CGTGATGTATGCTTGGACACAGAGGCCTCACTCCCATaGCCTTTGAGCTTAGTCCTCTCGTGCCTGCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RDVCLDTEASLP*PLSLVLSCLPL Trigger: CAGAGGCAGGCACGAGAGGACTAAGCTCAAAGGCCATGGGAGTGAGGCCTCTGTGTCCAAGCATACATCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CCA 72 bp | CTACTCTTCGAGCGCCCTGTTCAGATGGCTGTGACCTaGGCTGCTCAAGTTCTAAGAAGTCTGTGCAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LLFERPVQMAVT*AAQVLRSLCRA Trigger: GGCCCTGCACAGACTTCTTAGAACTTGAGCAGCCCAGGTCACAGCCATCTGAACAGGGCGCTCGAAGAGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CAA 72 bp | GTATGCTTGGACACAGAGGCCTCACTCCCATGGCCTTaGAGCTTAGTCCTCTCGTGCCTGCCTCTGCCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: VCLDTEASLPWP*SLVLSCLPLPK Trigger: TTTGGGCAGAGGCAGGCACGAGAGGACTAAGCTCAAAGGCCATGGGAGTGAGGCCTCTGTGTCCAAGCATAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CAA 72 bp | CGCTTATGCTGGGGAGACAGTTCCCGTGATGTATGCTaGGACACAGAGGCCTCACTCCCATGGCCTTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RLCWGDSSRDVC*DTEASLPWPLS Trigger: GCTCAAAGGCCATGGGAGTGAGGCCTCTGTGTCCAAGCATACATCACGGGAACTGTCTCCCCAGCATAAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CAA 90 bp | TCCCGTGATGTATGCTTGGACACAGAGGCCTCACTCCCATGGCCTTaGAGCTTAGTCCTCTCGTGCCTGCCTCTGCCCAAAAGGAAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SRDVCLDTEASLPWP*SLVLSCLPLPKRKA Trigger: TGCTTTCCTTTTGGGCAGAGGCAGGCACGAGAGGACTAAGCTCAAAGGCCATGGGAGTGAGGCCTCTGTGTCCAAGCATACATCACGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CAA 90 bp | AGCCTTTCCCGCTTATGCTGGGGAGACAGTTCCCGTGATGTATGCTaGGACACAGAGGCCTCACTCCCATGGCCTTTGAGCTTAGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SLSRLCWGDSSRDVC*DTEASLPWPLSLVL Trigger: GAGGACTAAGCTCAAAGGCCATGGGAGTGAGGCCTCTGTGTCCAAGCATACATCACGGGAACTGTCTCCCCAGCATAAGCGGGAAAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CAA 90 bp | TCTGGCAGTCCCTGCTTTCCAGGCAGTTCAGAATGCTCCAGCGGGTaGTGTATTCGCCTGCTGGTAACAAATGTGCTGTCCTCCCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SGSPCFPGSSECSSG*CIRLLVTNVLSSPS Trigger: GGAAGGGGAGGACAGCACATTTGTTACCAGCAGGCGAATACACAACCCGCTGGAGCATTCTGAACTGCCTGGAAAGCAGGGACTGCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS TCA 72 bp | CTAGACCGCAGGGCCTCTCTAGGGCTGAAGGGCCTTTaGTTTTTCACCCCAGCACAGTTGGCATCTGGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: LDRRASLGLKGL*FFTPAQLASGN Trigger: ATTCCCAGATGCCAACTGTGCTGGGGTGAAAAATCAAAGGCCCTTCAGCCCTAGAGAGGCCCTGCGGTCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS GCA 72 bp | GCCTCACTCCCATGGCCTTTGAGCTTAGTCCTCTCGTaGCTGCCTCTGCCCAAAAGGAAAGCATCTTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: ASLPWPLSLVLS*LPLPKRKASSP Trigger: AGGTGAAGATGCTTTCCTTTTGGGCAGAGGCAGGCACGAGAGGACTAAGCTCAAAGGCCATGGGAGTGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS GCA 72 bp | AGAGCAAACTCCCTGTTCCGGAGCCTTTCCCGCTTATaGTGGGGAGACAGTTCCCGTGATGTATGCTTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: RANSLFRSLSRL*WGDSSRDVCLD Trigger: GTCCAAGCATACATCACGGGAACTGTCTCCCCAGCATAAGCGGGAAAGGCTCCGGAACAGGGAGTTTGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CCA 72 bp | GCAAACTCCCTGTTCCGGAGCCTTTCCCGCTTATGCTaGGGAGACAGTTCCCGTGATGTATGCTTGGACACA | + |
|
Preference number: 6 (lower is better) Translates to: ANSLFRSLSRLC*GDSSRDVCLDT Trigger: TGTGTCCAAGCATACATCACGGGAACTGTCTCCCCAGCATAAGCGGGAAAGGCTCCGGAACAGGGAGTTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CCA 72 bp | CGCACTGTGATGTGTCTGCTGTCTGAAGAGGCACTATaGCTTTTCCACCTGATTGTCTCGGCTGGGGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: RTVMCLLSEEAL*LFHLIVSAGGT Trigger: TGTGCCCCCAGCCGAGACAATCAGGTGGAAAAGCCATAGTGCCTCTTCAGACAGCAGACACATCACAGTGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CAA 72 bp | TCTAGACCGCAGGGCCTCTCTAGGGCTGAAGGGCCTTaGATTTTTCACCCCAGCACAGTTGGCATCTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SRPQGLSRAEGP*IFHPSTVGIWE Trigger: TTCCCAGATGCCAACTGTGCTGGGGTGAAAAATCAAAGGCCCTTCAGCCCTAGAGAGGCCCTGCGGTCTAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS GCA 72 bp | TGCATGGCCAGGCACCTGTCCTCTCTTCCCACAGTGTaGCTCAGAGGAGAGGTCAGAAGTCTTATCACCTTT | + |
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Preference number: 6 (lower is better) Translates to: CMARHLSSLPTV*LRGEVRSLITF Trigger: AAAGGTGATAAGACTTCTGACCTCTCCTCTGAGGCACACTGTGGGAAGAGAGGACAGGTGCCTGGCCATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CCA 72 bp | ATTTCCTCATCTTTACCTTCAATCTTCAGTACCCGCTaGCGCAGCACCTCGATCTCAGCCAGCGTGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: ISSSLPSIFSTR*RSTSISASVLE Trigger: CTCCAGCACGCTGGCTGAGATCGAGGTGCTGCGCCAGCGGGTACTGAAGATTGAAGGTAAAGATGAGGAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CAA 72 bp | CCCTGCTTTCCAGGCAGTTCAGAATGCTCCAGCGGGTaGTGTATTCGCCTGCTGGTAACAAATGTGCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: PCFPGSSECSSG*CIRLLVTNVLS Trigger: GGACAGCACATTTGTTACCAGCAGGCGAATACACAACCCGCTGGAGCATTCTGAACTGCCTGGAAAGCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CAA 90 bp | CTTCACTGTGAGAGGACCCAGGTGCAAATCGGTCTTCAGTTCTCTTaGTCTCCTGAGTCCCACTGTCTGTACCCATTCCCATGTTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: LHCERTQVQIGLQFS*SPESHCLYPFPCWR Trigger: CCTCCAACATGGGAATGGGTACAGACAGTGGGACTCAGGAGACAAAGAGAACTGAAGACCGATTTGCACCTGGGTCCTCTCACAGTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CAA 90 bp | GTTGTCTTCTCTACTTTTCCCTTAAGTCCACTCTCAGTGCCTGGCTaGGGAGCTCCTTTCCAAACTTTAGTGTGCTCCTGGGCAGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: VVFSTFPLSPLSVPG*GAPFQTLVCSWAAG Trigger: CCCTGCTGCCCAGGAGCACACTAAAGTTTGGAAAGGAGCTCCCAAGCCAGGCACTGAGAGTGGACTTAAGGGAAAAGTAGAGAAGACAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS TCA 72 bp | GTCTGCTGTCTGAAGAGGCACTATGGCTTTTCCACCTaGTTGTCTCGGCTGGGGGCACATGACTATTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: VCCLKRHYGFST*LSRLGAHDYSS Trigger: AGAAGAATAGTCATGTGCCCCCAGCCGAGACAATCAGGTGGAAAAGCCATAGTGCCTCTTCAGACAGCAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CCA 72 bp | GGGCCTTTGATTTTTCACCCCAGCACAGTTGGCATCTaGGAATTCTATAGCATTGGAGGAAGGCCTGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: GPLIFHPSTVGI*EFYSIGGRPGR Trigger: CCTACCAGGCCTTCCTCCAATGCTATAGAATTCCCAGATGCCAACTGTGCTGGGGTGAAAAATCAAAGGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CAA 90 bp | TATAATTGCTCTAGACCGCAGGGCCTCTCTAGGGCTGAAGGGCCTTaGATTTTTCACCCCAGCACAGTTGGCATCTGGGAATTCTATAGC | + |
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Preference number: 6 (lower is better) Translates to: YNCSRPQGLSRAEGP*IFHPSTVGIWEFYS Trigger: GCTATAGAATTCCCAGATGCCAACTGTGCTGGGGTGAAAAATCAAAGGCCCTTCAGCCCTAGAGAGGCCCTGCGGTCTAGAGCAATTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS TCA 72 bp | AAGCCTGTTTGCTGCTTAGAGAATAGTGTTCGTTACTaGGAGCAAACTCCCTGTTCCGGAGCCTTTCCCGCT | + |
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Preference number: 6 (lower is better) Translates to: KPVCCLENSVRY*EQTPCSGAFPA Trigger: AGCGGGAAAGGCTCCGGAACAGGGAGTTTGCTCTCAGTAACGAACACTATTCTCTAAGCAGCAAACAGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS TCA 72 bp | TGGCTTTTCCACCTGATTGTCTCGGCTGGGGGCACATaGCTATTCTTCTCCACAGACTCTGATGGCTTGATT | + |
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Preference number: 6 (lower is better) Translates to: WLFHLIVSAGGT*LFFSTDSDGLI Trigger: AATCAAGCCATCAGAGTCTGTGGAGAAGAATAGTCATGTGCCCCCAGCCGAGACAATCAGGTGGAAAAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CCA 72 bp | GCTACTCCTAGAGACCACCATCTCTGCTCTATTCTTTaGAGACCCATCTCCCACTCTTTCAGCTTCTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: ATPRDHHLCSIL*RPISHSFSFCE Trigger: CTCACAGAAGCTGAAAGAGTGGGAGATGGGTCTCCAAAGAATAGAGCAGAGATGGTGGTCTCTAGGAGTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CAA 72 bp | TCTACTTTTCCCTTAAGTCCACTCTCAGTGCCTGGCTaGGGAGCTCCTTTCCAAACTTTAGTGTGCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: STFPLSPLSVPG*GAPFQTLVCSW Trigger: CCAGGAGCACACTAAAGTTTGGAAAGGAGCTCCCAAGCCAGGCACTGAGAGTGGACTTAAGGGAAAAGTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CAA 72 bp | ACCCCAGCACAGTTGGCATCTGGGAATTCTATAGCATaGGAGGAAGGCCTGGTAGGTTTCACAGAGTCATTT | + |
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Preference number: 6 (lower is better) Translates to: TPAQLASGNSIA*EEGLVGFTESF Trigger: AAATGACTCTGTGAAACCTACCAGGCCTTCCTCCAATGCTATAGAATTCCCAGATGCCAACTGTGCTGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS TCA 72 bp | TTTTTACCCTTAGAAAGTCCTTCTGAGGAGGCTTTTTaGGATGAGGAGAGAGCTCCGATGGCCTTAGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: FLPLESPSEEAF*DEERAPMALEQ Trigger: CTGCTCTAAGGCCATCGGAGCTCTCTCCTCATCTCAAAAAGCCTCCTCAGAAGGACTTTCTAAGGGTAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS GCA 72 bp | TTTCACATCCTTATCAATGATAACGGGTTTTATAATTaGTCTAGACCGCAGGGCCTCTCTAGGGCTGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: FHILINDNGFYN*SRPQGLSRAEG Trigger: CCCTTCAGCCCTAGAGAGGCCCTGCGGTCTAGAGCAATTATAAAACCCGTTATCATTGATAAGGATGTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS TCA 72 bp | GCCTCCTCTAGCTTCTCTAAATCAACCATTCGTTTCTaGAGCCGCTCAATTTCAGATTTTAGCTCTCGCGTA | + |
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Preference number: 6 (lower is better) Translates to: ASSSFSKSTIRF*SRSISDFSSRV Trigger: TACGCGAGAGCTAAAATCTGAAATTGAGCGGCTTCAGAAACGAATGGTTGATTTAGAGAAGCTAGAGGAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS GCA 72 bp | GGCTCAAACAAAGCTGGGAACATTCATTCTTACTCCTaGTCAAAGCCTCCTCTAGCTTCTCTAAATCAACCA | + |
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Preference number: 6 (lower is better) Translates to: GSNKAGNIHSYS*SKPPLASLNQP Trigger: TGGTTGATTTAGAGAAGCTAGAGGAGGCTTTGAGCAGGAGTAAGAATGAATGTTCCCAGCTTTGTTTGAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CCA 72 bp | CGTCCTCTATCCGTAGGTCATTCCTTTCCAGAAAAGTaGAAGCATTTCTCATGTGGTCTCGGTTCATTTTCT | + |
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Preference number: 6 (lower is better) Translates to: RPLSVGHSFPEK*KHFSCGLGSFS Trigger: AGAAAATGAACCGAGACCACATGAGAAATGCTTCCACTTTTCTGGAAAGGAATGACCTACGGATAGAGGACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CCA 72 bp | TTTTGTTTCCTGACCTGCAGCTTTATCTCCTCTAGCTaGCTGGCTAAGCTTCTGTTTCTATTCAGCTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: FCFLTCSFISSS*LAKLLFLFSSV Trigger: AACTGAGCTGAATAGAAACAGAAGCTTAGCCAGCCAGCTAGAGGAGATAAAGCTGCAGGTCAGGAAACAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CAA 90 bp | ATTGGAGCTTTAGAATTTGAAAAATTGGCATCAGCCGCTAGGCCATaGGCAGTCTTTTTACCCTTAGAAAGTCCTTCTGAGGAGGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: IGALEFEKLASAARP*AVFLPLESPSEEAF Trigger: AAAAGCCTCCTCAGAAGGACTTTCTAAGGGTAAAAAGACTGCCAATGGCCTAGCGGCTGATGCCAATTTTTCAAATTCTAAAGCTCCAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CAA 72 bp | TTAGAATTTGAAAAATTGGCATCAGCCGCTAGGCCATaGGCAGTCTTTTTACCCTTAGAAAGTCCTTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: LEFEKLASAARP*AVFLPLESPSE Trigger: CTCAGAAGGACTTTCTAAGGGTAAAAAGACTGCCAATGGCCTAGCGGCTGATGCCAATTTTTCAAATTCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CAA 90 bp | TCTTTCACTTTGACTCTGAGCATTTCCAACTCAGAAGAGATTTTCTaGGTCAGATTTCTCTCTTCATTGAGGCTCAAACAAAGCTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: SFTLTLSISNSEEIF*VRFLSSLRLKQSWE Trigger: TTCCCAGCTTTGTTTGAGCCTCAATGAAGAGAGAAATCTGACCAAGAAAATCTCTTCTGAGTTGGAAATGCTCAGAGTCAAAGTGAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CAA 90 bp | TCAGTTTTATCTAAGCGGTCCTCTGAAGATTCTAGCTCTTTCACTTaGACTCTGAGCATTTCCAACTCAGAAGAGATTTTCTTGGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: SVLSKRSSEDSSSFT*TLSISNSEEIFLVR Trigger: TCTGACCAAGAAAATCTCTTCTGAGTTGGAAATGCTCAGAGTCAAAGTGAAAGAGCTAGAATCTTCAGAGGACCGCTTAGATAAAACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CAA 90 bp | TGTCTTCCATCACAACTGCTACAGGCTGATCAACTCCTTCTTTATTaGGCAATGAAAAGCCCTGAAGTATATTTTCTTGGCTTCTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: CLPSQLLQADQLLLY*AMKSPEVYFLGFLN Trigger: GTTCAAGAAGCCAAGAAAATATACTTCAGGGCTTTTCATTGCCAAATAAAGAAGGAGTTGATCAGCCTGTAGCAGTTGTGATGGAAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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| CDS CAA 72 bp | TCACAACTGCTACAGGCTGATCAACTCCTTCTTTATTaGGCAATGAAAAGCCCTGAAGTATATTTTCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: SQLLQADQLLLY*AMKSPEVYFLG Trigger: GCCAAGAAAATATACTTCAGGGCTTTTCATTGCCAAATAAAGAAGGAGTTGATCAGCCTGTAGCAGTTGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001116.5 ENSMUST00000063021.7 ENSMUST00000105849.9 ENSMUST00000170102.8 |
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