Pregenerated sensors for LURAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028701Ensembl transcript IDs: ENSMUST00000030469.5
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCCTGGAGGAACAGGCACGCACAGTGGAACTGGAAGGGAGAAACTaGCAAGAACCCGGCCTGCAGAAACCCTTGGTCACAAGGGCTCCA | + |
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Preference number: 1 (lower is better) Translates to: CLEEQARTVELEGRN*QEPGLQKPLVTRAP Trigger: TGGAGCCCTTGTGACCAAGGGTTTCTGCAGGCCGGGTTCTTGGCAGTTTCTCCCTTCCAGTTCCACTGTGCGTGCCTGTTCCTCCAGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR CCA 90 bp | GCTGGGAGTGTAATTACCTCTGCCTGGAGGAACAGGCACGCACAGTaGAACTGGAAGGGAGAAACTGCCAAGAACCCGGCCTGCAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: AGSVITSAWRNRHAQ*NWKGETAKNPACRN Trigger: GTTTCTGCAGGCCGGGTTCTTGGCAGTTTCTCCCTTCCAGTTCCACTGTGCGTGCCTGTTCCTCCAGGCAGAGGTAATTACACTCCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR GCA 90 bp | TTCTCAGGGGGACCTGGGTTAGTCTGCTGGGAGTGTAATTACCTCTaGCTGGAGGAACAGGCACGCACAGTGGAACTGGAAGGGAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: FSGGPGLVCWECNYL*LEEQARTVELEGRN Trigger: GTTTCTCCCTTCCAGTTCCACTGTGCGTGCCTGTTCCTCCAGGCAGAGGTAATTACACTCCCAGCAGACTAACCCAGGTCCCCCTGAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR GCA 90 bp | TATAAGTCTGAATCCTTTCTTGAGGCCAGCCTAAAGCTTGCGACCTaGCTGCCCCAGCCTCCTGAGAGCTGGGATTGCCAGCATGTACTA | + |
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Preference number: 1 (lower is better) Translates to: YKSESFLEASLKLAT*LPQPPESWDCQHVL Trigger: TAGTACATGCTGGCAATCCCAGCTCTCAGGAGGCTGGGGCAGGCAGGTCGCAAGCTTTAGGCTGGCCTCAAGAAAGGATTCAGACTTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR CCA 90 bp | ACAGGAGGCAGCGGCAGGGACATTAAGTGCCACACCCACCAGGACTaGTACAGAGGAAGCACTTCATGTATCATGACAGGCAATGAAGTC | + |
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Preference number: 1 (lower is better) Translates to: TGGSGRDIKCHTHQD*YRGSTSCIMTGNEV Trigger: GACTTCATTGCCTGTCATGATACATGAAGTGCTTCCTCTGTACCAGTCCTGGTGGGTGTGGCACTTAATGTCCCTGCCGCTGCCTCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR CCA 90 bp | AGGGCAAGAAAGCAGGAGTCCCAGAGTTATGGGCACAGTAAGGGGTaGTTGAACTCCACAGATAATGGGTGCCCAGAGGAAGGAAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: RARKQESQSYGHSKG*LNSTDNGCPEEGRV Trigger: GACTCTTCCTTCCTCTGGGCACCCATTATCTGTGGAGTTCAACCACCCCTTACTGTGCCCATAACTCTGGGACTCCTGCTTTCTTGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR TCA 90 bp | CAAGAAAGCAGGAGTCCCAGAGTTATGGGCACAGTAAGGGGTGGTTaGACTCCACAGATAATGGGTGCCCAGAGGAAGGAAGAGTCTGAA | + |
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Preference number: 1 (lower is better) Translates to: QESRSPRVMGTVRGG*TPQIMGAQRKEESE Trigger: TTCAGACTCTTCCTTCCTCTGGGCACCCATTATCTGTGGAGTTCAACCACCCCTTACTGTGCCCATAACTCTGGGACTCCTGCTTTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR TCA 90 bp | TCAACTCAGAGTATGGACTGGGATACAGCACTCAAAATTCCAGCCTaGGGGCAAGAAAGCAGGAGTCCCAGAGTTATGGGCACAGTAAGG | + |
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Preference number: 1 (lower is better) Translates to: STQSMDWDTALKIPA*GQESRSPRVMGTVR Trigger: CCTTACTGTGCCCATAACTCTGGGACTCCTGCTTTCTTGCCCTCAGGCTGGAATTTTGAGTGCTGTATCCCAGTCCATACTCTGAGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR TCA 90 bp | AACCACCACCACTCCCCACTTCTATCAAATACTCACCCTAACACCTaGCCTCTCCCACAGTCTCATGTTGCCTGGACAGATGAAATCAGG | + |
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Preference number: 1 (lower is better) Translates to: NHHHSPLLSNTHPNT*PLPQSHVAWTDEIR Trigger: CCTGATTTCATCTGTCCAGGCAACATGAGACTGTGGGAGAGGTCAGGTGTTAGGGTGAGTATTTGATAGAAGTGGGGAGTGGTGGTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR CCA 90 bp | AATTCATTACATCAGCAGCAACAAATCGATATACTGCTGTTCTCCTaGGAGAATGAGGAAGTGTGGCCGAGCGGGGATGAAGTGAGGGGC | + |
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Preference number: 1 (lower is better) Translates to: NSLHQQQQIDILLFS*ENEEVWPSGDEVRG Trigger: GCCCCTCACTTCATCCCCGCTCGGCCACACTTCCTCATTCTCCCAGGAGAACAGCAGTATATCGATTTGTTGCTGCTGATGTAATGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR TCA 90 bp | TCCCAGGTCCTGTTTCCAAAGCTACCATCTTGGAATTATGAGTTCTaGGGAAGACCCTGGCATACTTGGAGAGCAGTGTGCTTCCTCAGA | + |
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Preference number: 1 (lower is better) Translates to: SQVLFPKLPSWNYEF*GRPWHTWRAVCFLR Trigger: TCTGAGGAAGCACACTGCTCTCCAAGTATGCCAGGGTCTTCCTCAGAACTCATAATTCCAAGATGGTAGCTTTGGAAACAGGACCTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR GCA 90 bp | TGCTATGTAGTTGAAGATGACTCTGAACTCCTGATCTGTATCCAGTaGTGGGATTACAGGCCAGGTGTGTGCCACTATACCCAGGCAAGT | + |
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Preference number: 1 (lower is better) Translates to: CYVVEDDSELLICIQ*WDYRPGVCHYTQAS Trigger: ACTTGCCTGGGTATAGTGGCACACACCTGGCCTGTAATCCCAGCACTGGATACAGATCAGGAGTTCAGAGTCATCTTCAACTACATAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR CCA 90 bp | TTCCTTGTGTCTCAACTTCAGGCAAGCATCCTTGTGACCAAATTGTaGAAGGCTGGCCAGAATGAGGGAATAGTAAGCAAGCACAGGGGT | + |
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Preference number: 1 (lower is better) Translates to: FLVSQLQASILVTKL*KAGQNEGIVSKHRG Trigger: ACCCCTGTGCTTGCTTACTATTCCCTCATTCTGGCCAGCCTTCCACAATTTGGTCACAAGGATGCTTGCCTGAAGTTGAGACACAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR TCA 90 bp | CAGACAGACAGAGCGTCTCATATAGTCAGTACAGTCAGGCTGGCTTaGACTTGCTATGTAGTTGAAGATGACTCTGAACTCCTGATCTGT | + |
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Preference number: 1 (lower is better) Translates to: QTDRASHIVSTVRLA*TCYVVEDDSELLIC Trigger: ACAGATCAGGAGTTCAGAGTCATCTTCAACTACATAGCAAGTTCAAGCCAGCCTGACTGTACTGACTATATGAGACGCTCTGTCTGTCTG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR GCA 90 bp | AAATTTATAGTAATTCATTACATCAGCAGCAACAAATCGATATACTaGTGTTCTCCTGGGAGAATGAGGAAGTGTGGCCGAGCGGGGATG | + |
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Preference number: 1 (lower is better) Translates to: KFIVIHYISSNKSIY*CSPGRMRKCGRAGM Trigger: CATCCCCGCTCGGCCACACTTCCTCATTCTCCCAGGAGAACAGCAGTATATCGATTTGTTGCTGCTGATGTAATGAATTACTATAAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR TCA 90 bp | TTCTTATATCTTACATTTCTTTGTGGGTGTATACACAGTATTCTCTaGGCATGCGTAATTGAATACTCAGCCTGTACCTGGCACCATACC | + |
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Preference number: 1 (lower is better) Translates to: FLYLTFLCGCIHSIL*ACVIEYSACTWHHT Trigger: GGTATGGTGCCAGGTACAGGCTGAGTATTCAATTACGCATGCTCAGAGAATACTGTGTATACACCCACAAAGAAATGTAAGATATAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR-3UTR TCA 90 bp | AGCCTGAGGGCAAGAAAGCAGGAGTCCCAGAGTTATGGGCACAGTAAGGGGTGGCTACCTCCCCCAACATaGGATGGGGAAGACAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: SLRARKQESQSYGHSKGWLPPPT*DGEDRA Trigger: TGCCCTGTCTTCCCCATCTCATGTTGGGGGAGGTAG...CCACCCCTTACTGTGCCCATAACTCTGGGACTCCTGCTTTCTTGCCCTCAGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR-3UTR CCA 90 bp | AGCCTGAGGGCAAGAAAGCAGGAGTCCCAGAGTTATGGGCACAGTAAGGGGTGGATGCAGAGGTCTAGCTaGGCGGTAGTGGCACACACT | + |
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Preference number: 2 (lower is better) Translates to: SLRARKQESQSYGHSKGWMQRSS*AVVAHT Trigger: AGTGTGTGCCACTACCGCCCAGCTAGACCTCTGCAT...CCACCCCTTACTGTGCCCATAACTCTGGGACTCCTGCTTTCTTGCCCTCAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR-3UTR TCA 90 bp | AGACGACAGATCTGGAGGCAGGAATCAGGGATGAGGGCAGCCCAGGGCCAGACATATCATGACAGGCAATaGAGTCACTCAGCAGGCATG | + |
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Preference number: 2 (lower is better) Translates to: RRQIWRQESGMRAAQGQTYHDRQ*SHSAGM Trigger: CATGCCTGCTGAGTGACTTCATTGCCTGTCATGATA...TGTCTGGCCCTGGGCTGCCCTCATCCCTGATTCCTGCCTCCAGATCTGTCGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR-3UTR TCA 90 bp | CCAGCATGCCCTTCACCTAGTCAGGTTGAAATCCCTCTCCTCTCCTCTAAAGACCAGCACTCAGGAGGCTaGGGTAGCCAGATCTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: PACPSPSQVEIPLLSSKDQHSGG*GSQICE Trigger: CTCACAGATCTGGCTACCTCAGCCTCCTGAGTGCTG...GTCTTTAGAGGAGAGGAGAGGGATTTCAACCTGACTAGGTGAAGGGCATGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR-3UTR TCA 90 bp | ATCGTGCCCAGGAATATTGTACTCTGTGGAATAAGTGAAAAACACGCCCTCCACCCTGCCCCAGCCTCCTaGGAGCTGGGATTGCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: IVPRNIVLCGISEKHALHPAPAS*ELGLPA Trigger: TGCTGGCAATCCCAGCTCTCAGGAGGCTGGGGCAGG...GTGGAGGGCGTGTTTTTCACTTATTCCACAGAGTACAATATTCCTGGGCACGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR-3UTR TCA 90 bp | GCTCATGGACTCCTCCTGATGAAGTCTAAAATTAAGACAGGATACTCAAAGCCAGGCAGGAATCAGGGATaGGGGCAGCCCAGGGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: AHGLLLMKSKIKTGYSKPGRNQG*GQPRAR Trigger: TCTGGCCCTGGGCTGCCCTCATCCCTGATTCCTGCC...TGGCTTTGAGTATCCTGTCTTAATTTTAGACTTCATCAGGAGGAGTCCATGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGCATGCCCTTCACCTAGTCAGGTTGAAATCCCTCTCCTCTCCTCTAAAGACCACACCCACCAGGACTaGTACAGAGGAAGCACTTCA | + |
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Preference number: 2 (lower is better) Translates to: PACPSPSQVEIPLLSSKDHTHQD*YRGSTS Trigger: TGAAGTGCTTCCTCTGTACCAGTCCTGGTGGGTGTG...GTCTTTAGAGGAGAGGAGAGGGATTTCAACCTGACTAGGTGAAGGGCATGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR-3UTR TCA 90 bp | CAAAGAGGAAGGGGAGCGCTACAGATCAACTCAGAGTATGGACTGGGATACAGCAGGCAAGCATCCTTGTaGCCAAATTGTGGAAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: QRGRGALQINSEYGLGYSRQASL*PNCGRL Trigger: CAGCCTTCCACAATTTGGTCACAAGGATGCTTGCCT...GCTGTATCCCAGTCCATACTCTGAGTTGATCTGTAGCGCTCCCCTTCCTCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR-3UTR TCA 90 bp | CCAGCATGCCCTTCACCTAGTCAGGTTGAAATCCCTCTCCTCTCCTCTAAAGACATGACTCTGAACTCCTaGTCTGTATCCAGTGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: PACPSPSQVEIPLLSSKDMTLNS*SVSSAG Trigger: CCCAGCACTGGATACAGATCAGGAGTTCAGAGTCAT...GTCTTTAGAGGAGAGGAGAGGGATTTCAACCTGACTAGGTGAAGGGCATGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR-3UTR GCA 90 bp | ATCGTGCCCAGGAATATTGTACTCTGTGGAATAAGTGAAAAACACGCCCTCCACGGCAGGGACATTAAGTaGCACACCCACCAGGACTGG | + |
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Preference number: 2 (lower is better) Translates to: IVPRNIVLCGISEKHALHGRDIK*HTHQDW Trigger: CCAGTCCTGGTGGGTGTGGCACTTAATGTCCCTGCC...GTGGAGGGCGTGTTTTTCACTTATTCCACAGAGTACAATATTCCTGGGCACGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR-3UTR GCA 90 bp | CAAAGAGGAAGGGGAGCGCTACAGATCAACTCAGAGTATGGACTGGGATACAGCAGCCAGAGGCTGTACTaGTGTTGGATTTGGTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: QRGRGALQINSEYGLGYSSQRLY*CWIWWL Trigger: CAACCACCAAATCCAACAGCAGTACAGCCTCTGGCT...GCTGTATCCCAGTCCATACTCTGAGTTGATCTGTAGCGCTCCCCTTCCTCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR-3UTR GCA 90 bp | AGCCTGAGGGCAAGAAAGCAGGAGTCCCAGAGTTATGGGCACAGTAAGGGGTGGGTTGGATTTGGTGGTTaGAAAACAACTATTGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: SLRARKQESQSYGHSKGWVGFGG*KTTIEA Trigger: TGCCTCAATAGTTGTTTTGCAACCACCAAATCCAAC...CCACCCCTTACTGTGCCCATAACTCTGGGACTCCTGCTTTCTTGCCCTCAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR-3UTR GCA 90 bp | ACCCAGCTTCTAAGCCCCAGCTCCAAAGTGCTAACTTCTCCCCCATGCCTGAACATGGAACTGTGGGTTTaGAGACAGACAGTAAAGTCT | + |
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Preference number: 2 (lower is better) Translates to: TQLLSPSSKVLTSPPCLNMELWV*RQTVKS Trigger: AGACTTTACTGTCTGTCTGCAAACCCACAGTTCCAT...GTTCAGGCATGGGGGAGAAGTTAGCACTTTGGAGCTGGGGCTTAGAAGCTGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR-3UTR CCA 90 bp | ATCGTGCCCAGGAATATTGTACTCTGTGGAATAAGTGAAAAACACGCCCTCCACCACTGGGGAGGGGCATaGAGATACCCTTACAACAGG | + |
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Preference number: 2 (lower is better) Translates to: IVPRNIVLCGISEKHALHHWGGA*RYPYNR Trigger: CCTGTTGTAAGGGTATCTCCATGCCCCTCCCCAGTG...GTGGAGGGCGTGTTTTTCACTTATTCCACAGAGTACAATATTCCTGGGCACGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR-3UTR CCA 90 bp | ACCCAGCTTCTAAGCCCCAGCTCCAAAGTGCTAACTTCTCCCCCATGCCTGAACAGTTTTCAAATCCTTTaGGGCTTTGGGGTGTTGACT | + |
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Preference number: 2 (lower is better) Translates to: TQLLSPSSKVLTSPPCLNSFQIL*GFGVLT Trigger: AGTCAACACCCCAAAGCCCCAAAGGATTTGAAAACT...GTTCAGGCATGGGGGAGAAGTTAGCACTTTGGAGCTGGGGCTTAGAAGCTGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR CAA 90 bp | GGATTCCTTGTGTCTCAACTTCAGGCAAGCATCCTTGTGACCAAATaGTGGAAGGCTGGCCAGAATGAGGGAATAGTAAGCAAGCACAGG | + |
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Preference number: 2 (lower is better) Translates to: GFLVSQLQASILVTK*WKAGQNEGIVSKHR Trigger: CCTGTGCTTGCTTACTATTCCCTCATTCTGGCCAGCCTTCCACAATTTGGTCACAAGGATGCTTGCCTGAAGTTGAGACACAAGGAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR-3UTR TCA 90 bp | ATCGTGCCCAGGAATATTGTACTCTGTGGAATAAGTGAAAAACACGCCCTCCACCCATCTCTTCTTCAGTaGTCTCCTAGAGGCCCTACG | + |
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Preference number: 2 (lower is better) Translates to: IVPRNIVLCGISEKHALHPSLLQ*SPRGPT Trigger: CGTAGGGCCTCTAGGAGATCACTGAAGAAGAGATGG...GTGGAGGGCGTGTTTTTCACTTATTCCACAGAGTACAATATTCCTGGGCACGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR-3UTR TCA 90 bp | CCAGCATGCCCTTCACCTAGTCAGGTTGAAATCCCTCTCCTCTCCTCTAAAGACAGGCTGAAGTCACTTTaGAATGTGACCACTTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: PACPSPSQVEIPLLSSKDRLKSL*NVTTLR Trigger: CCTCAAAGTGGTCACATTTCAAAGTGACTTCAGCCT...GTCTTTAGAGGAGAGGAGAGGGATTTCAACCTGACTAGGTGAAGGGCATGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR-3UTR TCA 90 bp | AGAGGCCTTACAGTCACACTGAGCTCCTCCTACTATGGCTTATTGATTACCTATTGTTGCCTGGACAGATaGAATCAGGGTGGCCAGACC | + |
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Preference number: 2 (lower is better) Translates to: RGLTVTLSSSYYGLLITYCCLDR*NQGGQT Trigger: GGTCTGGCCACCCTGATTTCATCTGTCCAGGCAACA...ATAGGTAATCAATAAGCCATAGTAGGAGGAGCTCAGTGTGACTGTAAGGCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR-3UTR GCA 90 bp | GAGGATTGCCATGTGTTCCAGACAAGATTGAACTACGTAGTGAGTGCCATGCCATCCACAGATAATGGGTaGCCAGAGGAAGGAAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: EDCHVFQTRLNYVVSAMPSTDNG*PEEGRV Trigger: GACTCTTCCTTCCTCTGGGCACCCATTATCTGTGGA...TGGCATGGCACTCACTACGTAGTTCAATCTTGTCTGGAACACATGGCAATCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR-3UTR CCA 90 bp | ATCGTGCCCAGGAATATTGTACTCTGTGGAATAAGTGAAAAACACGCCCTCCACTCCCCCAACATGAGATaGGGAAGACAGGGCAGTTAC | + |
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Preference number: 2 (lower is better) Translates to: IVPRNIVLCGISEKHALHSPNMR*GRQGSY Trigger: GTAACTGCCCTGTCTTCCCCATCTCATGTTGGGGGA...GTGGAGGGCGTGTTTTTCACTTATTCCACAGAGTACAATATTCCTGGGCACGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR CAA 90 bp | GAGGAGAGGGTCTTTAAAGAGCCAGAGGCTGTACTGCTGTTGGATTaGGTGGTTGCAAAACAACTATTGAGGCATTGGAGCTTGGAGACA | + |
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Preference number: 2 (lower is better) Translates to: EERVFKEPEAVLLLD*VVAKQLLRHWSLET Trigger: TGTCTCCAAGCTCCAATGCCTCAATAGTTGTTTTGCAACCACCAAATCCAACAGCAGTACAGCCTCTGGCTCTTTAAAGACCCTCTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR-3UTR TCA 90 bp | CCAGCATGCCCTTCACCTAGTCAGGTTGAAATCCCTCTCCTCTCCTCTAAAGACACTTGGGCCAAAAGTTaGAAGAGCCACAAAGTACAA | + |
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Preference number: 2 (lower is better) Translates to: PACPSPSQVEIPLLSSKDTWAKS*KSHKVQ Trigger: TTGTACTTTGTGGCTCTTTCAACTTTTGGCCCAAGT...GTCTTTAGAGGAGAGGAGAGGGATTTCAACCTGACTAGGTGAAGGGCATGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR-3UTR TCA 90 bp | GCTCATGGACTCCTCCTGATGAAGTCTAAAATTAAGACAGGATACTCAAAGCCAGAGGAAGGAAGAGTCTaGACCCCAGAGCTATGGGCA | + |
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Preference number: 2 (lower is better) Translates to: AHGLLLMKSKIKTGYSKPEEGRV*TPELWA Trigger: TGCCCATAGCTCTGGGGTTCAGACTCTTCCTTCCTC...TGGCTTTGAGTATCCTGTCTTAATTTTAGACTTCATCAGGAGGAGTCCATGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR-3UTR CCA 90 bp | GAGGATTGCCATGTGTTCCAGACAAGATTGAACTACGTAGTGAGTGCCATGCCACTTGTGACCAAATTGTaGAAGGCTGGCCAGAATGAG | + |
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Preference number: 2 (lower is better) Translates to: EDCHVFQTRLNYVVSAMPLVTKL*KAGQNE Trigger: CTCATTCTGGCCAGCCTTCCACAATTTGGTCACAAG...TGGCATGGCACTCACTACGTAGTTCAATCTTGTCTGGAACACATGGCAATCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR-3UTR TCA 90 bp | AGAGGCCTTACAGTCACACTGAGCTCCTCCTACTATGGCTTATTGATTACCTATGAAGGCTGGCCAGAATaGGGGAATAGTAAGCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: RGLTVTLSSSYYGLLITYEGWPE*GNSKQA Trigger: TGCTTGCTTACTATTCCCTCATTCTGGCCAGCCTTC...ATAGGTAATCAATAAGCCATAGTAGGAGGAGCTCAGTGTGACTGTAAGGCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR-3UTR CCA 90 bp | AGAGGCCTTACAGTCACACTGAGCTCCTCCTACTATGGCTTATTGATTACCTATAATCCTTTGGGGCTTTaGGGTGTTGACTGGGTAGTG | + |
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Preference number: 2 (lower is better) Translates to: RGLTVTLSSSYYGLLITYNPLGL*GVDWVV Trigger: CACTACCCAGTCAACACCCCAAAGCCCCAAAGGATT...ATAGGTAATCAATAAGCCATAGTAGGAGGAGCTCAGTGTGACTGTAAGGCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR-3UTR GCA 90 bp | AGAGGCCTTACAGTCACACTGAGCTCCTCCTACTATGGCTTATTGATTACCTATGAACTACGTAGTGAGTaGCATGCCAACACTGACTAC | + |
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Preference number: 2 (lower is better) Translates to: RGLTVTLSSSYYGLLITYELRSE*HANTDY Trigger: GTAGTCAGTGTTGGCATGGCACTCACTACGTAGTTC...ATAGGTAATCAATAAGCCATAGTAGGAGGAGCTCAGTGTGACTGTAAGGCCTCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR-3UTR TCA 90 bp | AGAGGCCTTACAGTCACACTGAGCTCCTCCTACTATGGCTTATTGATTACCTATAGTTTCAGGACAGCCTaGGATACACAGAAAAACCCT | + |
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Preference number: 2 (lower is better) Translates to: RGLTVTLSSSYYGLLITYSFRTA*DTQKNP Trigger: AGGGTTTTTCTGTGTATCTCAGGCTGTCCTGAAACT...ATAGGTAATCAATAAGCCATAGTAGGAGGAGCTCAGTGTGACTGTAAGGCCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR-3UTR TCA 90 bp | AGAGGCCTTACAGTCACACTGAGCTCCTCCTACTATGGCTTATTGATTACCTATGCCAGTGCTATGTATTaGGATCCTGTCTCAAAACAC | + |
|
Preference number: 2 (lower is better) Translates to: RGLTVTLSSSYYGLLITYASAMY*DPVSKH Trigger: GTGTTTTGAGACAGGATCTCAATACATAGCACTGGC...ATAGGTAATCAATAAGCCATAGTAGGAGGAGCTCAGTGTGACTGTAAGGCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR-3UTR GCA 90 bp | TTATTTGTCCAGGTATTAACCACATCCTTTGTCTCCTACTCTGCCCATACCCTTGGCCAGACAAGAGTCTaGAGTAAAGTAAGCCAAACA | + |
|
Preference number: 2 (lower is better) Translates to: LFVQVLTTSFVSYSAHTLGQTRV*SKVSQT Trigger: TGTTTGGCTTACTTTACTGCAGACTCTTGTCTGGCC...AAGGGTATGGGCAGAGTAGGAGACAAAGGATGTGGTTAATACCTGGACAAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR-3UTR GCA 90 bp | GCTCATGGACTCCTCCTGATGAAGTCTAAAATTAAGACAGGATACTCAAAGCCACAACTCAAGCAATGTTaGATAATGGCCACAAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: AHGLLLMKSKIKTGYSKPQLKQC*IMATRR Trigger: CCTCCTTGTGGCCATTATGCAACATTGCTTGAGTTG...TGGCTTTGAGTATCCTGTCTTAATTTTAGACTTCATCAGGAGGAGTCCATGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR-3UTR CCA 90 bp | AGAGGCCTTACAGTCACACTGAGCTCCTCCTACTATGGCTTATTGATTACCTATTACTGCTGTTGGATTTaGTGGTTGCAAAACAACTAT | + |
|
Preference number: 2 (lower is better) Translates to: RGLTVTLSSSYYGLLITYYCCWI*WLQNNY Trigger: ATAGTTGTTTTGCAACCACCAAATCCAACAGCAGTA...ATAGGTAATCAATAAGCCATAGTAGGAGGAGCTCAGTGTGACTGTAAGGCCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR GCA 72 bp | GAATCCTTTCTTGAGGCCAGCCTAAAGCTTGCGACCTaGCTGCCCCAGCCTCCTGAGAGCTGGGATTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: ESFLEASLKLAT*LPQPPESWDCQ Trigger: CTGGCAATCCCAGCTCTCAGGAGGCTGGGGCAGGCAGGTCGCAAGCTTTAGGCTGGCCTCAAGAAAGGATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR GCA 72 bp | TTCCCTATCACAGGAGGCAGCGGCAGGGACATTAAGTaGCACACCCACCAGGACTGGTACAGAGGAAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: FPITGGSGRDIK*HTHQDWYRGST Trigger: AGTGCTTCCTCTGTACCAGTCCTGGTGGGTGTGGCACTTAATGTCCCTGCCGCTGCCTCCTGTGATAGGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR GCA 72 bp | GAACAGGCACGCACAGTGGAACTGGAAGGGAGAAACTaGCAAGAACCCGGCCTGCAGAAACCCTTGGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: EQARTVELEGRN*QEPGLQKPLVT Trigger: TGTGACCAAGGGTTTCTGCAGGCCGGGTTCTTGGCAGTTTCTCCCTTCCAGTTCCACTGTGCGTGCCTGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR CCA 72 bp | GTAATTACCTCTGCCTGGAGGAACAGGCACGCACAGTaGAACTGGAAGGGAGAAACTGCCAAGAACCCGGCC | + |
|
Preference number: 3 (lower is better) Translates to: VITSAWRNRHAQ*NWKGETAKNPA Trigger: GGCCGGGTTCTTGGCAGTTTCTCCCTTCCAGTTCCACTGTGCGTGCCTGTTCCTCCAGGCAGAGGTAATTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR GCA 72 bp | GGACCTGGGTTAGTCTGCTGGGAGTGTAATTACCTCTaGCTGGAGGAACAGGCACGCACAGTGGAACTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GPGLVCWECNYL*LEEQARTVELE Trigger: TTCCAGTTCCACTGTGCGTGCCTGTTCCTCCAGGCAGAGGTAATTACACTCCCAGCAGACTAACCCAGGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR GCA 72 bp | TTACTGGTCTGGGCTTGCCTGATGTCCAGACCAGCATaGCCTTCACCTAGTCAGGTTGAAATCCCTCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LLVWACLMSRPA*PSPSQVEIPLL Trigger: GAGGAGAGGGATTTCAACCTGACTAGGTGAAGGGCATGCTGGTCTGGACATCAGGCAAGCCCAGACCAGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR GCA 72 bp | TGGAACTGGAAGGGAGAAACTGCCAAGAACCCGGCCTaGAGAAACCCTTGGTCACAAGGGCTCCAGGTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: WNWKGETAKNPA*RNPWSQGLQVL Trigger: TAAAACCTGGAGCCCTTGTGACCAAGGGTTTCTGCAGGCCGGGTTCTTGGCAGTTTCTCCCTTCCAGTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR TCA 72 bp | AGGAGTCCCAGAGTTATGGGCACAGTAAGGGGTGGTTaGACTCCACAGATAATGGGTGCCCAGAGGAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RSPRVMGTVRGG*TPQIMGAQRKE Trigger: TTCCTTCCTCTGGGCACCCATTATCTGTGGAGTTCAACCACCCCTTACTGTGCCCATAACTCTGGGACTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR CCA 72 bp | GGAGAAACTGCCAAGAACCCGGCCTGCAGAAACCCTTaGTCACAAGGGCTCCAGGTTTTAAAAACCCTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GETAKNPACRNP*SQGLQVLKTLR Trigger: CCTTAGGGTTTTTAAAACCTGGAGCCCTTGTGACCAAGGGTTTCTGCAGGCCGGGTTCTTGGCAGTTTCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR-3UTR CAA 90 bp | ACCCAGCTTCTAAGCCCCAGCTCCAAAGTGCTAACTTCTCCCCCATGCCTGAACATCCTTGTGACCAAATaGTGGAAGGCTGGCCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: TQLLSPSSKVLTSPPCLNILVTK*WKAGQN Trigger: ATTCTGGCCAGCCTTCCACAATTTGGTCACAAGGAT...GTTCAGGCATGGGGGAGAAGTTAGCACTTTGGAGCTGGGGCTTAGAAGCTGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR-3UTR CAA 90 bp | ACCCAGCTTCTAAGCCCCAGCTCCAAAGTGCTAACTTCTCCCCCATGCCTGAACAGACAAAGGGATTCCTaGTGTCTCAACTTCAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: TQLLSPSSKVLTSPPCLNRQRDS*CLNFRQ Trigger: TTGCCTGAAGTTGAGACACAAGGAATCCCTTTGTCT...GTTCAGGCATGGGGGAGAAGTTAGCACTTTGGAGCTGGGGCTTAGAAGCTGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR-3UTR CAA 90 bp | ACCCAGCTTCTAAGCCCCAGCTCCAAAGTGCTAACTTCTCCCCCATGCCTGAACGAGGCTGAAGTCACTTaGAAATGTGACCACTTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: TQLLSPSSKVLTSPPCLNEAEVT*KCDHFE Trigger: CTCAAAGTGGTCACATTTCAAAGTGACTTCAGCCTC...GTTCAGGCATGGGGGAGAAGTTAGCACTTTGGAGCTGGGGCTTAGAAGCTGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR TCA 72 bp | AGTATGGACTGGGATACAGCACTCAAAATTCCAGCCTaGGGGCAAGAAAGCAGGAGTCCCAGAGTTATGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SMDWDTALKIPA*GQESRSPRVMG Trigger: GCCCATAACTCTGGGACTCCTGCTTTCTTGCCCTCAGGCTGGAATTTTGAGTGCTGTATCCCAGTCCATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR CCA 72 bp | CATCAGCAGCAACAAATCGATATACTGCTGTTCTCCTaGGAGAATGAGGAAGTGTGGCCGAGCGGGGATGAA | + |
|
Preference number: 3 (lower is better) Translates to: HQQQQIDILLFS*ENEEVWPSGDE Trigger: TTCATCCCCGCTCGGCCACACTTCCTCATTCTCCCAGGAGAACAGCAGTATATCGATTTGTTGCTGCTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR-3UTR CAA 90 bp | CTAATTTCACCCAACCCAGCTTCTAAGCCCCAGCTCCAAAGTGCTAACTTCTCCGAGGTGGAGGAAAAATaGAGGGAGACTTGGGCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LISPNPASKPQLQSANFSEVEEK*RETWAK Trigger: TTTGGCCCAAGTCTCCCTCAATTTTTCCTCCACCTC...GGAGAAGTTAGCACTTTGGAGCTGGGGCTTAGAAGCTGGGTTGGGTGAAATTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR TCA 72 bp | GTAGAGCCAGTCCTGATTATCCATCAAGTCCAGGAGTaGTGGGCTCGCCCTAAAGAAGGACTTTGCATTGTC | + |
|
Preference number: 3 (lower is better) Translates to: VEPVLIIHQVQE*WARPKEGLCIV Trigger: GACAATGCAAAGTCCTTCTTTAGGGCGAGCCCATCACTCCTGGACTTGATGGATAATCAGGACTGGCTCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR TCA 72 bp | CACTCCCCACTTCTATCAAATACTCACCCTAACACCTaGCCTCTCCCACAGTCTCATGTTGCCTGGACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: HSPLLSNTHPNT*PLPQSHVAWTD Trigger: ATCTGTCCAGGCAACATGAGACTGTGGGAGAGGTCAGGTGTTAGGGTGAGTATTTGATAGAAGTGGGGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR TCA 72 bp | GATTCCTTGTGTCTCAACTTCAGGCAAGCATCCTTGTaGCCAAATTGTGGAAGGCTGGCCAGAATGAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: DSLCLNFRQASL*PNCGRLARMRE Trigger: TTCCCTCATTCTGGCCAGCCTTCCACAATTTGGTCACAAGGATGCTTGCCTGAAGTTGAGACACAAGGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR TCA 72 bp | ATTGAGATCCTGTCTCAAAACACGGGAATCTCAGAATaGCTCCCGCATGTCCCCTGTCCAACGCTTTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: IEILSQNTGISE*LPHVPCPTLSN Trigger: GTTTGAAAGCGTTGGACAGGGGACATGCGGGAGTCATTCTGAGATTCCCGTGTTTTGAGACAGGATCTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR GCA 72 bp | AGAGCCAGAGGCTGTACTGCTGTTGGATTTGGTGGTTaGAAAACAACTATTGAGGCATTGGAGCTTGGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: RARGCTAVGFGG*KTTIEALELGD Trigger: GTCTCCAAGCTCCAATGCCTCAATAGTTGTTTTGCAACCACCAAATCCAACAGCAGTACAGCCTCTGGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR CCA 72 bp | TTTTTGAGACTGGGTCTCACTATGTGTTATCTTGGCTaGCCTGGAACTCATAGAGATCCACCCAACTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: FLRLGLTMCYLG*PGTHRDPPNSA Trigger: GGCAGAGTTGGGTGGATCTCTATGAGTTCCAGGCCAGCCAAGATAACACATAGTGAGACCCAGTCTCAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR-3UTR CAA 90 bp | CTAATTTCACCCAACCCAGCTTCTAAGCCCCAGCTCCAAAGTGCTAACTTCTCCGACTTGGGCCAAAAGTaGAAAGAGCCACAAAGTACA | + |
|
Preference number: 3 (lower is better) Translates to: LISPNPASKPQLQSANFSDLGQK*KEPQST Trigger: TGTACTTTGTGGCTCTTTCAACTTTTGGCCCAAGTC...GGAGAAGTTAGCACTTTGGAGCTGGGGCTTAGAAGCTGGGTTGGGTGAAATTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGAGGAAGGGGAGCGCTACAGATCAACTCAGAGTATGGACTGGGATACAGCGTACTGCTGTTGGATTaGGTGGTTGCAAAACAACTA | + |
|
Preference number: 3 (lower is better) Translates to: QRGRGALQINSEYGLGYSVLLLD*VVAKQL Trigger: TAGTTGTTTTGCAACCACCAAATCCAACAGCAGTAC...GCTGTATCCCAGTCCATACTCTGAGTTGATCTGTAGCGCTCCCCTTCCTCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR-3UTR CAA 90 bp | CTAATTTCACCCAACCCAGCTTCTAAGCCCCAGCTCCAAAGTGCTAACTTCTCCAAAATTGAGGGAGACTaGGGCCAAAAGTTGAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LISPNPASKPQLQSANFSKIEGD*GQKLKE Trigger: CTCTTTCAACTTTTGGCCCAAGTCTCCCTCAATTTT...GGAGAAGTTAGCACTTTGGAGCTGGGGCTTAGAAGCTGGGTTGGGTGAAATTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR-3UTR CAA 90 bp | TTATTTGTCCAGGTATTAACCACATCCTTTGTCTCCTACTCTGCCCATACCCTTGCAGGCATGAAAGGATaGGTCTCCCAACTCCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LFVQVLTTSFVSYSAHTLAGMKG*VSQLQR Trigger: CCTTTGGAGTTGGGAGACCAATCCTTTCATGCCTGC...AAGGGTATGGGCAGAGTAGGAGACAAAGGATGTGGTTAATACCTGGACAAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR-3UTR CAA 90 bp | GAGGATTGCCATGTGTTCCAGACAAGATTGAACTACGTAGTGAGTGCCATGCCAGTTGCAAAACAACTATaGAGGCATTGGAGCTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: EDCHVFQTRLNYVVSAMPVAKQL*RHWSLE Trigger: CTCCAAGCTCCAATGCCTCAATAGTTGTTTTGCAAC...TGGCATGGCACTCACTACGTAGTTCAATCTTGTCTGGAACACATGGCAATCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR TCA 72 bp | GTACAGAGGAAGCACTTCATGTATCATGACAGGCAATaGAGTCACTCAGCAGGCATGAAAGGATTGGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: VQRKHFMYHDRQ*SHSAGMKGLVS Trigger: GGAGACCAATCCTTTCATGCCTGCTGAGTGACTTCATTGCCTGTCATGATACATGAAGTGCTTCCTCTGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR TCA 72 bp | CTGTTTCCAAAGCTACCATCTTGGAATTATGAGTTCTaGGGAAGACCCTGGCATACTTGGAGAGCAGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LFPKLPSWNYEF*GRPWHTWRAVC Trigger: GCACACTGCTCTCCAAGTATGCCAGGGTCTTCCTCAGAACTCATAATTCCAAGATGGTAGCTTTGGAAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR CCA 72 bp | TCTCAACTTCAGGCAAGCATCCTTGTGACCAAATTGTaGAAGGCTGGCCAGAATGAGGGAATAGTAAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SQLQASILVTKL*KAGQNEGIVSK Trigger: CTTGCTTACTATTCCCTCATTCTGGCCAGCCTTCCACAATTTGGTCACAAGGATGCTTGCCTGAAGTTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGCCTTACAGTCACACTGAGCTCCTCCTACTATGGCTTATTGATTACCTATGCAACTCAAGCAATGTaGCATAATGGCCACAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: RGLTVTLSSSYYGLLITYATQAM*HNGHKE Trigger: CTCCTTGTGGCCATTATGCAACATTGCTTGAGTTGC...ATAGGTAATCAATAAGCCATAGTAGGAGGAGCTCAGTGTGACTGTAAGGCCTCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR TCA 72 bp | TGGGTGTATACACAGTATTCTCTGAGCATGCGTAATTaGATACTCAGCCTGTACCTGGCACCATACCCACAA | + |
|
Preference number: 3 (lower is better) Translates to: WVYTQYSLSMRN*ILSLYLAPYPQ Trigger: TTGTGGGTATGGTGCCAGGTACAGGCTGAGTATTCAATTACGCATGCTCAGAGAATACTGTGTATACACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR TCA 72 bp | TACTGCTGTTGGATTTGGTGGTTGCAAAACAACTATTaGGGCATTGGAGCTTGGAGACAGGAGAGTAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: YCCWIWWLQNNY*GIGAWRQESSQ Trigger: TTGACTACTCTCCTGTCTCCAAGCTCCAATGCCTCAATAGTTGTTTTGCAACCACCAAATCCAACAGCAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR TCA 72 bp | ACAATGTTGAGTTCTAGGGCAGCCAGTGCTATGTATTaGGATCCTGTCTCAAAACACGGGAATCTCAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: TMLSSRAASAMY*DPVSKHGNLRM Trigger: CATTCTGAGATTCCCGTGTTTTGAGACAGGATCTCAATACATAGCACTGGCTGCCCTAGAACTCAACATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR GCA 72 bp | CCATGTGTTCCAGACAAGATTGAACTACGTAGTGAGTaGCATGCCAACACTGACTACAATAGATGCTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PCVPDKIELRSE*HANTDYNRCFL Trigger: CAGAAAGCATCTATTGTAGTCAGTGTTGGCATGGCACTCACTACGTAGTTCAATCTTGTCTGGAACACATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR GCA 72 bp | GTAATTCATTACATCAGCAGCAACAAATCGATATACTaGTGTTCTCCTGGGAGAATGAGGAAGTGTGGCCGA | + |
|
Preference number: 3 (lower is better) Translates to: VIHYISSNKSIY*CSPGRMRKCGR Trigger: TCGGCCACACTTCCTCATTCTCCCAGGAGAACAGCAGTATATCGATTTGTTGCTGCTGATGTAATGAATTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR-3UTR CAA 90 bp | ATCGTGCCCAGGAATATTGTACTCTGTGGAATAAGTGAAAAACACGCCCTCCACTTGAAAAGTAAGAACTaGAGAAAAGCAGCACACACA | + |
|
Preference number: 3 (lower is better) Translates to: IVPRNIVLCGISEKHALHLKSKN*RKAAHT Trigger: TGTGTGTGCTGCTTTTCTCAAGTTCTTACTTTTCAA...GTGGAGGGCGTGTTTTTCACTTATTCCACAGAGTACAATATTCCTGGGCACGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| 3UTR TCA 72 bp | CTTACATTTCTTTGTGGGTGTATACACAGTATTCTCTaGGCATGCGTAATTGAATACTCAGCCTGTACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LTFLCGCIHSIL*ACVIEYSACTW Trigger: CCAGGTACAGGCTGAGTATTCAATTACGCATGCTCAGAGAATACTGTGTATACACCCACAAAGAAATGTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| CDS-3UTR GCA 90 bp | AGACGACAGATCTGGAGGCAGGAATCAGGGATGAGGGCAGCCCAGGGCCAGACAGCAGGCTGTCCCAACTaGCCCGCCTTGAGCGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRQIWRQESGMRAAQGQTAGCPN*PALSVL Trigger: CAGGACGCTCAAGGCGGGGCAGTTGGGACAGCCTGC...TGTCTGGCCCTGGGCTGCCCTCATCCCTGATTCCTGCCTCCAGATCTGTCGTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| CDS-3UTR CCA 90 bp | AGCCTGAGGGCAAGAAAGCAGGAGTCCCAGAGTTATGGGCACAGTAAGGGGTGGCGCAAGTCCGGCGTCTaGGACTCCGCGGTCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLRARKQESQSYGHSKGWRKSGV*DSAVPS Trigger: GGAGGGGACCGCGGAGTCCCAGACGCCGGACTTGCG...CCACCCCTTACTGTGCCCATAACTCTGGGACTCCTGCTTTCTTGCCCTCAGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| CDS-3UTR TCA 90 bp | ACCCAGCTTCTAAGCCCCAGCTCCAAAGTGCTAACTTCTCCCCCATGCCTGAACCCAACTGCCCCGCCTTaGGCGTCCTGGGCTTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TQLLSPSSKVLTSPPCLNPTAPP*ASWASP Trigger: GGGGGAAGCCCAGGACGCTCAAGGCGGGGCAGTTGG...GTTCAGGCATGGGGGAGAAGTTAGCACTTTGGAGCTGGGGCTTAGAAGCTGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| CDS-3UTR CCA 90 bp | ACTCCTAGACGACAGATCTGGAGGCAGGAATCAGGGATGAGGGCAGCCCAGGGCGCCGGTCAGTTGAACTaGTGTCTGGCAGGCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TPRRQIWRQESGMRAAQGAGQLN*CLAGCP Trigger: GGGACAGCCTGCCAGACACCAGTTCAACTGACCGGC...GCCCTGGGCTGCCCTCATCCCTGATTCCTGCCTCCAGATCTGTCGTCTAGGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| CDS-3UTR GCA 90 bp | AGACGACAGATCTGGAGGCAGGAATCAGGGATGAGGGCAGCCCAGGGCCAGACATCTTCCTGCCCACCTTaGCCTCCACGTCTCGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RRQIWRQESGMRAAQGQTSSCPP*PPRLAS Trigger: ACTTGCGAGACGTGGAGGGCAAGGTGGGCAGGAAGA...TGTCTGGCCCTGGGCTGCCCTCATCCCTGATTCCTGCCTCCAGATCTGTCGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| CDS-3UTR TCA 90 bp | ACTCCTAGACGACAGATCTGGAGGCAGGAATCAGGGATGAGGGCAGCCCAGGGCAGCATTGCCATCCTCTaGTGGCTCAGGTGGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: TPRRQIWRQESGMRAAQGSIAIL*WLRWST Trigger: TGTGGACCACCTGAGCCATCAGAGGATGGCAATGCT...GCCCTGGGCTGCCCTCATCCCTGATTCCTGCCTCCAGATCTGTCGTCTAGGAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| CDS-3UTR GCA 90 bp | ACTCCTAGACGACAGATCTGGAGGCAGGAATCAGGGATGAGGGCAGCCCAGGGCCAGCAGCCAGCGCACTaGCTCAATACCCTCGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TPRRQIWRQESGMRAAQGQQPAH*LNTLVQ Trigger: TTGAACGAGGGTATTGAGGCAGTGCGCTGGCTGCTG...GCCCTGGGCTGCCCTCATCCCTGATTCCTGCCTCCAGATCTGTCGTCTAGGAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| CDS-3UTR TCA 90 bp | ACCCAGCTTCTAAGCCCCAGCTCCAAAGTGCTAACTTCTCCCCCATGCCTGAACGTCCAGCCGGTCAGTTaGACTGGTGTCTGGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TQLLSPSSKVLTSPPCLNVQPVS*TGVWQA Trigger: AGCCTGCCAGACACCAGTTCAACTGACCGGCTGGAC...GTTCAGGCATGGGGGAGAAGTTAGCACTTTGGAGCTGGGGCTTAGAAGCTGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
||
| CDS-3UTR CCA 90 bp | AGACGACAGATCTGGAGGCAGGAATCAGGGATGAGGGCAGCCCAGGGCCAGACAGTTCATCCAGCTCTCTaGGGGTCACAGTGTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RRQIWRQESGMRAAQGQTVHPAL*GSQCPR Trigger: TCTTGGACACTGTGACCCCCAGAGAGCTGGATGAAC...TGTCTGGCCCTGGGCTGCCCTCATCCCTGATTCCTGCCTCCAGATCTGTCGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS-3UTR TCA 90 bp | ACTCCTAGACGACAGATCTGGAGGCAGGAATCAGGGATGAGGGCAGCCCAGGGCTGTCCCCAGTACCAATaGGCTTCAAAGCCCTGGTTA | + |
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Preference number: 4 (lower is better) Translates to: TPRRQIWRQESGMRAAQGCPQYQ*ASKPWL Trigger: TAACCAGGGCTTTGAAGCTCATTGGTACTGGGGACA...GCCCTGGGCTGCCCTCATCCCTGATTCCTGCCTCCAGATCTGTCGTCTAGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS-3UTR GCA 90 bp | ACTCCTAGACGACAGATCTGGAGGCAGGAATCAGGGATGAGGGCAGCCCAGGGCTTCAAGGTCACCAGCTaGTGCAGGATCTTCACATCG | + |
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Preference number: 4 (lower is better) Translates to: TPRRQIWRQESGMRAAQGFKVTS*CRIFTS Trigger: CGATGTGAAGATCCTGCAGCAGCTGGTGACCTTGAA...GCCCTGGGCTGCCCTCATCCCTGATTCCTGCCTCCAGATCTGTCGTCTAGGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS-3UTR CCA 90 bp | CTAATTTCACCCAACCCAGCTTCTAAGCCCCAGCTCCAAAGTGCTAACTTCTCCTCAGGTGGTCCACACTaGAGCCCATCCCCCGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LISPNPASKPQLQSANFSSGGPH*SPSPGS Trigger: GCTCCCGGGGGATGGGCTCCAGTGTGGACCACCTGA...GGAGAAGTTAGCACTTTGGAGCTGGGGCTTAGAAGCTGGGTTGGGTGAAATTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS-3UTR CCA 90 bp | AGACGACAGATCTGGAGGCAGGAATCAGGGATGAGGGCAGCCCAGGGCCAGACAAAGGTCACATCATCCTaGCACTGTCCCCAGTACCAA | + |
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Preference number: 4 (lower is better) Translates to: RRQIWRQESGMRAAQGQTKVTSS*HCPQYQ Trigger: TTGGTACTGGGGACAGTGCCAGGATGATGTGACCTT...TGTCTGGCCCTGGGCTGCCCTCATCCCTGATTCCTGCCTCCAGATCTGTCGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS-3UTR GCA 90 bp | GGAAGGGGAGCGCTACAGATCAACTCAGAGTATGGACTGGGATACAGCACTCAACTTCAGGGATCTTCCTaGCCACCTTGCCCTCCACGT | + |
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Preference number: 4 (lower is better) Translates to: GRGALQINSEYGLGYSTQLQGSS*PPCPPR Trigger: ACGTGGAGGGCAAGGTGGGCAGGAAGATCCCTGAAG...TTGAGTGCTGTATCCCAGTCCATACTCTGAGTTGATCTGTAGCGCTCCCCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR CAA 72 bp | GAGGCATTGGAGCTTGGAGACAGGAGAGTAGTCAACTaGGCTACCTCCCCCAACATGAGATGGGGAAGACAG | + |
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Preference number: 4 (lower is better) Translates to: EALELGDRRVVN*ATSPNMRWGRQ Trigger: CTGTCTTCCCCATCTCATGTTGGGGGAGGTAGCCAAGTTGACTACTCTCCTGTCTCCAAGCTCCAATGCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR CAA 72 bp | CAGGAGTCCCAGAGTTATGGGCACAGTAAGGGGTGGTaGAACTCCACAGATAATGGGTGCCCAGAGGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: QESQSYGHSKGW*NSTDNGCPEEG Trigger: TCCTTCCTCTGGGCACCCATTATCTGTGGAGTTCAACCACCCCTTACTGTGCCCATAACTCTGGGACTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS-3UTR GCA 90 bp | AGCCTGAGGGCAAGAAAGCAGGAGTCCCAGAGTTATGGGCACAGTAAGGGGTGGAGTGGGGATAACCTTTaGCCAGTCAATCTCAGGACA | + |
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Preference number: 4 (lower is better) Translates to: SLRARKQESQSYGHSKGWSGDNL*PVNLRT Trigger: TGTCCTGAGATTGACTGGGCAAAGGTTATCCCCACT...CCACCCCTTACTGTGCCCATAACTCTGGGACTCCTGCTTTCTTGCCCTCAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS-3UTR CCA 90 bp | GAGGATTGCCATGTGTTCCAGACAAGATTGAACTACGTAGTGAGTGCCATGCCATGTCCACCTCAGTCCTaGCCCTGTCCTCAGTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: EDCHVFQTRLNYVVSAMPCPPQS*PCPQWG Trigger: TCCCCACTGAGGACAGGGCCAGGACTGAGGTGGACA...TGGCATGGCACTCACTACGTAGTTCAATCTTGTCTGGAACACATGGCAATCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS-3UTR CCA 90 bp | CCAGCATGCCCTTCACCTAGTCAGGTTGAAATCCCTCTCCTCTCCTCTAAAGACCCGGGAGCTTCCATGTaGCTGTTAAGCTCCCTAGCT | + |
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Preference number: 4 (lower is better) Translates to: PACPSPSQVEIPLLSSKDPGASM*LLSSLA Trigger: AGCTAGGGAGCTTAACAGCCACATGGAAGCTCCCGG...GTCTTTAGAGGAGAGGAGAGGGATTTCAACCTGACTAGGTGAAGGGCATGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS-3UTR GCA 90 bp | CCAGCATGCCCTTCACCTAGTCAGGTTGAAATCCCTCTCCTCTCCTCTAAAGACAAGGTCACCAGCTGCTaGAGGATCTTCACATCGATA | + |
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Preference number: 4 (lower is better) Translates to: PACPSPSQVEIPLLSSKDKVTSC*RIFTSI Trigger: TATCGATGTGAAGATCCTGCAGCAGCTGGTGACCTT...GTCTTTAGAGGAGAGGAGAGGGATTTCAACCTGACTAGGTGAAGGGCATGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR CAA 72 bp | AGGAGTGATGGGCTCGCCCTAAAGAAGGACTTTGCATaGTCTCTTCTCCTTAATGAGGCCCATGGACCAAAG | + |
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Preference number: 4 (lower is better) Translates to: RSDGLALKKDFA*SLLLNEAHGPK Trigger: CTTTGGTCCATGGGCCTCATTAAGGAGAAGAGACAATGCAAAGTCCTTCTTTAGGGCGAGCCCATCACTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR CAA 72 bp | CACTTGGTAGGCAGAGGCAGGCAGATCTTTGTGAGTTaGAAGCCAGCTTGGCCTACAATGTTGAGTTCTAGG | + |
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Preference number: 4 (lower is better) Translates to: HLVGRGRQIFVS*KPAWPTMLSSR Trigger: CCTAGAACTCAACATTGTAGGCCAAGCTGGCTTCAAACTCACAAAGATCTGCCTGCCTCTGCCTACCAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR CAA 72 bp | CTGAGGCAGGAGGATTGCCATGTGTTCCAGACAAGATaGAACTACGTAGTGAGTGCCATGCCAACACTGACT | + |
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Preference number: 4 (lower is better) Translates to: LRQEDCHVFQTR*NYVVSAMPTLT Trigger: AGTCAGTGTTGGCATGGCACTCACTACGTAGTTCAATCTTGTCTGGAACACATGGCAATCCTCCTGCCTCAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR CAA 72 bp | AAACAGATTGGGGAGCCTAAGTGGAGGCCTCTGAGTTaGTTACTAAGAGTACATCCTTACAGCCCTGGACAG | + |
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Preference number: 4 (lower is better) Translates to: KQIGEPKWRPLS*LLRVHPYSPGQ Trigger: CTGTCCAGGGCTGTAAGGATGTACTCTTAGTAACAAACTCAGAGGCCTCCACTTAGGCTCCCCAATCTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR CAA 72 bp | GTGTCTCAACTTCAGGCAAGCATCCTTGTGACCAAATaGTGGAAGGCTGGCCAGAATGAGGGAATAGTAAGC | + |
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Preference number: 4 (lower is better) Translates to: VSQLQASILVTK*WKAGQNEGIVS Trigger: GCTTACTATTCCCTCATTCTGGCCAGCCTTCCACAATTTGGTCACAAGGATGCTTGCCTGAAGTTGAGACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS-3UTR TCA 90 bp | TTATTTGTCCAGGTATTAACCACATCCTTTGTCTCCTACTCTGCCCATACCCTTTGTACTGACTGCTGGTaGGACTGCTGCAATGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: LFVQVLTTSFVSYSAHTLCTDCW*DCCNGS Trigger: CGAGCCATTGCAGCAGTCTCACCAGCAGTCAGTACA...AAGGGTATGGGCAGAGTAGGAGACAAAGGATGTGGTTAATACCTGGACAAATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR CAA 72 bp | GTCTTTAAAGAGCCAGAGGCTGTACTGCTGTTGGATTaGGTGGTTGCAAAACAACTATTGAGGCATTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: VFKEPEAVLLLD*VVAKQLLRHWS Trigger: GCTCCAATGCCTCAATAGTTGTTTTGCAACCACCAAATCCAACAGCAGTACAGCCTCTGGCTCTTTAAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR CAA 72 bp | GAGAGGGTCTTTAAAGAGCCAGAGGCTGTACTGCTGTaGGATTTGGTGGTTGCAAAACAACTATTGAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: ERVFKEPEAVLL*DLVVAKQLLRH Trigger: ATGCCTCAATAGTTGTTTTGCAACCACCAAATCCAACAGCAGTACAGCCTCTGGCTCTTTAAAGACCCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| 3UTR CAA 72 bp | CGGAGTGTTCAGATGAAATGCATACGCCTGCATACCTaGCTTATTTGTCCAGGTATTAACCACATCCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: RSVQMKCIRLHT*LICPGINHILC Trigger: ACAAAGGATGTGGTTAATACCTGGACAAATAAGCAAGGTATGCAGGCGTATGCATTTCATCTGAACACTCCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS GCA 90 bp | CTCGAAGCCCGCGGAGCAGTCCTTCAGGGATCTTCCTGCCCACCTTaGCCTCCACGTCTCGCAAGTCCGGCGTCTGGGACTCCGCGGTCC | + |
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Preference number: 5 (lower is better) Translates to: LEARGAVLQGSSCPP*PPRLASPASGTPRS Trigger: GGACCGCGGAGTCCCAGACGCCGGACTTGCGAGACGTGGAGGGCAAGGTGGGCAGGAAGATCCCTGAAGGACTGCTCCGCGGGCTTCGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS GCA 90 bp | CGCACTCGCCTCGAAGCCCGCGGAGCAGTCCTTCAGGGATCTTCCTaGCCACCTTGCCCTCCACGTCTCGCAAGTCCGGCGTCTGGGACT | + |
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Preference number: 5 (lower is better) Translates to: RTRLEARGAVLQGSS*PPCPPRLASPASGT Trigger: AGTCCCAGACGCCGGACTTGCGAGACGTGGAGGGCAAGGTGGGCAGGAAGATCCCTGAAGGACTGCTCCGCGGGCTTCGAGGCGAGTGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS GCA 90 bp | TGTCCAGCCGGTCAGTTGAACTGGTGTCTGGCAGGCTGTCCCAACTaGCCCGCCTTGAGCGTCCTGGGCTTCCCCCTGTCAGACTGTACT | + |
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Preference number: 5 (lower is better) Translates to: CPAGQLNWCLAGCPN*PALSVLGFPLSDCT Trigger: AGTACAGTCTGACAGGGGGAAGCCCAGGACGCTCAAGGCGGGGCAGTTGGGACAGCCTGCCAGACACCAGTTCAACTGACCGGCTGGACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS TCA 90 bp | TTGAGCGTCCTGGGCTTCCCCCTGTCAGACTGTACTGACTGCTGGTaGGACTGCTGCAATGGCTCGTCAGTGTACCCCGCTCCTCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: LSVLGFPLSDCTDCW*DCCNGSSVYPAPPA Trigger: TGCTGGAGGAGCGGGGTACACTGACGAGCCATTGCAGCAGTCTCACCAGCAGTCAGTACAGTCTGACAGGGGGAAGCCCAGGACGCTCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS CCA 90 bp | CCCTGGTTAGCATTGCCATCCTCTGATGGCTCAGGTGGTCCACACTaGAGCCCATCCCCCGGGAGCTTCCATGTGGCTGTTAAGCTCCCT | + |
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Preference number: 5 (lower is better) Translates to: PWLALPSSDGSGGPH*SPSPGSFHVAVKLP Trigger: AGGGAGCTTAACAGCCACATGGAAGCTCCCGGGGGATGGGCTCCAGTGTGGACCACCTGAGCCATCAGAGGATGGCAATGCTAACCAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS TCA 90 bp | CCAGTACCAATGAGCTTCAAAGCCCTGGTTAGCATTGCCATCCTCTaGTGGCTCAGGTGGTCCACACTGGAGCCCATCCCCCGGGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: PVPMSFKALVSIAIL*WLRWSTLEPIPREL Trigger: AAGCTCCCGGGGGATGGGCTCCAGTGTGGACCACCTGAGCCATCAGAGGATGGCAATGCTAACCAGGGCTTTGAAGCTCATTGGTACTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS GCA 90 bp | CATGTCCACCTCAGTCCTGGCCCTGTCCTCAGTGGGGATAACCTTTaGCCAGTCAATCTCAGGACAGGAAGGCCCAGGGAGTCCTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: HVHLSPGPVLSGDNL*PVNLRTGRPRESLF Trigger: GAACAAGGACTCCCTGGGCCTTCCTGTCCTGAGATTGACTGGGCAAAGGTTATCCCCACTGAGGACAGGGCCAGGACTGAGGTGGACATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS-3UTR CAA 90 bp | GGAAGGGGAGCGCTACAGATCAACTCAGAGTATGGACTGGGATACAGCACTCAACTCAGCGCCATGATCTaGTCCCCTAGGCCGTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GRGALQINSEYGLGYSTQLSAMI*SPRPWP Trigger: CGGCCACGGCCTAGGGGACAAGATCATGGCGCTGAG...TTGAGTGCTGTATCCCAGTCCATACTCTGAGTTGATCTGTAGCGCTCCCCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS-3UTR CAA 90 bp | GGAAGGGGAGCGCTACAGATCAACTCAGAGTATGGACTGGGATACAGCACTCAAAGGCCCAGGGAGTCCTaGTTCATCCAGCTCTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: GRGALQINSEYGLGYSTQRPRES*FIQLSG Trigger: CCCAGAGAGCTGGATGAACAAGGACTCCCTGGGCCT...TTGAGTGCTGTATCCCAGTCCATACTCTGAGTTGATCTGTAGCGCTCCCCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS-3UTR CAA 90 bp | GAGGATTGCCATGTGTTCCAGACAAGATTGAACTACGTAGTGAGTGCCATGCCATGTCCAGCCGGTCAGTaGAACTGGTGTCTGGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EDCHVFQTRLNYVVSAMPCPAGQ*NWCLAG Trigger: GCCTGCCAGACACCAGTTCAACTGACCGGCTGGACA...TGGCATGGCACTCACTACGTAGTTCAATCTTGTCTGGAACACATGGCAATCCTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS-3UTR CAA 90 bp | AGAGGCCTTACAGTCACACTGAGCTCCTCCTACTATGGCTTATTGATTACCTATATCTTCCTGCCCACCTaGCCCTCCACGTCTCGCAAG | + |
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Preference number: 5 (lower is better) Translates to: RGLTVTLSSSYYGLLITYIFLPT*PSTSRK Trigger: CTTGCGAGACGTGGAGGGCAAGGTGGGCAGGAAGAT...ATAGGTAATCAATAAGCCATAGTAGGAGGAGCTCAGTGTGACTGTAAGGCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS CCA 72 bp | TCCATCCTCAGCGCCATGATCTTGTCCCCTAGGCCGTaGCCGGTGCTGGGCGCCCCCGGGAGCAGCACGTCC | + |
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Preference number: 6 (lower is better) Translates to: SILSAMILSPRP*PVLGAPGSSTS Trigger: GGACGTGCTGCTCCCGGGGGCGCCCAGCACCGGCCACGGCCTAGGGGACAAGATCATGGCGCTGAGGATGGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS CAA 90 bp | CCTCGAAGCCCGCGGAGCAGTCCTTCAGGGATCTTCCTGCCCACCTaGCCCTCCACGTCTCGCAAGTCCGGCGTCTGGGACTCCGCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PRSPRSSPSGIFLPT*PSTSRKSGVWDSAV Trigger: GACCGCGGAGTCCCAGACGCCGGACTTGCGAGACGTGGAGGGCAAGGTGGGCAGGAAGATCCCTGAAGGACTGCTCCGCGGGCTTCGAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS GCA 72 bp | CTCGAAGCCCGCGGAGCAGTCCTTCAGGGATCTTCCTaGCCACCTTGCCCTCCACGTCTCGCAAGTCCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: LEARGAVLQGSS*PPCPPRLASPA Trigger: CGCCGGACTTGCGAGACGTGGAGGGCAAGGTGGGCAGGAAGATCCCTGAAGGACTGCTCCGCGGGCTTCGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS CAA 72 bp | CCGCGGAGCAGTCCTTCAGGGATCTTCCTGCCCACCTaGCCCTCCACGTCTCGCAAGTCCGGCGTCTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: PRSSPSGIFLPT*PSTSRKSGVWD Trigger: GTCCCAGACGCCGGACTTGCGAGACGTGGAGGGCAAGGTGGGCAGGAAGATCCCTGAAGGACTGCTCCGCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS GCA 72 bp | CGCGGAGCAGTCCTTCAGGGATCTTCCTGCCCACCTTaGCCTCCACGTCTCGCAAGTCCGGCGTCTGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: RGAVLQGSSCPP*PPRLASPASGT Trigger: AGTCCCAGACGCCGGACTTGCGAGACGTGGAGGGCAAGGTGGGCAGGAAGATCCCTGAAGGACTGCTCCGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS GCA 72 bp | GGTCAGTTGAACTGGTGTCTGGCAGGCTGTCCCAACTaGCCCGCCTTGAGCGTCCTGGGCTTCCCCCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: GQLNWCLAGCPN*PALSVLGFPLS Trigger: TGACAGGGGGAAGCCCAGGACGCTCAAGGCGGGGCAGTTGGGACAGCCTGCCAGACACCAGTTCAACTGACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS CAA 90 bp | GGTCAGTTGAACTGGTGTCTGGCAGGCTGTCCCAACTGCCCCGCCTaGAGCGTCCTGGGCTTCCCCCTGTCAGACTGTACTGACTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GQLNWCLAGCPNCPA*SVLGFPLSDCTDCW Trigger: CCAGCAGTCAGTACAGTCTGACAGGGGGAAGCCCAGGACGCTCAAGGCGGGGCAGTTGGGACAGCCTGCCAGACACCAGTTCAACTGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS CAA 72 bp | AACTGGTGTCTGGCAGGCTGTCCCAACTGCCCCGCCTaGAGCGTCCTGGGCTTCCCCCTGTCAGACTGTACT | + |
|
Preference number: 6 (lower is better) Translates to: NWCLAGCPNCPA*SVLGFPLSDCT Trigger: AGTACAGTCTGACAGGGGGAAGCCCAGGACGCTCAAGGCGGGGCAGTTGGGACAGCCTGCCAGACACCAGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS CCA 72 bp | GCATTGCCATCCTCTGATGGCTCAGGTGGTCCACACTaGAGCCCATCCCCCGGGAGCTTCCATGTGGCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: ALPSSDGSGGPH*SPSPGSFHVAV Trigger: AACAGCCACATGGAAGCTCCCGGGGGATGGGCTCCAGTGTGGACCACCTGAGCCATCAGAGGATGGCAATGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS TCA 72 bp | CTGGGCTTCCCCCTGTCAGACTGTACTGACTGCTGGTaGGACTGCTGCAATGGCTCGTCAGTGTACCCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: LGFPLSDCTDCW*DCCNGSSVYPA Trigger: AGCGGGGTACACTGACGAGCCATTGCAGCAGTCTCACCAGCAGTCAGTACAGTCTGACAGGGGGAAGCCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS TCA 72 bp | GAAGCTGCCAATAGAGACACTGTCCAGCCGGTCAGTTaGACTGGTGTCTGGCAGGCTGTCCCAACTGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: EAANRDTVQPVS*TGVWQAVPTAP Trigger: CGGGGCAGTTGGGACAGCCTGCCAGACACCAGTTCAACTGACCGGCTGGACAGTGTCTCTATTGGCAGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS GCA 72 bp | CTCAGTCCTGGCCCTGTCCTCAGTGGGGATAACCTTTaGCCAGTCAATCTCAGGACAGGAAGGCCCAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LSPGPVLSGDNL*PVNLRTGRPRE Trigger: CTCCCTGGGCCTTCCTGTCCTGAGATTGACTGGGCAAAGGTTATCCCCACTGAGGACAGGGCCAGGACTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS TCA 72 bp | CTTGAGCGTCCTGGGCTTCCCCCTGTCAGACTGTACTaGCTGCTGGTGAGACTGCTGCAATGGCTCGTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LERPGLPPVRLY*LLVRLLQWLVS Trigger: ACTGACGAGCCATTGCAGCAGTCTCACCAGCAGTCAGTACAGTCTGACAGGGGGAAGCCCAGGACGCTCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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| CDS TCA 72 bp | ATGAGCTTCAAAGCCCTGGTTAGCATTGCCATCCTCTaGTGGCTCAGGTGGTCCACACTGGAGCCCATCCCC | + |
|
Preference number: 6 (lower is better) Translates to: MSFKALVSIAIL*WLRWSTLEPIP Trigger: GGGGATGGGCTCCAGTGTGGACCACCTGAGCCATCAGAGGATGGCAATGCTAACCAGGGCTTTGAAGCTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030469.5 |
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