Pregenerated sensors for LTV1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019814Ensembl transcript IDs: ENSMUST00000019950.6
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGGAAAGGCCATCTGCTCTCAGGGCGAGCAGGAAATCCCAGCCATaGCAACTGCAGAGCTCATCTCCAGTCCTTTTGAAAGGGTCGTTT | + |
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Preference number: 1 (lower is better) Translates to: GERPSALRASRKSQP*QLQSSSPVLLKGSF Trigger: AAACGACCCTTTCAAAAGGACTGGAGATGAGCTCTGCAGTTGTCATGGCTGGGATTTCCTGCTCGCCCTGAGAGCAGATGGCCTTTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| 3UTR CCA 90 bp | TTCTCTACAGACGGCAAATTAAACCATGTAATTCCCAGGAAGGCGTaGAGAGGTTTCAAAGAAATAGCTGAGAACATCTGCAAACAACAA | + |
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Preference number: 1 (lower is better) Translates to: FSTDGKLNHVIPRKA*RGFKEIAENICKQQ Trigger: TTGTTGTTTGCAGATGTTCTCAGCTATTTCTTTGAAACCTCTCCACGCCTTCCTGGGAATTACATGGTTTAATTTGCCGTCTGTAGAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| 3UTR TCA 90 bp | CCATGTAATTCCCAGGAAGGCGTGGAGAGGTTTCAAAGAAATAGCTaGGAACATCTGCAAACAACAATTCTGACAACCATACAAATAAAT | + |
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Preference number: 1 (lower is better) Translates to: PCNSQEGVERFQRNS*EHLQTTILTTIQIN Trigger: ATTTATTTGTATGGTTGTCAGAATTGTTGTTTGCAGATGTTCTCAGCTATTTCTTTGAAACCTCTCCACGCCTTCCTGGGAATTACATGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| 3UTR CAA 90 bp | ATGACAACTGCAGAGCTCATCTCCAGTCCTTTTGAAAGGGTCGTTTaGTGTACCCGGGAAAATCAGCTTCTTACCCGTGGAATCTTGTCA | + |
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Preference number: 2 (lower is better) Translates to: MTTAELISSPFERVV*CTRENQLLTRGILS Trigger: TGACAAGATTCCACGGGTAAGAAGCTGATTTTCCCGGGTACACAAAACGACCCTTTCAAAAGGACTGGAGATGAGCTCTGCAGTTGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGAGCTCATCTCCAGTCCTTTTGAAAGGGTCGTTTTGTGTACCCGGGAAAATTCCCAGGAAGGCGTaGAGAGGTTTCAAAGAAATA | + |
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Preference number: 2 (lower is better) Translates to: LQSSSPVLLKGSFCVPGKIPRKA*RGFKEI Trigger: TATTTCTTTGAAACCTCTCCACGCCTTCCTGGGAAT...TTTCCCGGGTACACAAAACGACCCTTTCAAAAGGACTGGAGATGAGCTCTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| 3UTR CAA 90 bp | GTCGTTTTGTGTACCCGGGAAAATCAGCTTCTTACCCGTGGAATCTaGTCAGGAACACTCTTCTCACCACTGAGAATAAACTCAGCATTT | + |
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Preference number: 2 (lower is better) Translates to: VVLCTRENQLLTRGI*SGTLFSPLRINSAF Trigger: AAATGCTGAGTTTATTCTCAGTGGTGAGAAGAGTGTTCCTGACAAGATTCCACGGGTAAGAAGCTGATTTTCCCGGGTACACAAAACGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| 3UTR-3UTR TCA 90 bp | TCAAAACTGAGCTTAACCAGATCACTTCTCTACAGACGGCAAATTAAACCATGTAACCATACAAATAAATaGGCACACCAATTCCGTTCA | + |
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Preference number: 2 (lower is better) Translates to: SKLSLTRSLLYRRQIKPCNHTNK*AHQFRS Trigger: TGAACGGAATTGGTGTGCTCATTTATTTGTATGGTT...ACATGGTTTAATTTGCCGTCTGTAGAGAAGTGATCTGGTTAAGCTCAGTTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| 3UTR TCA 72 bp | CCATCTGCTCTCAGGGCGAGCAGGAAATCCCAGCCATaGCAACTGCAGAGCTCATCTCCAGTCCTTTTGAAA | + |
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Preference number: 3 (lower is better) Translates to: PSALRASRKSQP*QLQSSSPVLLK Trigger: TTTCAAAAGGACTGGAGATGAGCTCTGCAGTTGTCATGGCTGGGATTTCCTGCTCGCCCTGAGAGCAGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| 3UTR CCA 72 bp | CGTTTTGTGTACCCGGGAAAATCAGCTTCTTACCCGTaGAATCTTGTCAGGAACACTCTTCTCACCACTGAG | + |
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Preference number: 3 (lower is better) Translates to: RFVYPGKSASYP*NLVRNTLLTTE Trigger: CTCAGTGGTGAGAAGAGTGTTCCTGACAAGATTCCACGGGTAAGAAGCTGATTTTCCCGGGTACACAAAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| 3UTR CCA 72 bp | GACGGCAAATTAAACCATGTAATTCCCAGGAAGGCGTaGAGAGGTTTCAAAGAAATAGCTGAGAACATCTGC | + |
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Preference number: 3 (lower is better) Translates to: DGKLNHVIPRKA*RGFKEIAENIC Trigger: GCAGATGTTCTCAGCTATTTCTTTGAAACCTCTCCACGCCTTCCTGGGAATTACATGGTTTAATTTGCCGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR GCA 90 bp | AAACTCAGCATTTCAAAACTGAGCTTAACCAGATCACTTCTCTACAGACGGCAAGCTGGGGATAAGCTCTaGGGGCCCAGAGGGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: KLSISKLSLTRSLLYRRQAGDKL*GPRGLL Trigger: AAGGAGCCCTCTGGGCCCGCAGAGCTTATCCCCAGC...TTGCCGTCTGTAGAGAAGTGATCTGGTTAAGCTCAGTTTTGAAATGCTGAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR GCA 90 bp | TCAGCTTCTTACCCGTGGAATCTTGTCAGGAACACTCTTCTCACCACTGAGAATTTTTTCATGGCTTCCTaGGGTGAGCCGGGGGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: SASYPWNLVRNTLLTTENFFMAS*GEPGAD Trigger: ATCTGCCCCCGGCTCACCGCAGGAAGCCATGAAAAA...ATTCTCAGTGGTGAGAAGAGTGTTCCTGACAAGATTCCACGGGTAAGAAGCTGA 50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| 3UTR CAA 72 bp | GCAGAGCTCATCTCCAGTCCTTTTGAAAGGGTCGTTTaGTGTACCCGGGAAAATCAGCTTCTTACCCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: AELISSPFERVV*CTRENQLLTRG Trigger: TCCACGGGTAAGAAGCTGATTTTCCCGGGTACACAAAACGACCCTTTCAAAAGGACTGGAGATGAGCTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR TCA 90 bp | AAATCAGCTTCTTACCCGTGGAATCTTGTCAGGAACACTCTTCTCACCACTGAGCTCCGGTGGACCAGGTaGAAAGACACAGCTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: KSASYPWNLVRNTLLTTELRWTR*KDTAFF Trigger: GAAGAAAGCTGTGTCTTTTCACCTGGTCCACCGGAG...CTCAGTGGTGAGAAGAGTGTTCCTGACAAGATTCCACGGGTAAGAAGCTGATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR TCA 90 bp | CTGCAGAGCTCATCTCCAGTCCTTTTGAAAGGGTCGTTTTGTGTACCCGGGAAAGTTCATTTCTCCTCATaGCTGAGGAGGTCATGGAGT | + |
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Preference number: 4 (lower is better) Translates to: LQSSSPVLLKGSFCVPGKVHFSS*LRRSWS Trigger: ACTCCATGACCTCCTCAGTCATGAGGAGAAATGAAC...TTTCCCGGGTACACAAAACGACCCTTTCAAAAGGACTGGAGATGAGCTCTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR GCA 90 bp | AAATCAGCTTCTTACCCGTGGAATCTTGTCAGGAACACTCTTCTCACCACTGAGCCTCCTGCAGCCGATTaGTGTCCACTTGAATGGTAC | + |
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Preference number: 4 (lower is better) Translates to: KSASYPWNLVRNTLLTTEPPAAD*CPLEWY Trigger: GTACCATTCAAGTGGACAGCAATCGGCTGCAGGAGG...CTCAGTGGTGAGAAGAGTGTTCCTGACAAGATTCCACGGGTAAGAAGCTGATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR CCA 90 bp | GCCATGACAACTGCAGAGCTCATCTCCAGTCCTTTTGAAAGGGTCGTTTTGTGTATGTCTTCCCACTCATaGCCATCGTCTTCCTCAGAC | + |
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Preference number: 4 (lower is better) Translates to: AMTTAELISSPFERVVLCMSSHS*PSSSSD Trigger: GTCTGAGGAAGACGATGGCCATGAGTGGGAAGACAT...ACACAAAACGACCCTTTCAAAAGGACTGGAGATGAGCTCTGCAGTTGTCATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR GCA 90 bp | TCAGCTTCTTACCCGTGGAATCTTGTCAGGAACACTCTTCTCACCACTGAGAATTCATTCAAAACCTCCTaGAGCCGATTGCTGTCCACT | + |
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Preference number: 4 (lower is better) Translates to: SASYPWNLVRNTLLTTENSFKTS*SRLLST Trigger: AGTGGACAGCAATCGGCTGCAGGAGGTTTTGAATGA...ATTCTCAGTGGTGAGAAGAGTGTTCCTGACAAGATTCCACGGGTAAGAAGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR CCA 90 bp | AAATCAGCTTCTTACCCGTGGAATCTTGTCAGGAACACTCTTCTCACCACTGAGTCCGCTCCTCTTTTATaGCTTGCTTCCTGGCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: KSASYPWNLVRNTLLTTESAPLL*LASWLF Trigger: AAAGAGCCAGGAAGCAAGCCATAAAAGAGGAGCGGA...CTCAGTGGTGAGAAGAGTGTTCCTGACAAGATTCCACGGGTAAGAAGCTGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR CCA 90 bp | TGCTTCCAAACATTAGACAGTGTTGGAAAGAGCAACTTTCTAGGTTACAGTGAATGGAACGAGGCTGGGTaGACACTTTGGGTAGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: CFQTLDSVGKSNFLGYSEWNEAG*TLWVGH Trigger: GTGACCTACCCAAAGTGTCCACCCAGCCTCGTTCCA...TTCACTGTAACCTAGAAAGTTGCTCTTTCCAACACTGTCTAATGTTTGGAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR CCA 90 bp | AAACTCAGCATTTCAAAACTGAGCTTAACCAGATCACTTCTCTACAGACGGCAATCTTTGGAACGAGGCTaGGTGGACACTTTGGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: KLSISKLSLTRSLLYRRQSLERG*VDTLGR Trigger: CCTACCCAAAGTGTCCACCCAGCCTCGTTCCAAAGA...TTGCCGTCTGTAGAGAAGTGATCTGGTTAAGCTCAGTTTTGAAATGCTGAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR TCA 90 bp | GTAATTCCCAGGAAGGCGTGGAGAGGTTTCAAAGAAATAGCTGAGAACATCTGCGGATGCAAACACAGATaGAGGCAACTTAATTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: VIPRKAWRGFKEIAENICGCKHR*RQLNSS Trigger: ACTGGAATTAAGTTGCCTTCATCTGTGTTTGCATCC...GCAGATGTTCTCAGCTATTTCTTTGAAACCTCTCCACGCCTTCCTGGGAATTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR GCA 90 bp | CAGCTTCTTACCCGTGGAATCTTGTCAGGAACACTCTTCTCACCACTGAGAATATCCTCTTTTATGGCTTaGTTCCTGGCTCTTTTATCC | + |
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Preference number: 4 (lower is better) Translates to: QLLTRGILSGTLFSPLRISSFMA*FLALLS Trigger: GGATAAAAGAGCCAGGAAGCAAGCCATAAAAGAGGA...TATTCTCAGTGGTGAGAAGAGTGTTCCTGACAAGATTCCACGGGTAAGAAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR CCA 90 bp | TCAGCTTCTTACCCGTGGAATCTTGTCAGGAACACTCTTCTCACCACTGAGAATTGCTGTCCACTTGAATaGTACCTTCCAATTCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: SASYPWNLVRNTLLTTENCCPLE*YLPILH Trigger: ATGCAGAATTGGAAGGTACCATTCAAGTGGACAGCA...ATTCTCAGTGGTGAGAAGAGTGTTCCTGACAAGATTCCACGGGTAAGAAGCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR CCA 90 bp | AAATCAGCTTCTTACCCGTGGAATCTTGTCAGGAACACTCTTCTCACCACTGAGTTATGGCTTGCTTCCTaGCTCTTTTATCCTCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: KSASYPWNLVRNTLLTTELWLAS*LFYPLW Trigger: CCAAAGAGGATAAAAGAGCCAGGAAGCAAGCCATAA...CTCAGTGGTGAGAAGAGTGTTCCTGACAAGATTCCACGGGTAAGAAGCTGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR GCA 90 bp | GTAATTCCCAGGAAGGCGTGGAGAGGTTTCAAAGAAATAGCTGAGAACATCTGCAATTGGAGTATGTACTaGAAATGGATTCACAATCCC | + |
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Preference number: 4 (lower is better) Translates to: VIPRKAWRGFKEIAENICNWSMY*KWIHNP Trigger: GGGATTGTGAATCCATTTGCAGTACATACTCCAATT...GCAGATGTTCTCAGCTATTTCTTTGAAACCTCTCCACGCCTTCCTGGGAATTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR CCA 90 bp | AAATCAGCTTCTTACCCGTGGAATCTTGTCAGGAACACTCTTCTCACCACTGAGAGTATGTACTGCAAATaGATTCACAATCCCACTTCT | + |
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Preference number: 4 (lower is better) Translates to: KSASYPWNLVRNTLLTTESMYCK*IHNPTS Trigger: AGAAGTGGGATTGTGAATCCATTTGCAGTACATACT...CTCAGTGGTGAGAAGAGTGTTCCTGACAAGATTCCACGGGTAAGAAGCTGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR CCA 90 bp | CAGCTTCTTACCCGTGGAATCTTGTCAGGAACACTCTTCTCACCACTGAGAATAGGTGGTTGTATAAATTaGAGTATGTACTGCAAATGG | + |
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Preference number: 4 (lower is better) Translates to: QLLTRGILSGTLFSPLRIGGCIN*SMYCKW Trigger: CCATTTGCAGTACATACTCCAATTTATACAACCACC...TATTCTCAGTGGTGAGAAGAGTGTTCCTGACAAGATTCCACGGGTAAGAAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR CCA 90 bp | GGAAAATCAGCTTCTTACCCGTGGAATCTTGTCAGGAACACTCTTCTCACCACTTTGATGAGCTGTGGGTaGTTGTATAAATTGGAGTAT | + |
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Preference number: 4 (lower is better) Translates to: GKSASYPWNLVRNTLLTTLMSCG*LYKLEY Trigger: ATACTCCAATTTATACAACCACCCACAGCTCATCAA...AGTGGTGAGAAGAGTGTTCCTGACAAGATTCCACGGGTAAGAAGCTGATTTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR TCA 90 bp | GACAGTGTTGGAAAGAGCAACTTTCTAGGTTACAGTGAAGTAAGTTTTCTTGATATTTCTCCTCATGACTaGGGAGGTCATGGAGTACTC | + |
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Preference number: 4 (lower is better) Translates to: DSVGKSNFLGYSEVSFLDISPHD*GGHGVL Trigger: GAGTACTCCATGACCTCCTCAGTCATGAGGAGAAAT...ATCAAGAAAACTTACTTCACTGTAACCTAGAAAGTTGCTCTTTCCAACACTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR TCA 90 bp | GACAGTGTTGGAAAGAGCAACTTTCTAGGTTACAGTGAAGTAAGTTTTCTTGATGTAGGTCACTGCCATTaGTCATCTGCATCCGTTCAA | + |
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Preference number: 4 (lower is better) Translates to: DSVGKSNFLGYSEVSFLDVGHCH*SSASVQ Trigger: TTGAACGGATGCAGATGATCAATGGCAGTGACCTAC...ATCAAGAAAACTTACTTCACTGTAACCTAGAAAGTTGCTCTTTCCAACACTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR GCA 90 bp | TCAAAACTGAGCTTAACCAGATCACTTCTCTACAGACGGCAAATTAAACCATGTTCTTCCCAAAACAGGTaGTTTTTCATGGCTTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SKLSLTRSLLYRRQIKPCSSQNR*FFMASC Trigger: GCAGGAAGCCATGAAAAAGCACCTGTTTTGGGAAGA...ACATGGTTTAATTTGCCGTCTGTAGAGAAGTGATCTGGTTAAGCTCAGTTTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR CCA 90 bp | TGCTTCCAAACATTAGACAGTGTTGGAAAGAGCAACTTTCTAGGTTACAGTGAAGTCTTAGACGACAGGTaGATTTGTTTGGGCTTTGGT | + |
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Preference number: 4 (lower is better) Translates to: CFQTLDSVGKSNFLGYSEVLDDR*ICLGFG Trigger: ACCAAAGCCCAAACAAATCCACCTGTCGTCTAAGAC...TTCACTGTAACCTAGAAAGTTGCTCTTTCCAACACTGTCTAATGTTTGGAAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR TCA 90 bp | GACAGTGTTGGAAAGAGCAACTTTCTAGGTTACAGTGAAGTAAGTTTTCTTGATCGATTGCTGTCCACTTaGATGGTACCTTCCAATTCT | + |
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Preference number: 4 (lower is better) Translates to: DSVGKSNFLGYSEVSFLDRLLST*MVPSNS Trigger: AGAATTGGAAGGTACCATTCAAGTGGACAGCAATCG...ATCAAGAAAACTTACTTCACTGTAACCTAGAAAGTTGCTCTTTCCAACACTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR GCA 90 bp | GACAGTGTTGGAAAGAGCAACTTTCTAGGTTACAGTGAAGTAAGTTTTCTTGATGGTACCTTCCAATTCTaGATTATCCAGAGCTCCAAT | + |
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Preference number: 4 (lower is better) Translates to: DSVGKSNFLGYSEVSFLDGTFQF*IIQSSN Trigger: ATTGGAGCTCTGGATAATGCAGAATTGGAAGGTACC...ATCAAGAAAACTTACTTCACTGTAACCTAGAAAGTTGCTCTTTCCAACACTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR CCA 90 bp | GACAGTGTTGGAAAGAGCAACTTTCTAGGTTACAGTGAAGTAAGTTTTCTTGATATCAAGCTCATTTGTTaGCAGATCTTGATCCTCAAA | + |
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Preference number: 4 (lower is better) Translates to: DSVGKSNFLGYSEVSFLDIKLIC*QILILK Trigger: TTTGAGGATCAAGATCTGCCAACAAATGAGCTTGAT...ATCAAGAAAACTTACTTCACTGTAACCTAGAAAGTTGCTCTTTCCAACACTGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CCA 90 bp | CGTCTTTCCTCGTCATTGACCTTTTGTGTAGGCAAGAGAACCCTCTaGGGTGCAGTTTCATCTGCGGCTAAAGGATCTCGCTGGCTCCGG | + |
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Preference number: 5 (lower is better) Translates to: RLSSSLTFCVGKRTL*GAVSSAAKGSRWLR Trigger: CCGGAGCCAGCGAGATCCTTTAGCCGCAGATGAAACTGCACCCCAGAGGGTTCTCTTGCCTACACAAAAGGTCAATGACGAGGAAAGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS GCA 90 bp | CGAGGCTGGGTGGACACTTTGGGTAGGTCACTGCCATTGATCATCTaGATCCGTTCAACCTGCTTTGCTGTGAGGCCTTTCTTAGGTAAG | + |
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Preference number: 5 (lower is better) Translates to: RGWVDTLGRSLPLII*IRSTCFAVRPFLGK Trigger: CTTACCTAAGAAAGGCCTCACAGCAAAGCAGGTTGAACGGATGCAGATGATCAATGGCAGTGACCTACCCAAAGTGTCCACCCAGCCTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR CAA 90 bp | CAGCTTCTTACCCGTGGAATCTTGTCAGGAACACTCTTCTCACCACTGAGAATACAGGGGTCTTCTGTCTaGTCGCAGAGGGGTGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: QLLTRGILSGTLFSPLRIQGSSV*SQRGVA Trigger: TGCCACACCCCTCTGCGACAAGACAGAAGACCCCTG...TATTCTCAGTGGTGAGAAGAGTGTTCCTGACAAGATTCCACGGGTAAGAAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR CAA 90 bp | GTAATTCCCAGGAAGGCGTGGAGAGGTTTCAAAGAAATAGCTGAGAACATCTGCGGTAGGTCACTGCCATaGATCATCTGCATCCGTTCA | + |
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Preference number: 5 (lower is better) Translates to: VIPRKAWRGFKEIAENICGRSLP*IICIRS Trigger: TGAACGGATGCAGATGATCAATGGCAGTGACCTACC...GCAGATGTTCTCAGCTATTTCTTTGAAACCTCTCCACGCCTTCCTGGGAATTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR CAA 90 bp | CTGCAGAGCTCATCTCCAGTCCTTTTGAAAGGGTCGTTTTGTGTACCCGGGAAAACTCATCAAGCTCATTaGTTGGCAGATCTTGATCCT | + |
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Preference number: 5 (lower is better) Translates to: LQSSSPVLLKGSFCVPGKTHQAH*LADLDP Trigger: AGGATCAAGATCTGCCAACAAATGAGCTTGATGAGT...TTTCCCGGGTACACAAAACGACCCTTTCAAAAGGACTGGAGATGAGCTCTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR CAA 90 bp | TCAAAACTGAGCTTAACCAGATCACTTCTCTACAGACGGCAAATTAAACCATGTGGCTGGGTGGACACTTaGGGTAGGTCACTGCCATTG | + |
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Preference number: 5 (lower is better) Translates to: SKLSLTRSLLYRRQIKPCGWVDT*GRSLPL Trigger: CAATGGCAGTGACCTACCCAAAGTGTCCACCCAGCC...ACATGGTTTAATTTGCCGTCTGTAGAGAAGTGATCTGGTTAAGCTCAGTTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS GCA 90 bp | ACTTTGGGTAGGTCACTGCCATTGATCATCTGCATCCGTTCAACCTaGTTTGCTGTGAGGCCTTTCTTAGGTAAGACATTGAGAGGTATT | + |
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Preference number: 5 (lower is better) Translates to: TLGRSLPLIICIRST*FAVRPFLGKTLRGI Trigger: AATACCTCTCAATGTCTTACCTAAGAAAGGCCTCACAGCAAAGCAGGTTGAACGGATGCAGATGATCAATGGCAGTGACCTACCCAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR CAA 90 bp | AAATCAGCTTCTTACCCGTGGAATCTTGTCAGGAACACTCTTCTCACCACTGAGCTCCTCTTTTATGGCTaGCTTCCTGGCTCTTTTATC | + |
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Preference number: 5 (lower is better) Translates to: KSASYPWNLVRNTLLTTELLFYG*LPGSFI Trigger: GATAAAAGAGCCAGGAAGCAAGCCATAAAAGAGGAG...CTCAGTGGTGAGAAGAGTGTTCCTGACAAGATTCCACGGGTAAGAAGCTGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR CAA 90 bp | TCAGCTTCTTACCCGTGGAATCTTGTCAGGAACACTCTTCTCACCACTGAGAATCATCAAGCTCATTTGTaGGCAGATCTTGATCCTCAA | + |
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Preference number: 5 (lower is better) Translates to: SASYPWNLVRNTLLTTENHQAHL*ADLDPQ Trigger: TTGAGGATCAAGATCTGCCAACAAATGAGCTTGATG...ATTCTCAGTGGTGAGAAGAGTGTTCCTGACAAGATTCCACGGGTAAGAAGCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS GCA 90 bp | CTCCTGCAGCCGATTGCTGTCCACTTGAATGGTACCTTCCAATTCTaGATTATCCAGAGCTCCAATTTCAACATCATCATACTGTTCATA | + |
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Preference number: 5 (lower is better) Translates to: LLQPIAVHLNGTFQF*IIQSSNFNIIILFI Trigger: TATGAACAGTATGATGATGTTGAAATTGGAGCTCTGGATAATGCAGAATTGGAAGGTACCATTCAAGTGGACAGCAATCGGCTGCAGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CCA 90 bp | AGTAGTCATTCAAAACCTCCTGCAGCCGATTGCTGTCCACTTGAATaGTACCTTCCAATTCTGCATTATCCAGAGCTCCAATTTCAACAT | + |
|
Preference number: 5 (lower is better) Translates to: SSHSKPPAADCCPLE*YLPILHYPELQFQH Trigger: ATGTTGAAATTGGAGCTCTGGATAATGCAGAATTGGAAGGTACCATTCAAGTGGACAGCAATCGGCTGCAGGAGGTTTTGAATGACTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR CAA 90 bp | GTAATTCCCAGGAAGGCGTGGAGAGGTTTCAAAGAAATAGCTGAGAACATCTGCGAAACTGGAGCTGCTTaGTTTAACAATCCAACATCT | + |
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Preference number: 5 (lower is better) Translates to: VIPRKAWRGFKEIAENICETGAA*FNNPTS Trigger: AGATGTTGGATTGTTAAACAAAGCAGCTCCAGTTTC...GCAGATGTTCTCAGCTATTTCTTTGAAACCTCTCCACGCCTTCCTGGGAATTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR CAA 90 bp | AAACTCAGCATTTCAAAACTGAGCTTAACCAGATCACTTCTCTACAGACGGCAACCGATTGCTGTCCACTaGAATGGTACCTTCCAATTC | + |
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Preference number: 5 (lower is better) Translates to: KLSISKLSLTRSLLYRRQPIAVH*NGTFQF Trigger: GAATTGGAAGGTACCATTCAAGTGGACAGCAATCGG...TTGCCGTCTGTAGAGAAGTGATCTGGTTAAGCTCAGTTTTGAAATGCTGAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR CAA 90 bp | TCAGCTTCTTACCCGTGGAATCTTGTCAGGAACACTCTTCTCACCACTGAGAATTTCTTAGGTAAGACATaGAGAGGTATTCCGGTCTTA | + |
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Preference number: 5 (lower is better) Translates to: SASYPWNLVRNTLLTTENFLGKT*RGIPVL Trigger: TAAGACCGGAATACCTCTCAATGTCTTACCTAAGAA...ATTCTCAGTGGTGAGAAGAGTGTTCCTGACAAGATTCCACGGGTAAGAAGCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR CAA 90 bp | AAACTCAGCATTTCAAAACTGAGCTTAACCAGATCACTTCTCTACAGACGGCAATCTGTGAAACGGCTTTaGGTTTCCTCTTCCCAAAAC | + |
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Preference number: 5 (lower is better) Translates to: KLSISKLSLTRSLLYRRQSVKRL*VSSSQN Trigger: GTTTTGGGAAGAGGAAACCAAAAGCCGTTTCACAGA...TTGCCGTCTGTAGAGAAGTGATCTGGTTAAGCTCAGTTTTGAAATGCTGAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR CAA 90 bp | TGCTTCCAAACATTAGACAGTGTTGGAAAGAGCAACTTTCTAGGTTACAGTGAACAATCCCACTTCTCTTaGGCTTCCTCAAGAACTACA | + |
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Preference number: 5 (lower is better) Translates to: CFQTLDSVGKSNFLGYSEQSHFS*ASSRTT Trigger: TGTAGTTCTTGAGGAAGCCAAAGAGAAGTGGGATTG...TTCACTGTAACCTAGAAAGTTGCTCTTTCCAACACTGTCTAATGTTTGGAAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR CAA 90 bp | GACAGTGTTGGAAAGAGCAACTTTCTAGGTTACAGTGAAGTAAGTTTTCTTGATGGCTTTGGTTCATATTaGATGAGCTGTGGGTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: DSVGKSNFLGYSEVSFLDGFGSY*MSCGWL Trigger: CAACCACCCACAGCTCATCAAATATGAACCAAAGCC...ATCAAGAAAACTTACTTCACTGTAACCTAGAAAGTTGCTCTTTCCAACACTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS-3UTR CAA 90 bp | ACCACTGAGAATAAACTCAGCATTTCAAAACTGAGCTTAACCAGATCACTTCTCAGACGACAGGTGGATTaGTTTGGGCTTTGGTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: TTENKLSISKLSLTRSLLRRQVD*FGLWFI Trigger: TATGAACCAAAGCCCAAACAAATCCACCTGTCGTCT...GAGAAGTGATCTGGTTAAGCTCAGTTTTGAAATGCTGAGTTTATTCTCAGTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CCA 90 bp | AGGTGGATTTGTTTGGGCTTTGGTTCATATTTGATGAGCTGTGGGTaGTTGTATAAATTGGAGTATGTACTGCAAATGGATTCACAATCC | + |
|
Preference number: 5 (lower is better) Translates to: RWICLGFGSYLMSCG*LYKLEYVLQMDSQS Trigger: GGATTGTGAATCCATTTGCAGTACATACTCCAATTTATACAACCACCCACAGCTCATCAAATATGAACCAAAGCCCAAACAAATCCACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CAA 72 bp | ATTCCAGTGCTTGAGTATACGCAGGGGTCTTCTGTCTaGTCGCAGAGGGGTGTGGCAAAGGAGGTGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: IPVLEYTQGSSV*SQRGVAKEVLG Trigger: CCCCAGCACCTCCTTTGCCACACCCCTCTGCGACAAGACAGAAGACCCCTGCGTATACTCAAGCACTGGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CAA 90 bp | GCCGTACTTCCTCTGCTCAGCCCGTCTTTCCTCGTCATTGACCTTTaGTGTAGGCAAGAGAACCCTCTGGGGTGCAGTTTCATCTGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: AVLPLLSPSFLVIDL*CRQENPLGCSFICG Trigger: GCCGCAGATGAAACTGCACCCCAGAGGGTTCTCTTGCCTACACAAAAGGTCAATGACGAGGAAAGACGGGCTGAGCAGAGGAAGTACGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CAA 72 bp | CCTCTGCTCAGCCCGTCTTTCCTCGTCATTGACCTTTaGTGTAGGCAAGAGAACCCTCTGGGGTGCAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PLLSPSFLVIDL*CRQENPLGCSF Trigger: GAAACTGCACCCCAGAGGGTTCTCTTGCCTACACAAAAGGTCAATGACGAGGAAAGACGGGCTGAGCAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CAA 72 bp | CCGTACTTCCTCTGCTCAGCCCGTCTTTCCTCGTCATaGACCTTTTGTGTAGGCAAGAGAACCCTCTGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PYFLCSARLSSS*TFCVGKRTLWG Trigger: ACCCCAGAGGGTTCTCTTGCCTACACAAAAGGTCAATGACGAGGAAAGACGGGCTGAGCAGAGGAAGTACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CAA 90 bp | TCTTTGGAACGAGGCTGGGTGGACACTTTGGGTAGGTCACTGCCATaGATCATCTGCATCCGTTCAACCTGCTTTGCTGTGAGGCCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SLERGWVDTLGRSLP*IICIRSTCFAVRPF Trigger: GAAAGGCCTCACAGCAAAGCAGGTTGAACGGATGCAGATGATCAATGGCAGTGACCTACCCAAAGTGTCCACCCAGCCTCGTTCCAAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS GCA 72 bp | GTGGACACTTTGGGTAGGTCACTGCCATTGATCATCTaGATCCGTTCAACCTGCTTTGCTGTGAGGCCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: VDTLGRSLPLII*IRSTCFAVRPF Trigger: GAAAGGCCTCACAGCAAAGCAGGTTGAACGGATGCAGATGATCAATGGCAGTGACCTACCCAAAGTGTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CCA 72 bp | TCGTCATTGACCTTTTGTGTAGGCAAGAGAACCCTCTaGGGTGCAGTTTCATCTGCGGCTAAAGGATCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: SSLTFCVGKRTL*GAVSSAAKGSR Trigger: GCGAGATCCTTTAGCCGCAGATGAAACTGCACCCCAGAGGGTTCTCTTGCCTACACAAAAGGTCAATGACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CAA 72 bp | TTGGTCTCATCTTTGGAACGAGGCTGGGTGGACACTTaGGGTAGGTCACTGCCATTGATCATCTGCATCCGT | + |
|
Preference number: 6 (lower is better) Translates to: LVSSLERGWVDT*GRSLPLIICIR Trigger: ACGGATGCAGATGATCAATGGCAGTGACCTACCCAAAGTGTCCACCCAGCCTCGTTCCAAAGATGAGACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CAA 90 bp | TTATCCTCTTTGGTCTCATCTTTGGAACGAGGCTGGGTGGACACTTaGGGTAGGTCACTGCCATTGATCATCTGCATCCGTTCAACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LSSLVSSLERGWVDT*GRSLPLIICIRSTC Trigger: GCAGGTTGAACGGATGCAGATGATCAATGGCAGTGACCTACCCAAAGTGTCCACCCAGCCTCGTTCCAAAGATGAGACCAAAGAGGATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CAA 90 bp | TTCCGCTCCTCTTTTATGGCTTGCTTCCTGGCTCTTTTATCCTCTTaGGTCTCATCTTTGGAACGAGGCTGGGTGGACACTTTGGGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: FRSSFMACFLALLSS*VSSLERGWVDTLGR Trigger: CCTACCCAAAGTGTCCACCCAGCCTCGTTCCAAAGATGAGACCAAAGAGGATAAAAGAGCCAGGAAGCAAGCCATAAAAGAGGAGCGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CCA 72 bp | CTTTTATCCTCTTTGGTCTCATCTTTGGAACGAGGCTaGGTGGACACTTTGGGTAGGTCACTGCCATTGATC | + |
|
Preference number: 6 (lower is better) Translates to: LLSSLVSSLERG*VDTLGRSLPLI Trigger: GATCAATGGCAGTGACCTACCCAAAGTGTCCACCCAGCCTCGTTCCAAAGATGAGACCAAAGAGGATAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CAA 90 bp | ATCCGTTCAACCTGCTTTGCTGTGAGGCCTTTCTTAGGTAAGACATaGAGAGGTATTCCGGTCTTAGACGACAGGTGGATTTGTTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: IRSTCFAVRPFLGKT*RGIPVLDDRWICLG Trigger: GCCCAAACAAATCCACCTGTCGTCTAAGACCGGAATACCTCTCAATGTCTTACCTAAGAAAGGCCTCACAGCAAAGCAGGTTGAACGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS GCA 72 bp | AGGTCACTGCCATTGATCATCTGCATCCGTTCAACCTaGTTTGCTGTGAGGCCTTTCTTAGGTAAGACATTG | + |
|
Preference number: 6 (lower is better) Translates to: RSLPLIICIRST*FAVRPFLGKTL Trigger: CAATGTCTTACCTAAGAAAGGCCTCACAGCAAAGCAGGTTGAACGGATGCAGATGATCAATGGCAGTGACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CCA 72 bp | TCAAAACCTCCTGCAGCCGATTGCTGTCCACTTGAATaGTACCTTCCAATTCTGCATTATCCAGAGCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: SKPPAADCCPLE*YLPILHYPELQ Trigger: TTGGAGCTCTGGATAATGCAGAATTGGAAGGTACCATTCAAGTGGACAGCAATCGGCTGCAGGAGGTTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CAA 72 bp | GTCATTCAAAACCTCCTGCAGCCGATTGCTGTCCACTaGAATGGTACCTTCCAATTCTGCATTATCCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: VIQNLLQPIAVH*NGTFQFCIIQS Trigger: GCTCTGGATAATGCAGAATTGGAAGGTACCATTCAAGTGGACAGCAATCGGCTGCAGGAGGTTTTGAATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CAA 72 bp | AGAGGTATTCCGGTCTTAGACGACAGGTGGATTTGTTaGGGCTTTGGTTCATATTTGATGAGCTGTGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RGIPVLDDRWIC*GFGSYLMSCGW Trigger: CCACCCACAGCTCATCAAATATGAACCAAAGCCCAAACAAATCCACCTGTCGTCTAAGACCGGAATACCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CAA 72 bp | ACCTGCTTTGCTGTGAGGCCTTTCTTAGGTAAGACATaGAGAGGTATTCCGGTCTTAGACGACAGGTGGATT | + |
|
Preference number: 6 (lower is better) Translates to: TCFAVRPFLGKT*RGIPVLDDRWI Trigger: AATCCACCTGTCGTCTAAGACCGGAATACCTCTCAATGTCTTACCTAAGAAAGGCCTCACAGCAAAGCAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS GCA 72 bp | CCTTGTAGTAGTCATTCAAAACCTCCTGCAGCCGATTaGTGTCCACTTGAATGGTACCTTCCAATTCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: PCSSHSKPPAAD*CPLEWYLPILH Trigger: ATGCAGAATTGGAAGGTACCATTCAAGTGGACAGCAATCGGCTGCAGGAGGTTTTGAATGACTACTACAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS GCA 72 bp | TCAACTCTTCGTTCCTTCCGCTCCTCTTTTATGGCTTaGTTCCTGGCTCTTTTATCCTCTTTGGTCTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: STLRSFRSSFMA*FLALLSSLVSS Trigger: AGATGAGACCAAAGAGGATAAAAGAGCCAGGAAGCAAGCCATAAAAGAGGAGCGGAAGGAACGAAGAGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CAA 72 bp | ACTGAGGAGGTCATGGAGTACTCTGTGAAACGGCTTTaGGTTTCCTCTTCCCAAAACAGGTGCTTTTTCATG | + |
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Preference number: 6 (lower is better) Translates to: TEEVMEYSVKRL*VSSSQNRCFFM Trigger: CATGAAAAAGCACCTGTTTTGGGAAGAGGAAACCAAAAGCCGTTTCACAGAGTACTCCATGACCTCCTCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CAA 90 bp | CTTGTAGTAGTCATTCAAAACCTCCTGCAGCCGATTGCTGTCCACTaGAATGGTACCTTCCAATTCTGCATTATCCAGAGCTCCAATTTC | + |
|
Preference number: 6 (lower is better) Translates to: LVVVIQNLLQPIAVH*NGTFQFCIIQSSNF Trigger: GAAATTGGAGCTCTGGATAATGCAGAATTGGAAGGTACCATTCAAGTGGACAGCAATCGGCTGCAGGAGGTTTTGAATGACTACTACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CAA 72 bp | ATTGAGAGGTATTCCGGTCTTAGACGACAGGTGGATTaGTTTGGGCTTTGGTTCATATTTGATGAGCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: IERYSGLRRQVD*FGLWFIFDELW Trigger: CCACAGCTCATCAAATATGAACCAAAGCCCAAACAAATCCACCTGTCGTCTAAGACCGGAATACCTCTCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CAA 90 bp | CCGGTCTTAGACGACAGGTGGATTTGTTTGGGCTTTGGTTCATATTaGATGAGCTGTGGGTGGTTGTATAAATTGGAGTATGTACTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: PVLDDRWICLGFGSY*MSCGWLYKLEYVLQ Trigger: TTGCAGTACATACTCCAATTTATACAACCACCCACAGCTCATCAAATATGAACCAAAGCCCAAACAAATCCACCTGTCGTCTAAGACCGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CAA 72 bp | TGGTCTCTTCCTTTTCAGACTCATCAAGCTCATTTGTaGGCAGATCTTGATCCTCAAAAGGCTCAAGAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: WSLPFQTHQAHL*ADLDPQKAQEY Trigger: GTACTCTTGAGCCTTTTGAGGATCAAGATCTGCCAACAAATGAGCTTGATGAGTCTGAAAAGGAAGAGACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CAA 90 bp | AAGACATTGAGAGGTATTCCGGTCTTAGACGACAGGTGGATTTGTTaGGGCTTTGGTTCATATTTGATGAGCTGTGGGTGGTTGTATAAA | + |
|
Preference number: 6 (lower is better) Translates to: KTLRGIPVLDDRWIC*GFGSYLMSCGWLYK Trigger: TTTATACAACCACCCACAGCTCATCAAATATGAACCAAAGCCCAAACAAATCCACCTGTCGTCTAAGACCGGAATACCTCTCAATGTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS GCA 72 bp | CCGATTGCTGTCCACTTGAATGGTACCTTCCAATTCTaGATTATCCAGAGCTCCAATTTCAACATCATCATA | + |
|
Preference number: 6 (lower is better) Translates to: PIAVHLNGTFQF*IIQSSNFNIII Trigger: TATGATGATGTTGAAATTGGAGCTCTGGATAATGCAGAATTGGAAGGTACCATTCAAGTGGACAGCAATCGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CAA 72 bp | TATGTACTGCAAATGGATTCACAATCCCACTTCTCTTaGGCTTCCTCAAGAACTACAGTAATGGTCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: YVLQMDSQSHFS*ASSRTTVMVSS Trigger: GGAAGAGACCATTACTGTAGTTCTTGAGGAAGCCAAAGAGAAGTGGGATTGTGAATCCATTTGCAGTACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CAA 72 bp | GACGACAGGTGGATTTGTTTGGGCTTTGGTTCATATTaGATGAGCTGTGGGTGGTTGTATAAATTGGAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: DDRWICLGFGSY*MSCGWLYKLEY Trigger: ATACTCCAATTTATACAACCACCCACAGCTCATCAAATATGAACCAAAGCCCAAACAAATCCACCTGTCGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CAA 90 bp | TGGATTTGTTTGGGCTTTGGTTCATATTTGATGAGCTGTGGGTGGTaGTATAAATTGGAGTATGTACTGCAAATGGATTCACAATCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: WICLGFGSYLMSCGW*YKLEYVLQMDSQSH Trigger: GTGGGATTGTGAATCCATTTGCAGTACATACTCCAATTTATACAACCACCCACAGCTCATCAAATATGAACCAAAGCCCAAACAAATCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CAA 72 bp | GGTTCATATTTGATGAGCTGTGGGTGGTTGTATAAATaGGAGTATGTACTGCAAATGGATTCACAATCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GSYLMSCGWLYK*EYVLQMDSQSH Trigger: GTGGGATTGTGAATCCATTTGCAGTACATACTCCAATTTATACAACCACCCACAGCTCATCAAATATGAACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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| CDS CCA 72 bp | TGTTTGGGCTTTGGTTCATATTTGATGAGCTGTGGGTaGTTGTATAAATTGGAGTATGTACTGCAAATGGAT | + |
|
Preference number: 6 (lower is better) Translates to: CLGFGSYLMSCG*LYKLEYVLQMD Trigger: ATCCATTTGCAGTACATACTCCAATTTATACAACCACCCACAGCTCATCAAATATGAACCAAAGCCCAAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019950.6 |
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