Pregenerated sensors for LTO1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031072Ensembl transcript IDs: ENSMUST00000033388.12, ENSMUST00000105895.2, ENSMUST00000128057.8, ENSMUST00000141737.2, ENSMUST00000207453.2
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCACGAGCCTGGCAGGCAGGTGGGCGGTCTGCCTCCAGGGATCCTaGGACCCTGATGGCGATCGTCCTGTCATGCTGGGCCCTTCATTT | + |
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Preference number: 1 (lower is better) Translates to: CTSLAGRWAVCLQGS*DPDGDRPVMLGPSF Trigger: AAATGAAGGGCCCAGCATGACAGGACGATCGCCATCAGGGTCCCAGGATCCCTGGAGGCAGACCGCCCACCTGCCTGCCAGGCTCGTGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
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| 3UTR CCA 90 bp | CATGTTGGAGGCAGAGGCACTATGTGGTACTTCAGGGCATGGACCTaGGGTGGGGGCCAGCTCTGCCACCAGGCCCTTAGACTAGATGGG | + |
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Preference number: 1 (lower is better) Translates to: HVGGRGTMWYFRAWT*GGGQLCHQALRLDG Trigger: CCCATCTAGTCTAAGGGCCTGGTGGCAGAGCTGGCCCCCACCCCAGGTCCATGCCCTGAAGTACCACATAGTGCCTCTGCCTCCAACATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
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| 3UTR CCA 90 bp | GTGGTGTTGGCAATGACAGCGCATGTTGGAGGCAGAGGCACTATGTaGTACTTCAGGGCATGGACCTGGGGTGGGGGCCAGCTCTGCCAC | + |
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Preference number: 1 (lower is better) Translates to: VVLAMTAHVGGRGTM*YFRAWTWGGGQLCH Trigger: GTGGCAGAGCTGGCCCCCACCCCAGGTCCATGCCCTGAAGTACCACATAGTGCCTCTGCCTCCAACATGCGCTGTCATTGCCAACACCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
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| 3UTR TCA 90 bp | AGCCATAAGGTATCCTCCACCTCTGGGGCTGCCAGAGGGATGGAGTaGAACAAGGAGGCCCAAGCATGGCCAGCAGAGGCTCAGCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: SHKVSSTSGAARGME*NKEAQAWPAEAQQA Trigger: TGCCTGCTGAGCCTCTGCTGGCCATGCTTGGGCCTCCTTGTTTCACTCCATCCCTCTGGCAGCCCCAGAGGTGGAGGATACCTTATGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
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| 3UTR TCA 90 bp | CAGCAGCTCAGTTCTCACACCGAAGAGTCCCTGATCCTGGGCACCTaGGAGAGTGGTGCTGAATACCTGAGAGGTAGCCGCCAGGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: QQLSSHTEESLILGT*ESGAEYLRGSRQAQ Trigger: CTGGGCCTGGCGGCTACCTCTCAGGTATTCAGCACCACTCTCTCAGGTGCCCAGGATCAGGGACTCTTCGGTGTGAGAACTGAGCTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
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| 3UTR CCA 90 bp | ATGCCACAGCCATGTGGGGTGGCATCTCTGGCCCTGGCACCAACCTaGGATTCCCAAGGGGAAGGGTGTATGCAAGTGACAGCCAAGAGC | + |
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Preference number: 1 (lower is better) Translates to: MPQPCGVASLALAPT*DSQGEGCMQVTAKS Trigger: GCTCTTGGCTGTCACTTGCATACACCCTTCCCCTTGGGAATCCCAGGTTGGTGCCAGGGCCAGAGATGCCACCCCACATGGCTGTGGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
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| 3UTR CCA 90 bp | ACCCGCGTTCACTGCCCCTTGTCTGGCGCAAATGGGTGTTTGCTCTaGGTGAATCACCGTTTCTTAGGTGCTGCCAAGCGCCCAGAGAGC | + |
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Preference number: 1 (lower is better) Translates to: TRVHCPLSGANGCLL*VNHRFLGAAKRPES Trigger: GCTCTCTGGGCGCTTGGCAGCACCTAAGAAACGGTGATTCACCCAGAGCAAACACCCATTTGCGCCAGACAAGGGGCAGTGAACGCGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
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| 3UTR TCA 90 bp | AAGGCCAAAGACTGGTGGTGGGTCCACGGAATCTGCCCTGTGACATaGAAGGCTTTGAGGGGCTCTGGCTGGTGGCCAGGTTGGCTTTTT | + |
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Preference number: 1 (lower is better) Translates to: KAKDWWWVHGICPVT*KALRGSGWWPGWLF Trigger: AAAAAGCCAACCTGGCCACCAGCCAGAGCCCCTCAAAGCCTTTCATGTCACAGGGCAGATTCCGTGGACCCACCACCAGTCTTTGGCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
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| 3UTR GCA 90 bp | TCACTCTGGCCAGTGACAAGCGGTCTTTTGAGTGTGTTGCCCCTGTaGAGAAGGCAGGGTGGTCAGGTAAGCCACCTAGGCAGAGACTCA | + |
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Preference number: 1 (lower is better) Translates to: SLWPVTSGLLSVLPL*RRQGGQVSHLGRDS Trigger: TGAGTCTCTGCCTAGGTGGCTTACCTGACCACCCTGCCTTCTGCACAGGGGCAACACACTCAAAAGACCGCTTGTCACTGGCCAGAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
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| 3UTR GCA 90 bp | TCTGCCTCCAGGGATCCTGGGACCCTGATGGCGATCGTCCTGTCATaGTGGGCCCTTCATTTGATCTGGGACATAGCATCACAGCAGTCA | + |
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Preference number: 1 (lower is better) Translates to: SASRDPGTLMAIVLS*WALHLIWDIASQQS Trigger: TGACTGCTGTGATGCTATGTCCCAGATCAAATGAAGGGCCCAGCATGACAGGACGATCGCCATCAGGGTCCCAGGATCCCTGGAGGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
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| 3UTR CCA 90 bp | ATAAGCATCCGAGCCGGGTCCACAGTCACATGGCATCCAGGAGAATaGGCATGGGGCCGTCAGCATTCCAGGAAATGGCCAAAGGGCATT | + |
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Preference number: 1 (lower is better) Translates to: ISIRAGSTVTWHPGE*AWGRQHSRKWPKGI Trigger: AATGCCCTTTGGCCATTTCCTGGAATGCTGACGGCCCCATGCCCATTCTCCTGGATGCCATGTGACTGTGGACCCGGCTCGGATGCTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105895.2 |
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| 3UTR GCA 90 bp | GGTGCTGAATACCTGAGAGGTAGCCGCCAGGCCCAGGAGGCCAGGTaGATGGTGCCCCAAGCCTCAGACTCAAAACATATTTACAAATCC | + |
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Preference number: 1 (lower is better) Translates to: GAEYLRGSRQAQEAR*MVPQASDSKHIYKS Trigger: GGATTTGTAAATATGTTTTGAGTCTGAGGCTTGGGGCACCATGCACCTGGCCTCCTGGGCCTGGCGGCTACCTCTCAGGTATTCAGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
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| 3UTR GCA 90 bp | CGCAAATGGGTGTTTGCTCTGGGTGAATCACCGTTTCTTAGGTGCTaGCAAGCGCCCAGAGAGCCATGCTTAGTGTTAGGGCCAAGACCC | + |
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Preference number: 1 (lower is better) Translates to: RKWVFALGESPFLRC*QAPREPCLVLGPRP Trigger: GGGTCTTGGCCCTAACACTAAGCATGGCTCTCTGGGCGCTTGGCAGCACCTAAGAAACGGTGATTCACCCAGAGCAAACACCCATTTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
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| 3UTR GCA 90 bp | AAGCGGCTCTGGGTCCATCACTGCCAGCTCACCCTCCTGCTTATTTaGAGATGGAAGATCAACAGAACCCGCGTTCACTGCCCCTTGTCT | + |
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Preference number: 1 (lower is better) Translates to: KRLWVHHCQLTLLLI*RWKINRTRVHCPLS Trigger: AGACAAGGGGCAGTGAACGCGGGTTCTGTTGATCTTCCATCTGCAAATAAGCAGGAGGGTGAGCTGGCAGTGATGGACCCAGAGCCGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
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| 3UTR TCA 90 bp | GGACGGAGAGAAGCCCACAGTGACCTTGCCAGGCGACCTACTCAATaGGAGTATATGGGAACACCAGAGCCAGAGGTGGCTTATGAAGAC | + |
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Preference number: 1 (lower is better) Translates to: GRREAHSDLARRPTQ*EYMGTPEPEVAYED Trigger: GTCTTCATAAGCCACCTCTGGCTCTGGTGTTCCCATATACTCTCATTGAGTAGGTCGCCTGGCAAGGTCACTGTGGGCTTCTCTCCGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105895.2 ENSMUST00000128057.8 |
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| 3UTR GCA 90 bp | TGGCGCAAATGGGTGTTTGCTCTGGGTGAATCACCGTTTCTTAGGTaGTGCCAAGCGCCCAGAGAGCCATGCTTAGTGTTAGGGCCAAGA | + |
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Preference number: 1 (lower is better) Translates to: WRKWVFALGESPFLR*CQAPREPCLVLGPR Trigger: TCTTGGCCCTAACACTAAGCATGGCTCTCTGGGCGCTTGGCAGCACCTAAGAAACGGTGATTCACCCAGAGCAAACACCCATTTGCGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
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| 3UTR GCA 90 bp | CTCACATCCTCCCTGGTAGATCTCCCACCTGGCTCTATCCCAGAATaGTTTCTCTCTCCCAGATGTTCCGCCTATTTCCTGCCTAAGCCA | + |
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Preference number: 1 (lower is better) Translates to: LTSSLVDLPPGSIPE*FLSPRCSAYFLPKP Trigger: TGGCTTAGGCAGGAAATAGGCGGAACATCTGGGAGAGAGAAAGCATTCTGGGATAGAGCCAGGTGGGAGATCTACCAGGGAGGATGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
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| 3UTR GCA 90 bp | CCCTTCTGGAAAGTGGAGGGTGTAGATGACACCTGGTCTGAGTGGTaGCACCCAATGATGAAAGCAGAAAGAGATGGACGGAGAGAAGCC | + |
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Preference number: 1 (lower is better) Translates to: PFWKVEGVDDTWSEW*HPMMKAERDGRREA Trigger: GGCTTCTCTCCGTCCATCTCTTTCTGCTTTCATCATTGGGTGGCACCACTCAGACCAGGTGTCATCTACACCCTCCACTTTCCAGAAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105895.2 ENSMUST00000128057.8 |
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| 3UTR CCA 90 bp | ACCATGTGTCCATCTCCTCACATCCTCCCTGGTAGATCTCCCACCTaGCTCTATCCCAGAATGCTTTCTCTCTCCCAGATGTTCCGCCTA | + |
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Preference number: 1 (lower is better) Translates to: TMCPSPHILPGRSPT*LYPRMLSLSQMFRL Trigger: TAGGCGGAACATCTGGGAGAGAGAAAGCATTCTGGGATAGAGCCAGGTGGGAGATCTACCAGGGAGGATGTGAGGAGATGGACACATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
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| 3UTR CCA 90 bp | GAAGATCAACAGAACCCGCGTTCACTGCCCCTTGTCTGGCGCAAATaGGTGTTTGCTCTGGGTGAATCACCGTTTCTTAGGTGCTGCCAA | + |
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Preference number: 1 (lower is better) Translates to: EDQQNPRSLPLVWRK*VFALGESPFLRCCQ Trigger: TTGGCAGCACCTAAGAAACGGTGATTCACCCAGAGCAAACACCCATTTGCGCCAGACAAGGGGCAGTGAACGCGGGTTCTGTTGATCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
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| 3UTR GCA 90 bp | CTCCTGCTTATTTGCAGATGGAAGATCAACAGAACCCGCGTTCACTaGCCCTTGTCTGGCGCAAATGGGTGTTTGCTCTGGGTGAATCAC | + |
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Preference number: 1 (lower is better) Translates to: LLLICRWKINRTRVH*PLSGANGCLLWVNH Trigger: GTGATTCACCCAGAGCAAACACCCATTTGCGCCAGACAAGGGGCAGTGAACGCGGGTTCTGTTGATCTTCCATCTGCAAATAAGCAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
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| 3UTR GCA 90 bp | CATTGTGCTAATGTAAAGACTCTGCCTTTGCGAAGCCAGCTGCAGTaGTGTAGGCCCCCAAGTTCCCTAGCAAGCTGCCAAACCAAAACG | + |
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Preference number: 1 (lower is better) Translates to: HCANVKTLPLRSQLQ*CRPPSSLASCQTKT Trigger: CGTTTTGGTTTGGCAGCTTGCTAGGGAACTTGGGGGCCTACAGCACTGCAGCTGGCTTCGCAAAGGCAGAGTCTTTACATTAGCACAATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
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| 3UTR CCA 90 bp | CTGCCCTTCTGGAAAGTGGAGGGTGTAGATGACACCTGGTCTGAGTaGTGCCACCCAATGATGAAAGCAGAAAGAGATGGACGGAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: LPFWKVEGVDDTWSE*CHPMMKAERDGRRE Trigger: TTCTCTCCGTCCATCTCTTTCTGCTTTCATCATTGGGTGGCACCACTCAGACCAGGTGTCATCTACACCCTCCACTTTCCAGAAGGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105895.2 ENSMUST00000128057.8 |
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| 3UTR CCA 90 bp | TTGCAGATGGAAGATCAACAGAACCCGCGTTCACTGCCCCTTGTCTaGCGCAAATGGGTGTTTGCTCTGGGTGAATCACCGTTTCTTAGG | + |
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Preference number: 1 (lower is better) Translates to: LQMEDQQNPRSLPLV*RKWVFALGESPFLR Trigger: CCTAAGAAACGGTGATTCACCCAGAGCAAACACCCATTTGCGCCAGACAAGGGGCAGTGAACGCGGGTTCTGTTGATCTTCCATCTGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
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| 3UTR TCA 90 bp | CCCAATGATGAAAGCAGAAAGAGATGGACGGAGAGAAGCCCACAGTaGCCTTGCCAGGCGACCTACTCAATGAGAGTATATGGGAACACC | + |
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Preference number: 1 (lower is better) Translates to: PNDESRKRWTERSPQ*PCQATYSMRVYGNT Trigger: GGTGTTCCCATATACTCTCATTGAGTAGGTCGCCTGGCAAGGTCACTGTGGGCTTCTCTCCGTCCATCTCTTTCTGCTTTCATCATTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105895.2 ENSMUST00000128057.8 |
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| 3UTR CCA 90 bp | AAGCCCACAGTGACCTTGCCAGGCGACCTACTCAATGAGAGTATATaGGAACACCAGAGCCAGAGGTGGCTTATGAAGACACAGTACTCA | + |
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Preference number: 1 (lower is better) Translates to: KPTVTLPGDLLNESI*EHQSQRWLMKTQYS Trigger: TGAGTACTGTGTCTTCATAAGCCACCTCTGGCTCTGGTGTTCCCATATACTCTCATTGAGTAGGTCGCCTGGCAAGGTCACTGTGGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105895.2 ENSMUST00000128057.8 |
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| 3UTR GCA 90 bp | ACAGGTGAGGCATCCATACAACACAAAGATATTCTCTCTATGAAATaGCTGAGAGCACTGTGCCACTCCTGCCAGCTCGTCTTATATCTG | + |
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Preference number: 1 (lower is better) Translates to: TGEASIQHKDILSMK*LRALCHSCQLVLYL Trigger: CAGATATAAGACGAGCTGGCAGGAGTGGCACAGTGCTCTCAGGCATTTCATAGAGAGAATATCTTTGTGTTGTATGGATGCCTCACCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
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| 3UTR TCA 90 bp | TACTCAATGAGAGTATATGGGAACACCAGAGCCAGAGGTGGCTTATaGAGACACAGTACTCATCTTGTACCAAATTGTCTGATGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: YSMRVYGNTRARGGL*RHSTHLVPNCLMAG Trigger: TCCTGCCATCAGACAATTTGGTACAAGATGAGTACTGTGTCTTCATAAGCCACCTCTGGCTCTGGTGTTCCCATATACTCTCATTGAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105895.2 ENSMUST00000128057.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTATGCAAGTGACAGCCAAGAGCAAAGTGGGAGCCTCTGGCGTCAGGGAGGCGCTTGGCTGTTTTGGTaGCTGGTGGGCCCCTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: VYASDSQEQSGSLWRQGGAWLFW*LVGPCP Trigger: AGGGCAGGGGCCCACCAGGCACCAAAACAGCCAAGC...GCCTCCCTGACGCCAGAGGCTCCCACTTTGCTCTTGGCTGTCACTTGCATACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCCTCCAGTGGTGTTGGCAATGACAGCGCATGTTGGAGGCAGAGGCACTATGTTCAGGGCATGGACCTaGGGTGGGGGCCAGCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: GPPVVLAMTAHVGGRGTMFRAWT*GGGQLC Trigger: GCAGAGCTGGCCCCCACCCCAGGTCCATGCCCTGAA...CATAGTGCCTCTGCCTCCAACATGCGCTGTCATTGCCAACACCACTGGAGGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
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| 3UTR-3UTR CCA 90 bp | GCCTCCAGGGATCCTGGGACCCTGATGGCGATCGTCCTGTCATGCTGGGCCCTTTTGAGGGGCTCTGGCTaGTGGCCAGGTTGGCTTTTT | + |
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Preference number: 2 (lower is better) Translates to: ASRDPGTLMAIVLSCWALLRGSG*WPGWLF Trigger: AAAAAGCCAACCTGGCCACCAGCCAGAGCCCCTCAA...AAGGGCCCAGCATGACAGGACGATCGCCATCAGGGTCCCAGGATCCCTGGAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
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| 3UTR CAA 90 bp | CAGGGCCACTCACTCTGGCCAGTGACAAGCGGTCTTTTGAGTGTGTaGCCCCTGTGCAGAAGGCAGGGTGGTCAGGTAAGCCACCTAGGC | + |
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Preference number: 2 (lower is better) Translates to: QGHSLWPVTSGLLSV*PLCRRQGGQVSHLG Trigger: GCCTAGGTGGCTTACCTGACCACCCTGCCTTCTGCACAGGGGCAACACACTCAAAAGACCGCTTGTCACTGGCCAGAGTGAGTGGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
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| 3UTR-3UTR CCA 90 bp | GGCTGCCAGAGGGATGGAGTGAAACAAGGAGGCCCAAGCATGGCCAGCAGAGGCGGGAAGAGGCCAAGCTaGTCCTCCCACAGAACAATG | + |
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Preference number: 2 (lower is better) Translates to: GCQRDGVKQGGPSMASRGGKRPS*SSHRTM Trigger: CATTGTTCTGTGGGAGGACCAGCTTGGCCTCTTCCC...GCCTCTGCTGGCCATGCTTGGGCCTCCTTGTTTCACTCCATCCCTCTGGCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
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| 3UTR CAA 90 bp | AACCCTACCCAGGGCCACTCACTCTGGCCAGTGACAAGCGGTCTTTaGAGTGTGTTGCCCCTGTGCAGAAGGCAGGGTGGTCAGGTAAGC | + |
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Preference number: 2 (lower is better) Translates to: NPTQGHSLWPVTSGL*SVLPLCRRQGGQVS Trigger: GCTTACCTGACCACCCTGCCTTCTGCACAGGGGCAACACACTCAAAAGACCGCTTGTCACTGGCCAGAGTGAGTGGCCCTGGGTAGGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
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| 3UTR-3UTR TCA 90 bp | CTGCCCTTCTGGAAAGTGGAGGGTGTAGATGACACCTGGTCTGAGTGGTGCCACGAGAGAAGCCCACAGTaGCCTTGCCAGGCGACCTAC | + |
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Preference number: 2 (lower is better) Translates to: LPFWKVEGVDDTWSEWCHERSPQ*PCQATY Trigger: GTAGGTCGCCTGGCAAGGTCACTGTGGGCTTCTCTC...GTGGCACCACTCAGACCAGGTGTCATCTACACCCTCCACTTTCCAGAAGGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105895.2 ENSMUST00000128057.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCCTCCAGTGGTGTTGGCAATGACAGCGCATGTTGGAGGCAGAGGCACTATGGGTATCCTCCACCTCTaGGGCTGCCAGAGGGATGGA | + |
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Preference number: 2 (lower is better) Translates to: GPPVVLAMTAHVGGRGTMGILHL*GCQRDG Trigger: TCCATCCCTCTGGCAGCCCCAGAGGTGGAGGATACC...CATAGTGCCTCTGCCTCCAACATGCGCTGTCATTGCCAACACCACTGGAGGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
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| 3UTR-3UTR CCA 90 bp | GCCTCCAGGGATCCTGGGACCCTGATGGCGATCGTCCTGTCATGCTGGGCCCTTGTGATGTCTTCGGGGTaGCAGTTACTCATGACTAGT | + |
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Preference number: 2 (lower is better) Translates to: ASRDPGTLMAIVLSCWALVMSSG*QLLMTS Trigger: ACTAGTCATGAGTAACTGCCACCCCGAAGACATCAC...AAGGGCCCAGCATGACAGGACGATCGCCATCAGGGTCCCAGGATCCCTGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
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| 3UTR CAA 90 bp | AACAGAACCCGCGTTCACTGCCCCTTGTCTGGCGCAAATGGGTGTTaGCTCTGGGTGAATCACCGTTTCTTAGGTGCTGCCAAGCGCCCA | + |
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Preference number: 2 (lower is better) Translates to: NRTRVHCPLSGANGC*LWVNHRFLGAAKRP Trigger: TGGGCGCTTGGCAGCACCTAAGAAACGGTGATTCACCCAGAGCAAACACCCATTTGCGCCAGACAAGGGGCAGTGAACGCGGGTTCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
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| 3UTR CAA 90 bp | GAAGCGGCTCTGGGTCCATCACTGCCAGCTCACCCTCCTGCTTATTaGCAGATGGAAGATCAACAGAACCCGCGTTCACTGCCCCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: EAALGPSLPAHPPAY*QMEDQQNPRSLPLV Trigger: GACAAGGGGCAGTGAACGCGGGTTCTGTTGATCTTCCATCTGCAAATAAGCAGGAGGGTGAGCTGGCAGTGATGGACCCAGAGCCGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGCATTCTGCCAGCTGGCTGGTTACCTGTGCTCAGGTACCATGTGTCCATCTCTCCACCTCTGGGGCTaGCAGAGGGATGGAGTGAAA | + |
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Preference number: 2 (lower is better) Translates to: PAFCQLAGYLCSGTMCPSLHLWG*QRDGVK Trigger: TTTCACTCCATCCCTCTGGCAGCCCCAGAGGTGGAG...AGATGGACACATGGTACCTGAGCACAGGTAACCAGCCAGCTGGCAGAATGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
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| 3UTR-3UTR CCA 90 bp | CTGCATTCTGCCAGCTGGCTGGTTACCTGTGCTCAGGTACCATGTGTCCATCTCGTGCAGAAGGCAGGGTaGTCAGGTAAGCCACCTAGG | + |
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Preference number: 2 (lower is better) Translates to: LHSASWLVTCAQVPCVHLVQKAG*SGKPPR Trigger: CCTAGGTGGCTTACCTGACCACCCTGCCTTCTGCAC...GAGATGGACACATGGTACCTGAGCACAGGTAACCAGCCAGCTGGCAGAATGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
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| 3UTR-3UTR CCA 90 bp | GATGGCGATCGTCCTGTCATGCTGGGCCCTTCATTTGATCTGGGACATAGCATCGATGCCACAGCCATGTaGGGTGGCATCTCTGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: DGDRPVMLGPSFDLGHSIDATAM*GGISGP Trigger: AGGGCCAGAGATGCCACCCCACATGGCTGTGGCATC...GATGCTATGTCCCAGATCAAATGAAGGGCCCAGCATGACAGGACGATCGCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTCAGCTTCCTCCCTTGTCTCGTCACCCTTGTTTTCTCAGCTGGGCATCCAGGGCAGAGGCACTATGTaGTACTTCAGGGCATGGACC | + |
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Preference number: 2 (lower is better) Translates to: ASASSLVSSPLFSQLGIQGRGTM*YFRAWT Trigger: GGTCCATGCCCTGAAGTACCACATAGTGCCTCTGCC...CTGGATGCCCAGCTGAGAAAACAAGGGTGACGAGACAAGGGAGGAAGCTGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
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| 3UTR-3UTR CCA 90 bp | CTTCTACAAGGTAGCTTTTGGGTCTCAGCTTGGCTGTTTTGGTGCCTGGTGGGCTGGCATCCAGGAGAATaGGCATGGGGCCGTCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: LLQGSFWVSAWLFWCLVGWHPGE*AWGRQH Trigger: ATGCTGACGGCCCCATGCCCATTCTCCTGGATGCCA...GCCCACCAGGCACCAAAACAGCCAAGCTGAGACCCAAAAGCTACCTTGTAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105895.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGCTGTTTTGGTGCCTGGTGGGCCCCTGCCCTTCTGGAAAGTGGAGGGTGTAGAAAGCAGAAAGAGATaGACGGAGAGAAGCCCACAG | + |
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Preference number: 2 (lower is better) Translates to: LAVLVPGGPLPFWKVEGVESRKR*TERSPQ Trigger: CTGTGGGCTTCTCTCCGTCCATCTCTTTCTGCTTTC...TACACCCTCCACTTTCCAGAAGGGCAGGGGCCCACCAGGCACCAAAACAGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105895.2 ENSMUST00000128057.8 |
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| 3UTR CAA 90 bp | ACACCTGTTAGGAGCAGCATGAAGGCCCTGCTTCAGCTTCCTCCCTaGTCTCGTCACCCTTGTTTTCTCAGCTGGGCATCCAGAGGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: TPVRSSMKALLQLPP*SRHPCFLSWASRGK Trigger: TTTGCCTCTGGATGCCCAGCTGAGAAAACAAGGGTGACGAGACAAGGGAGGAAGCTGAAGCAGGGCCTTCATGCTGCTCCTAACAGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| 3UTR-3UTR CCA 90 bp | TCCTGTTCACAATACCTCATGTATCATCTAGCCATGCACGAGCCTGGCAGGCAGGATCAGAAGCGGCTCTaGGTCCATCACTGCCAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: SCSQYLMYHLAMHEPGRQDQKRL*VHHCQL Trigger: GAGCTGGCAGTGATGGACCCAGAGCCGCTTCTGATC...CTGCCTGCCAGGCTCGTGCATGGCTAGATGATACATGAGGTATTGTGAACAGGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| 3UTR-3UTR TCA 90 bp | GACACCTGGTCTGAGTGGTGCCACCCAATGATGAAAGCAGAAAGAGATGGACGGATGGCCAAAGGGCATTaGGGTGGAAGAGTGCTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: DTWSEWCHPMMKAERDGRMAKGH*GGRVLS Trigger: GGAAAGCACTCTTCCACCTCAATGCCCTTTGGCCAT...CCGTCCATCTCTTTCTGCTTTCATCATTGGGTGGCACCACTCAGACCAGGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105895.2 |
||
| 3UTR-3UTR CCA 90 bp | CATTCTGCCAGCTGGCTGGTTACCTGTGCTCAGGTACCATGTGTCCATCTCCTCAATGACAGCGCATGTTaGAGGCAGAGGCACTATGTG | + |
|
Preference number: 2 (lower is better) Translates to: HSASWLVTCAQVPCVHLLNDSAC*RQRHYV Trigger: CACATAGTGCCTCTGCCTCCAACATGCGCTGTCATT...GAGGAGATGGACACATGGTACCTGAGCACAGGTAACCAGCCAGCTGGCAGAATG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| 3UTR-3UTR CCA 90 bp | CAGGATCCAGAAGGTATTTTGTCAGCCCAGCTCCATATAAGCATCCGAGCCGGGCAAAGGGCATTGAGGTaGAAGAGTGCTTTCCCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: QDPEGILSAQLHISIRAGQRALR*KSAFPL Trigger: AAGGGGGAAAGCACTCTTCCACCTCAATGCCCTTTG...CCCGGCTCGGATGCTTATATGGAGCTGGGCTGACAAAATACCTTCTGGATCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105895.2 |
||
| 3UTR CAA 90 bp | CTTATTTGCAGATGGAAGATCAACAGAACCCGCGTTCACTGCCCCTaGTCTGGCGCAAATGGGTGTTTGCTCTGGGTGAATCACCGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LICRWKINRTRVHCP*SGANGCLLWVNHRF Trigger: GAAACGGTGATTCACCCAGAGCAAACACCCATTTGCGCCAGACAAGGGGCAGTGAACGCGGGTTCTGTTGATCTTCCATCTGCAAATAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGAGTGGTGCCACCCAATGATGAAAGCAGAAAGAGATGGACGGAGAGAAGCCCACCAGAGCCAGAGGTaGCTTATGAAGACACAGTAC | + |
|
Preference number: 2 (lower is better) Translates to: SEWCHPMMKAERDGRREAHQSQR*LMKTQY Trigger: GTACTGTGTCTTCATAAGCCACCTCTGGCTCTGGTG...GGCTTCTCTCCGTCCATCTCTTTCTGCTTTCATCATTGGGTGGCACCACTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105895.2 ENSMUST00000128057.8 |
||
| 3UTR-3UTR TCA 90 bp | CTAATGGAATGGATGGGGATGTCCACACACGCATTCAGATGGCTGTACAACAGGGTAGGGCTGGTAGTATaGGGTGCTTGGGAAGTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: LMEWMGMSTHAFRWLYNRVGLVV*GAWEVL Trigger: CAAAACTTCCCAAGCACCTCATACTACCAGCCCTAC...CCTGTTGTACAGCCATCTGAATGCGTGTGTGGACATCCCCATCCATTCCATTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207453.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTCTATCCCAGAATGCTTTCTCTCTCCCAGATGTTCCGCCTATTTCCTGCCTACCTTGTTTTCTCAGCTaGGCATCCAGAGGCAAACCA | + |
|
Preference number: 2 (lower is better) Translates to: ALSQNAFSLPDVPPISCLPCFLS*ASRGKP Trigger: TGGTTTGCCTCTGGATGCCCAGCTGAGAAAACAAGG...TAGGCAGGAAATAGGCGGAACATCTGGGAGAGAGAAAGCATTCTGGGATAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| 3UTR-3UTR TCA 90 bp | AGGTTCCTGTTCACAATACCTCATGTATCATCTAGCCATGCACGAGCCTGGCAGAGGCGACCTACTCAATaGGAGTATATGGGAACACCA | + |
|
Preference number: 2 (lower is better) Translates to: RFLFTIPHVSSSHARAWQRRPTQ*EYMGTP Trigger: TGGTGTTCCCATATACTCTCATTGAGTAGGTCGCCT...CTGCCAGGCTCGTGCATGGCTAGATGATACATGAGGTATTGTGAACAGGAACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCTGTTCACAATACCTCATGTATCATCTAGCCATGCACGAGCCTGGCAGGCAGACCCTCCTGCTTATTTaGAGATGGAAGATCAACAGA | + |
|
Preference number: 2 (lower is better) Translates to: SCSQYLMYHLAMHEPGRQTLLLI*RWKINR Trigger: TCTGTTGATCTTCCATCTGCAAATAAGCAGGAGGGT...CTGCCTGCCAGGCTCGTGCATGGCTAGATGATACATGAGGTATTGTGAACAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| 3UTR CCA 72 bp | CTGGCAGGCAGGTGGGCGGTCTGCCTCCAGGGATCCTaGGACCCTGATGGCGATCGTCCTGTCATGCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LAGRWAVCLQGS*DPDGDRPVMLG Trigger: GCCCAGCATGACAGGACGATCGCCATCAGGGTCCCAGGATCCCTGGAGGCAGACCGCCCACCTGCCTGCCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| 3UTR TCA 72 bp | GGAGCCTCTGGCGTCAGGGAGGCCAGCGACAGCCACTaGTCAGAAGCGGCTCTGGGTCCATCACTGCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GASGVREASDSH*SEAALGPSLPA Trigger: AGCTGGCAGTGATGGACCCAGAGCCGCTTCTGATCAGTGGCTGTCGCTGGCCTCCCTGACGCCAGAGGCTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| 3UTR CCA 72 bp | GTTGGAGGCAGAGGCACTATGTGGTACTTCAGGGCATaGACCTGGGGTGGGGGCCAGCTCTGCCACCAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: VGGRGTMWYFRA*TWGGGQLCHQA Trigger: GGCCTGGTGGCAGAGCTGGCCCCCACCCCAGGTCCATGCCCTGAAGTACCACATAGTGCCTCTGCCTCCAAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| 3UTR TCA 72 bp | CAGGTGGGCGGTCTGCCTCCAGGGATCCTGGGACCCTaGTGGCGATCGTCCTGTCATGCTGGGCCCTTCATT | + |
|
Preference number: 3 (lower is better) Translates to: QVGGLPPGILGP*WRSSCHAGPFI Trigger: AATGAAGGGCCCAGCATGACAGGACGATCGCCATCAGGGTCCCAGGATCCCTGGAGGCAGACCGCCCACCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| 3UTR CCA 72 bp | GGCAGAGGCACTATGTGGTACTTCAGGGCATGGACCTaGGGTGGGGGCCAGCTCTGCCACCAGGCCCTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: GRGTMWYFRAWT*GGGQLCHQALR Trigger: TCTAAGGGCCTGGTGGCAGAGCTGGCCCCCACCCCAGGTCCATGCCCTGAAGTACCACATAGTGCCTCTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| 3UTR CCA 72 bp | CGAGCCGGGTCCACAGTCACATGGCATCCAGGAGAATaGGCATGGGGCCGTCAGCATTCCAGGAAATGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: RAGSTVTWHPGE*AWGRQHSRKWP Trigger: TGGCCATTTCCTGGAATGCTGACGGCCCCATGCCCATTCTCCTGGATGCCATGTGACTGTGGACCCGGCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105895.2 |
||
| 3UTR CCA 72 bp | GGGAGGCCAGCGACAGCCACTGATCAGAAGCGGCTCTaGGTCCATCACTGCCAGCTCACCCTCCTGCTTATT | + |
|
Preference number: 3 (lower is better) Translates to: GRPATATDQKRL*VHHCQLTLLLI Trigger: AATAAGCAGGAGGGTGAGCTGGCAGTGATGGACCCAGAGCCGCTTCTGATCAGTGGCTGTCGCTGGCCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| 3UTR GCA 72 bp | CTGCAGTGCTGTAGGCCCCCAAGTTCCCTAGCAAGCTaGCAAACCAAAACGGGCACCACCAGCTCAGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LQCCRPPSSLAS*QTKTGTTSSAE Trigger: CTCAGCTGAGCTGGTGGTGCCCGTTTTGGTTTGGCAGCTTGCTAGGGAACTTGGGGGCCTACAGCACTGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| 3UTR CCA 72 bp | CCATGTGGGGTGGCATCTCTGGCCCTGGCACCAACCTaGGATTCCCAAGGGGAAGGGTGTATGCAAGTGACA | + |
|
Preference number: 3 (lower is better) Translates to: PCGVASLALAPT*DSQGEGCMQVT Trigger: TGTCACTTGCATACACCCTTCCCCTTGGGAATCCCAGGTTGGTGCCAGGGCCAGAGATGCCACCCCACATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCGGGTCCACAGTCACATGGCATCCAGGAGAATGGGCATGGGGCCGTCAGCATAATGGCCAAAGGGCATaGAGGTGGAAGAGTGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: AGSTVTWHPGEWAWGRQHNGQRA*RWKSAF Trigger: GAAAGCACTCTTCCACCTCAATGCCCTTTGGCCATT...ATGCTGACGGCCCCATGCCCATTCTCCTGGATGCCATGTGACTGTGGACCCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105895.2 |
||
| 3UTR GCA 72 bp | CCAGTGACAAGCGGTCTTTTGAGTGTGTTGCCCCTGTaGAGAAGGCAGGGTGGTCAGGTAAGCCACCTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: PVTSGLLSVLPL*RRQGGQVSHLG Trigger: GCCTAGGTGGCTTACCTGACCACCCTGCCTTCTGCACAGGGGCAACACACTCAAAAGACCGCTTGTCACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| 3UTR CCA 72 bp | CTCCATATAAGCATCCGAGCCGGGTCCACAGTCACATaGCATCCAGGAGAATGGGCATGGGGCCGTCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: LHISIRAGSTVT*HPGEWAWGRQH Trigger: ATGCTGACGGCCCCATGCCCATTCTCCTGGATGCCATGTGACTGTGGACCCGGCTCGGATGCTTATATGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105895.2 |
||
| 3UTR CCA 72 bp | TATGCAAGTGACAGCCAAGAGCAAAGTGGGAGCCTCTaGCGTCAGGGAGGCCAGCGACAGCCACTGATCAGA | + |
|
Preference number: 3 (lower is better) Translates to: YASDSQEQSGSL*RQGGQRQPLIR Trigger: TCTGATCAGTGGCTGTCGCTGGCCTCCCTGACGCCAGAGGCTCCCACTTTGCTCTTGGCTGTCACTTGCATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| 3UTR TCA 72 bp | AGTTCTCACACCGAAGAGTCCCTGATCCTGGGCACCTaGGAGAGTGGTGCTGAATACCTGAGAGGTAGCCGC | + |
|
Preference number: 3 (lower is better) Translates to: SSHTEESLILGT*ESGAEYLRGSR Trigger: GCGGCTACCTCTCAGGTATTCAGCACCACTCTCTCAGGTGCCCAGGATCAGGGACTCTTCGGTGTGAGAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| 3UTR TCA 72 bp | CAACCTGGGATTCCCAAGGGGAAGGGTGTATGCAAGTaGCAGCCAAGAGCAAAGTGGGAGCCTCTGGCGTCA | + |
|
Preference number: 3 (lower is better) Translates to: QPGIPKGKGVCK*QPRAKWEPLAS Trigger: TGACGCCAGAGGCTCCCACTTTGCTCTTGGCTGTCACTTGCATACACCCTTCCCCTTGGGAATCCCAGGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| 3UTR GCA 72 bp | CCGTTTCTTAGGTGCTGCCAAGCGCCCAGAGAGCCATaGTTAGTGTTAGGGCCAAGACCCAAGGTGGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: PFLRCCQAPREP*LVLGPRPKVAF Trigger: AAAGGCCACCTTGGGTCTTGGCCCTAACACTAAGCATGGCTCTCTGGGCGCTTGGCAGCACCTAAGAAACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| 3UTR GCA 72 bp | AGCGGCTCTGGGTCCATCACTGCCAGCTCACCCTCCTaGTTATTTGCAGATGGAAGATCAACAGAACCCGCG | + |
|
Preference number: 3 (lower is better) Translates to: SGSGSITASSPS*LFADGRSTEPA Trigger: CGCGGGTTCTGTTGATCTTCCATCTGCAAATAAGCAGGAGGGTGAGCTGGCAGTGATGGACCCAGAGCCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| 3UTR CCA 72 bp | GGAGAATGGGCATGGGGCCGTCAGCATTCCAGGAAATaGCCAAAGGGCATTGAGGTGGAAGAGTGCTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: GEWAWGRQHSRK*PKGIEVEECFP Trigger: GGGAAAGCACTCTTCCACCTCAATGCCCTTTGGCCATTTCCTGGAATGCTGACGGCCCCATGCCCATTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105895.2 |
||
| 3UTR CCA 72 bp | CACTGCCCCTTGTCTGGCGCAAATGGGTGTTTGCTCTaGGTGAATCACCGTTTCTTAGGTGCTGCCAAGCGC | + |
|
Preference number: 3 (lower is better) Translates to: HCPLSGANGCLL*VNHRFLGAAKR Trigger: GCGCTTGGCAGCACCTAAGAAACGGTGATTCACCCAGAGCAAACACCCATTTGCGCCAGACAAGGGGCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCAGCTTCCTCCCTTGTCTCGTCACCCTTGTTTTCTCAGCTGGGCATCCAGGGTCCTCCAGTGGTGTaGGCAATGACAGCGCATGTT | + |
|
Preference number: 3 (lower is better) Translates to: ASASSLVSSPLFSQLGIQGPPVV*AMTAHV Trigger: AACATGCGCTGTCATTGCCAACACCACTGGAGGACC...CTGGATGCCCAGCTGAGAAAACAAGGGTGACGAGACAAGGGAGGAAGCTGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| 3UTR TCA 72 bp | GAAGCCCACAGTGACCTTGCCAGGCGACCTACTCAATaGGAGTATATGGGAACACCAGAGCCAGAGGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: EAHSDLARRPTQ*EYMGTPEPEVA Trigger: AGCCACCTCTGGCTCTGGTGTTCCCATATACTCTCATTGAGTAGGTCGCCTGGCAAGGTCACTGTGGGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105895.2 ENSMUST00000128057.8 |
||
| 3UTR TCA 72 bp | AGACCCAAGGTGGCCTTTCACATAGTTCTGCAGACCTaGGTGGCCTGGCAAGACTCCTGTGATGTCTTCGGG | + |
|
Preference number: 3 (lower is better) Translates to: RPKVAFHIVLQT*VAWQDSCDVFG Trigger: CCCGAAGACATCACAGGAGTCTTGCCAGGCCACTCAGGTCTGCAGAACTATGTGAAAGGCCACCTTGGGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| 3UTR CCA 72 bp | CAGAACCCGCGTTCACTGCCCCTTGTCTGGCGCAAATaGGTGTTTGCTCTGGGTGAATCACCGTTTCTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: QNPRSLPLVWRK*VFALGESPFLR Trigger: CCTAAGAAACGGTGATTCACCCAGAGCAAACACCCATTTGCGCCAGACAAGGGGCAGTGAACGCGGGTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| 3UTR CCA 72 bp | GAAGATCAACAGAACCCGCGTTCACTGCCCCTTGTCTaGCGCAAATGGGTGTTTGCTCTGGGTGAATCACCG | + |
|
Preference number: 3 (lower is better) Translates to: EDQQNPRSLPLV*RKWVFALGESP Trigger: CGGTGATTCACCCAGAGCAAACACCCATTTGCGCCAGACAAGGGGCAGTGAACGCGGGTTCTGTTGATCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| 3UTR CCA 72 bp | CAGCTCACTGTTGTCTGTGTTTTCTGGGAACAGGAGTaGGGTGATGCCACAGCCATGTGGGGTGGCATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QLTVVCVFWEQE*GDATAMWGGIS Trigger: AGAGATGCCACCCCACATGGCTGTGGCATCACCCCACTCCTGTTCCCAGAAAACACAGACAACAGTGAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| 3UTR CCA 72 bp | GCGATCGTCCTGTCATGCTGGGCCCTTCATTTGATCTaGGACATAGCATCACAGCAGTCAGGGCACCTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: AIVLSCWALHLI*DIASQQSGHLD Trigger: ATCCAGGTGCCCTGACTGCTGTGATGCTATGTCCCAGATCAAATGAAGGGCCCAGCATGACAGGACGATCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| 3UTR TCA 72 bp | GATAGCAGGAATCAGGTCCTCCAGTGGTGTTGGCAATaGCAGCGCATGTTGGAGGCAGAGGCACTATGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: DSRNQVLQWCWQ*QRMLEAEALCG Trigger: ACCACATAGTGCCTCTGCCTCCAACATGCGCTGTCATTGCCAACACCACTGGAGGACCTGATTCCTGCTATC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| 3UTR TCA 72 bp | GATAACAGCAGCTCAGTTCTCACACCGAAGAGTCCCTaGTCCTGGGCACCTGAGAGAGTGGTGCTGAATACC | + |
|
Preference number: 3 (lower is better) Translates to: DNSSSVLTPKSP*SWAPERVVLNT Trigger: GGTATTCAGCACCACTCTCTCAGGTGCCCAGGATCAGGGACTCTTCGGTGTGAGAACTGAGCTGCTGTTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| 3UTR GCA 72 bp | TGGGTCCATCACTGCCAGCTCACCCTCCTGCTTATTTaGAGATGGAAGATCAACAGAACCCGCGTTCACTGC | + |
|
Preference number: 3 (lower is better) Translates to: WVHHCQLTLLLI*RWKINRTRVHC Trigger: GCAGTGAACGCGGGTTCTGTTGATCTTCCATCTGCAAATAAGCAGGAGGGTGAGCTGGCAGTGATGGACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| 3UTR GCA 72 bp | AATGTAAAGACTCTGCCTTTGCGAAGCCAGCTGCAGTaGTGTAGGCCCCCAAGTTCCCTAGCAAGCTGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: NVKTLPLRSQLQ*CRPPSSLASCQ Trigger: TTGGCAGCTTGCTAGGGAACTTGGGGGCCTACAGCACTGCAGCTGGCTTCGCAAAGGCAGAGTCTTTACATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| 3UTR CCA 72 bp | CCATCTCCTCACATCCTCCCTGGTAGATCTCCCACCTaGCTCTATCCCAGAATGCTTTCTCTCTCCCAGATG | + |
|
Preference number: 3 (lower is better) Translates to: PSPHILPGRSPT*LYPRMLSLSQM Trigger: CATCTGGGAGAGAGAAAGCATTCTGGGATAGAGCCAGGTGGGAGATCTACCAGGGAGGATGTGAGGAGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| 3UTR-3UTR CAA 90 bp | CCCCTGCCCTTCTGGAAAGTGGAGGGTGTAGATGACACCTGGTCTGAGTGGTGCGATCCAGAAGGTATTTaGTCAGCCCAGCTCCATATA | + |
|
Preference number: 3 (lower is better) Translates to: PLPFWKVEGVDDTWSEWCDPEGI*SAQLHI Trigger: TATATGGAGCTGGGCTGACAAAATACCTTCTGGATC...GCACCACTCAGACCAGGTGTCATCTACACCCTCCACTTTCCAGAAGGGCAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105895.2 ENSMUST00000128057.8 |
||
| 3UTR TCA 72 bp | GCTGACCTCAAACTGAGAGATCTGCCTACTATCTCTTaGGCACTGGGATTAAAGGCGTGCACCACCAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: ADLKLRDLPTIS*ALGLKACTTST Trigger: GGTGCTGGTGGTGCACGCCTTTAATCCCAGTGCTCAAGAGATAGTAGGCAGATCTCTCAGTTTGAGGTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| 3UTR GCA 72 bp | ATTTGCAGATGGAAGATCAACAGAACCCGCGTTCACTaGCCCTTGTCTGGCGCAAATGGGTGTTTGCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: ICRWKINRTRVH*PLSGANGCLLW Trigger: CCAGAGCAAACACCCATTTGCGCCAGACAAGGGGCAGTGAACGCGGGTTCTGTTGATCTTCCATCTGCAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| 3UTR CCA 72 bp | CAGGGAAGAGGCCAAGCTGGTCCTCCCACAGAACAATaGATTCCTCTCAGGCTTGCCTTTAATCACTGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: QGRGQAGPPTEQ*IPLRLAFNHCD Trigger: GTCACAGTGATTAAAGGCAAGCCTGAGAGGAATCCATTGTTCTGTGGGAGGACCAGCTTGGCCTCTTCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| 3UTR CCA 72 bp | CTGCCCTTCTGGAAAGTGGAGGGTGTAGATGACACCTaGTCTGAGTGGTGCCACCCAATGATGAAAGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LPFWKVEGVDDT*SEWCHPMMKAE Trigger: TTCTGCTTTCATCATTGGGTGGCACCACTCAGACCAGGTGTCATCTACACCCTCCACTTTCCAGAAGGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105895.2 ENSMUST00000128057.8 |
||
| 3UTR GCA 72 bp | AAAGTGGAGGGTGTAGATGACACCTGGTCTGAGTGGTaGCACCCAATGATGAAAGCAGAAAGAGATGGACGG | + |
|
Preference number: 3 (lower is better) Translates to: KVEGVDDTWSEW*HPMMKAERDGR Trigger: CCGTCCATCTCTTTCTGCTTTCATCATTGGGTGGCACCACTCAGACCAGGTGTCATCTACACCCTCCACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105895.2 ENSMUST00000128057.8 |
||
| 3UTR CCA 72 bp | GTACAGTGTCACCAGGCAAGCCCTACACATTCACAGTaGCGGCCACCAATTAGTCCTGCTTTGGTTTCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: VQCHQASPTHSQ*RPPISPALVSN Trigger: ATTGGAAACCAAAGCAGGACTAATTGGTGGCCGCCACTGTGAATGTGTAGGGCTTGCCTGGTGACACTGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| 3UTR CCA 72 bp | GTGACCTTGCCAGGCGACCTACTCAATGAGAGTATATaGGAACACCAGAGCCAGAGGTGGCTTATGAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: VTLPGDLLNESI*EHQSQRWLMKT Trigger: TGTCTTCATAAGCCACCTCTGGCTCTGGTGTTCCCATATACTCTCATTGAGTAGGTCGCCTGGCAAGGTCAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105895.2 ENSMUST00000128057.8 |
||
| 3UTR CCA 72 bp | AATCTGCCCTGTGACATGAAAGGCTTTGAGGGGCTCTaGCTGGTGGCCAGGTTGGCTTTTTGTATTTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: NLPCDMKGFEGL*LVARLAFCISG Trigger: ACCAGAAATACAAAAAGCCAACCTGGCCACCAGCCAGAGCCCCTCAAAGCCTTTCATGTCACAGGGCAGATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTGCCACCCAATGATGAAAGCAGAAAGAGATGGACGGAGAGAAGCCCACAGGATCCAGAAGGTATTTaGTCAGCCCAGCTCCATATA | + |
|
Preference number: 3 (lower is better) Translates to: VVPPNDESRKRWTERSPQDPEGI*SAQLHI Trigger: TATATGGAGCTGGGCTGACAAAATACCTTCTGGATC...CTGTGGGCTTCTCTCCGTCCATCTCTTTCTGCTTTCATCATTGGGTGGCACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105895.2 ENSMUST00000128057.8 |
||
| 3UTR TCA 72 bp | GAAAGCAGAAAGAGATGGACGGAGAGAAGCCCACAGTaGCCTTGCCAGGCGACCTACTCAATGAGAGTATAT | + |
|
Preference number: 3 (lower is better) Translates to: ESRKRWTERSPQ*PCQATYSMRVY Trigger: ATATACTCTCATTGAGTAGGTCGCCTGGCAAGGTCACTGTGGGCTTCTCTCCGTCCATCTCTTTCTGCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105895.2 ENSMUST00000128057.8 |
||
| 3UTR CCA 72 bp | TGGAAAGTGGAGGGTGTAGATGACACCTGGTCTGAGTaGTGCCACCCAATGATGAAAGCAGAAAGAGATGGA | + |
|
Preference number: 3 (lower is better) Translates to: WKVEGVDDTWSE*CHPMMKAERDG Trigger: TCCATCTCTTTCTGCTTTCATCATTGGGTGGCACCACTCAGACCAGGTGTCATCTACACCCTCCACTTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105895.2 ENSMUST00000128057.8 |
||
| 3UTR GCA 72 bp | CTCTCTATGAAATGCCTGAGAGCACTGTGCCACTCCTaGCAGCTCGTCTTATATCTGCCTGTAAATACCATG | + |
|
Preference number: 3 (lower is better) Translates to: LSMKCLRALCHS*QLVLYLPVNTM Trigger: CATGGTATTTACAGGCAGATATAAGACGAGCTGGCAGGAGTGGCACAGTGCTCTCAGGCATTTCATAGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| 3UTR CCA 72 bp | AACCCATTTATTTTAACCTGCATTCTGCCAGCTGGCTaGTTACCTGTGCTCAGGTACCATGTGTCCATCTCC | + |
|
Preference number: 3 (lower is better) Translates to: NPFILTCILPAG*LPVLRYHVSIS Trigger: GGAGATGGACACATGGTACCTGAGCACAGGTAACCAGCCAGCTGGCAGAATGCAGGTTAAAATAAATGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| 3UTR GCA 72 bp | AAAGATATTCTCTCTATGAAATGCCTGAGAGCACTGTaGCACTCCTGCCAGCTCGTCTTATATCTGCCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: KDILSMKCLRAL*HSCQLVLYLPV Trigger: TACAGGCAGATATAAGACGAGCTGGCAGGAGTGGCACAGTGCTCTCAGGCATTTCATAGAGAGAATATCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| 3UTR CCA 72 bp | CACATTCACAGTGGCGGCCACCAATTAGTCCTGCTTTaGTTTCCAATAGTTCCCCTAATGCCACTTTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: HIHSGGHQLVLL*FPIVPLMPLFV Trigger: AACAAAAAGTGGCATTAGGGGAACTATTGGAAACCAAAGCAGGACTAATTGGTGGCCGCCACTGTGAATGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| 3UTR TCA 72 bp | AGAGTATATGGGAACACCAGAGCCAGAGGTGGCTTATaGAGACACAGTACTCATCTTGTACCAAATTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RVYGNTRARGGL*RHSTHLVPNCL Trigger: CAGACAATTTGGTACAAGATGAGTACTGTGTCTTCATAAGCCACCTCTGGCTCTGGTGTTCCCATATACTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105895.2 ENSMUST00000128057.8 |
||
| 3UTR CCA 72 bp | ATGACTAGTATTGTTTCCAAACCCTGTGGGGACAGGTaGCTTTTAGACATCATCTTCTACAAGGTAGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: MTSIVSKPCGDR*LLDIIFYKVAF Trigger: AAAAGCTACCTTGTAGAAGATGATGTCTAAAAGCCACCTGTCCCCACAGGGTTTGGAAACAATACTAGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105895.2 ENSMUST00000128057.8 |
||
| 3UTR TCA 72 bp | GTTTGTTTGGTTTTGAATTCACTTTGTAGACTAGGCTaGCCTCAAACTGAGAGATCTGCCTACTATCTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: VCLVLNSLCRLG*PQTERSAYYLL Trigger: CAAGAGATAGTAGGCAGATCTCTCAGTTTGAGGTCAGCCTAGTCTACAAAGTGAATTCAAAACCAAACAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| CDS-3UTR CCA 90 bp | GGGCATGGGGCCGTCAGCATTCCAGGAAATGGCCAAAGGGCATTGAGGTGGAAGCATGAGGAAATCCGCTaGGGTGCAGCAGCCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GHGAVSIPGNGQRALRWKHEEIR*GAAARQ Trigger: CTGCCTGGCTGCTGCACCCCAGCGGATTTCCTCATG...CTTCCACCTCAATGCCCTTTGGCCATTTCCTGGAATGCTGACGGCCCCATGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105895.2 |
||
| 3UTR CAA 72 bp | CAGGGCCACTCACTCTGGCCAGTGACAAGCGGTCTTTaGAGTGTGTTGCCCCTGTGCAGAAGGCAGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QGHSLWPVTSGL*SVLPLCRRQGG Trigger: ACCACCCTGCCTTCTGCACAGGGGCAACACACTCAAAAGACCGCTTGTCACTGGCCAGAGTGAGTGGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| CDS-3UTR GCA 90 bp | GCCGGGTCCACAGTCACATGGCATCCAGGAGAATGGGCATGGGGCCGTCAGCATCGATCCCCAAGCTACTaGCTTCTTCATAGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AGSTVTWHPGEWAWGRQHRSPSY*LLHSLP Trigger: AGGAAGGCTATGAAGAAGGCAGTAGCTTGGGGATCG...ATGCTGACGGCCCCATGCCCATTCTCCTGGATGCCATGTGACTGTGGACCCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105895.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCATGGGGCCGTCAGCATTCCAGGAAATGGCCAAAGGGCATTGAGGTGGAAGCCAGTGCAGCAGAGTaGTACTGCCTGAACTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: WAWGRQHSRKWPKGIEVEASAAE*YCLNFP Trigger: AGGGAAGTTCAGGCAGTACCACTCTGCTGCACTGGC...TTCCACCTCAATGCCCTTTGGCCATTTCCTGGAATGCTGACGGCCCCATGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105895.2 |
||
| 3UTR CAA 72 bp | TCACTCTGGCCAGTGACAAGCGGTCTTTTGAGTGTGTaGCCCCTGTGCAGAAGGCAGGGTGGTCAGGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLWPVTSGLLSV*PLCRRQGGQVS Trigger: GCTTACCTGACCACCCTGCCTTCTGCACAGGGGCAACACACTCAAAAGACCGCTTGTCACTGGCCAGAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| 3UTR CAA 72 bp | GGCCCTGCTTCAGCTTCCTCCCTTGTCTCGTCACCCTaGTTTTCTCAGCTGGGCATCCAGAGGCAAACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GPASASSLVSSP*FSQLGIQRQTK Trigger: CTTGGTTTGCCTCTGGATGCCCAGCTGAGAAAACAAGGGTGACGAGACAAGGGAGGAAGCTGAAGCAGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| 3UTR CAA 72 bp | AGGAGCAGCATGAAGGCCCTGCTTCAGCTTCCTCCCTaGTCTCGTCACCCTTGTTTTCTCAGCTGGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RSSMKALLQLPP*SRHPCFLSWAS Trigger: GGATGCCCAGCTGAGAAAACAAGGGTGACGAGACAAGGGAGGAAGCTGAAGCAGGGCCTTCATGCTGCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| 3UTR CAA 72 bp | CGCGTTCACTGCCCCTTGTCTGGCGCAAATGGGTGTTaGCTCTGGGTGAATCACCGTTTCTTAGGTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RVHCPLSGANGC*LWVNHRFLGAA Trigger: GGCAGCACCTAAGAAACGGTGATTCACCCAGAGCAAACACCCATTTGCGCCAGACAAGGGGCAGTGAACGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| CDS-3UTR TCA 90 bp | AGTGACAAGCGGTCTTTTGAGTGTGTTGCCCCTGTGCAGAAGGCAGGGTGGTCACTGCACGTTGAGCAGTaGGCACAGCTGCCTGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SDKRSFECVAPVQKAGWSLHVEQ*AQLPEL Trigger: AAGTTCAGGCAGCTGTGCTCACTGCTCAACGTGCAG...TGACCACCCTGCCTTCTGCACAGGGGCAACACACTCAAAAGACCGCTTGTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| CDS-3UTR GCA 90 bp | GATGACACCTGGTCTGAGTGGTGCCACCCAATGATGAAAGCAGAAAGAGATGGAGGAAATCCGCTGGGGTaGAGCAGCCAGGCAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DDTWSEWCHPMMKAERDGGNPLG*SSQAAS Trigger: ACTGGCTGCCTGGCTGCTGCACCCCAGCGGATTTCC...TCCATCTCTTTCTGCTTTCATCATTGGGTGGCACCACTCAGACCAGGTGTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105895.2 ENSMUST00000128057.8 |
||
| CDS-3UTR CCA 90 bp | CATCTCTGGCCCTGGCACCAACCTGGGATTCCCAAGGGGAAGGGTGTATGCAAGCAAAGGGCATTGAGGTaGAAGAGTGCTTTCCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HLWPWHQPGIPKGKGVCKQRALR*KSAFPL Trigger: AAGGGGGAAAGCACTCTTCCACCTCAATGCCCTTTG...CTTGCATACACCCTTCCCCTTGGGAATCCCAGGTTGGTGCCAGGGCCAGAGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| CDS-3UTR CCA 90 bp | CTAGCAAGCTGCCAAACCAAAACGGGCACCACCAGCTCAGCTGAGGCATCCCAGTCTCAGACCCAATCTTaGCTCCATGTACCATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LASCQTKTGTTSSAEASQSQTQS*LHVPCH Trigger: ATGGCATGGTACATGGAGCCAAGATTGGGTCTGAGA...CTGGGATGCCTCAGCTGAGCTGGTGGTGCCCGTTTTGGTTTGGCAGCTTGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| CDS-3UTR CCA 90 bp | TCACTTCTAAGCCATAAGGTATCCTCCACCTCTGGGGCTGCCAGAGGGATGGAGAAGTCCAGAGCCTCCTaGAGTCACCTTGAAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLSHKVSSTSGAARGMEKSRAS*SHLEVW Trigger: CCAGACTTCAAGGTGACTCCAGGAGGCTCTGGACTT...CTCCATCCCTCTGGCAGCCCCAGAGGTGGAGGATACCTTATGGCTTAGAAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| 3UTR CAA 72 bp | CTGGGTCCATCACTGCCAGCTCACCCTCCTGCTTATTaGCAGATGGAAGATCAACAGAACCCGCGTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LGPSLPAHPPAY*QMEDQQNPRSL Trigger: CAGTGAACGCGGGTTCTGTTGATCTTCCATCTGCAAATAAGCAGGAGGGTGAGCTGGCAGTGATGGACCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| 3UTR CAA 72 bp | CTGGCTGGTGGCCAGGTTGGCTTTTTGTATTTCTGGTaGACACACCATGGCGCTTCCCAGCACAGACATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LAGGQVGFLYFW*THHGASQHRHV Trigger: CACATGTCTGTGCTGGGAAGCGCCATGGTGTGTCAACCAGAAATACAAAAAGCCAACCTGGCCACCAGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| CDS-3UTR GCA 90 bp | CATTCTGCCAGCTGGCTGGTTACCTGTGCTCAGGTACCATGTGTCCATCTCCTCCGATCCCCAAGCTACTaGCTTCTTCATAGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HSASWLVTCAQVPCVHLLRSPSY*LLHSLP Trigger: AGGAAGGCTATGAAGAAGGCAGTAGCTTGGGGATCG...GAGGAGATGGACACATGGTACCTGAGCACAGGTAACCAGCCAGCTGGCAGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| CDS-3UTR GCA 90 bp | GCTTCAGCTTCCTCCCTTGTCTCGTCACCCTTGTTTTCTCAGCTGGGCATCCAGAGCAGTGAGCACAGCTaGCTGAACTTCCCTCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: ASASSLVSSPLFSQLGIQSSEHS*LNFPLI Trigger: AATCAGAGGGAAGTTCAGGCAGCTGTGCTCACTGCT...CTGGATGCCCAGCTGAGAAAACAAGGGTGACGAGACAAGGGAGGAAGCTGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| CDS-3UTR CCA 90 bp | GGTCCTCCAGTGGTGTTGGCAATGACAGCGCATGTTGGAGGCAGAGGCACTATGTCTCAGACCCAATCTTaGCTCCATGTACCATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GPPVVLAMTAHVGGRGTMSQTQS*LHVPCH Trigger: ATGGCATGGTACATGGAGCCAAGATTGGGTCTGAGA...CATAGTGCCTCTGCCTCCAACATGCGCTGTCATTGCCAACACCACTGGAGGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| 3UTR CAA 72 bp | AGATGGAAGATCAACAGAACCCGCGTTCACTGCCCCTaGTCTGGCGCAAATGGGTGTTTGCTCTGGGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RWKINRTRVHCP*SGANGCLLWVN Trigger: ATTCACCCAGAGCAAACACCCATTTGCGCCAGACAAGGGGCAGTGAACGCGGGTTCTGTTGATCTTCCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| CDS-3UTR TCA 90 bp | TGGCAGGATCCAGAAGGTATTTTGTCAGCCCAGCTCCATATAAGCATCCGAGCCATGGCCAAAGGGCATTaGGGTGGAAGAGTGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WQDPEGILSAQLHISIRAMAKGH*GGRVLS Trigger: GGAAAGCACTCTTCCACCTCAATGCCCTTTGGCCAT...GGCTCGGATGCTTATATGGAGCTGGGCTGACAAAATACCTTCTGGATCCTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| CDS-3UTR GCA 90 bp | ATGAAAGCAGAAAGAGATGGACGGAGAGAAGCCCACAGTGACCTTGCCAGGCGACGATCCCCAAGCTACTaGCTTCTTCATAGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MKAERDGRREAHSDLARRRSPSY*LLHSLP Trigger: AGGAAGGCTATGAAGAAGGCAGTAGCTTGGGGATCG...TCGCCTGGCAAGGTCACTGTGGGCTTCTCTCCGTCCATCTCTTTCTGCTTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105895.2 ENSMUST00000128057.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGGGTTCTAATGGAATGGATGGGGATGTCCACACACGCATTCAGATGGCTGGAAGGGATCCTTTGGTaGCAGCTGGTGTTTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GGVLMEWMGMSTHAFRWLEGILW*QLVFGS Trigger: ACTTCCAAACACCAGCTGGCACCAAAGGATCCCTTC...CAGCCATCTGAATGCGTGTGTGGACATCCCCATCCATTCCATTAGAACCCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207453.2 |
||
| CDS-3UTR CCA 90 bp | AGTCACATGGCATCCAGGAGAATGGGCATGGGGCCGTCAGCATTCCAGGAAATGTCTCAGACCCAATCTTaGCTCCATGTACCATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SHMASRRMGMGPSAFQEMSQTQS*LHVPCH Trigger: ATGGCATGGTACATGGAGCCAAGATTGGGTCTGAGA...CATTTCCTGGAATGCTGACGGCCCCATGCCCATTCTCCTGGATGCCATGTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105895.2 |
||
| CDS-3UTR CCA 90 bp | TATATGGGAACACCAGAGCCAGAGGTGGCTTATGAAGACACAGTACTCATCTTGCATGAGGAAATCCGCTaGGGTGCAGCAGCCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YMGTPEPEVAYEDTVLILHEEIR*GAAARQ Trigger: CTGCCTGGCTGCTGCACCCCAGCGGATTTCCTCATG...CAAGATGAGTACTGTGTCTTCATAAGCCACCTCTGGCTCTGGTGTTCCCATATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105895.2 ENSMUST00000128057.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGGTTCTAATGGAATGGATGGGGATGTCCACACACGCATTCAGATGGCTTCCTTTGGTGCCAGCTaGTGTTTGGAAGTAGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: GRGSNGMDGDVHTRIQMASFGAS*CLEVGT Trigger: GGTTCCTACTTCCAAACACCAGCTGGCACCAAAGGA...AGCCATCTGAATGCGTGTGTGGACATCCCCATCCATTCCATTAGAACCCCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207453.2 |
||
| CDS-3UTR TCA 90 bp | CTAATGGAATGGATGGGGATGTCCACACACGCATTCAGATGGCTGTACAACAGGTCTGTCCTGCAAAGTTaGAGGGATCCTTTGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LMEWMGMSTHAFRWLYNRSVLQS*RDPLVP Trigger: TGGCACCAAAGGATCCCTTCAACTTTGCAGGACAGA...CCTGTTGTACAGCCATCTGAATGCGTGTGTGGACATCCCCATCCATTCCATTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207453.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCAGAGGCTCAGCAGGCAGCAAAGATCTTATCACGGCTTCCCATGACCCATGGAGCTTCTCATAAGTaGGATCATCGTAAGGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PAEAQQAAKILSRLPMTHGASHK*DHRKES Trigger: ACTTTCCTTACGATGATCCCACTTATGAGAAGCTCC...ATGGGTCATGGGAAGCCGTGATAAGATCTTTGCTGCCTGCTGAGCCTCTGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| CDS-3UTR GCA 90 bp | GGGGTTCTAATGGAATGGATGGGGATGTCCACACACGCATTCAGATGGCTGTACCATGATGGCATTACCTaGCTGAACTTCCCTCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: GVLMEWMGMSTHAFRWLYHDGIT*LNFPLI Trigger: AATCAGAGGGAAGTTCAGGCAGGTAATGCCATCATG...GTACAGCCATCTGAATGCGTGTGTGGACATCCCCATCCATTCCATTAGAACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207453.2 |
||
| CDS-3UTR CCA 90 bp | ATGAAAGCAGAAAGAGATGGACGGAGAGAAGCCCACAGTGACCTTGCCAGGCGAGGAGCTTCTCATAAGTaGGATCATCGTAAGGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: MKAERDGRREAHSDLARRGASHK*DHRKES Trigger: ACTTTCCTTACGATGATCCCACTTATGAGAAGCTCC...TCGCCTGGCAAGGTCACTGTGGGCTTCTCTCCGTCCATCTCTTTCTGCTTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105895.2 |
||
| 3UTR CAA 72 bp | CTGGTCCTCCCACAGAACAATGGATTCCTCTCAGGCTaGCCTTTAATCACTGTGACACTTAATGTGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LVLPQNNGFLSG*PLITVTLNVQT Trigger: TGTCTGCACATTAAGTGTCACAGTGATTAAAGGCAAGCCTGAGAGGAATCCATTGTTCTGTGGGAGGACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| 3UTR CAA 72 bp | ACACATTCACAGTGGCGGCCACCAATTAGTCCTGCTTaGGTTTCCAATAGTTCCCCTAATGCCACTTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: THSQWRPPISPA*VSNSSPNATFC Trigger: ACAAAAAGTGGCATTAGGGGAACTATTGGAAACCAAAGCAGGACTAATTGGTGGCCGCCACTGTGAATGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
||
| CDS GCA 90 bp | TCTGCCCACCTCTCATCCGCCATCACGACGGCGTCAAATATGTCCTaGTCCACGGCCATGGCGGTGTCTCGGCTCTCCCCCGGCCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SAHLSSAITTASNMS*STAMAVSRLSPGPR Trigger: GCGAGGGCCGGGGGAGAGCCGAGACACCGCCATGGCCGTGGAGCAGGACATATTTGACGCCGTCGTGATGGCGGATGAGAGGTGGGCAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141737.2 |
||
| CDS GCA 90 bp | CCATGGAATCTCTCATCCGCCATCACGACGGCGTCAAATATGTCCTaGTCCACGGCCATGGCGGTGTCTCGGCTCTCCCCCGGCCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: PWNLSSAITTASNMS*STAMAVSRLSPGPR Trigger: GCGAGGGCCGGGGGAGAGCCGAGACACCGCCATGGCCGTGGAGCAGGACATATTTGACGCCGTCGTGATGGCGGATGAGAGATTCCATGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033388.12 ENSMUST00000105895.2 ENSMUST00000128057.8 |
||
| CDS GCA 90 bp | CCGCTGGGGTGCAGCAGCCAGGCAGCCAGTGCAGCAGAGTGGTACTaGCTGAACTTCCCTCTGATTCTGTCCAGGTCTTCATGGAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PLGCSSQAASAAEWY*LNFPLILSRSSWSF Trigger: GAAGCTCCATGAAGACCTGGACAGAATCAGAGGGAAGTTCAGGCAGTACCACTCTGCTGCACTGGCTGCCTGGCTGCTGCACCCCAGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105895.2 |
||
| CDS CCA 90 bp | GTATGTGCGGCAATTAAAGGACAAGAAAAAGTGGCAGCTCGCAGATaGCGAAGGCGGGTATCCCCGAGGACTGCCCAGCAGCTGCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VCAAIKGQEKVAARR*RRRVSPRTAQQLPG Trigger: CCCCGGCAGCTGCTGGGCAGTCCTCGGGGATACCCGCCTTCGCCATCTGCGAGCTGCCACTTTTTCTTGTCCTTTAATTGCCGCACATAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141737.2 |
||
| CDS TCA 90 bp | GTTCTTAGAAGCACTGGGGAGCGAGCTTATCGTGTCCAGGTAGGCTaGCATGAGGAAATCCGCTGGGGTGCAGCAGCCAGGCAGCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VLRSTGERAYRVQVG*HEEIRWGAAARQPV Trigger: CACTGGCTGCCTGGCTGCTGCACCCCAGCGGATTTCCTCATGTCAGCCTACCTGGACACGATAAGCTCGCTCCCCAGTGCTTCTAAGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
||
| CDS GCA 90 bp | GCTGACATGAGGAAATCCGCTGGGGTGCAGCAGCCAGGCAGCCAGTaGAGCAGAGTGGTACTGCCTGAACTTCCCTCTGATTCTGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ADMRKSAGVQQPGSQ*SRVVLPELPSDSVQ Trigger: CTGGACAGAATCAGAGGGAAGTTCAGGCAGTACCACTCTGCTGCACTGGCTGCCTGGCTGCTGCACCCCAGCGGATTTCCTCATGTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105895.2 |
||
| CDS GCA 90 bp | GCTGACATGAGGAAATCCGCTGGGGTGCAGCAGCCAGGCAGCCAGTaGAGCAGAGTGGTACTGTCTTTTTCACCAGCGCCACTGTGTAGG | + |
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Preference number: 5 (lower is better) Translates to: ADMRKSAGVQQPGSQ*SRVVLSFSPAPLCR Trigger: CCTACACAGTGGCGCTGGTGAAAAAGACAGTACCACTCTGCTGCACTGGCTGCCTGGCTGCTGCACCCCAGCGGATTTCCTCATGTCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
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| CDS CCA 90 bp | GGAAATCCGCTGGGGTGCAGCAGCCAGGCAGCCAGTGCAGCAGAGTaGTACTGCCTGAACTTCCCTCTGATTCTGTCCAGGTCTTCATGG | + |
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Preference number: 5 (lower is better) Translates to: GNPLGCSSQAASAAE*YCLNFPLILSRSSW Trigger: CCATGAAGACCTGGACAGAATCAGAGGGAAGTTCAGGCAGTACCACTCTGCTGCACTGGCTGCCTGGCTGCTGCACCCCAGCGGATTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105895.2 |
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| CDS CCA 90 bp | GGAAATCCGCTGGGGTGCAGCAGCCAGGCAGCCAGTGCAGCAGAGTaGTACTGTCTTTTTCACCAGCGCCACTGTGTAGGAGACACTTCC | + |
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Preference number: 5 (lower is better) Translates to: GNPLGCSSQAASAAE*YCLFHQRHCVGDTS Trigger: GGAAGTGTCTCCTACACAGTGGCGCTGGTGAAAAAGACAGTACCACTCTGCTGCACTGGCTGCCTGGCTGCTGCACCCCAGCGGATTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
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| CDS GCA 90 bp | CAAAACGCAAGTCCAGAGCCTCCTGGAGTCACCTTGAAGTCTGGCTaGACGTTGAGCAGTGAGCACAGCTGCCTGAACTTCCCTCTGATT | + |
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Preference number: 5 (lower is better) Translates to: QNASPEPPGVTLKSG*TLSSEHSCLNFPLI Trigger: AATCAGAGGGAAGTTCAGGCAGCTGTGCTCACTGCTCAACGTGCAGCCAGACTTCAAGGTGACTCCAGGAGGCTCTGGACTTGCGTTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
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| CDS-3UTR CAA 90 bp | GCTCTATCCCAGAATGCTTTCTCTCTCCCAGATGTTCCGCCTATTTCCTGCCTACCTCCTGGAGTCACCTaGAAGTCTGGCTGCACGTTG | + |
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Preference number: 5 (lower is better) Translates to: ALSQNAFSLPDVPPISCLPPGVT*KSGCTL Trigger: CAACGTGCAGCCAGACTTCAAGGTGACTCCAGGAGG...TAGGCAGGAAATAGGCGGAACATCTGGGAGAGAGAAAGCATTCTGGGATAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
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| CDS CCA 90 bp | TTCTCGCACCACCGGGATCTGTCCTGCAAAGTTGAAGGGATCCTTTaGTGCCAGCTGGTGTTTGGAAGTAGGAACCATGATGGCATTACC | + |
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Preference number: 5 (lower is better) Translates to: FSHHRDLSCKVEGIL*CQLVFGSRNHDGIT Trigger: GGTAATGCCATCATGGTTCCTACTTCCAAACACCAGCTGGCACCAAAGGATCCCTTCAACTTTGCAGGACAGATCCCGGTGGTGCGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207453.2 |
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| CDS GCA 90 bp | TGGTGCCAGCTGGTGTTTGGAAGTAGGAACCATGATGGCATTACCTaGCTGAACTTCCCTCTGATTCTGTCCAGGTCTTCATGGAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: WCQLVFGSRNHDGIT*LNFPLILSRSSWSF Trigger: GAAGCTCCATGAAGACCTGGACAGAATCAGAGGGAAGTTCAGGCAGGTAATGCCATCATGGTTCCTACTTCCAAACACCAGCTGGCACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207453.2 |
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| CDS-3UTR CAA 90 bp | AAGACTCCTGTGATGTCTTCGGGGTGGCAGTTACTCATGACTAGTATTGTTTCCAATGGCCAAAGGGCATaGAGGTGGAAGAGTGCTTTC | + |
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Preference number: 5 (lower is better) Translates to: KTPVMSSGWQLLMTSIVSNGQRA*RWKSAF Trigger: GAAAGCACTCTTCCACCTCAATGCCCTTTGGCCATT...GGAAACAATACTAGTCATGAGTAACTGCCACCCCGAAGACATCACAGGAGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
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| CDS CCA 72 bp | TCACGACGGCGTCAAATATGTCCTGCTCCACGGCCATaGCGGTGTCTCGGCTCTCCCCCGGCCCTCGCATTC | + |
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Preference number: 6 (lower is better) Translates to: SRRRQICPAPRP*RCLGSPPALAF Trigger: GAATGCGAGGGCCGGGGGAGAGCCGAGACACCGCCATGGCCGTGGAGCAGGACATATTTGACGCCGTCGTGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033388.12 ENSMUST00000105895.2 ENSMUST00000128057.8 ENSMUST00000141737.2 |
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| CDS CCA 72 bp | ATGGAATCTGGGCCACCGTCCCGCCCAGGCGTTCCCTaGGGACTTTTCAGGATCCAAAGGGGCCTGCCCGAC | + |
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Preference number: 6 (lower is better) Translates to: MESGPPSRPGVP*GLFRIQRGLPD Trigger: GTCGGGCAGGCCCCTTTGGATCCTGAAAAGTCCCCAGGGAACGCCTGGGCGGGACGGTGGCCCAGATTCCAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141737.2 |
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| CDS GCA 72 bp | CTCTCATCCGCCATCACGACGGCGTCAAATATGTCCTaGTCCACGGCCATGGCGGTGTCTCGGCTCTCCCCC | + |
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Preference number: 6 (lower is better) Translates to: LSSAITTASNMS*STAMAVSRLSP Trigger: GGGGGAGAGCCGAGACACCGCCATGGCCGTGGAGCAGGACATATTTGACGCCGTCGTGATGGCGGATGAGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033388.12 ENSMUST00000105895.2 ENSMUST00000128057.8 ENSMUST00000141737.2 |
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| CDS TCA 72 bp | TGGGGAGCGAGCTTATCGTGTCCAGGTAGGCTGACATaGGGAAATCCGCTGGGGTGCAGCAGCCAGGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: WGASLSCPGRLT*GNPLGCSSQAA Trigger: GGCTGCCTGGCTGCTGCACCCCAGCGGATTTCCTCATGTCAGCCTACCTGGACACGATAAGCTCGCTCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105895.2 ENSMUST00000128057.8 |
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| CDS GCA 72 bp | AGGAAATCCGCTGGGGTGCAGCAGCCAGGCAGCCAGTaGAGCAGAGTGGTACTGCCTGAACTTCCCTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: RKSAGVQQPGSQ*SRVVLPELPSD Trigger: ATCAGAGGGAAGTTCAGGCAGTACCACTCTGCTGCACTGGCTGCCTGGCTGCTGCACCCCAGCGGATTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105895.2 |
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| CDS GCA 72 bp | AGGAAATCCGCTGGGGTGCAGCAGCCAGGCAGCCAGTaGAGCAGAGTGGTACTGTCTTTTTCACCAGCGCCA | + |
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Preference number: 6 (lower is better) Translates to: RKSAGVQQPGSQ*SRVVLSFSPAP Trigger: TGGCGCTGGTGAAAAAGACAGTACCACTCTGCTGCACTGGCTGCCTGGCTGCTGCACCCCAGCGGATTTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
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| CDS CAA 90 bp | GCAAGTCCAGAGCCTCCTGGAGTCACCTTGAAGTCTGGCTGCACGTaGAGCAGTGAGCACAGCTGCCTGAACTTCCCTCTGATTCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: ASPEPPGVTLKSGCT*SSEHSCLNFPLILS Trigger: GGACAGAATCAGAGGGAAGTTCAGGCAGCTGTGCTCACTGCTCAACGTGCAGCCAGACTTCAAGGTGACTCCAGGAGGCTCTGGACTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
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| CDS GCA 72 bp | AGTCCAGAGCCTCCTGGAGTCACCTTGAAGTCTGGCTaGACGTTGAGCAGTGAGCACAGCTGCCTGAACTTC | + |
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Preference number: 6 (lower is better) Translates to: SPEPPGVTLKSG*TLSSEHSCLNF Trigger: GAAGTTCAGGCAGCTGTGCTCACTGCTCAACGTGCAGCCAGACTTCAAGGTGACTCCAGGAGGCTCTGGACT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
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| CDS GCA 72 bp | TGCAGCAGCCAGGCAGCCAGTGCAGCAGAGTGGTACTaGCTGAACTTCCCTCTGATTCTGTCCAGGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: CSSQAASAAEWY*LNFPLILSRSS Trigger: TGAAGACCTGGACAGAATCAGAGGGAAGTTCAGGCAGTACCACTCTGCTGCACTGGCTGCCTGGCTGCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105895.2 |
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| CDS CCA 72 bp | GCAATTAAAGGACAAGAAAAAGTGGCAGCTCGCAGATaGCGAAGGCGGGTATCCCCGAGGACTGCCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: AIKGQEKVAARR*RRRVSPRTAQQ Trigger: CTGCTGGGCAGTCCTCGGGGATACCCGCCTTCGCCATCTGCGAGCTGCCACTTTTTCTTGTCCTTTAATTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141737.2 |
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| CDS GCA 72 bp | GCAGCGCAATCAGAGCCTCCACCACCTTCATCTTCCTaGTGTCTTTTTCACCAGCGCCACTGTGTAGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: AAQSEPPPPSSS*CLFHQRHCVGD Trigger: GTCTCCTACACAGTGGCGCTGGTGAAAAAGACAGCAGGAAGATGAAGGTGGTGGAGGCTCTGATTGCGCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033388.12 ENSMUST00000105895.2 |
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| CDS GCA 72 bp | GAGAGAACTCTGTTCTCGCACCACCGGGATCTGTCCTaGAAAGTTGAAGGGATCCTTTGGTGCCAGCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: ERTLFSHHRDLS*KVEGILWCQLV Trigger: CACCAGCTGGCACCAAAGGATCCCTTCAACTTTGCAGGACAGATCCCGGTGGTGCGAGAACAGAGTTCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207453.2 |
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| CDS TCA 72 bp | TGGAGTCACCTTGAAGTCTGGCTGCACGTTGAGCAGTaGGCACAGCTGCCTGAACTTCCCTCTGATTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: WSHLEVWLHVEQ*AQLPELPSDSV Trigger: GACAGAATCAGAGGGAAGTTCAGGCAGCTGTGCTCACTGCTCAACGTGCAGCCAGACTTCAAGGTGACTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033388.12 |
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| CDS GCA 72 bp | TCCAGGAAATGGCCAAAGGGCATTGAGGTGGAAGAGTaGTTTCCCCCTTGGTTCTTAGAAGCACTGGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SRKWPKGIEVEE*FPPWFLEALGS Trigger: GCTCCCCAGTGCTTCTAAGAACCAAGGGGGAAAGCACTCTTCCACCTCAATGCCCTTTGGCCATTTCCTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128057.8 |
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| CDS CAA 72 bp | CTCTGTTCTCGCACCACCGGGATCTGTCCTGCAAAGTaGAAGGGATCCTTTGGTGCCAGCTGGTGTTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: LCSRTTGICPAK*KGSFGASWCLE Trigger: TTCCAAACACCAGCTGGCACCAAAGGATCCCTTCAACTTTGCAGGACAGATCCCGGTGGTGCGAGAACAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207453.2 |
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| CDS CCA 72 bp | CAAAACCCCGGTAGCATCCAATCTCAGACCCAATCTTaGCTCCATGTACCATGCCATACCGCTTTCCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: QNPGSIQSQTQS*LHVPCHTAFLQ Trigger: TTGAAGGAAAGCGGTATGGCATGGTACATGGAGCCAAGATTGGGTCTGAGATTGGATGCTACCGGGGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033388.12 ENSMUST00000105895.2 ENSMUST00000128057.8 |
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| CDS GCA 72 bp | CTGGTGTTTGGAAGTAGGAACCATGATGGCATTACCTaGCTGAACTTCCCTCTGATTCTGTCCAGGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: LVFGSRNHDGIT*LNFPLILSRSS Trigger: TGAAGACCTGGACAGAATCAGAGGGAAGTTCAGGCAGGTAATGCCATCATGGTTCCTACTTCCAAACACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207453.2 |
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