Pregenerated sensors for LTF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032496Ensembl transcript IDs: ENSMUST00000035077.8, ENSMUST00000196122.3, ENSMUST00000196777.5, ENSMUST00000197575.2, ENSMUST00000198152.2, ENSMUST00000198884.5, ENSMUST00000199313.2, ENSMUST00000199815.5
Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGCAGGGAGTGAGGAGACCAGATGGTCTGAAGGCCCCCGGACCGTaGCTCCGGGATGAGACTTCCTGGGAAGGTTCTGCTATTTGCTCA | + |
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Preference number: 1 (lower is better) Translates to: QQGVRRPDGLKAPGP*LRDETSWEGSAICS Trigger: TGAGCAAATAGCAGAACCTTCCCAGGAAGTCTCATCCCGGAGCCACGGTCCGGGGGCCTTCAGACCATCTGGTCTCCTCACTCCCTGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| 3UTR TCA 90 bp | GGGAATGAGATGCAGGTGACCCTGCCTCTGCTTGCTCTGTTCCACTaGTCACACTTGCGCTTCTCCTCACTGCCCACGGCACACCATGTG | + |
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Preference number: 1 (lower is better) Translates to: GNEMQVTLPLLALFH*SHLRFSSLPTAHHV Trigger: CACATGGTGTGCCGTGGGCAGTGAGGAGAAGCGCAAGTGTGATCAGTGGAACAGAGCAAGCAGAGGCAGGGTCACCTGCATCTCATTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198152.2 |
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| 3UTR CCA 90 bp | CTGGGGACAGAAACATCACGTGGTTGTCCCCAGACTCCAGGTCAATaGGCACCATGCCTGAAACTTCAGGATAAAGGAAGGGCTGGACCG | + |
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Preference number: 1 (lower is better) Translates to: LGTETSRGCPQTPGQ*APCLKLQDKGRAGP Trigger: CGGTCCAGCCCTTCCTTTATCCTGAAGTTTCAGGCATGGTGCCCATTGACCTGGAGTCTGGGGACAACCACGTGATGTTTCTGTCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| 3UTR TCA 90 bp | GCGCTTCTCCTCACTGCCCACGGCACACCATGTGACCCGGGCCTTTaGGGCTATCACATCCTGCTGCTTTTTATTCAGGTTCTGTATGGA | + |
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Preference number: 1 (lower is better) Translates to: ALLLTAHGTPCDPGL*GYHILLLFIQVLYG Trigger: TCCATACAGAACCTGAATAAAAAGCAGCAGGATGTGATAGCCTCAAAGGCCCGGGTCACATGGTGTGCCGTGGGCAGTGAGGAGAAGCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198152.2 |
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| 3UTR CCA 90 bp | TCTTTGTCATTCGTGCTTCGGGATACGACAGCATGTGAAGGGACTTaGGCCAGGTGGCACTCCTTGTATTCTGTCACCGGCTTCCAGGTG | + |
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Preference number: 1 (lower is better) Translates to: SLSFVLRDTTACEGT*ARWHSLYSVTGFQV Trigger: CACCTGGAAGCCGGTGACAGAATACAAGGAGTGCCACCTGGCCCAAGTCCCTTCACATGCTGTCGTATCCCGAAGCACGAATGACAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198152.2 |
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| 3UTR TCA 90 bp | ATCTCCCTTCATGATTGCGACAATGCAGTCTTCCGTGGTGGGGAATaGGATGCAGGTGACCCTGCCTCTGCTTGCTCTGTTCCACTGATC | + |
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Preference number: 1 (lower is better) Translates to: ISLHDCDNAVFRGGE*DAGDPASACSVPLI Trigger: GATCAGTGGAACAGAGCAAGCAGAGGCAGGGTCACCTGCATCTCATTCCCCACCACGGAAGACTGCATTGTCGCAATCATGAAGGGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198152.2 |
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| 3UTR GCA 90 bp | GAAACATCACGTGGTTGTCCCCAGACTCCAGGTCAATGGGCACCATaGCTGAAACTTCAGGATAAAGGAAGGGCTGGACCGAGAATCTCC | + |
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Preference number: 1 (lower is better) Translates to: ETSRGCPQTPGQWAP*LKLQDKGRAGPRIS Trigger: GGAGATTCTCGGTCCAGCCCTTCCTTTATCCTGAAGTTTCAGGCATGGTGCCCATTGACCTGGAGTCTGGGGACAACCACGTGATGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| 3UTR TCA 90 bp | CATCACGTGGTTGTCCCCAGACTCCAGGTCAATGGGCACCATGCCTaGAACTTCAGGATAAAGGAAGGGCTGGACCGAGAATCTCCAAAA | + |
|
Preference number: 1 (lower is better) Translates to: HHVVVPRLQVNGHHA*NFRIKEGLDRESPK Trigger: TTTTGGAGATTCTCGGTCCAGCCCTTCCTTTATCCTGAAGTTTCAGGCATGGTGCCCATTGACCTGGAGTCTGGGGACAACCACGTGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| 3UTR CCA 90 bp | CAAGGAGTGCACACAGTCATGTGCAAACTTATGTTGAGGCATACATaGTCACCCATACGCACGCATGATCTGGGGCACACAGATGCACAT | + |
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Preference number: 1 (lower is better) Translates to: QGVHTVMCKLMLRHT*SPIRTHDLGHTDAH Trigger: ATGTGCATCTGTGTGCCCCAGATCATGCGTGCGTATGGGTGACCATGTATGCCTCAACATAAGTTTGCACATGACTGTGTGCACTCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| 3UTR TCA 90 bp | TATGACGAGAAACTCAACACTACTTCATTTTATTTCTACCTAAAGTaGCAGCAGGGAGTGAGGAGACCAGATGGTCTGAAGGCCCCCGGA | + |
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Preference number: 1 (lower is better) Translates to: YDEKLNTTSFYFYLK*QQGVRRPDGLKAPG Trigger: TCCGGGGGCCTTCAGACCATCTGGTCTCCTCACTCCCTGCTGTCACTTTAGGTAGAAATAAAATGAAGTAGTGTTGAGTTTCTCGTCATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000197575.2 |
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| 3UTR TCA 90 bp | AAGTGTGCAGGCAAGTGGTCAGACACAGGATTCCAGTATAAACTTTaGGGAGCAATGAGTGACACCTCATATGACGAGAAACTCAACACT | + |
|
Preference number: 1 (lower is better) Translates to: KCAGKWSDTGFQYKL*GAMSDTSYDEKLNT Trigger: AGTGTTGAGTTTCTCGTCATATGAGGTGTCACTCATTGCTCCTCAAAGTTTATACTGGAATCCTGTGTCTGACCACTTGCCTGCACACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| 3UTR TCA 90 bp | GCAAGTGGTCAGACACAGGATTCCAGTATAAACTTTGAGGAGCAATaGGTGACACCTCATATGACGAGAAACTCAACACTACTTCATTTT | + |
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Preference number: 1 (lower is better) Translates to: ASGQTQDSSINFEEQ*VTPHMTRNSTLLHF Trigger: AAAATGAAGTAGTGTTGAGTTTCTCGTCATATGAGGTGTCACTCATTGCTCCTCAAAGTTTATACTGGAATCCTGTGTCTGACCACTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| 3UTR CAA 90 bp | CGGGATACGACAGCATGTGAAGGGACTTGGGCCAGGTGGCACTCCTaGTATTCTGTCACCGGCTTCCAGGTGTTGTCTGGGCAGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: RDTTACEGTWARWHS*YSVTGFQVLSGQSS Trigger: GCTGCTCTGCCCAGACAACACCTGGAAGCCGGTGACAGAATACAAGGAGTGCCACCTGGCCCAAGTCCCTTCACATGCTGTCGTATCCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198152.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGCGACAATGCAGTCTTCCGTGGTGGGGAATGAGATGCAGGTGACCCTGCCTCTTCCAGGTGTTGTCTaGGCAGAGCAGCTTGTACTG | + |
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Preference number: 2 (lower is better) Translates to: IATMQSSVVGNEMQVTLPLPGVV*AEQLVL Trigger: CAGTACAAGCTGCTCTGCCCAGACAACACCTGGAAG...AGGCAGGGTCACCTGCATCTCATTCCCCACCACGGAAGACTGCATTGTCGCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198152.2 |
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| 3UTR-3UTR CCA 90 bp | CGGAGAAGCTCCCAGATGGCCTCTTCTTTGTCATTCGTGCTTCGGGATACGACAGGGACTTGGGCCAGGTaGCACTCCTTGTATTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: RRSSQMASSLSFVLRDTTGTWAR*HSLYSV Trigger: GACAGAATACAAGGAGTGCCACCTGGCCCAAGTCCC...TGTCGTATCCCGAAGCACGAATGACAAAGAAGAGGCCATCTGGGAGCTTCTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198152.2 |
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| 3UTR-3UTR CCA 90 bp | CAGATGCACATGTACTGTGATCTCTATGTGAAGAAACCAGATCCCCTGGGGACAAGTGAGGAGACCAGATaGTCTGAAGGCCCCCGGACC | + |
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Preference number: 2 (lower is better) Translates to: QMHMYCDLYVKKPDPLGTSEETR*SEGPRT Trigger: GGTCCGGGGGCCTTCAGACCATCTGGTCTCCTCACT...TGTCCCCAGGGGATCTGGTTTCTTCACATAGAGATCACAGTACATGTGCATCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| 3UTR CAA 90 bp | AAACTCTCCTGGACACCTCTGTCCATTTCTCCCAAACTGAACCTGTaGGTCAAGCAGCACCTGCTGAAGGACTTCCACCTTGTCTGTCCG | + |
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Preference number: 2 (lower is better) Translates to: KLSWTPLSISPKLNL*VKQHLLKDFHLVCP Trigger: CGGACAGACAAGGTGGAAGTCCTTCAGCAGGTGCTGCTTGACCAACAGGTTCAGTTTGGGAGAAATGGACAGAGGTGTCCAGGAGAGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199815.5 |
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| 3UTR-3UTR CCA 90 bp | CACCCATACGCACGCATGATCTGGGGCACACAGATGCACATGTACTGTGATCTCCGGGATGAGACTTCCTaGGAAGGTTCTGCTATTTGC | + |
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Preference number: 2 (lower is better) Translates to: HPYARMIWGTQMHMYCDLRDETS*EGSAIC Trigger: GCAAATAGCAGAACCTTCCCAGGAAGTCTCATCCCG...GAGATCACAGTACATGTGCATCTGTGTGCCCCAGATCATGCGTGCGTATGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGACTCCAGGTCAATGGGCACCATGCCTGAAACTTCAGGATAAAGGAAGGAAGTGTGCAGGCAAGTaGTCAGACACAGGATTCCAG | + |
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Preference number: 2 (lower is better) Translates to: PQTPGQWAPCLKLQDKGRKCAGK*SDTGFQ Trigger: CTGGAATCCTGTGTCTGACCACTTGCCTGCACACTT...CCTTCCTTTATCCTGAAGTTTCAGGCATGGTGCCCATTGACCTGGAGTCTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCTGGACACCTCTGTCCATTTCTCCCAAACTGAACCTGTTGGTCAAGCAGCACGAGACACTACAGCATaGTTTGGGGCTATGGCTAGG | + |
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Preference number: 2 (lower is better) Translates to: LLDTSVHFSQTEPVGQAARDTTA*FGAMAR Trigger: CCTAGCCATAGCCCCAAACCATGCTGTAGTGTCTCG...TGCTGCTTGACCAACAGGTTCAGTTTGGGAGAAATGGACAGAGGTGTCCAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199815.5 |
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| 3UTR CAA 90 bp | GTCGCTATGACGTACTCCTTTCCCAGATACTTCTCCGATGTGGTTTaGCCGGGGATCTTGGCCAGACACTCAGTGTTGTCATTGAACAGA | + |
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Preference number: 2 (lower is better) Translates to: VAMTYSFPRYFSDVV*PGILARHSVLSLNR Trigger: TCTGTTCAATGACAACACTGAGTGTCTGGCCAAGATCCCCGGCAAAACCACATCGGAGAAGTATCTGGGAAAGGAGTACGTCATAGCGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198884.5 |
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| 3UTR-3UTR GCA 90 bp | GACCCTGCCTCTGCTTGCTCTGTTCCACTGATCACACTTGCGCTTCTCCTCACTGAGGCTATCACATCCTaGTGCTTTTTATTCAGGTTC | + |
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Preference number: 2 (lower is better) Translates to: DPASACSVPLITLALLLTEAITS*CFLFRF Trigger: GAACCTGAATAAAAAGCAGCAGGATGTGATAGCCTC...AGTGAGGAGAAGCGCAAGTGTGATCAGTGGAACAGAGCAAGCAGAGGCAGGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198152.2 |
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| 3UTR-3UTR TCA 90 bp | TGGACCGAGAATCTCCAAAAGCAAGTCCAAGTGTGCAGGCAAGTGGTCAGACACTATTTCTACCTAAAGTaGCAGCAGGGAGTGAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: WTENLQKQVQVCRQVVRHYFYLK*QQGVRR Trigger: TCTCCTCACTCCCTGCTGTCACTTTAGGTAGAAATA...GTGTCTGACCACTTGCCTGCACACTTGGACTTGCTTTTGGAGATTCTCGGTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGTGGATGGTGACATTCCAGATTGTCCTCTGGCTTTCACACGTGTGTGCACACATCAGTGCAAGGAGTaGACACAGTCATGTGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: KVDGDIPDCPLAFTRVCTHQCKE*TQSCAN Trigger: GTTTGCACATGACTGTGTGCACTCCTTGCACTGATG...TGTGCACACACGTGTGAAAGCCAGAGGACAATCTGGAATGTCACCATCCACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTGTGCACACACACACATAAGCATTAGTGCAAGTACACAGTCCTATGCAAACATGTTGAGGCATACATaGTCACCCATACGCACGCAT | + |
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Preference number: 2 (lower is better) Translates to: VCAHTHISISASTQSYANMLRHT*SPIRTH Trigger: ATGCGTGCGTATGGGTGACCATGTATGCCTCAACAT...GTTTGCATAGGACTGTGTACTTGCACTAATGCTTATGTGTGTGTGTGCACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| 3UTR CCA 72 bp | GTGAGGAGACCAGATGGTCTGAAGGCCCCCGGACCGTaGCTCCGGGATGAGACTTCCTGGGAAGGTTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: VRRPDGLKAPGP*LRDETSWEGSA Trigger: AGCAGAACCTTCCCAGGAAGTCTCATCCCGGAGCCACGGTCCGGGGGCCTTCAGACCATCTGGTCTCCTCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| 3UTR TCA 72 bp | ATGCAGGTGACCCTGCCTCTGCTTGCTCTGTTCCACTaGTCACACTTGCGCTTCTCCTCACTGCCCACGGCA | + |
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Preference number: 3 (lower is better) Translates to: MQVTLPLLALFH*SHLRFSSLPTA Trigger: TGCCGTGGGCAGTGAGGAGAAGCGCAAGTGTGATCAGTGGAACAGAGCAAGCAGAGGCAGGGTCACCTGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198152.2 |
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| 3UTR CCA 72 bp | CGGGATACGACAGCATGTGAAGGGACTTGGGCCAGGTaGCACTCCTTGTATTCTGTCACCGGCTTCCAGGTG | + |
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Preference number: 3 (lower is better) Translates to: RDTTACEGTWAR*HSLYSVTGFQV Trigger: CACCTGGAAGCCGGTGACAGAATACAAGGAGTGCCACCTGGCCCAAGTCCCTTCACATGCTGTCGTATCCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198152.2 |
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| 3UTR GCA 72 bp | CGTGGTTGTCCCCAGACTCCAGGTCAATGGGCACCATaGCTGAAACTTCAGGATAAAGGAAGGGCTGGACCG | + |
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Preference number: 3 (lower is better) Translates to: RGCPQTPGQWAP*LKLQDKGRAGP Trigger: CGGTCCAGCCCTTCCTTTATCCTGAAGTTTCAGGCATGGTGCCCATTGACCTGGAGTCTGGGGACAACCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| 3UTR CCA 72 bp | TTCGTGCTTCGGGATACGACAGCATGTGAAGGGACTTaGGCCAGGTGGCACTCCTTGTATTCTGTCACCGGC | + |
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Preference number: 3 (lower is better) Translates to: FVLRDTTACEGT*ARWHSLYSVTG Trigger: GCCGGTGACAGAATACAAGGAGTGCCACCTGGCCCAAGTCCCTTCACATGCTGTCGTATCCCGAAGCACGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198152.2 |
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| 3UTR TCA 72 bp | CAATGCAGTCTTCCGTGGTGGGGAATGAGATGCAGGTaGCCCTGCCTCTGCTTGCTCTGTTCCACTGATCAC | + |
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Preference number: 3 (lower is better) Translates to: QCSLPWWGMRCR*PCLCLLCSTDH Trigger: GTGATCAGTGGAACAGAGCAAGCAGAGGCAGGGTCACCTGCATCTCATTCCCCACCACGGAAGACTGCATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198152.2 |
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| 3UTR TCA 72 bp | CTCACTGCCCACGGCACACCATGTGACCCGGGCCTTTaGGGCTATCACATCCTGCTGCTTTTTATTCAGGTT | + |
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Preference number: 3 (lower is better) Translates to: LTAHGTPCDPGL*GYHILLLFIQV Trigger: AACCTGAATAAAAAGCAGCAGGATGTGATAGCCTCAAAGGCCCGGGTCACATGGTGTGCCGTGGGCAGTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198152.2 |
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| 3UTR TCA 72 bp | CATGATTGCGACAATGCAGTCTTCCGTGGTGGGGAATaGGATGCAGGTGACCCTGCCTCTGCTTGCTCTGTT | + |
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Preference number: 3 (lower is better) Translates to: HDCDNAVFRGGE*DAGDPASACSV Trigger: AACAGAGCAAGCAGAGGCAGGGTCACCTGCATCTCATTCCCCACCACGGAAGACTGCATTGTCGCAATCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198152.2 |
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| 3UTR GCA 72 bp | GGAGAAGCTCCCAGATGGCCTCTTCTTTGTCATTCGTaGTTCGGGATACGACAGCATGTGAAGGGACTTGGG | + |
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Preference number: 3 (lower is better) Translates to: GEAPRWPLLCHS*FGIRQHVKGLG Trigger: CCCAAGTCCCTTCACATGCTGTCGTATCCCGAAGCACGAATGACAAAGAAGAGGCCATCTGGGAGCTTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198152.2 |
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| 3UTR CCA 72 bp | AGGACTTCCACCTTGTCTGTCCGAGACACTACAGCATaGTTTGGGGCTATGGCTAGGTGGCAGTTCTTAGCC | + |
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Preference number: 3 (lower is better) Translates to: RTSTLSVRDTTA*FGAMARWQFLA Trigger: GGCTAAGAACTGCCACCTAGCCATAGCCCCAAACCATGCTGTAGTGTCTCGGACAGACAAGGTGGAAGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199815.5 |
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| 3UTR CCA 72 bp | CAAACTTCTCCTGTGACTGGCGGAGAAGCTCCCAGATaGCCTCTTCTTTGTCATTCGTGCTTCGGGATACGA | + |
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Preference number: 3 (lower is better) Translates to: QTSPVTGGEAPR*PLLCHSCFGIR Trigger: TCGTATCCCGAAGCACGAATGACAAAGAAGAGGCCATCTGGGAGCTTCTCCGCCAGTCACAGGAGAAGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198152.2 |
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| 3UTR CCA 72 bp | GAAACATCACGTGGTTGTCCCCAGACTCCAGGTCAATaGGCACCATGCCTGAAACTTCAGGATAAAGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: ETSRGCPQTPGQ*APCLKLQDKGR Trigger: CCTTCCTTTATCCTGAAGTTTCAGGCATGGTGCCCATTGACCTGGAGTCTGGGGACAACCACGTGATGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| 3UTR-3UTR CAA 90 bp | ATCCTGCTGCTTTTTATTCAGGTTCTGTATGGATGTGGTGTAGCTGAAGGTCAGTCTGGGCAGAGCAGCTaGTACTGGTCCCTTTCGGCT | + |
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Preference number: 3 (lower is better) Translates to: ILLLFIQVLYGCGVAEGQSGQSS*YWSLSA Trigger: AGCCGAAAGGGACCAGTACAAGCTGCTCTGCCCAGA...CTGACCTTCAGCTACACCACATCCATACAGAACCTGAATAAAAAGCAGCAGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198152.2 |
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| 3UTR TCA 72 bp | TATGTTGAGGCATACATGGTCACCCATACGCACGCATaGTCTGGGGCACACAGATGCACATGTACTGTGATC | + |
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Preference number: 3 (lower is better) Translates to: YVEAYMVTHTHA*SGAHRCTCTVI Trigger: GATCACAGTACATGTGCATCTGTGTGCCCCAGATCATGCGTGCGTATGGGTGACCATGTATGCCTCAACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| 3UTR GCA 72 bp | CACCATGTGACCCGGGCCTTTGAGGCTATCACATCCTaGTGCTTTTTATTCAGGTTCTGTATGGATGTGGTG | + |
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Preference number: 3 (lower is better) Translates to: HHVTRAFEAITS*CFLFRFCMDVV Trigger: CACCACATCCATACAGAACCTGAATAAAAAGCAGCAGGATGTGATAGCCTCAAAGGCCCGGGTCACATGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198152.2 |
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| 3UTR CCA 72 bp | CACACAGTCATGTGCAAACTTATGTTGAGGCATACATaGTCACCCATACGCACGCATGATCTGGGGCACACA | + |
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Preference number: 3 (lower is better) Translates to: HTVMCKLMLRHT*SPIRTHDLGHT Trigger: TGTGTGCCCCAGATCATGCGTGCGTATGGGTGACCATGTATGCCTCAACATAAGTTTGCACATGACTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| 3UTR TCA 72 bp | TGCAAGGAGTGCACACAGTCATGTGCAAACTTATGTTaGGGCATACATGGTCACCCATACGCACGCATGATC | + |
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Preference number: 3 (lower is better) Translates to: CKECTQSCANLC*GIHGHPYARMI Trigger: GATCATGCGTGCGTATGGGTGACCATGTATGCCTCAACATAAGTTTGCACATGACTGTGTGCACTCCTTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| 3UTR TCA 72 bp | GGCAAGTGGTCAGACACAGGATTCCAGTATAAACTTTaGGGAGCAATGAGTGACACCTCATATGACGAGAAA | + |
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Preference number: 3 (lower is better) Translates to: GKWSDTGFQYKL*GAMSDTSYDEK Trigger: TTTCTCGTCATATGAGGTGTCACTCATTGCTCCTCAAAGTTTATACTGGAATCCTGTGTCTGACCACTTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| 3UTR GCA 72 bp | ATGCAAACATCAGTGCAAGGAGTGCACACAGTCATGTaGAAACTTATGTTGAGGCATACATGGTCACCCATA | + |
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Preference number: 3 (lower is better) Translates to: MQTSVQGVHTVM*KLMLRHTWSPI Trigger: TATGGGTGACCATGTATGCCTCAACATAAGTTTGCACATGACTGTGTGCACTCCTTGCACTGATGTTTGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| CDS-3UTR GCA 90 bp | GCAGGGAGTGAGGAGACCAGATGGTCTGAAGGCCCCCGGACCGTGGCTCCGGGATCACAATGGCCTGGATaGACTGGCGGGTGGAGGATT | + |
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Preference number: 4 (lower is better) Translates to: AGSEETRWSEGPRTVAPGSQWPG*TGGWRI Trigger: AATCCTCCACCCGCCAGTGCATCCAGGCCATTGTGA...TCCCGGAGCCACGGTCCGGGGGCCTTCAGACCATCTGGTCTCCTCACTCCCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| CDS-3UTR CCA 90 bp | CCTAAAGTGACAGCAGGGAGTGAGGAGACCAGATGGTCTGAAGGCCCCCGGACCGCAGGCTTCCAGGAGTaGGGAGCTGGAGCACTGCTT | + |
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Preference number: 4 (lower is better) Translates to: PKVTAGSEETRWSEGPRTAGFQE*GAGALL Trigger: AAGCAGTGCTCCAGCTCCCCACTCCTGGAAGCCTGC...GGTCCGGGGGCCTTCAGACCATCTGGTCTCCTCACTCCCTGCTGTCACTTTAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| CDS-3UTR CCA 90 bp | CCTAAAGTGACAGCAGGGAGTGAGGAGACCAGATGGTCTGAAGGCCCCCGGACCGGGACTTGGGCCAGGTaGCACTCCTTGTATTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: PKVTAGSEETRWSEGPRTGTWAR*HSLYSV Trigger: GACAGAATACAAGGAGTGCCACCTGGCCCAAGTCCC...GGTCCGGGGGCCTTCAGACCATCTGGTCTCCTCACTCCCTGCTGTCACTTTAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| CDS-3UTR GCA 90 bp | CCCCAGACTCCAGGTCAATGGGCACCATGCCTGAAACTTCAGGATAAAGGAAGGGGGGATGTTCCAGCCTaGGGTCCTGTCCACGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PQTPGQWAPCLKLQDKGRGDVPA*GPVHGS Trigger: ACTGCCGTGGACAGGACCGCAGGCTGGAACATCCCC...CCTTCCTTTATCCTGAAGTTTCAGGCATGGTGCCCATTGACCTGGAGTCTGGGG 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CCA 90 bp | CCTAAAGTGACAGCAGGGAGTGAGGAGACCAGATGGTCTGAAGGCCCCCGGACCGGGAATCTATCCTTTTaGGCACCGGGAACACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PKVTAGSEETRWSEGPRTGNLSF*APGTQL Trigger: GAGCTGTGTTCCCGGTGCCCAAAAGGATAGATTCCC...GGTCCGGGGGCCTTCAGACCATCTGGTCTCCTCACTCCCTGCTGTCACTTTAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTACCTAAAGTGACAGCAGGGAGTGAGGAGACCAGATGGTCTGAAGGCCCCCCAGGAGTGGGGAGCTaGAGCACTGCTTCAGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLPKVTAGSEETRWSEGPPGVGS*STASGA Trigger: AGCGCCTGAAGCAGTGCTCCAGCTCCCCACTCCTGG...GGGGCCTTCAGACCATCTGGTCTCCTCACTCCCTGCTGTCACTTTAGGTAGAAA 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR TCA 90 bp | CACCCATACGCACGCATGATCTGGGGCACACAGATGCACATGTACTGTGATCTCTTCCGTGGTGGGGAATaGGATGCAGGTGACCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HPYARMIWGTQMHMYCDLFRGGE*DAGDPA Trigger: GGCAGGGTCACCTGCATCTCATTCCCCACCACGGAA...GAGATCACAGTACATGTGCATCTGTGTGCCCCAGATCATGCGTGCGTATGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CCA 90 bp | CTACCTAAAGTGACAGCAGGGAGTGAGGAGACCAGATGGTCTGAAGGCCCCCGGCTTCCAGGTGTTGTCTaGGCAGAGCAGCTTGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: LPKVTAGSEETRWSEGPRLPGVV*AEQLVL Trigger: CAGTACAAGCTGCTCTGCCCAGACAACACCTGGAAG...CCGGGGGCCTTCAGACCATCTGGTCTCCTCACTCCCTGCTGTCACTTTAGGTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| 3UTR CAA 72 bp | ACAGCATGTGAAGGGACTTGGGCCAGGTGGCACTCCTaGTATTCTGTCACCGGCTTCCAGGTGTTGTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TACEGTWARWHS*YSVTGFQVLSG Trigger: CCCAGACAACACCTGGAAGCCGGTGACAGAATACAAGGAGTGCCACCTGGCCCAAGTCCCTTCACATGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198152.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGGAGTGAGGAGACCAGATGGTCTGAAGGCCCCCGGACCGTGGCTCCGGGATATTCTGCAAGACAGTaGAGTCCTTCAAAAATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: AGSEETRWSEGPRTVAPGYSARQ*SPSKMQ Trigger: TTGCATTTTTGAAGGACTCCACTGTCTTGCAGAATA...TCCCGGAGCCACGGTCCGGGGGCCTTCAGACCATCTGGTCTCCTCACTCCCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CCA 90 bp | CCTAAAGTGACAGCAGGGAGTGAGGAGACCAGATGGTCTGAAGGCCCCCGGACCGCTCAGTGTTTTCACTaGGTAAGAAAAGCGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PKVTAGSEETRWSEGPRTAQCFH*VRKAQA Trigger: AGCCTGCGCTTTTCTTACCCAGTGAAAACACTGAGC...GGTCCGGGGGCCTTCAGACCATCTGGTCTCCTCACTCCCTGCTGTCACTTTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000197575.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCCCAGATACTTCTCCGATGTGGTTTTGCCGGGGATCTTGGCCAGACACTCTCACAATGGCCTGGATaGACTGGCGGGTGGAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LSQILLRCGFAGDLGQTLSQWPG*TGGWRI Trigger: AATCCTCCACCCGCCAGTGCATCCAGGCCATTGTGA...GAGTGTCTGGCCAAGATCCCCGGCAAAACCACATCGGAGAAGTATCTGGGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198884.5 |
||
| CDS-3UTR TCA 90 bp | TACGCACGCATGATCTGGGGCACACAGATGCACATGTACTGTGATCTCTATGTGGGAATGAGATGCAGGTaGCCCTGCCTCTGCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YARMIWGTQMHMYCDLYVGMRCR*PCLCLL Trigger: GAGCAAGCAGAGGCAGGGTCACCTGCATCTCATTCC...CACATAGAGATCACAGTACATGTGCATCTGTGTGCCCCAGATCATGCGTGCGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR TCA 90 bp | CGTGGTTGTCCCCAGACTCCAGGTCAATGGGCACCATGCCTGAAACTTCAGGATTCAAAGAGCTCCAGGTaGAGCCAGCATCTTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RGCPQTPGQWAPCLKLQDSKSSR*SQHLLF Trigger: GAAGAGAAGATGCTGGCTTCACCTGGAGCTCTTTGA...ATCCTGAAGTTTCAGGCATGGTGCCCATTGACCTGGAGTCTGGGGACAACCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR TCA 90 bp | CACCCATACGCACGCATGATCTGGGGCACACAGATGCACATGTACTGTGATCTCTCAAGCAGCACCTGCTaGAGGACTTCCACCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HPYARMIWGTQMHMYCDLSSSTC*RTSTLS Trigger: AGACAAGGTGGAAGTCCTTCAGCAGGTGCTGCTTGA...GAGATCACAGTACATGTGCATCTGTGTGCCCCAGATCATGCGTGCGTATGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTACCTAAAGTGACAGCAGGGAGTGAGGAGACCAGATGGTCTGAAGGCCCCTCAAGCAGCACCTGCTaGAGGACTTCCACCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLPKVTAGSEETRWSEGPSSSTC*RTSTLS Trigger: AGACAAGGTGGAAGTCCTTCAGCAGGTGCTGCTTGA...GGGGCCTTCAGACCATCTGGTCTCCTCACTCCCTGCTGTCACTTTAGGTAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000197575.2 |
||
| CDS-3UTR GCA 90 bp | CCTTTCCCAGATACTTCTCCGATGTGGTTTTGCCGGGGATCTTGGCCAGACACTCCCGTAGACTTCAGCTaGCACAGGTCGCAGTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PFPDTSPMWFCRGSWPDTPVDFS*HRSQFV Trigger: TACAAACTGCGACCTGTGGCAGCTGAAGTCTACGGG...AGTGTCTGGCCAAGATCCCCGGCAAAACCACATCGGAGAAGTATCTGGGAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198884.5 |
||
| CDS-3UTR GCA 90 bp | CCTAAAGTGACAGCAGGGAGTGAGGAGACCAGATGGTCTGAAGGCCCCCGGACCGGAGTCCTTCAAAAATaGAACATTTCCTGCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PKVTAGSEETRWSEGPRTGVLQK*NISCLL Trigger: GAGAAGGCAGGAAATGTTGCATTTTTGAAGGACTCC...GGTCCGGGGGCCTTCAGACCATCTGGTCTCCTCACTCCCTGCTGTCACTTTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CCA 90 bp | TGGACCGAGAATCTCCAAAAGCAAGTCCAAGTGTGCAGGCAAGTGGTCAGACACCTCTGTTTGTCACAATaGCCTGGATGCACTGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: WTENLQKQVQVCRQVVRHLCLSQ*PGCTGG Trigger: CCCGCCAGTGCATCCAGGCCATTGTGACAAACAGAG...GTGTCTGACCACTTGCCTGCACACTTGGACTTGCTTTTGGAGATTCTCGGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CCA 90 bp | CAGATACTTCTCCGATGTGGTTTTGCCGGGGATCTTGGCCAGACACTCAGTGTTCTCTGTTTGTCACAATaGCCTGGATGCACTGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: QILLRCGFAGDLGQTLSVLCLSQ*PGCTGG Trigger: CCCGCCAGTGCATCCAGGCCATTGTGACAAACAGAG...AACACTGAGTGTCTGGCCAAGATCCCCGGCAAAACCACATCGGAGAAGTATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198884.5 |
||
| CDS-3UTR CCA 90 bp | TTTCTACCTAAAGTGACAGCAGGGAGTGAGGAGACCAGATGGTCTGAAGGCCCCCGAGACACTACAGCATaGTTTGGGGCTATGGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLPKVTAGSEETRWSEGPRDTTA*FGAMAR Trigger: CCTAGCCATAGCCCCAAACCATGCTGTAGTGTCTCG...GGGGCCTTCAGACCATCTGGTCTCCTCACTCCCTGCTGTCACTTTAGGTAGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000197575.2 |
||
| 3UTR CAA 72 bp | TGTGACTGGCGGAGAAGCTCCCAGATGGCCTCTTCTTaGTCATTCGTGCTTCGGGATACGACAGCATGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CDWRRSSQMASS*SFVLRDTTACE Trigger: TTCACATGCTGTCGTATCCCGAAGCACGAATGACAAAGAAGAGGCCATCTGGGAGCTTCTCCGCCAGTCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198152.2 |
||
| CDS-3UTR TCA 90 bp | CACCCATACGCACGCATGATCTGGGGCACACAGATGCACATGTACTGTGATCTCCCATTTCTCCCAAACTaGACCTGTTGGTCAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HPYARMIWGTQMHMYCDLPFLPN*TCWSSS Trigger: GCTGCTTGACCAACAGGTTCAGTTTGGGAGAAATGG...GAGATCACAGTACATGTGCATCTGTGTGCCCCAGATCATGCGTGCGTATGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR GCA 90 bp | TGGACCGAGAATCTCCAAAAGCAAGTCCAAGTGTGCAGGCAAGTGGTCAGACACCCCGTAGACTTCAGCTaGCACAGGTCGCAGTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: WTENLQKQVQVCRQVVRHPVDFS*HRSQFV Trigger: TACAAACTGCGACCTGTGGCAGCTGAAGTCTACGGG...GTGTCTGACCACTTGCCTGCACACTTGGACTTGCTTTTGGAGATTCTCGGTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CCA 90 bp | GTGCAAGTACACAGTCCTATGCAAACATCAGTGCAAGGAGTGCACACAGTCATGGCATGTGAAGGGACTTaGGCCAGGTGGCACTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VQVHSPMQTSVQGVHTVMACEGT*ARWHSL Trigger: CAAGGAGTGCCACCTGGCCCAAGTCCCTTCACATGC...CATGACTGTGTGCACTCCTTGCACTGATGTTTGCATAGGACTGTGTACTTGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR TCA 90 bp | TCCCAGATACTTCTCCGATGTGGTTTTGCCGGGGATCTTGGCCAGACACTCAGTCCATTTCTCCCAAACTaGACTGCTGTTCTTCACGAC | + |
|
Preference number: 4 (lower is better) Translates to: SQILLRCGFAGDLGQTLSPFLPN*TAVLHD Trigger: GTCGTGAAGAACAGCAGTTCAGTTTGGGAGAAATGG...ACTGAGTGTCTGGCCAAGATCCCCGGCAAAACCACATCGGAGAAGTATCTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198884.5 |
||
| CDS-3UTR GCA 90 bp | AAGGTGGATGGTGACATTCCAGATTGTCCTCTGGCTTTCACACGTGTGTGCACACGCTTCCTCAAGGGATaGAGGTGGCCCATTCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: KVDGDIPDCPLAFTRVCTRFLKG*RWPIPI Trigger: AATTGGAATGGGCCACCTGCATCCCTTGAGGAAGCG...TGTGCACACACGTGTGAAAGCCAGAGGACAATCTGGAATGTCACCATCCACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| CDS-3UTR GCA 90 bp | CTTGTATTCTGTCACCGGCTTCCAGGTGTTGTCTGGGCAGAGCAGCTTGTACTGAACTTCCTCAAGGGATaGAGGTGGCCCATTCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: LVFCHRLPGVVWAEQLVLNFLKG*RWPIPI Trigger: AATTGGAATGGGCCACCTGCATCCCTTGAGGAAGTT...CAGTACAAGCTGCTCTGCCCAGACAACACCTGGAAGCCGGTGACAGAATACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198152.2 |
||
| CDS-3UTR CCA 90 bp | TACGCACGCATGATCTGGGGCACACAGATGCACATGTACTGTGATCTCTATGTGACAGGGCACAGAGATTaGATTTGGGGTCAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: YARMIWGTQMHMYCDLYVTGHRD*IWGQHQ Trigger: CTGGTGCTGACCCCAAATCCAATCTCTGTGCCCTGT...CACATAGAGATCACAGTACATGTGCATCTGTGTGCCCCAGATCATGCGTGCGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| CDS-3UTR CCA 90 bp | AAGGTGGATGGTGACATTCCAGATTGTCCTCTGGCTTTCACACGTGTGTGCACACGAGACACTACAGCATaGTTTGGGGCTATGGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KVDGDIPDCPLAFTRVCTRDTTA*FGAMAR Trigger: CCTAGCCATAGCCCCAAACCATGCTGTAGTGTCTCG...TGTGCACACACGTGTGAAAGCCAGAGGACAATCTGGAATGTCACCATCCACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| CDS-3UTR CCA 90 bp | CCTTTCCCAGATACTTCTCCGATGTGGTTTTGCCGGGGATCTTGGCCAGACACTCAGGCAAAACTCTCCTaGACACCTCTGTCCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PFPDTSPMWFCRGSWPDTQAKLS*TPLSIS Trigger: AGAAATGGACAGAGGTGTCCAGGAGAGTTTTGCCTG...AGTGTCTGGCCAAGATCCCCGGCAAAACCACATCGGAGAAGTATCTGGGAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198884.5 |
||
| 3UTR CAA 72 bp | TGGACACCTCTGTCCATTTCTCCCAAACTGAACCTGTaGGTCAAGCAGCACCTGCTGAAGGACTTCCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: WTPLSISPKLNL*VKQHLLKDFHL Trigger: AAGGTGGAAGTCCTTCAGCAGGTGCTGCTTGACCAACAGGTTCAGTTTGGGAGAAATGGACAGAGGTGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199815.5 |
||
| 3UTR CAA 72 bp | CCCAGATACTTCTCCGATGTGGTTTTGCCGGGGATCTaGGCCAGACACTCAGTGTTGTCATTGAACAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PRYFSDVVLPGI*ARHSVLSLNRR Trigger: CCTTCTGTTCAATGACAACACTGAGTGTCTGGCCAAGATCCCCGGCAAAACCACATCGGAGAAGTATCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000198884.5 ENSMUST00000199815.5 |
||
| CDS-3UTR TCA 90 bp | CGTGGTTGTCCCCAGACTCCAGGTCAATGGGCACCATGCCTGAAACTTCAGGATTTCTTCCTCAGAATTTaGCACAGCACACCATTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RGCPQTPGQWAPCLKLQDFFLRI*HSTPLN Trigger: GTTCAATGGTGTGCTGTGTCAAATTCTGAGGAAGAA...ATCCTGAAGTTTCAGGCATGGTGCCCATTGACCTGGAGTCTGGGGACAACCACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR TCA 90 bp | CCAAGTGTGCAGGCAAGTGGTCAGACACAGGATTCCAGTATAAACTTTGAGGAGCTTGCTCTGTTCCACTaGTCACACTTGCGCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSVQASGQTQDSSINFEELALFH*SHLRFS Trigger: GGAGAAGCGCAAGTGTGATCAGTGGAACAGAGCAAG...CTCCTCAAAGTTTATACTGGAATCCTGTGTCTGACCACTTGCCTGCACACTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR GCA 90 bp | CCCCAGACTCCAGGTCAATGGGCACCATGCCTGAAACTTCAGGATAAAGGAAGGATCTTCTCTTCTAACTaGTGCTACAGCAAGGTACCC | + |
|
Preference number: 4 (lower is better) Translates to: PQTPGQWAPCLKLQDKGRIFSSN*CYSKVP Trigger: GGGTACCTTGCTGTAGCAGCAGTTAGAAGAGAAGAT...CCTTCCTTTATCCTGAAGTTTCAGGCATGGTGCCCATTGACCTGGAGTCTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTACCTAAAGTGACAGCAGGGAGTGAGGAGACCAGATGGTCTGAAGGCCCCTGGAGTTGGTTCAGATaGAAGTTACTGCTGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLPKVTAGSEETRWSEGPWSWFR*KLLLFF Trigger: GAAGAACAGCAGTAACTTTCATCTGAACCAACTCCA...GGGGCCTTCAGACCATCTGGTCTCCTCACTCCCTGCTGTCACTTTAGGTAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR TCA 90 bp | TTCATTTTATTTCTACCTAAAGTGACAGCAGGGAGTGAGGAGACCAGATGGTCTGGATACGACAGCATGTaGAGGGACTTGGGCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FILFLPKVTAGSEETRWSGYDSM*RDLGQV Trigger: CACCTGGCCCAAGTCCCTTCACATGCTGTCGTATCC...AGACCATCTGGTCTCCTCACTCCCTGCTGTCACTTTAGGTAGAAATAAAATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR TCA 90 bp | ATTTTATTTCTACCTAAAGTGACAGCAGGGAGTGAGGAGACCAGATGGTCTGAATGTGACCCGGGCCTTTaGGGCTATCACATCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILFLPKVTAGSEETRWSECDPGL*GYHILL Trigger: CAGCAGGATGTGATAGCCTCAAAGGCCCGGGTCACA...TTCAGACCATCTGGTCTCCTCACTCCCTGCTGTCACTTTAGGTAGAAATAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTATGTGAAGAAACCAGATCCCCTGGGGACAGAAACATCACGTGGTTGTCCTTCCCGTCAGTATTCTaGAAGACAGTGGAGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLCEETRSPGDRNITWLSFPSVF*KTVESF Trigger: GAAGGACTCCACTGTCTTGCAGAATACTGACGGGAA...GGACAACCACGTGATGTTTCTGTCCCCAGGGGATCTGGTTTCTTCACATAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR GCA 90 bp | CAGATACTTCTCCGATGTGGTTTTGCCGGGGATCTTGGCCAGACACTCAGTGTTTCTCCCAAACTGAACTaGTGTTCTTCACGACTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: QILLRCGFAGDLGQTLSVSPKLN*CSSRLL Trigger: TAGCAGTCGTGAAGAACAGCAGTTCAGTTTGGGAGA...AACACTGAGTGTCTGGCCAAGATCCCCGGCAAAACCACATCGGAGAAGTATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198884.5 |
||
| CDS-3UTR CCA 90 bp | CAGATACTTCTCCGATGTGGTTTTGCCGGGGATCTTGGCCAGACACTCAGTGTTCACCATCAAGAGTCATaGCATCAGCTCTGTTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QILLRCGFAGDLGQTLSVHHQES*HQLCLS Trigger: TGACAAACAGAGCTGATGCCATGACTCTTGATGGTG...AACACTGAGTGTCTGGCCAAGATCCCCGGCAAAACCACATCGGAGAAGTATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198884.5 |
||
| CDS-3UTR CCA 90 bp | CAACACTACTTCATTTTATTTCTACCTAAAGTGACAGCAGGGAGTGAGGAGACCTCCGGGGCTGCTCTTTaGTCCCGTAGACTTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QHYFILFLPKVTAGSEETSGAAL*SRRLQL Trigger: CAGCTGAAGTCTACGGGACCAAAGAGCAGCCCCGGA...GGTCTCCTCACTCCCTGCTGTCACTTTAGGTAGAAATAAAATGAAGTAGTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CCA 90 bp | CAGATGCACATGTACTGTGATCTCTATGTGAAGAAACCAGATCCCCTGGGGACAGGGGAGGCAAAGAGCTaGAATCCCGATGCTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QMHMYCDLYVKKPDPLGTGEAKS*NPDACF Trigger: AAAACAAGCATCGGGATTCCAGCTCTTTGCCTCCCC...TGTCCCCAGGGGATCTGGTTTCTTCACATAGAGATCACAGTACATGTGCATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGCACACACACACATAAGCATTAGTGCAAGTACACAGTCCTATGCAAACCTCCATCCAGGCTCATaGCATCAGCATCTCCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VCAHTHISISASTQSYANLHPGS*HQHLPS Trigger: TGAAGGGAGATGCTGATGCCATGAGCCTGGATGGAG...GTTTGCATAGGACTGTGTACTTGCACTAATGCTTATGTGTGTGTGTGCACACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR TCA 90 bp | CCCCAGACTCCAGGTCAATGGGCACCATGCCTGAAACTTCAGGATAAAGGAAGGACTCAGTGTTGTCATTaGACAGAAGGTTTTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PQTPGQWAPCLKLQDKGRTQCCH*TEGFWF Trigger: AAACCAAAAACCTTCTGTTCAATGACAACACTGAGT...CCTTCCTTTATCCTGAAGTTTCAGGCATGGTGCCCATTGACCTGGAGTCTGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR GCA 90 bp | TGCCTGAAACTTCAGGATAAAGGAAGGGCTGGACCGAGAATCTCCAAAAGCAAGAAATGCAACATTTCCTaGCTTCTCAGCCAGACACCT | + |
|
Preference number: 4 (lower is better) Translates to: CLKLQDKGRAGPRISKSKKCNIS*LLSQTP Trigger: AGGTGTCTGGCTGAGAAGGCAGGAAATGTTGCATTT...CTTGCTTTTGGAGATTCTCGGTCCAGCCCTTCCTTTATCCTGAAGTTTCAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR TCA 90 bp | ACTCAACACTACTTCATTTTATTTCTACCTAAAGTGACAGCAGGGAGTGAGGAGTGGATGTGGTGTAGCTaGAGGTCAGGTAGAGCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: TQHYFILFLPKVTAGSEEWMWCS*RSGRAL Trigger: TAGGGCTCTACCTGACCTTCAGCTACACCACATCCA...CTCCTCACTCCCTGCTGTCACTTTAGGTAGAAATAAAATGAAGTAGTGTTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR TCA 90 bp | CAACACTACTTCATTTTATTTCTACCTAAAGTGACAGCAGGGAGTGAGGAGACCCCATTTCTCCCAAACTaGACCTGTTGGTCAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QHYFILFLPKVTAGSEETPFLPN*TCWSSS Trigger: GCTGCTTGACCAACAGGTTCAGTTTGGGAGAAATGG...GGTCTCCTCACTCCCTGCTGTCACTTTAGGTAGAAATAAAATGAAGTAGTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000197575.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTATGTGAAGAAACCAGATCCCCTGGGGACAGAAACATCACGTGGTTGTCCGCTATCACATCCTGCTaGTTTTTATTCAGGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLCEETRSPGDRNITWLSAITSC*FLFRFC Trigger: ACAGAACCTGAATAAAAAGCAGCAGGATGTGATAGC...GGACAACCACGTGATGTTTCTGTCCCCAGGGGATCTGGTTTCTTCACATAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR GCA 90 bp | CAGATGCACATGTACTGTGATCTCTATGTGAAGAAACCAGATCCCCTGGGGACAGAGGCTATCACATCCTaGTGCTTTTTATTCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QMHMYCDLYVKKPDPLGTEAITS*CFLFRF Trigger: GAACCTGAATAAAAAGCAGCAGGATGTGATAGCCTC...TGTCCCCAGGGGATCTGGTTTCTTCACATAGAGATCACAGTACATGTGCATCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR GCA 90 bp | GTGCAAGTACACAGTCCTATGCAAACATCAGTGCAAGGAGTGCACACAGTCATGCACAATCCAAGCCATTaGTTTTGGAGGATTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VQVHSPMQTSVQGVHTVMHNPSH*FWRISG Trigger: ACCAGAAATCCTCCAAAAGCAATGGCTTGGATTGTG...CATGACTGTGTGCACTCCTTGCACTGATGTTTGCATAGGACTGTGTACTTGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CCA 90 bp | TACTTCATTTTATTTCTACCTAAAGTGACAGCAGGGAGTGAGGAGACCAGATGGGGAGAAGCTCCCAGATaGCCTCTTCTTTGTCATTCG | + |
|
Preference number: 4 (lower is better) Translates to: YFILFLPKVTAGSEETRWGEAPR*PLLCHS Trigger: CGAATGACAAAGAAGAGGCCATCTGGGAGCTTCTCC...CCATCTGGTCTCCTCACTCCCTGCTGTCACTTTAGGTAGAAATAAAATGAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CCA 90 bp | TACTTCATTTTATTTCTACCTAAAGTGACAGCAGGGAGTGAGGAGACCAGATGGTTTTGCCGGGGATCTTaGCCAGACACTCAGTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YFILFLPKVTAGSEETRWFCRGS*PDTQCC Trigger: ACAACACTGAGTGTCTGGCCAAGATCCCCGGCAAAA...CCATCTGGTCTCCTCACTCCCTGCTGTCACTTTAGGTAGAAATAAAATGAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000197575.2 |
||
| CDS-3UTR GCA 90 bp | CCAAGTGTGCAGGCAAGTGGTCAGACACAGGATTCCAGTATAAACTTTGAGGAGTCAGATGAAAGTTACTaGTGTTCTTCACGACTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PSVQASGQTQDSSINFEESDESY*CSSRLL Trigger: TAGCAGTCGTGAAGAACAGCAGTAACTTTCATCTGA...CTCCTCAAAGTTTATACTGGAATCCTGTGTCTGACCACTTGCCTGCACACTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGCACACACACACATAAGCATTAGTGCAAGTACACAGTCCTATGCAAACTTCTCTTCTAACTGCTaGTACAGCAAGGTACCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VCAHTHISISASTQSYANFSSNC*YSKVPF Trigger: GAAGGGTACCTTGCTGTAGCAGCAGTTAGAAGAGAA...GTTTGCATAGGACTGTGTACTTGCACTAATGCTTATGTGTGTGTGTGCACACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGCACACACACACATAAGCATTAGTGCAAGTACACAGTCCTATGCAAACTCTTTGAGAAGAACTTaGATACCGCTTCCTCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VCAHTHISISASTQSYANSLRRT*IPLPQG Trigger: CCCTTGAGGAAGCGGTATCCAAGTTCTTCTCAAAGA...GTTTGCATAGGACTGTGTACTTGCACTAATGCTTATGTGTGTGTGTGCACACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CCA 90 bp | CAACACTACTTCATTTTATTTCTACCTAAAGTGACAGCAGGGAGTGAGGAGACCACGAGCTACACAGGTTaGGGAATCTATCCTTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QHYFILFLPKVTAGSEETTSYTG*GIYPFG Trigger: CCCAAAAGGATAGATTCCCCAACCTGTGTAGCTCGT...GGTCTCCTCACTCCCTGCTGTCACTTTAGGTAGAAATAAAATGAAGTAGTGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CCA 90 bp | TACTTCATTTTATTTCTACCTAAAGTGACAGCAGGGAGTGAGGAGACCAGATGGCAGGCAAAACTCTCCTaGACACCTCTGTCCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YFILFLPKVTAGSEETRWQAKLS*TPLSIS Trigger: AGAAATGGACAGAGGTGTCCAGGAGAGTTTTGCCTG...CCATCTGGTCTCCTCACTCCCTGCTGTCACTTTAGGTAGAAATAAAATGAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000197575.2 |
||
| CDS-3UTR CCA 90 bp | TACTTCATTTTATTTCTACCTAAAGTGACAGCAGGGAGTGAGGAGACCAGATGGCCAAGCCATTGCTTTTaGAGGATTTCTGGTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YFILFLPKVTAGSEETRWPSHCF*RISGSL Trigger: CAGAGAACCAGAAATCCTCCAAAAGCAATGGCTTGG...CCATCTGGTCTCCTCACTCCCTGCTGTCACTTTAGGTAGAAATAAAATGAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CCA 90 bp | ACTCAACACTACTTCATTTTATTTCTACCTAAAGTGACAGCAGGGAGTGAGGAGCAGGCAAAACTCTCCTaGACACCTCTGTCCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TQHYFILFLPKVTAGSEEQAKLS*TPLSIS Trigger: AGAAATGGACAGAGGTGTCCAGGAGAGTTTTGCCTG...CTCCTCACTCCCTGCTGTCACTTTAGGTAGAAATAAAATGAAGTAGTGTTGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000197575.2 |
||
| CDS-3UTR GCA 90 bp | CCAAGTGTGCAGGCAAGTGGTCAGACACAGGATTCCAGTATAAACTTTGAGGAGTTTCTCATCTCGTTCTaGCACCTTAAACATTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSVQASGQTQDSSINFEEFLISF*HLKHFS Trigger: AGAAAAATGTTTAAGGTGGCAGAACGAGATGAGAAA...CTCCTCAAAGTTTATACTGGAATCCTGTGTCTGACCACTTGCCTGCACACTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR GCA 90 bp | GACACCTCATATGACGAGAAACTCAACACTACTTCATTTTATTTCTACCTAAAGGACCCTGCCTCTGCTTaGTCTGTTCCACTGATCACA | + |
|
Preference number: 4 (lower is better) Translates to: DTSYDEKLNTTSFYFYLKDPASA*SVPLIT Trigger: TGTGATCAGTGGAACAGAGCAAGCAGAGGCAGGGTC...CTTTAGGTAGAAATAAAATGAAGTAGTGTTGAGTTTCTCGTCATATGAGGTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CCA 90 bp | ACTCAACACTACTTCATTTTATTTCTACCTAAAGTGACAGCAGGGAGTGAGGAGCACCATCAAGAGTCATaGCATCAGCTCTGTTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TQHYFILFLPKVTAGSEEHHQES*HQLCLS Trigger: TGACAAACAGAGCTGATGCCATGACTCTTGATGGTG...CTCCTCACTCCCTGCTGTCACTTTAGGTAGAAATAAAATGAAGTAGTGTTGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CCA 90 bp | CAACACTACTTCATTTTATTTCTACCTAAAGTGACAGCAGGGAGTGAGGAGACCATTCCAATTCAGGTATaGACGAAGTGTCCCTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: QHYFILFLPKVTAGSEETIPIQV*TKCPYR Trigger: CCTATAGGGACACTTCGTCCATACCTGAATTGGAAT...GGTCTCCTCACTCCCTGCTGTCACTTTAGGTAGAAATAAAATGAAGTAGTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGTGACACCTCATATGACGAGAAACTCAACACTACTTCATTTTATTTCTACTTTTGCCGGGGATCTTaGCCAGACACTCAGTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: MSDTSYDEKLNTTSFYFYFCRGS*PDTQCC Trigger: ACAACACTGAGTGTCTGGCCAAGATCCCCGGCAAAA...GTAGAAATAAAATGAAGTAGTGTTGAGTTTCTCGTCATATGAGGTGTCACTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR TCA 90 bp | TACTTCATTTTATTTCTACCTAAAGTGACAGCAGGGAGTGAGGAGACCAGATGGACTCAGTGTTGTCATTaGACAGAAGGTTTTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: YFILFLPKVTAGSEETRWTQCCH*TEGFWF Trigger: AAACCAAAAACCTTCTGTTCAATGACAACACTGAGT...CCATCTGGTCTCCTCACTCCCTGCTGTCACTTTAGGTAGAAATAAAATGAAGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000197575.2 |
||
| CDS-3UTR CCA 90 bp | GACACCTCATATGACGAGAAACTCAACACTACTTCATTTTATTTCTACCTAAAGCTTTTGGAGGATTTCTaGTTCTCTGCCAAGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DTSYDEKLNTTSFYFYLKLLEDF*FSAKTG Trigger: TCCAGTCTTGGCAGAGAACCAGAAATCCTCCAAAAG...CTTTAGGTAGAAATAAAATGAAGTAGTGTTGAGTTTCTCGTCATATGAGGTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGGAGTGAGGAGACCAGATGGTCTGAAGGCCCCCGGACCGTGGCTCCGGGAGCACAGAGATTGGATTaGGGGTCAGCACCAGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AGSEETRWSEGPRTVAPGAQRLD*GSAPGA Trigger: TGCCCCTGGTGCTGACCCCAAATCCAATCTCTGTGC...TCCCGGAGCCACGGTCCGGGGGCCTTCAGACCATCTGGTCTCCTCACTCCCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CAA 90 bp | GTGACAGCAGGGAGTGAGGAGACCAGATGGTCTGAAGGCCCCCGGACCGTGGCTTCTGGGCAGAGCAGCTaGTACTGGTCCCTTTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VTAGSEETRWSEGPRTVASGQSS*YWSLSA Trigger: AGCCGAAAGGGACCAGTACAAGCTGCTCTGCCCAGA...AGCCACGGTCCGGGGGCCTTCAGACCATCTGGTCTCCTCACTCCCTGCTGTCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CAA 90 bp | CCTAAAGTGACAGCAGGGAGTGAGGAGACCAGATGGTCTGAAGGCCCCCGGACCCACAGGGCACAGAGATaGGATTTGGGGTCAGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: PKVTAGSEETRWSEGPRTHRAQR*DLGSAP Trigger: TGGTGCTGACCCCAAATCCAATCTCTGTGCCCTGTG...GGTCCGGGGGCCTTCAGACCATCTGGTCTCCTCACTCCCTGCTGTCACTTTAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS CCA 90 bp | AGAGTCATGGCATCAGCTCTGTTTGTCACAATGGCCTGGATGCACTaGCGGGTGGAGGATTTCTTGACACAACTGAGCGGCGGGCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: RVMASALFVTMAWMH*RVEDFLTQLSGGPP Trigger: GGGTGGCCCGCCGCTCAGTTGTGTCAAGAAATCCTCCACCCGCCAGTGCATCCAGGCCATTGTGACAAACAGAGCTGATGCCATGACTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035077.8 ENSMUST00000196777.5 ENSMUST00000198884.5 |
||
| CDS CCA 90 bp | TCTTCACGACTGCTACCGCATAGTAGTGAGTCCGGGGCTGCTCTTTaGTCCCGTAGACTTCAGCTGCCACAGGTCGCAGTTTGTAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSRLLPHSSESGAAL*SRRLQLPQVAVCRG Trigger: CCCCCTACAAACTGCGACCTGTGGCAGCTGAAGTCTACGGGACCAAAGAGCAGCCCCGGACTCACTACTATGCGGTAGCAGTCGTGAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035077.8 ENSMUST00000196122.3 ENSMUST00000196777.5 ENSMUST00000198884.5 |
||
| CDS-3UTR CAA 90 bp | GTGACAGCAGGGAGTGAGGAGACCAGATGGTCTGAAGGCCCCCGGACCGTGGCTCCTCAGGCCTTGGAGTaGGTTCAGATGAAAGTTACT | + |
|
Preference number: 5 (lower is better) Translates to: VTAGSEETRWSEGPRTVAPQALE*VQMKVT Trigger: AGTAACTTTCATCTGAACCAACTCCAAGGCCTGAGG...AGCCACGGTCCGGGGGCCTTCAGACCATCTGGTCTCCTCACTCCCTGCTGTCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CAA 90 bp | CTACCTAAAGTGACAGCAGGGAGTGAGGAGACCAGATGGTCTGAAGGCCCCCGGGTTTTGCCGGGGATCTaGGCCAGACACTCAGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LPKVTAGSEETRWSEGPRVLPGI*ARHSVL Trigger: CAACACTGAGTGTCTGGCCAAGATCCCCGGCAAAAC...CCGGGGGCCTTCAGACCATCTGGTCTCCTCACTCCCTGCTGTCACTTTAGGTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000197575.2 |
||
| CDS-3UTR CAA 90 bp | CCTAAAGTGACAGCAGGGAGTGAGGAGACCAGATGGTCTGAAGGCCCCCGGACCCGGGAACACAGCTCTTaGAGAAGAACTTGGATACCG | + |
|
Preference number: 5 (lower is better) Translates to: PKVTAGSEETRWSEGPRTREHSS*RRTWIP Trigger: CGGTATCCAAGTTCTTCTCAAAGAGCTGTGTTCCCG...GGTCCGGGGGCCTTCAGACCATCTGGTCTCCTCACTCCCTGCTGTCACTTTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS CCA 90 bp | TACCGCTTCCTCAAGGGATGCAGGTGGCCCATTCCAATTCAGGTATaGACGAAGTGTCCCTATAGGGATTTTCCACCCCGCACTCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: YRFLKGCRWPIPIQV*TKCPYRDFPPRTPA Trigger: GGCAGGAGTGCGGGGTGGAAAATCCCTATAGGGACACTTCGTCCATACCTGAATTGGAATGGGCCACCTGCATCCCTTGAGGAAGCGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000196122.3 |
||
| CDS-3UTR CAA 90 bp | CTACCTAAAGTGACAGCAGGGAGTGAGGAGACCAGATGGTCTGAAGGCCCCCGGAGCCCCAGTGTAGCCTaGGTATCTCTCTTTGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LPKVTAGSEETRWSEGPRSPSVA*VSLFAV Trigger: AACAGCAAAGAGAGATACCAAGGCTACACTGGGGCT...CCGGGGGCCTTCAGACCATCTGGTCTCCTCACTCCCTGCTGTCACTTTAGGTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS TCA 90 bp | CAGGTTGGGGAATCTATCCTTTTGGGCACCGGGAACACAGCTCTTTaGGAAGAACTTGGATACCGCTTCCTCAAGGGATGCAGGTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QVGESILLGTGNTAL*EELGYRFLKGCRWP Trigger: GGGCCACCTGCATCCCTTGAGGAAGCGGTATCCAAGTTCTTCTCAAAGAGCTGTGTTCCCGGTGCCCAAAAGGATAGATTCCCCAACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000196122.3 |
||
| CDS CCA 90 bp | CAGCATAACCTGAGTATGGCTCCTCGGGGGAAGAGGCACATTTGTTaGCTCCTGTCCCTGCACACGAGCTACACAGGTTGGGGAATCTAT | + |
|
Preference number: 5 (lower is better) Translates to: QHNLSMAPRGKRHIC*LLSLHTSYTGWGIY Trigger: ATAGATTCCCCAACCTGTGTAGCTCGTGTGCAGGGACAGGAGCCAACAAATGTGCCTCTTCCCCCGAGGAGCCATACTCAGGTTATGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000196122.3 |
||
| CDS-3UTR CAA 90 bp | CCTAAAGTGACAGCAGGGAGTGAGGAGACCAGATGGTCTGAAGGCCCCCGGACCACCAGGGGCACAGCTTaGGCTAAAGAACTCATTAAA | + |
|
Preference number: 5 (lower is better) Translates to: PKVTAGSEETRWSEGPRTTRGTA*AKELIK Trigger: TTTAATGAGTTCTTTAGCCAAAGCTGTGCCCCTGGT...GGTCCGGGGGCCTTCAGACCATCTGGTCTCCTCACTCCCTGCTGTCACTTTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS TCA 90 bp | ATCTCCAGCATTGTCTCTCAGACACCTCAAGGCTCCAGCATAACCTaGGTATGGCTCCTCGGGGGAAGAGGCACATTTGTTGGCTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ISSIVSQTPQGSSIT*VWLLGGRGTFVGSC Trigger: ACAGGAGCCAACAAATGTGCCTCTTCCCCCGAGGAGCCATACTCAGGTTATGCTGGAGCCTTGAGGTGTCTGAGAGACAATGCTGGAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000196122.3 |
||
| CDS-3UTR CAA 90 bp | CACCCATACGCACGCATGATCTGGGGCACACAGATGCACATGTACTGTGATCTCCTCTTTGAGAAGAACTaGGATACCGCTTCCTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: HPYARMIWGTQMHMYCDLLFEKN*DTASSR Trigger: CCTTGAGGAAGCGGTATCCAAGTTCTTCTCAAAGAG...GAGATCACAGTACATGTGCATCTGTGTGCCCCAGATCATGCGTGCGTATGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CAA 90 bp | CAGATGCACATGTACTGTGATCTCTATGTGAAGAAACCAGATCCCCTGGGGACAGAAGAGGCACATTTGTaGGCTCCTGTCCCTGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: QMHMYCDLYVKKPDPLGTEEAHL*APVPAH Trigger: GTGTGCAGGGACAGGAGCCAACAAATGTGCCTCTTC...TGTCCCCAGGGGATCTGGTTTCTTCACATAGAGATCACAGTACATGTGCATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS CCA 90 bp | ATCTATCCTTTTGGGCACCGGGAACACAGCTCTTTGAGAAGAACTTaGATACCGCTTCCTCAAGGGATGCAGGTGGCCCATTCCAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: IYPFGHREHSSLRRT*IPLPQGMQVAHSNS Trigger: TGAATTGGAATGGGCCACCTGCATCCCTTGAGGAAGCGGTATCCAAGTTCTTCTCAAAGAGCTGTGTTCCCGGTGCCCAAAAGGATAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000196122.3 |
||
| CDS-3UTR CAA 90 bp | CACCCATACGCACGCATGATCTGGGGCACACAGATGCACATGTACTGTGATCTCCCCTTTCGGCTTTATTaGGTAACTCCTCAAATACCG | + |
|
Preference number: 5 (lower is better) Translates to: HPYARMIWGTQMHMYCDLPFRLY*VTPQIP Trigger: CGGTATTTGAGGAGTTACCAAATAAAGCCGAAAGGG...GAGATCACAGTACATGTGCATCTGTGTGCCCCAGATCATGCGTGCGTATGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CAA 90 bp | CAACACTACTTCATTTTATTTCTACCTAAAGTGACAGCAGGGAGTGAGGAGACCACCGGCTTCCAGGTGTaGTCTGGGCAGAGCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QHYFILFLPKVTAGSEETTGFQV*SGQSSL Trigger: CAAGCTGCTCTGCCCAGACAACACCTGGAAGCCGGT...GGTCTCCTCACTCCCTGCTGTCACTTTAGGTAGAAATAAAATGAAGTAGTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CAA 90 bp | TCTCTATGTGAAGAAACCAGATCCCCTGGGGACAGAAACATCACGTGGTTGTCCCTGTTGGGAGCACACTaGTTCTCACCCTTCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SLCEETRSPGDRNITWLSLLGAH*FSPFSS Trigger: TGATGAGAAGGGTGAGAACAAGTGTGCTCCCAACAG...GGACAACCACGTGATGTTTCTGTCCCCAGGGGATCTGGTTTCTTCACATAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CAA 90 bp | TGCCTGAAACTTCAGGATAAAGGAAGGGCTGGACCGAGAATCTCCAAAAGCAAGCACGAGCTACACAGGTaGGGGAATCTATCCTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CLKLQDKGRAGPRISKSKHELHR*GNLSFW Trigger: CCAAAAGGATAGATTCCCCAACCTGTGTAGCTCGTG...CTTGCTTTTGGAGATTCTCGGTCCAGCCCTTCCTTTATCCTGAAGTTTCAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS GCA 90 bp | TTGACACAACTGAGCGGCGGGCCACCCACTTTTCTCATCTCGTTCTaGCACCTTAAACATTTTTCTTCCTCAGAATTTGACACAGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: LTQLSGGPPTFLISF*HLKHFSSSEFDTAH Trigger: GTGTGCTGTGTCAAATTCTGAGGAAGAAAAATGTTTAAGGTGGCAGAACGAGATGAGAAAAGTGGGTGGCCCGCCGCTCAGTTGTGTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CAA 90 bp | TTCATTTTATTTCTACCTAAAGTGACAGCAGGGAGTGAGGAGACCAGATGGTCTGGGGAATCTATCCTTTaGGGCACCGGGAACACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FILFLPKVTAGSEETRWSGESIL*GTGNTA Trigger: AGCTGTGTTCCCGGTGCCCAAAAGGATAGATTCCCC...AGACCATCTGGTCTCCTCACTCCCTGCTGTCACTTTAGGTAGAAATAAAATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CAA 90 bp | TACGCACGCATGATCTGGGGCACACAGATGCACATGTACTGTGATCTCTATGTGTATCTCTCTTTGCTGTaGGGAGCACACTTGTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: YARMIWGTQMHMYCDLYVYLSLL*GAHLFS Trigger: TGAGAACAAGTGTGCTCCCAACAGCAAAGAGAGATA...CACATAGAGATCACAGTACATGTGCATCTGTGTGCCCCAGATCATGCGTGCGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS-3UTR CAA 90 bp | AAGGTGGATGGTGACATTCCAGATTGTCCTCTGGCTTTCACACGTGTGTGCACAGCCAGACACTCAGTGTaGTCATTGAACAGAAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: KVDGDIPDCPLAFTRVCTARHSV*SLNRRF Trigger: AAACCTTCTGTTCAATGACAACACTGAGTGTCTGGC...TGTGCACACACGTGTGAAAGCCAGAGGACAATCTGGAATGTCACCATCCACCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
||
| CDS CCA 90 bp | TATCTCTCTTTGCTGTTGGGAGCACACTTGTTCTCACCCTTCCACTaGTCTGTTCACACAATCCAAGCCATTGCTTTTGGAGGATTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: YLSLLLGAHLFSPFH*SVHTIQAIAFGGFL Trigger: CAGAAATCCTCCAAAAGCAATGGCTTGGATTGTGTGAACAGACCAGTGGAAGGGTGAGAACAAGTGTGCTCCCAACAGCAAAGAGAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199313.2 |
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| CDS-3UTR CAA 90 bp | ACTCAACACTACTTCATTTTATTTCTACCTAAAGTGACAGCAGGGAGTGAGGAGGTTTTGCCGGGGATCTaGGCCAGACACTCAGTGTTG | + |
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Preference number: 5 (lower is better) Translates to: TQHYFILFLPKVTAGSEEVLPGI*ARHSVL Trigger: CAACACTGAGTGTCTGGCCAAGATCCCCGGCAAAAC...CTCCTCACTCCCTGCTGTCACTTTAGGTAGAAATAAAATGAAGTAGTGTTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000197575.2 |
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| CDS GCA 90 bp | TTTAAGTTCCTAGCCCACTCTTCAGTGTTCTTCCCGTCAGTATTCTaGAAGACAGTGGAGTCCTTCAAAAATGCAACATTTCCTGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: FKFLAHSSVFFPSVF*KTVESFKNATFPAF Trigger: GAAGGCAGGAAATGTTGCATTTTTGAAGGACTCCACTGTCTTGCAGAATACTGACGGGAAGAACACTGAAGAGTGGGCTAGGAACTTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| CDS TCA 90 bp | CACCTTAAACATTTTTCTTCCTCAGAATTTGACACAGCACACCATTaGACAGTTGTTGCCTTAGCTAGACAGAGTCCAAGGGCCTCAAGA | + |
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Preference number: 5 (lower is better) Translates to: HLKHFSSSEFDTAHH*TVVALARQSPRASR Trigger: TCTTGAGGCCCTTGGACTCTGTCTAGCTAAGGCAACAACTGTTCAATGGTGTGCTGTGTCAAATTCTGAGGAAGAAAAATGTTTAAGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| CDS-3UTR CAA 90 bp | ACTCAACACTACTTCATTTTATTTCTACCTAAAGTGACAGCAGGGAGTGAGGAGTCCAAGCCATTGCTTTaGGAGGATTTCTGGTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: TQHYFILFLPKVTAGSEESKPLL*EDFWFS Trigger: AGAGAACCAGAAATCCTCCAAAAGCAATGGCTTGGA...CTCCTCACTCCCTGCTGTCACTTTAGGTAGAAATAAAATGAAGTAGTGTTGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| CDS-3UTR CAA 90 bp | ACTCAACACTACTTCATTTTATTTCTACCTAAAGTGACAGCAGGGAGTGAGGAGGCCAGACACTCAGTGTaGTCATTGAACAGAAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: TQHYFILFLPKVTAGSEEARHSV*SLNRRF Trigger: AAACCTTCTGTTCAATGACAACACTGAGTGTCTGGC...CTCCTCACTCCCTGCTGTCACTTTAGGTAGAAATAAAATGAAGTAGTGTTGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000197575.2 |
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| CDS-3UTR CAA 90 bp | TACTTCATTTTATTTCTACCTAAAGTGACAGCAGGGAGTGAGGAGACCAGATGGTTTCTTCCTCAGAATTaGACACAGCACACCATTGAA | + |
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Preference number: 5 (lower is better) Translates to: YFILFLPKVTAGSEETRWFLPQN*TQHTIE Trigger: TTCAATGGTGTGCTGTGTCAAATTCTGAGGAAGAAA...CCATCTGGTCTCCTCACTCCCTGCTGTCACTTTAGGTAGAAATAAAATGAAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| CDS-3UTR CAA 90 bp | GACACCTCATATGACGAGAAACTCAACACTACTTCATTTTATTTCTACCTAAAGAAGAACTCATTAAATTaGCAGGATCTGGTCTGGTTA | + |
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Preference number: 5 (lower is better) Translates to: DTSYDEKLNTTSFYFYLKKNSLN*QDLVWL Trigger: TAACCAGACCAGATCCTGCAAATTTAATGAGTTCTT...CTTTAGGTAGAAATAAAATGAAGTAGTGTTGAGTTTCTCGTCATATGAGGTGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| CDS TCA 72 bp | GGGAGCTGGAGCACTGCTTCAGGCGCTCGGTCGCTATaGCGTACTCCTTTCCCAGATACTTCTCCGATGTGG | + |
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Preference number: 6 (lower is better) Translates to: GSWSTASGARSL*RTPFPDTSPMW Trigger: CCACATCGGAGAAGTATCTGGGAAAGGAGTACGTCATAGCGACCGAGCGCCTGAAGCAGTGCTCCAGCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| CDS CCA 72 bp | CTGCTACCGCATAGTAGTGAGTCCGGGGCTGCTCTTTaGTCCCGTAGACTTCAGCTGCCACAGGTCGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: LLPHSSESGAAL*SRRLQLPQVAV Trigger: AACTGCGACCTGTGGCAGCTGAAGTCTACGGGACCAAAGAGCAGCCCCGGACTCACTACTATGCGGTAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035077.8 ENSMUST00000196122.3 ENSMUST00000196777.5 ENSMUST00000198884.5 |
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| CDS CCA 72 bp | CTGAGTATGGCTCCTCGGGGGAAGAGGCACATTTGTTaGCTCCTGTCCCTGCACACGAGCTACACAGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: LSMAPRGKRHIC*LLSLHTSYTGW Trigger: CCAACCTGTGTAGCTCGTGTGCAGGGACAGGAGCCAACAAATGTGCCTCTTCCCCCGAGGAGCCATACTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000196122.3 |
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| CDS CAA 72 bp | ACAATGGCCTGGATGCACTGGCGGGTGGAGGATTTCTaGACACAACTGAGCGGCGGGCCACCCACTTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: TMAWMHWRVEDF*TQLSGGPPTFL Trigger: GAGAAAAGTGGGTGGCCCGCCGCTCAGTTGTGTCAAGAAATCCTCCACCCGCCAGTGCATCCAGGCCATTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035077.8 ENSMUST00000196122.3 ENSMUST00000196777.5 ENSMUST00000198884.5 |
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| CDS CCA 72 bp | TGTTGGCTCCTGTCCCTGCACACGAGCTACACAGGTTaGGGAATCTATCCTTTTGGGCACCGGGAACACAGC | + |
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Preference number: 6 (lower is better) Translates to: CWLLSLHTSYTG*GIYPFGHREHS Trigger: GCTGTGTTCCCGGTGCCCAAAAGGATAGATTCCCCAACCTGTGTAGCTCGTGTGCAGGGACAGGAGCCAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000196122.3 |
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| CDS CAA 90 bp | CTGTTTGTCACAATGGCCTGGATGCACTGGCGGGTGGAGGATTTCTaGACACAACTGAGCGGCGGGCCACCCACTTTTCTCATCTCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LFVTMAWMHWRVEDF*TQLSGGPPTFLISF Trigger: GAACGAGATGAGAAAAGTGGGTGGCCCGCCGCTCAGTTGTGTCAAGAAATCCTCCACCCGCCAGTGCATCCAGGCCATTGTGACAAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| CDS GCA 72 bp | CTCGGGGGAAGAGGCACATTTGTTGGCTCCTGTCCCTaGACACGAGCTACACAGGTTGGGGAATCTATCCTT | + |
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Preference number: 6 (lower is better) Translates to: LGGRGTFVGSCP*TRATQVGESIL Trigger: AAGGATAGATTCCCCAACCTGTGTAGCTCGTGTGCAGGGACAGGAGCCAACAAATGTGCCTCTTCCCCCGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000196122.3 |
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| CDS CAA 72 bp | TTGTTGGCTCCTGTCCCTGCACACGAGCTACACAGGTaGGGGAATCTATCCTTTTGGGCACCGGGAACACAG | + |
|
Preference number: 6 (lower is better) Translates to: LLAPVPAHELHR*GNLSFWAPGTQ Trigger: CTGTGTTCCCGGTGCCCAAAAGGATAGATTCCCCAACCTGTGTAGCTCGTGTGCAGGGACAGGAGCCAACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000196122.3 |
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| CDS CAA 90 bp | GAGGCACATTTGTTGGCTCCTGTCCCTGCACACGAGCTACACAGGTaGGGGAATCTATCCTTTTGGGCACCGGGAACACAGCTCTTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: EAHLLAPVPAHELHR*GNLSFWAPGTQLFE Trigger: CTCAAAGAGCTGTGTTCCCGGTGCCCAAAAGGATAGATTCCCCAACCTGTGTAGCTCGTGTGCAGGGACAGGAGCCAACAAATGTGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000196122.3 |
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| CDS CCA 72 bp | CTCAAGGGATGCAGGTGGCCCATTCCAATTCAGGTATaGACGAAGTGTCCCTATAGGGATTTTCCACCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LKGCRWPIPIQV*TKCPYRDFPPR Trigger: GCGGGGTGGAAAATCCCTATAGGGACACTTCGTCCATACCTGAATTGGAATGGGCCACCTGCATCCCTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035077.8 ENSMUST00000196122.3 ENSMUST00000196777.5 |
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| CDS CCA 72 bp | TTTGGGCACCGGGAACACAGCTCTTTGAGAAGAACTTaGATACCGCTTCCTCAAGGGATGCAGGTGGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: FGHREHSSLRRT*IPLPQGMQVAH Trigger: ATGGGCCACCTGCATCCCTTGAGGAAGCGGTATCCAAGTTCTTCTCAAAGAGCTGTGTTCCCGGTGCCCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000196122.3 |
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| CDS CAA 90 bp | ACAGGTTGGGGAATCTATCCTTTTGGGCACCGGGAACACAGCTCTTaGAGAAGAACTTGGATACCGCTTCCTCAAGGGATGCAGGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TGWGIYPFGHREHSS*RRTWIPLPQGMQVA Trigger: GGCCACCTGCATCCCTTGAGGAAGCGGTATCCAAGTTCTTCTCAAAGAGCTGTGTTCCCGGTGCCCAAAAGGATAGATTCCCCAACCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000196122.3 |
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| CDS GCA 72 bp | GCTCCAGGTGAAGCCAGCATCTTCTCTTCTAACTGCTaGTACAGCAAGGTACCCTTCCACTGGTCTGTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: APGEASIFSSNC*YSKVPFHWSVH Trigger: GTGAACAGACCAGTGGAAGGGTACCTTGCTGTAGCAGCAGTTAGAAGAGAAGATGCTGGCTTCACCTGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| CDS CCA 72 bp | GAAGAACTTGGATACCGCTTCCTCAAGGGATGCAGGTaGCCCATTCCAATTCAGGTATGGACGAAGTGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: EELGYRFLKGCR*PIPIQVWTKCP Trigger: GGGACACTTCGTCCATACCTGAATTGGAATGGGCCACCTGCATCCCTTGAGGAAGCGGTATCCAAGTTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000196122.3 |
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| CDS CCA 72 bp | AAGCCCCAGTGTAGCCTTGGTATCTCTCTTTGCTGTTaGGAGCACACTTGTTCTCACCCTTCCACTGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: KPQCSLGISLCC*EHTCSHPSTGL Trigger: CAGACCAGTGGAAGGGTGAGAACAAGTGTGCTCCCAACAGCAAAGAGAGATACCAAGGCTACACTGGGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199313.2 |
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| CDS CAA 90 bp | AGGCTTCCAGGAGTGTCCTTTCCCAGATACTTCTCCGATGTGGTTTaGCCGGGGATCTTGGCCAGACACTCAGTGTTGTCATTGAACAGA | + |
|
Preference number: 6 (lower is better) Translates to: RLPGVSFPRYFSDVV*PGILARHSVLSLNR Trigger: TCTGTTCAATGACAACACTGAGTGTCTGGCCAAGATCCCCGGCAAAACCACATCGGAGAAGTATCTGGGAAAGGACACTCCTGGAAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197575.2 |
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| CDS TCA 72 bp | ATTGTCTCTCAGACACCTCAAGGCTCCAGCATAACCTaGGTATGGCTCCTCGGGGGAAGAGGCACATTTGTT | + |
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Preference number: 6 (lower is better) Translates to: IVSQTPQGSSIT*VWLLGGRGTFV Trigger: AACAAATGTGCCTCTTCCCCCGAGGAGCCATACTCAGGTTATGCTGGAGCCTTGAGGTGTCTGAGAGACAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000196122.3 |
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| CDS CCA 72 bp | GCACACGAGCTACACAGGTTGGGGAATCTATCCTTTTaGGCACCGGGAACACAGCTCTTTGAGAAGAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: AHELHRLGNLSF*APGTQLFEKNL Trigger: CAAGTTCTTCTCAAAGAGCTGTGTTCCCGGTGCCCAAAAGGATAGATTCCCCAACCTGTGTAGCTCGTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000196122.3 |
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| CDS TCA 72 bp | GAATCTATCCTTTTGGGCACCGGGAACACAGCTCTTTaGGAAGAACTTGGATACCGCTTCCTCAAGGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: ESILLGTGNTAL*EELGYRFLKGC Trigger: GCATCCCTTGAGGAAGCGGTATCCAAGTTCTTCTCAAAGAGCTGTGTTCCCGGTGCCCAAAAGGATAGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000196122.3 |
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| CDS GCA 72 bp | TCCTGGACACCTCTGTCCATTTCTCCCAAACTGAACTaGTGTTCTTCACGACTGCTACCGCATAGTAGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SWTPLSISPKLN*CSSRLLPHSSE Trigger: CTCACTACTATGCGGTAGCAGTCGTGAAGAACAGCAGTTCAGTTTGGGAGAAATGGACAGAGGTGTCCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198884.5 |
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| CDS CCA 72 bp | GGCTTCCAGGTGTTGTCTGGGCAGAGCAGCTTGTACTaGTCCCTTTCGGCTTTATTTGGTAACTCCTCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: GFQVLSGQSSLY*SLSALFGNSSN Trigger: ATTTGAGGAGTTACCAAATAAAGCCGAAAGGGACCAGTACAAGCTGCTCTGCCCAGACAACACCTGGAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| CDS CAA 72 bp | GGAATCTATCCTTTTGGGCACCGGGAACACAGCTCTTaGAGAAGAACTTGGATACCGCTTCCTCAAGGGATG | + |
|
Preference number: 6 (lower is better) Translates to: GIYPFGHREHSS*RRTWIPLPQGM Trigger: CATCCCTTGAGGAAGCGGTATCCAAGTTCTTCTCAAAGAGCTGTGTTCCCGGTGCCCAAAAGGATAGATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000196122.3 |
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| CDS CAA 72 bp | CCAGGGGCACAGCTTTGGCTAAAGAACTCATTAAATTaGCAGGATCTGGTCTGGTTAGCAAGCAGGCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: PGAQLWLKNSLN*QDLVWLASRPM Trigger: CATGGGCCTGCTTGCTAACCAGACCAGATCCTGCAAATTTAATGAGTTCTTTAGCCAAAGCTGTGCCCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| CDS CAA 90 bp | AGGTACCCTTCCACTGGTCTGTTCACACAATCCAAGCCATTGCTTTaGGAGGATTTCTGGTTCTCTGCCAAGACTGGAACTAAACCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RYPSTGLFTQSKPLL*EDFWFSAKTGTKPH Trigger: GTGCGGTTTAGTTCCAGTCTTGGCAGAGAACCAGAAATCCTCCAAAAGCAATGGCTTGGATTGTGTGAACAGACCAGTGGAAGGGTACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| CDS CAA 90 bp | TCTCACCCTTCCACTGGTCTGTTCACACAATCCAAGCCATTGCTTTaGGAGGATTTCTGGTTCTCTGCCAAGACTGGAACTAAACCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SHPSTGLFTQSKPLL*EDFWFSAKTGTKPH Trigger: GTGCGGTTTAGTTCCAGTCTTGGCAGAGAACCAGAAATCCTCCAAAAGCAATGGCTTGGATTGTGTGAACAGACCAGTGGAAGGGTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199313.2 |
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| CDS GCA 72 bp | CTGAGCGGCGGGCCACCCACTTTTCTCATCTCGTTCTaGCACCTTAAACATTTTTCTTCCTCAGAATTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LSGGPPTFLISF*HLKHFSSSEFD Trigger: GTCAAATTCTGAGGAAGAAAAATGTTTAAGGTGGCAGAACGAGATGAGAAAAGTGGGTGGCCCGCCGCTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| CDS GCA 72 bp | TTGGTTCAGATGAAAGTTACTGCTGTTCTTCACGACTaGTACCGCATAGTAGTGAGTCCGGGGCTGCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LVQMKVTAVLHD*YRIVVSPGLLF Trigger: AAAGAGCAGCCCCGGACTCACTACTATGCGGTAGCAGTCGTGAAGAACAGCAGTAACTTTCATCTGAACCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035077.8 ENSMUST00000196122.3 ENSMUST00000196777.5 |
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| CDS GCA 72 bp | ACCCTTCCACTGGTCTGTTCACACAATCCAAGCCATTaGTTTTGGAGGATTTCTGGTTCTCTGCCAAGACTG | + |
|
Preference number: 6 (lower is better) Translates to: TLPLVCSHNPSH*FWRISGSLPRL Trigger: CAGTCTTGGCAGAGAACCAGAAATCCTCCAAAAGCAATGGCTTGGATTGTGTGAACAGACCAGTGGAAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000199313.2 |
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| CDS CCA 72 bp | TTGCTGTTGGGAGCACACTTGTTCTCACCCTTCCACTaGTCTGTTCACACAATCCAAGCCATTGCTTTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LLLGAHLFSPFH*SVHTIQAIAFG Trigger: TCCAAAAGCAATGGCTTGGATTGTGTGAACAGACCAGTGGAAGGGTGAGAACAAGTGTGCTCCCAACAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199313.2 |
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| CDS CAA 72 bp | CACCCTTCCACTGGTCTGTTCACACAATCCAAGCCATaGCTTTTGGAGGATTTCTGGTTCTCTGCCAAGACT | + |
|
Preference number: 6 (lower is better) Translates to: HPSTGLFTQSKP*LLEDFWFSAKT Trigger: AGTCTTGGCAGAGAACCAGAAATCCTCCAAAAGCAATGGCTTGGATTGTGTGAACAGACCAGTGGAAGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199313.2 |
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| CDS CCA 72 bp | CCACTGGTCTGTTCACACAATCCAAGCCATTGCTTTTaGAGGATTTCTGGTTCTCTGCCAAGACTGGAACTA | + |
|
Preference number: 6 (lower is better) Translates to: PLVCSHNPSHCF*RISGSLPRLEL Trigger: TAGTTCCAGTCTTGGCAGAGAACCAGAAATCCTCCAAAAGCAATGGCTTGGATTGTGTGAACAGACCAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000199313.2 |
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| CDS CCA 72 bp | AGATTGGATTTGGGGTCAGCACCAGGGGCACAGCTTTaGCTAAAGAACTCATTAAATTTGCAGGATCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RLDLGSAPGAQL*LKNSLNLQDLV Trigger: GACCAGATCCTGCAAATTTAATGAGTTCTTTAGCCAAAGCTGTGCCCCTGGTGCTGACCCCAAATCCAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| CDS CAA 72 bp | TCCACTGGTCTGTTCACACAATCCAAGCCATTGCTTTaGGAGGATTTCTGGTTCTCTGCCAAGACTGGAACT | + |
|
Preference number: 6 (lower is better) Translates to: STGLFTQSKPLL*EDFWFSAKTGT Trigger: AGTTCCAGTCTTGGCAGAGAACCAGAAATCCTCCAAAAGCAATGGCTTGGATTGTGTGAACAGACCAGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035077.8 ENSMUST00000199313.2 |
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| CDS CAA 72 bp | TACCCTTCCACTGGTCTGTTCACACAATCCAAGCCATaGCTTTTGGAGGATTTCTGGTTCTCTGCCAAGACT | + |
|
Preference number: 6 (lower is better) Translates to: YPSTGLFTQSKP*LLEDFWFSAKT Trigger: AGTCTTGGCAGAGAACCAGAAATCCTCCAAAAGCAATGGCTTGGATTGTGTGAACAGACCAGTGGAAGGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| CDS GCA 72 bp | CTAGCCCACTCTTCAGTGTTCTTCCCGTCAGTATTCTaGAAGACAGTGGAGTCCTTCAAAAATGCAACATTT | + |
|
Preference number: 6 (lower is better) Translates to: LAHSSVFFPSVF*KTVESFKNATF Trigger: AAATGTTGCATTTTTGAAGGACTCCACTGTCTTGCAGAATACTGACGGGAAGAACACTGAAGAGTGGGCTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| CDS CCA 72 bp | CTTCAGTGTTCTTCCCGTCAGTATTCTGCAAGACAGTaGAGTCCTTCAAAAATGCAACATTTCCTGCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LQCSSRQYSARQ*SPSKMQHFLPS Trigger: AGAAGGCAGGAAATGTTGCATTTTTGAAGGACTCCACTGTCTTGCAGAATACTGACGGGAAGAACACTGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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| CDS TCA 72 bp | CATTTTTCTTCCTCAGAATTTGACACAGCACACCATTaGACAGTTGTTGCCTTAGCTAGACAGAGTCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: HFSSSEFDTAHH*TVVALARQSPR Trigger: CCTTGGACTCTGTCTAGCTAAGGCAACAACTGTTCAATGGTGTGCTGTGTCAAATTCTGAGGAAGAAAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035077.8 |
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