Pregenerated sensors for LTBR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030339Ensembl transcript IDs: ENSMUST00000032489.8
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTCAGGCTTGCTCAGGCGGTAGTCAGAGTCCTGGGCAGGCACTGTaGCCTGCTAGTGTCCGGTTCTGCTCTGAAGAGGTGTCTGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: SQACSGGSQSPGQAL*PASVRFCSEEVSEA Trigger: AGCCTCAGACACCTCTTCAGAGCAGAACCGGACACTAGCAGGCCACAGTGCCTGCCCAGGACTCTGACTACCGCCTGAGCAAGCCTGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| 3UTR GCA 90 bp | GTCCTGGTGAGTAGAGCAGCCTCAGAAAGAAGGTGCTGGACCCTCTaGTCCTTGCCTTTCCCAGGTGCCCTCAGGCACAGGTGGCAAATA | + |
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Preference number: 1 (lower is better) Translates to: VLVSRAASERRCWTL*SLPFPGALRHRWQI Trigger: TATTTGCCACCTGTGCCTGAGGGCACCTGGGAAAGGCAAGGAGCAGAGGGTCCAGCACCTTCTTTCTGAGGCTGCTCTACTCACCAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| 3UTR GCA 90 bp | GAGCTCTCAAGGCCTCTGAAGGTAGGGATGAGCACCACAAAGCTTTaGGAGGTCCCTGGGATATCCTTGCGAGTGACCCTGGGACCAGCT | + |
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Preference number: 1 (lower is better) Translates to: ELSRPLKVGMSTTKL*EVPGISLRVTLGPA Trigger: AGCTGGTCCCAGGGTCACTCGCAAGGATATCCCAGGGACCTCGCAAAGCTTTGTGGTGCTCATCCCTACCTTCAGAGGCCTTGAGAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| 3UTR GCA 90 bp | AGTCAGAGTCCTGGGCAGGCACTGTGGCCTGCTAGTGTCCGGTTCTaGTCTGAAGAGGTGTCTGAGGCTAAGTCCCTTAGGGCTCTATTT | + |
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Preference number: 1 (lower is better) Translates to: SQSPGQALWPASVRF*SEEVSEAKSLRALF Trigger: AAATAGAGCCCTAAGGGACTTAGCCTCAGACACCTCTTCAGAGCAGAACCGGACACTAGCAGGCCACAGTGCCTGCCCAGGACTCTGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGGGGTTGCTCCTCCGCGCGACTTCACCTTCCCCCAGGGTCTATCTTGGTCCTGGGCAGGCACTGTaGCCTGCTAGTGTCCGGTTC | + |
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Preference number: 2 (lower is better) Translates to: REGLLLRATSPSPRVYLGPGQAL*PASVRF Trigger: GAACCGGACACTAGCAGGCCACAGTGCCTGCCCAGG...ACCAAGATAGACCCTGGGGGAAGGTGAAGTCGCGCGGAGGAGCAACCCCTCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| 3UTR-3UTR GCA 90 bp | CTATCCTCTCCCCCAGGAGCAAGGGAGGGGTTGCTCCTCCGCGCGACTTCACCTAGGTGCTGGACCCTCTaGTCCTTGCCTTTCCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: LSSPPGAREGLLLRATSPRCWTL*SLPFPG Trigger: ACCTGGGAAAGGCAAGGAGCAGAGGGTCCAGCACCT...AGGTGAAGTCGCGCGGAGGAGCAACCCCTCCCTTGCTCCTGGGGGAGAGGATAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCTCCCCCAGGAGCAAGGGAGGGGTTGCTCCTCCGCGCGACTTCACCTTCCCTCAGAAAGAAGGTGCTaGACCCTCTGCTCCTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: PLPQEQGRGCSSARLHLPSERRC*TLCSLP Trigger: AGGCAAGGAGCAGAGGGTCCAGCACCTTCTTTCTGA...GGGAAGGTGAAGTCGCGCGGAGGAGCAACCCCTCCCTTGCTCCTGGGGGAGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCAAGGGAGGGGTTGCTCCTCCGCGCGACTTCACCTTCCCCCAGGGTCTATCCCCTGTGAGTCCTGGTaGGTAGAGCAGCCTCAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: EQGRGCSSARLHLPPGSIPCESW*VEQPQK Trigger: TTTCTGAGGCTGCTCTACTCACCAGGACTCACAGGG...GATAGACCCTGGGGGAAGGTGAAGTCGCGCGGAGGAGCAACCCCTCCCTTGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| 3UTR-3UTR GCA 90 bp | CTATCCTCTCCCCCAGGAGCAAGGGAGGGGTTGCTCCTCCGCGCGACTTCACCTGCCTCAGAAAGAAGGTaGTGGACCCTCTGCTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: LSSPPGAREGLLLRATSPASERR*WTLCSL Trigger: CAAGGAGCAGAGGGTCCAGCACCTTCTTTCTGAGGC...AGGTGAAGTCGCGCGGAGGAGCAACCCCTCCCTTGCTCCTGGGGGAGAGGATAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| 3UTR-3UTR TCA 90 bp | AGTCAGAGTCCTGGGCAGGCACTGTGGCCTGCTAGTGTCCGGTTCTGCTCTGAACCTCCCCAGACCCTGTaGGTCCTGGTGAGTAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: SQSPGQALWPASVRFCSEPPQTL*VLVSRA Trigger: TGCTCTACTCACCAGGACTCACAGGGTCTGGGGAGG...TTCAGAGCAGAACCGGACACTAGCAGGCCACAGTGCCTGCCCAGGACTCTGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| 3UTR-3UTR GCA 90 bp | AGCAAGGGAGGGGTTGCTCCTCCGCGCGACTTCACCTTCCCCCAGGGTCTATCTAGCACCACAAAGCTTTaGGAGGTCCCTGGGATATCC | + |
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Preference number: 2 (lower is better) Translates to: SKGGVAPPRDFTFPQGLSSTTKL*EVPGIS Trigger: GGATATCCCAGGGACCTCGCAAAGCTTTGTGGTGCT...AGATAGACCCTGGGGGAAGGTGAAGTCGCGCGGAGGAGCAACCCCTCCCTTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| 3UTR CCA 72 bp | TGCTCAGGCGGTAGTCAGAGTCCTGGGCAGGCACTGTaGCCTGCTAGTGTCCGGTTCTGCTCTGAAGAGGTG | + |
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Preference number: 3 (lower is better) Translates to: CSGGSQSPGQAL*PASVRFCSEEV Trigger: CACCTCTTCAGAGCAGAACCGGACACTAGCAGGCCACAGTGCCTGCCCAGGACTCTGACTACCGCCTGAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| 3UTR GCA 72 bp | AGTAGAGCAGCCTCAGAAAGAAGGTGCTGGACCCTCTaGTCCTTGCCTTTCCCAGGTGCCCTCAGGCACAGG | + |
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Preference number: 3 (lower is better) Translates to: SRAASERRCWTL*SLPFPGALRHR Trigger: CCTGTGCCTGAGGGCACCTGGGAAAGGCAAGGAGCAGAGGGTCCAGCACCTTCTTTCTGAGGCTGCTCTACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| 3UTR CCA 72 bp | CCTTCCTTGTGTCCGAGGCTCAATGGCCGAAGCCTCTaGGAGCCGGTGGGTCTGAAACTAGGTCTCAGGCTT | + |
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Preference number: 3 (lower is better) Translates to: PSLCPRLNGRSL*EPVGLKLGLRL Trigger: AAGCCTGAGACCTAGTTTCAGACCCACCGGCTCCCAGAGGCTTCGGCCATTGAGCCTCGGACACAAGGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| 3UTR CCA 72 bp | CCTCCGCGCGACTTCACCTTCCCCCAGGGTCTATCTTaGTCCACGCAATATGAGCTCTCAAGGCCTCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: PPRDFTFPQGLS*STQYELSRPLK Trigger: CTTCAGAGGCCTTGAGAGCTCATATTGCGTGGACCAAGATAGACCCTGGGGGAAGGTGAAGTCGCGCGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| 3UTR TCA 72 bp | CAAAGCTTTGCGAGGTCCCTGGGATATCCTTGCGAGTaGCCCTGGGACCAGCTCCCTCCTCTGCCATGTTTA | + |
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Preference number: 3 (lower is better) Translates to: QSFARSLGYPCE*PWDQLPPLPCL Trigger: TAAACATGGCAGAGGAGGGAGCTGGTCCCAGGGTCACTCGCAAGGATATCCCAGGGACCTCGCAAAGCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| 3UTR GCA 72 bp | AGGCCTCTGAAGGTAGGGATGAGCACCACAAAGCTTTaGGAGGTCCCTGGGATATCCTTGCGAGTGACCCTG | + |
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Preference number: 3 (lower is better) Translates to: RPLKVGMSTTKL*EVPGISLRVTL Trigger: CAGGGTCACTCGCAAGGATATCCCAGGGACCTCGCAAAGCTTTGTGGTGCTCATCCCTACCTTCAGAGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| 3UTR TCA 72 bp | TTAGGGCTCTATTTCTCAGAGCCTCCCCAGACCCTGTaGGTCCTGGTGAGTAGAGCAGCCTCAGAAAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: LGLYFSEPPQTL*VLVSRAASERR Trigger: CCTTCTTTCTGAGGCTGCTCTACTCACCAGGACTCACAGGGTCTGGGGAGGCTCTGAGAAATAGAGCCCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS-3UTR TCA 90 bp | GAGCAAGGGAGGGGTTGCTCCTCCGCGCGACTTCACCTTCCCCCAGGGTCTATCGGCACCAGCTGGGGCTaGGAGGCCACCAGAAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: EQGRGCSSARLHLPPGSIGTSWG*EATRSP Trigger: CGGGCTTCTGGTGGCCTCTCAGCCCCAGCTGGTGCC...GATAGACCCTGGGGGAAGGTGAAGTCGCGCGGAGGAGCAACCCCTCCCTTGCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS-3UTR CCA 90 bp | CTATCCTCTCCCCCAGGAGCAAGGGAGGGGTTGCTCCTCCGCGCGACTTCACCTAGGCTCAGGGGGAGCTaGAGGGTCTCCAGGGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: LSSPPGAREGLLLRATSPRLRGS*RVSRAP Trigger: CGGGGCCCTGGAGACCCTCCAGCTCCCCCTGAGCCT...AGGTGAAGTCGCGCGGAGGAGCAACCCCTCCCTTGCTCCTGGGGGAGAGGATAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS-3UTR TCA 90 bp | AGGAGCAAGGGAGGGGTTGCTCCTCCGCGCGACTTCACCTTCCCCCAGGGTCTACCACCAGAAGCCCGCTaGGTCCCAGCAGGAGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: RSKGGVAPPRDFTFPQGLPPEAR*VPAGVA Trigger: GGCCACTCCTGCTGGGACTCAGCGGGCTTCTGGTGG...TAGACCCTGGGGGAAGGTGAAGTCGCGCGGAGGAGCAACCCCTCCCTTGCTCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS-3UTR CCA 90 bp | CCTCTCCCCCAGGAGCAAGGGAGGGGTTGCTCCTCCGCGCGACTTCACCTTCCCCGAGTAGGAGGTACCTaGAGCTGCCTCCACCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: PLPQEQGRGCSSARLHLPRVGGT*SCLHQA Trigger: GGCCTGGTGGAGGCAGCTCCAGGTACCTCCTACTCG...GGGAAGGTGAAGTCGCGCGGAGGAGCAACCCCTCCCTTGCTCCTGGGGGAGAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS-3UTR TCA 90 bp | TATCCTCTCCCCCAGGAGCAAGGGAGGGGTTGCTCCTCCGCGCGACTTCACCTTCAGGACATCCCCGGCTaGCAGCGGCACTCGGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: YPLPQEQGRGCSSARLHLQDIPG*QRHSAF Trigger: GAAAGCCGAGTGCCGCTGTCAGCCGGGGATGTCCTG...AAGGTGAAGTCGCGCGGAGGAGCAACCCCTCCCTTGCTCCTGGGGGAGAGGATA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| 3UTR CAA 72 bp | AACACAGAGAGGCAGGGCGGGGGTCACGAGCCTTCCTaGTGTCCGAGGCTCAATGGCCGAAGCCTCTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: NTERQGGGHEPS*CPRLNGRSLWE Trigger: CTCCCAGAGGCTTCGGCCATTGAGCCTCGGACACAAGGAAGGCTCGTGACCCCCGCCCTGCCTCTCTGTGTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS-3UTR TCA 90 bp | TTGCGAGGTCCCTGGGATATCCTTGCGAGTGACCCTGGGACCAGCTCCCTCCTCCATCTGGTATGGGGTTaGCAGCGGGCTCGAGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LRGPWDILASDPGTSSLLHLVWG*QRARGE Trigger: CTCCCCTCGAGCCCGCTGTCAACCCCATACCAGATG...GAGGAGGGAGCTGGTCCCAGGGTCACTCGCAAGGATATCCCAGGGACCTCGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS-3UTR GCA 90 bp | TTGCGAGGTCCCTGGGATATCCTTGCGAGTGACCCTGGGACCAGCTCCCTCCTCGGAGGTACCTGGAGCTaGCTCCACCAGGCCCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: LRGPWDILASDPGTSSLLGGTWS*LHQALD Trigger: ATCCAGGGCCTGGTGGAGGCAGCTCCAGGTACCTCC...GAGGAGGGAGCTGGTCCCAGGGTCACTCGCAAGGATATCCCAGGGACCTCGCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS-3UTR GCA 90 bp | AGCAAGGGAGGGGTTGCTCCTCCGCGCGACTTCACCTTCCCCCAGGGTCTATCTCTGCAGAGAGACGGGTaGCTCATCCAGGCACAGGCC | + |
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Preference number: 4 (lower is better) Translates to: SKGGVAPPRDFTFPQGLSLQRDG*LIQAQA Trigger: GGCCTGTGCCTGGATGAGGCACCCGTCTCTCTGCAG...AGATAGACCCTGGGGGAAGGTGAAGTCGCGCGGAGGAGCAACCCCTCCCTTGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS-3UTR CCA 90 bp | AAGGGAGGGGTTGCTCCTCCGCGCGACTTCACCTTCCCCCAGGGTCTATCTTGGCAGGGGCGGCACAGCTaGCAGGTGGAGAGATGGTTC | + |
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Preference number: 4 (lower is better) Translates to: KGGVAPPRDFTFPQGLSWQGRHS*QVERWF Trigger: GAACCATCTCTCCACCTGCCAGCTGTGCCGCCCCTG...CCAAGATAGACCCTGGGGGAAGGTGAAGTCGCGCGGAGGAGCAACCCCTCCCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS-3UTR CCA 90 bp | CTATCCTCTCCCCCAGGAGCAAGGGAGGGGTTGCTCCTCCGCGCGACTTCACCTTCCAGCTCTCTGGCCTaGACCAGGGGACTCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LSSPPGAREGLLLRATSPSSSLA*TRGLCC Trigger: ACAGCAGAGTCCCCTGGTCCAGGCCAGAGAGCTGGA...AGGTGAAGTCGCGCGGAGGAGCAACCCCTCCCTTGCTCCTGGGGGAGAGGATAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS-3UTR CCA 90 bp | AAGGGAGGGGTTGCTCCTCCGCGCGACTTCACCTTCCCCCAGGGTCTATCTTGGATGCCATTCGCACCGTaGGCCACCTGGCCATGTTCC | + |
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Preference number: 4 (lower is better) Translates to: KGGVAPPRDFTFPQGLSWMPFAP*ATWPCS Trigger: GGAACATGGCCAGGTGGCCCACGGTGCGAATGGCAT...CCAAGATAGACCCTGGGGGAAGGTGAAGTCGCGCGGAGGAGCAACCCCTCCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS-3UTR CCA 90 bp | AAGGGAGGGGTTGCTCCTCCGCGCGACTTCACCTTCCCCCAGGGTCTATCTTGGTTCAGGAGTGGGGTATaGAGGCTCAGGGGGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: KGGVAPPRDFTFPQGLSWFRSGV*RLRGSW Trigger: CCAGCTCCCCCTGAGCCTCCATACCCCACTCCTGAA...CCAAGATAGACCCTGGGGGAAGGTGAAGTCGCGCGGAGGAGCAACCCCTCCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS-3UTR CCA 90 bp | AGTCAGAGTCCTGGGCAGGCACTGTGGCCTGCTAGTGTCCGGTTCTGCTCTGAACAGCCTCCAGCTCTCTaGCCTGGACCAGGGGACTCT | + |
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Preference number: 4 (lower is better) Translates to: SQSPGQALWPASVRFCSEQPPAL*PGPGDS Trigger: AGAGTCCCCTGGTCCAGGCCAGAGAGCTGGAGGCTG...TTCAGAGCAGAACCGGACACTAGCAGGCCACAGTGCCTGCCCAGGACTCTGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS-3UTR CCA 90 bp | GGTCTGAAACTAGGTCTCAGGCTTGCTCAGGCGGTAGTCAGAGTCCTGGGCAGGGCACCGTGGGCCACCTaGCCATGTTCCCCAGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: GLKLGLRLAQAVVRVLGRAPWAT*PCSPGS Trigger: TGAACCTGGGGAACATGGCCAGGTGGCCCACGGTGC...CCTGCCCAGGACTCTGACTACCGCCTGAGCAAGCCTGAGACCTAGTTTCAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| 3UTR CAA 72 bp | AGCACCACAAAGCTTTGCGAGGTCCCTGGGATATCCTaGCGAGTGACCCTGGGACCAGCTCCCTCCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: STTKLCEVPGIS*RVTLGPAPSSA Trigger: GGCAGAGGAGGGAGCTGGTCCCAGGGTCACTCGCAAGGATATCCCAGGGACCTCGCAAAGCTTTGTGGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS-3UTR TCA 90 bp | AAGGGAGGGGTTGCTCCTCCGCGCGACTTCACCTTCCCCCAGGGTCTATCTTGGAGGCCAGGACAGTGGTaGAGAGCAGAAAGAGGACCA | + |
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Preference number: 4 (lower is better) Translates to: KGGVAPPRDFTFPQGLSWRPGQW*RAERGP Trigger: TGGTCCTCTTTCTGCTCTTCACCACTGTCCTGGCCT...CCAAGATAGACCCTGGGGGAAGGTGAAGTCGCGCGGAGGAGCAACCCCTCCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS-3UTR GCA 90 bp | TTGCGAGGTCCCTGGGATATCCTTGCGAGTGACCCTGGGACCAGCTCCCTCCTCTATGGGGGCAAGTCTTaGAAACCGTGTCTTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LRGPWDILASDPGTSSLLYGGKS*KPCLGC Trigger: GCAGCCAAGACACGGTTTGCAAGACTTGCCCCCATA...GAGGAGGGAGCTGGTCCCAGGGTCACTCGCAAGGATATCCCAGGGACCTCGCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS-3UTR CCA 90 bp | AGTCAGAGTCCTGGGCAGGCACTGTGGCCTGCTAGTGTCCGGTTCTGCTCTGAAGGCACAGCTGGCAGGTaGAGAGATGGTTCCAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: SQSPGQALWPASVRFCSEGTAGR*RDGSSV Trigger: AACACTGGAACCATCTCTCCACCTGCCAGCTGTGCC...TTCAGAGCAGAACCGGACACTAGCAGGCCACAGTGCCTGCCCAGGACTCTGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS-3UTR CCA 90 bp | AGGGATGAGCACCACAAAGCTTTGCGAGGTCCCTGGGATATCCTTGCGAGTGACGCTTCTGTGCCAGGCTaGCAGAGTACAAGCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: RDEHHKALRGPWDILASDASVPG*QSTSRS Trigger: GGAGCGGCTTGTACTCTGCCAGCCTGGCACAGAAGC...GTCACTCGCAAGGATATCCCAGGGACCTCGCAAAGCTTTGTGGTGCTCATCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS-3UTR GCA 90 bp | TCCACACATGCTAACGCTACCCAAGGCCCCATCCTCCCCTTCTCTCTATCCTCTCCAGATGCCAAGCTTTaGCATCCTCCTGGTAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: STHANATQGPILPFSLSSPDAKL*HPPGRV Trigger: CACCCTACCAGGAGGATGGCAAAGCTTGGCATCTGG...AGAGGATAGAGAGAAGGGGAGGATGGGGCCTTGGGTAGCGTTAGCATGTGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| 3UTR CAA 72 bp | AAGGCCTCTGAAGGTAGGGATGAGCACCACAAAGCTTaGCGAGGTCCCTGGGATATCCTTGCGAGTGACCCT | + |
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Preference number: 4 (lower is better) Translates to: KASEGRDEHHKA*RGPWDILASDP Trigger: AGGGTCACTCGCAAGGATATCCCAGGGACCTCGCAAAGCTTTGTGGTGCTCATCCCTACCTTCAGAGGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS-3UTR CCA 90 bp | AGGGATGAGCACCACAAAGCTTTGCGAGGTCCCTGGGATATCCTTGCGAGTGACACAAGTCTCCAGACATaGGTAGGAGTGGCTCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: RDEHHKALRGPWDILASDTSLQT*VGVALP Trigger: TGGCAGAGCCACTCCTACCCATGTCTGGAGACTTGT...GTCACTCGCAAGGATATCCCAGGGACCTCGCAAAGCTTTGTGGTGCTCATCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS-3UTR CCA 90 bp | AGGGATGAGCACCACAAAGCTTTGCGAGGTCCCTGGGATATCCTTGCGAGTGACCATTGCTCCTGGCTCTaGGGGATTTTTACAGATGGT | + |
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Preference number: 4 (lower is better) Translates to: RDEHHKALRGPWDILASDHCSWL*GIFTDG Trigger: ACCATCTGTAAAAATCCCCCAGAGCCAGGAGCAATG...GTCACTCGCAAGGATATCCCAGGGACCTCGCAAAGCTTTGTGGTGCTCATCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS-3UTR CAA 90 bp | GGTCTCAGGCTTGCTCAGGCGGTAGTCAGAGTCCTGGGCAGGCACTGTGGCCTGCCCTCTGGGTGCCGCTaGAGCAGAGTACCCAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: GLRLAQAVVRVLGRHCGLPSGCR*SRVPSF Trigger: AAAGCTGGGTACTCTGCTCAAGCGGCACCCAGAGGG...CAGGCCACAGTGCCTGCCCAGGACTCTGACTACCGCCTGAGCAAGCCTGAGACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS-3UTR CAA 90 bp | TCTCAGGCTTGCTCAGGCGGTAGTCAGAGTCCTGGGCAGGCACTGTGGCCTGCTTGGCCAGCAGTAGCATaGCTCCTGGCTCTGGGGGAT | + |
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Preference number: 5 (lower is better) Translates to: SQACSGGSQSPGQALWPAWPAVA*LLALGD Trigger: ATCCCCCAGAGCCAGGAGCAATGCTACTGCTGGCCA...AGCAGGCCACAGTGCCTGCCCAGGACTCTGACTACCGCCTGAGCAAGCCTGAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS-3UTR CAA 90 bp | CCTCTGCCATGTTTAGAACACAGAGAGGCAGGGCGGGGGTCACGAGCCTTCCTTAATGTGGGTCGGCTCTaGGAGCGGGGCAAGGGGGAG | + |
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Preference number: 5 (lower is better) Translates to: PLPCLEHREAGRGSRAFLNVGRL*ERGKGE Trigger: CTCCCCCTTGCCCCGCTCCAAGAGCCGACCCACATT...AAGGAAGGCTCGTGACCCCCGCCCTGCCTCTCTGTGTTCTAAACATGGCAGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS CCA 90 bp | AACCGTGTCTTGGCTGCGGCTGCATACCGCAAAGACAAACTCGCCTaGGGGACAGCGGGAGCAGCAGACGTCGTGCATGGGCTCGTAGTA | + |
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Preference number: 5 (lower is better) Translates to: NRVLAAAAYRKDKLA*GTAGAADVVHGLVV Trigger: TACTACGAGCCCATGCACGACGTCTGCTGCTCCCGCTGTCCCCCAGGCGAGTTTGTCTTTGCGGTATGCAGCCGCAGCCAAGACACGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS-3UTR CAA 90 bp | CCTCTCCCCCAGGAGCAAGGGAGGGGTTGCTCCTCCGCGCGACTTCACCTTCCCCAGTGCACACACTCATaGTCCAGATACACACAGGAC | + |
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Preference number: 5 (lower is better) Translates to: PLPQEQGRGCSSARLHLPQCTHS*SRYTQD Trigger: GTCCTGTGTGTATCTGGACAATGAGTGTGTGCACTG...GGGAAGGTGAAGTCGCGCGGAGGAGCAACCCCTCCCTTGCTCCTGGGGGAGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS-3UTR CAA 90 bp | CCTCTGCCATGTTTAGAACACAGAGAGGCAGGGCGGGGGTCACGAGCCTTCCTTACATCTGGTATGGGGTaGACAGCGGGCTCGAGGGGA | + |
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Preference number: 5 (lower is better) Translates to: PLPCLEHREAGRGSRAFLTSGMG*TAGSRG Trigger: TCCCCTCGAGCCCGCTGTCAACCCCATACCAGATGT...AAGGAAGGCTCGTGACCCCCGCCCTGCCTCTCTGTGTTCTAAACATGGCAGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS CCA 90 bp | AGACAAACTCGCCTGGGGGACAGCGGGAGCAGCAGACGTCGTGCATaGGCTCGTAGTATTCCTTGTCCTGGTCCCAGCAAGTCTGGTTTT | + |
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Preference number: 5 (lower is better) Translates to: RQTRLGDSGSSRRRA*ARSIPCPGPSKSGF Trigger: AAAACCAGACTTGCTGGGACCAGGACAAGGAATACTACGAGCCCATGCACGACGTCTGCTGCTCCCGCTGTCCCCCAGGCGAGTTTGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS CCA 90 bp | TGGCCAGCAGTAGCATTGCTCCTGGCTCTGGGGGATTTTTACAGATaGTATCCGAGTAGGAGGTACCTGGAGCTGCCTCCACCAGGCCCT | + |
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Preference number: 5 (lower is better) Translates to: WPAVALLLALGDFYR*YPSRRYLELPPPGP Trigger: AGGGCCTGGTGGAGGCAGCTCCAGGTACCTCCTACTCGGATACCATCTGTAAAAATCCCCCAGAGCCAGGAGCAATGCTACTGCTGGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS CCA 90 bp | TGGCTCTGGGGGATTTTTACAGATGGTATCCGAGTAGGAGGTACCTaGAGCTGCCTCCACCAGGCCCTGGATCTCACATCTGGTATGGGG | + |
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Preference number: 5 (lower is better) Translates to: WLWGIFTDGIRVGGT*SCLHQALDLTSGMG Trigger: CCCCATACCAGATGTGAGATCCAGGGCCTGGTGGAGGCAGCTCCAGGTACCTCCTACTCGGATACCATCTGTAAAAATCCCCCAGAGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS CCA 90 bp | CCTCAAAGCCCAGCACAATGTCACAGGGGCGGCACAGCTGGCAGGTaGAGAGATGGTTCCAGTGTTCATTATAGGAATTATGGGGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: PQSPAQCHRGGTAGR*RDGSSVHYRNYGGK Trigger: CTTGCCCCCATAATTCCTATAATGAACACTGGAACCATCTCTCCACCTGCCAGCTGTGCCGCCCCTGTGACATTGTGCTGGGCTTTGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS CCA 90 bp | TCAGTATCCATAATTTCATCTGTGACCTCGGCTTCTGTGCCAGGCTaGCAGAGTACAAGCCGCTCCTCCTCACAGTGCACACACTCATTG | + |
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Preference number: 5 (lower is better) Translates to: SVSIISSVTSASVPG*QSTSRSSSQCTHSL Trigger: CAATGAGTGTGTGCACTGTGAGGAGGAGCGGCTTGTACTCTGCCAGCCTGGCACAGAAGCCGAGGTCACAGATGAAATTATGGATACTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS GCA 90 bp | AGAGATGGTTCCAGTGTTCATTATAGGAATTATGGGGGCAAGTCTTaGAAACCGTGTCTTGGCTGCGGCTGCATACCGCAAAGACAAACT | + |
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Preference number: 5 (lower is better) Translates to: RDGSSVHYRNYGGKS*KPCLGCGCIPQRQT Trigger: AGTTTGTCTTTGCGGTATGCAGCCGCAGCCAAGACACGGTTTGCAAGACTTGCCCCCATAATTCCTATAATGAACACTGGAACCATCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS CCA 72 bp | AGAAGGGCCAGGAGCTCCCTCTTCAGGAGTGGGGTATaGAGGCTCAGGGGGAGCTGGAGGGTCTCCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: RRARSSLFRSGV*RLRGSWRVSRA Trigger: GGCCCTGGAGACCCTCCAGCTCCCCCTGAGCCTCCATACCCCACTCCTGAAGAGGGAGCTCCTGGCCCTTCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS GCA 72 bp | TCAGCCTCCAGCTCTCTGGCCTGGACCAGGGGACTCTaGTGTTGTAGCACCACTTCCTCCAAGGAGGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: SASSSLAWTRGL*CCSTTSSKEGA Trigger: GGCCCCCTCCTTGGAGGAAGTGGTGCTACAACAGCAGAGTCCCCTGGTCCAGGCCAGAGAGCTGGAGGCTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS CCA 72 bp | CGCCTGGGGGACAGCGGGAGCAGCAGACGTCGTGCATaGGCTCGTAGTATTCCTTGTCCTGGTCCCAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: RLGDSGSSRRRA*ARSIPCPGPSK Trigger: CTTGCTGGGACCAGGACAAGGAATACTACGAGCCCATGCACGACGTCTGCTGCTCCCGCTGTCCCCCAGGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS CCA 72 bp | TTGGCTGCGGCTGCATACCGCAAAGACAAACTCGCCTaGGGGACAGCGGGAGCAGCAGACGTCGTGCATGGG | + |
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Preference number: 6 (lower is better) Translates to: LAAAAYRKDKLA*GTAGAADVVHG Trigger: CCCATGCACGACGTCTGCTGCTCCCGCTGTCCCCCAGGCGAGTTTGTCTTTGCGGTATGCAGCCGCAGCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS CCA 72 bp | CTGGAGCTGCCTCCACCAGGCCCTGGATCTCACATCTaGTATGGGGTTGACAGCGGGCTCGAGGGGAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LELPPPGPGSHI*YGVDSGLEGRK Trigger: CTTCCTCCCCTCGAGCCCGCTGTCAACCCCATACCAGATGTGAGATCCAGGGCCTGGTGGAGGCAGCTCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS CCA 72 bp | TGGCTCTGCCAGGTCAGGGAAATGTGGGTCGGCTCTTaGAGCGGGGCAAGGGGGAGATTCTTCTCCCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: WLCQVREMWVGS*SGARGRFFSLW Trigger: CCAGAGGGAGAAGAATCTCCCCCTTGCCCCGCTCCAAGAGCCGACCCACATTTCCCTGACCTGGCAGAGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS CAA 72 bp | GTGGCTCTGCCAGGTCAGGGAAATGTGGGTCGGCTCTaGGAGCGGGGCAAGGGGGAGATTCTTCTCCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: VALPGQGNVGRL*ERGKGEILLPL Trigger: CAGAGGGAGAAGAATCTCCCCCTTGCCCCGCTCCAAGAGCCGACCCACATTTCCCTGACCTGGCAGAGCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS CAA 90 bp | CTTGGAGCGGGGCAAGGGGGAGATTCTTCTCCCTCTGGGTGCCGCTaGAGCAGAGTACCCAGCTTTCTGCAGAGAGACGGGTGCCTCATC | + |
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Preference number: 6 (lower is better) Translates to: LGAGQGGDSSPSGCR*SRVPSFLQRDGCLI Trigger: GATGAGGCACCCGTCTCTCTGCAGAAAGCTGGGTACTCTGCTCAAGCGGCACCCAGAGGGAGAAGAATCTCCCCCTTGCCCCGCTCCAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS CAA 72 bp | GGGCAAGGGGGAGATTCTTCTCCCTCTGGGTGCCGCTaGAGCAGAGTACCCAGCTTTCTGCAGAGAGACGGG | + |
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Preference number: 6 (lower is better) Translates to: GQGGDSSPSGCR*SRVPSFLQRDG Trigger: CCCGTCTCTCTGCAGAAAGCTGGGTACTCTGCTCAAGCGGCACCCAGAGGGAGAAGAATCTCCCCCTTGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS TCA 72 bp | TCCACCAGGCCCTGGATCTCACATCTGGTATGGGGTTaGCAGCGGGCTCGAGGGGAGGAAGTGTTCTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: STRPWISHLVWG*QRARGEEVFWK Trigger: CTTCCAGAACACTTCCTCCCCTCGAGCCCGCTGTCAACCCCATACCAGATGTGAGATCCAGGGCCTGGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS TCA 72 bp | CACTCATTGTCCAGATACACACAGGACATCCCCGGCTaGCAGCGGCACTCGGCTTTCCGATCGCTGGTGCAA | + |
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Preference number: 6 (lower is better) Translates to: HSLSRYTQDIPG*QRHSAFRSLVQ Trigger: TTGCACCAGCGATCGGAAAGCCGAGTGCCGCTGTCAGCCGGGGATGTCCTGTGTGTATCTGGACAATGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS GCA 72 bp | TTGAGCAGAGTACCCAGCTTTCTGCAGAGAGACGGGTaGCTCATCCAGGCACAGGCCAGGACAGTGGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: LSRVPSFLQRDG*LIQAQARTVVK Trigger: CTTCACCACTGTCCTGGCCTGTGCCTGGATGAGGCACCCGTCTCTCTGCAGAAAGCTGGGTACTCTGCTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS TCA 72 bp | CCAGCACTGGCCCATTGTATATGTAGATGTTGCCGGTaGCAGTCACAGAGCCCCCGGTCACATGAATGCCAT | + |
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Preference number: 6 (lower is better) Translates to: PALAHCICRCCR*QSQSPRSHECH Trigger: ATGGCATTCATGTGACCGGGGGCTCTGTGACTGTCACCGGCAACATCTACATATACAATGGGCCAGTGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS CCA 72 bp | ATAATTTCATCTGTGACCTCGGCTTCTGTGCCAGGCTaGCAGAGTACAAGCCGCTCCTCCTCACAGTGCACA | + |
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Preference number: 6 (lower is better) Translates to: IISSVTSASVPG*QSTSRSSSQCT Trigger: TGTGCACTGTGAGGAGGAGCGGCTTGTACTCTGCCAGCCTGGCACAGAAGCCGAGGTCACAGATGAAATTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS CCA 72 bp | GGGATTTTTACAGATGGTATCCGAGTAGGAGGTACCTaGAGCTGCCTCCACCAGGCCCTGGATCTCACATCT | + |
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Preference number: 6 (lower is better) Translates to: GIFTDGIRVGGT*SCLHQALDLTS Trigger: AGATGTGAGATCCAGGGCCTGGTGGAGGCAGCTCCAGGTACCTCCTACTCGGATACCATCTGTAAAAATCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS CCA 72 bp | GTAGCATTGCTCCTGGCTCTGGGGGATTTTTACAGATaGTATCCGAGTAGGAGGTACCTGGAGCTGCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: VALLLALGDFYR*YPSRRYLELPP Trigger: TGGAGGCAGCTCCAGGTACCTCCTACTCGGATACCATCTGTAAAAATCCCCCAGAGCCAGGAGCAATGCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS CAA 90 bp | GGGGAGGAAGTGTTCTGGAAGTGTCCCGGCTTACAGGGGACACAGTaGACGTCAGTATCCATAATTTCATCTGTGACCTCGGCTTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: GEEVFWKCPGLQGTQ*TSVSIISSVTSASV Trigger: CACAGAAGCCGAGGTCACAGATGAAATTATGGATACTGACGTCAACTGTGTCCCCTGTAAGCCGGGACACTTCCAGAACACTTCCTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS CCA 72 bp | CCAGCACAATGTCACAGGGGCGGCACAGCTGGCAGGTaGAGAGATGGTTCCAGTGTTCATTATAGGAATTAT | + |
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Preference number: 6 (lower is better) Translates to: PAQCHRGGTAGR*RDGSSVHYRNY Trigger: ATAATTCCTATAATGAACACTGGAACCATCTCTCCACCTGCCAGCTGTGCCGCCCCTGTGACATTGTGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS GCA 72 bp | TCCAGTGTTCATTATAGGAATTATGGGGGCAAGTCTTaGAAACCGTGTCTTGGCTGCGGCTGCATACCGCAA | + |
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Preference number: 6 (lower is better) Translates to: SSVHYRNYGGKS*KPCLGCGCIPQ Trigger: TTGCGGTATGCAGCCGCAGCCAAGACACGGTTTGCAAGACTTGCCCCCATAATTCCTATAATGAACACTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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| CDS CAA 72 bp | GTGTTCTGGAAGTGTCCCGGCTTACAGGGGACACAGTaGACGTCAGTATCCATAATTTCATCTGTGACCTCG | + |
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Preference number: 6 (lower is better) Translates to: VFWKCPGLQGTQ*TSVSIISSVTS Trigger: CGAGGTCACAGATGAAATTATGGATACTGACGTCAACTGTGTCCCCTGTAAGCCGGGACACTTCCAGAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032489.8 |
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