Pregenerated sensors for LTA4H (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015889Ensembl transcript IDs: ENSMUST00000016033.9
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GTCCCGGTCAGCGTCCGGCGAGCGAAGTCGACGCTGCAGCGAAGATaGAGGTGCTGGGTTCGGCAGACCGAGGCTGGAGAAGCCAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: VPVSVRRAKSTLQRR*RCWVRQTEAGEAKE Trigger: CTCCTTGGCTTCTCCAGCCTCGGTCTGCCGAACCCAGCACCTCCATCTTCGCTGCAGCGTCGACTTCGCTCGCCGGACGCTGACCGGGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS TCA 90 bp | GAGGTCTTTTGTGTCCAAAGTCAGGCTGCGCAGATTCTCCTCCTGTaGCTGGACCGTGAGCGCGGCCGTCCCGGTCAGCGTCCGGCGAGC | + |
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Preference number: 5 (lower is better) Translates to: EVFCVQSQAAQILLL*LDRERGRPGQRPAS Trigger: GCTCGCCGGACGCTGACCGGGACGGCCGCGCTCACGGTCCAGTCACAGGAGGAGAATCTGCGCAGCCTGACTTTGGACACAAAAGACCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS GCA 90 bp | GTCAGCGTCCGGCGAGCGAAGTCGACGCTGCAGCGAAGATGGAGGTaGTGGGTTCGGCAGACCGAGGCTGGAGAAGCCAAGGAGCAAGTA | + |
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Preference number: 5 (lower is better) Translates to: VSVRRAKSTLQRRWR*WVRQTEAGEAKEQV Trigger: TACTTGCTCCTTGGCTTCTCCAGCCTCGGTCTGCCGAACCCAGCACCTCCATCTTCGCTGCAGCGTCGACTTCGCTCGCCGGACGCTGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS CCA 90 bp | AGCGTCCGGCGAGCGAAGTCGACGCTGCAGCGAAGATGGAGGTGCTaGGTTCGGCAGACCGAGGCTGGAGAAGCCAAGGAGCAAGTATCC | + |
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Preference number: 5 (lower is better) Translates to: SVRRAKSTLQRRWRC*VRQTEAGEAKEQVS Trigger: GGATACTTGCTCCTTGGCTTCTCCAGCCTCGGTCTGCCGAACCCAGCACCTCCATCTTCGCTGCAGCGTCGACTTCGCTCGCCGGACGCT 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS CCA 90 bp | TCTTTTGTGTCCAAAGTCAGGCTGCGCAGATTCTCCTCCTGTGACTaGACCGTGAGCGCGGCCGTCCCGGTCAGCGTCCGGCGAGCGAAG | + |
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Preference number: 5 (lower is better) Translates to: SFVSKVRLRRFSSCD*TVSAAVPVSVRRAK Trigger: CTTCGCTCGCCGGACGCTGACCGGGACGGCCGCGCTCACGGTCCAGTCACAGGAGGAGAATCTGCGCAGCCTGACTTTGGACACAAAAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS TCA 90 bp | TGGGGTCTTCTGGGTCAGGGGCTTCTCCATCACGGATGGCACTCATaGGAGCCACCAGTTCTTTCGGGACAGACACCTCTGCGGTGTACG | + |
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Preference number: 5 (lower is better) Translates to: WGLLGQGLLHHGWHS*EPPVLSGQTPLRCT Trigger: CGTACACCGCAGAGGTGTCTGTCCCGAAAGAACTGGTGGCTCTCATGAGTGCCATCCGTGATGGAGAAGCCCCTGACCCAGAAGACCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS TCA 90 bp | GTGGATGGCCTGGCACTGACTGAAGAGATACGGATGCTGCTTCCCTaGCGTCTGTTCAGGAGTGAGCCACTGAAGCGCAGAGGATTTGGG | + |
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Preference number: 5 (lower is better) Translates to: VDGLALTEEIRMLLP*RLFRSEPLKRRGFG Trigger: CCCAAATCCTCTGCGCTTCAGTGGCTCACTCCTGAACAGACGTCAGGGAAGCAGCATCCGTATCTCTTCAGTCAGTGCCAGGCCATCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS GCA 90 bp | GTTGTACACCTCTTGCATTCGCTTTATGTGCCCCAAGGGAAGAGGTaGCTTCTGAAGCACCTGTGCCAGGAACTCATTCAGCTGATGGGA | + |
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Preference number: 5 (lower is better) Translates to: VVHLLHSLYVPQGKR*LLKHLCQELIQLMG Trigger: TCCCATCAGCTGAATGAGTTCCTGGCACAGGTGCTTCAGAAGGCACCTCTTCCCTTGGGGCACATAAAGCGAATGCAAGAGGTGTACAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS CCA 90 bp | CTTTCAGATCTCTCCCCACCAGCATCGCAGTCACGGGATGCATGCTaGCTTTATGCTCTTGGTAGGTGTGGACAGCTTGATCATGGGATT | + |
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Preference number: 5 (lower is better) Translates to: LSDLSPPASQSRDAC*LYALGRCGQLDHGI Trigger: AATCCCATGATCAAGCTGTCCACACCTACCAAGAGCATAAAGCCAGCATGCATCCCGTGACTGCGATGCTGGTGGGGAGAGATCTGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS CCA 90 bp | GCTGTTCAAGGTAGAAGAGTAGCGCAAAGCCCTTCTCATAGGGGATaGAGGAATAGGCTACATCGGGGTCTACGTCCTTCAGATCAACCA | + |
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Preference number: 5 (lower is better) Translates to: AVQGRRVAQSPSHRG*RNRLHRGLRPSDQP Trigger: TGGTTGATCTGAAGGACGTAGACCCCGATGTAGCCTATTCCTCCATCCCCTATGAGAAGGGCTTTGCGCTACTCTTCTACCTTGAACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS TCA 90 bp | AGATACGGATGCTGCTTCCCTGACGTCTGTTCAGGAGTGAGCCACTaGAGCGCAGAGGATTTGGGAGATGTCTCAAAGGAAATTTCTATA | + |
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Preference number: 5 (lower is better) Translates to: RYGCCFPDVCSGVSH*SAEDLGDVSKEISI Trigger: TATAGAAATTTCCTTTGAGACATCTCCCAAATCCTCTGCGCTTCAGTGGCTCACTCCTGAACAGACGTCAGGGAAGCAGCATCCGTATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS TCA 90 bp | CTCTTGATTTTTGCTCAGGGCGATGGGAAGAGAGATTTCCATCGGTaGCCCTTTGTAACCTTGACTTTCTCCAAGGGTGTATTTGACTTC | + |
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Preference number: 5 (lower is better) Translates to: LLIFAQGDGKRDFHR*PFVTLTFSKGVFDF Trigger: GAAGTCAAATACACCCTTGGAGAAAGTCAAGGTTACAAAGGGTCACCGATGGAAATCTCTCTTCCCATCGCCCTGAGCAAAAATCAAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS TCA 90 bp | GTTGCCATCTTTAGGGCCAAAGGAATTGCTTCCTCCCATTTCGATTaGATGCAGAGCCGTAACCATCTGAATCGTATTTCAGAATTGTTA | + |
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Preference number: 5 (lower is better) Translates to: VAIFRAKGIASSHFD*MQSRNHLNRISELL Trigger: TAACAATTCTGAAATACGATTCAGATGGTTACGGCTCTGCATTCAATCGAAATGGGAGGAAGCAATTCCTTTGGCCCTAAAGATGGCAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS CCA 72 bp | TCCAAAGTCAGGCTGCGCAGATTCTCCTCCTGTGACTaGACCGTGAGCGCGGCCGTCCCGGTCAGCGTCCGG | + |
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Preference number: 6 (lower is better) Translates to: SKVRLRRFSSCD*TVSAAVPVSVR Trigger: CCGGACGCTGACCGGGACGGCCGCGCTCACGGTCCAGTCACAGGAGGAGAATCTGCGCAGCCTGACTTTGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS TCA 72 bp | TGTGTCCAAAGTCAGGCTGCGCAGATTCTCCTCCTGTaGCTGGACCGTGAGCGCGGCCGTCCCGGTCAGCGT | + |
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Preference number: 6 (lower is better) Translates to: CVQSQAAQILLL*LDRERGRPGQR Trigger: ACGCTGACCGGGACGGCCGCGCTCACGGTCCAGTCACAGGAGGAGAATCTGCGCAGCCTGACTTTGGACACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS CCA 72 bp | CGAGCGAAGTCGACGCTGCAGCGAAGATGGAGGTGCTaGGTTCGGCAGACCGAGGCTGGAGAAGCCAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: RAKSTLQRRWRC*VRQTEAGEAKE Trigger: CTCCTTGGCTTCTCCAGCCTCGGTCTGCCGAACCCAGCACCTCCATCTTCGCTGCAGCGTCGACTTCGCTCG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS TCA 72 bp | GGAGGATGGCCCTGCAGTGGATGGCCTGGCACTGACTaGAGAGATACGGATGCTGCTTCCCTGACGTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: GGWPCSGWPGTD*RDTDAASLTSV Trigger: AACAGACGTCAGGGAAGCAGCATCCGTATCTCTTCAGTCAGTGCCAGGCCATCCACTGCAGGGCCATCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS TCA 72 bp | CTGGGTCAGGGGCTTCTCCATCACGGATGGCACTCATaGGAGCCACCAGTTCTTTCGGGACAGACACCTCTG | + |
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Preference number: 6 (lower is better) Translates to: LGQGLLHHGWHS*EPPVLSGQTPL Trigger: CAGAGGTGTCTGTCCCGAAAGAACTGGTGGCTCTCATGAGTGCCATCCGTGATGGAGAAGCCCCTGACCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS GCA 72 bp | GTGCCCCAAGGGAAGAGGTGCCTTCTGAAGCACCTGTaGCAGGAACTCATTCAGCTGATGGGACGAGAGATC | + |
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Preference number: 6 (lower is better) Translates to: VPQGKRCLLKHL*QELIQLMGREI Trigger: GATCTCTCGTCCCATCAGCTGAATGAGTTCCTGGCACAGGTGCTTCAGAAGGCACCTCTTCCCTTGGGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS CAA 90 bp | CCCCACCAGCATCGCAGTCACGGGATGCATGCTGGCTTTATGCTCTaGGTAGGTGTGGACAGCTTGATCATGGGATTTGTCGAAGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: PHQHRSHGMHAGFML*VGVDSLIMGFVEGS Trigger: GCTGCCTTCGACAAATCCCATGATCAAGCTGTCCACACCTACCAAGAGCATAAAGCCAGCATGCATCCCGTGACTGCGATGCTGGTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS CCA 72 bp | CTCTCCCCACCAGCATCGCAGTCACGGGATGCATGCTaGCTTTATGCTCTTGGTAGGTGTGGACAGCTTGAT | + |
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Preference number: 6 (lower is better) Translates to: LSPPASQSRDAC*LYALGRCGQLD Trigger: ATCAAGCTGTCCACACCTACCAAGAGCATAAAGCCAGCATGCATCCCGTGACTGCGATGCTGGTGGGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS TCA 72 bp | GATACGGATGCTGCTTCCCTGACGTCTGTTCAGGAGTaGGCCACTGAAGCGCAGAGGATTTGGGAGATGTCT | + |
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Preference number: 6 (lower is better) Translates to: DTDAASLTSVQE*ATEAQRIWEMS Trigger: AGACATCTCCCAAATCCTCTGCGCTTCAGTGGCTCACTCCTGAACAGACGTCAGGGAAGCAGCATCCGTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS TCA 72 bp | TGCTGCTTCCCTGACGTCTGTTCAGGAGTGAGCCACTaGAGCGCAGAGGATTTGGGAGATGTCTCAAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: CCFPDVCSGVSH*SAEDLGDVSKE Trigger: TTCCTTTGAGACATCTCCCAAATCCTCTGCGCTTCAGTGGCTCACTCCTGAACAGACGTCAGGGAAGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS GCA 72 bp | CTCTTGCATTCGCTTTATGTGCCCCAAGGGAAGAGGTaGCTTCTGAAGCACCTGTGCCAGGAACTCATTCAG | + |
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Preference number: 6 (lower is better) Translates to: LLHSLYVPQGKR*LLKHLCQELIQ Trigger: CTGAATGAGTTCCTGGCACAGGTGCTTCAGAAGGCACCTCTTCCCTTGGGGCACATAAAGCGAATGCAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS CCA 72 bp | GGTAGAAGAGTAGCGCAAAGCCCTTCTCATAGGGGATaGAGGAATAGGCTACATCGGGGTCTACGTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: GRRVAQSPSHRG*RNRLHRGLRPS Trigger: TGAAGGACGTAGACCCCGATGTAGCCTATTCCTCCATCCCCTATGAGAAGGGCTTTGCGCTACTCTTCTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS CAA 72 bp | CATCGCAGTCACGGGATGCATGCTGGCTTTATGCTCTaGGTAGGTGTGGACAGCTTGATCATGGGATTTGTC | + |
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Preference number: 6 (lower is better) Translates to: HRSHGMHAGFML*VGVDSLIMGFV Trigger: GACAAATCCCATGATCAAGCTGTCCACACCTACCAAGAGCATAAAGCCAGCATGCATCCCGTGACTGCGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS CAA 72 bp | CAGGCCCGGAGCGTAGAGCCAGGTGTTCCAATCAACTaGATTGAGAAGATCCACCTTGTCTTTAAAGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: QARSVEPGVPIN*IEKIHLVFKVG Trigger: TCCCACTTTAAAGACAAGGTGGATCTTCTCAATCAAGTTGATTGGAACACCTGGCTCTACGCTCCGGGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS GCA 72 bp | TCAGAATTGTTAATGGCATTGAAGTTGTACACCTCTTaGATTCGCTTTATGTGCCCCAAGGGAAGAGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: SELLMALKLYTS*IRFMCPKGRGA Trigger: GGCACCTCTTCCCTTGGGGCACATAAAGCGAATGCAAGAGGTGTACAACTTCAATGCCATTAACAATTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS CAA 72 bp | TTCCTTGTTCAGTTGCCATCTTTAGGGCCAAAGGAATaGCTTCCTCCCATTTCGATTGAATGCAGAGCCGTA | + |
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Preference number: 6 (lower is better) Translates to: FLVQLPSLGPKE*LPPISIECRAV Trigger: TACGGCTCTGCATTCAATCGAAATGGGAGGAAGCAATTCCTTTGGCCCTAAAGATGGCAACTGAACAAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS CAA 72 bp | TTCAGAATTGTTAATGGCATTGAAGTTGTACACCTCTaGCATTCGCTTTATGTGCCCCAAGGGAAGAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: FRIVNGIEVVHL*HSLYVPQGKRC Trigger: GCACCTCTTCCCTTGGGGCACATAAAGCGAATGCAAGAGGTGTACAACTTCAATGCCATTAACAATTCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS TCA 72 bp | TTTAGGGCCAAAGGAATTGCTTCCTCCCATTTCGATTaGATGCAGAGCCGTAACCATCTGAATCGTATTTCA | + |
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Preference number: 6 (lower is better) Translates to: FRAKGIASSHFD*MQSRNHLNRIS Trigger: TGAAATACGATTCAGATGGTTACGGCTCTGCATTCAATCGAAATGGGAGGAAGCAATTCCTTTGGCCCTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS CAA 90 bp | CGTAACCATCTGAATCGTATTTCAGAATTGTTAATGGCATTGAAGTaGTACACCTCTTGCATTCGCTTTATGTGCCCCAAGGGAAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: RNHLNRISELLMALK*YTSCIRFMCPKGRG Trigger: ACCTCTTCCCTTGGGGCACATAAAGCGAATGCAAGAGGTGTACAACTTCAATGCCATTAACAATTCTGAAATACGATTCAGATGGTTACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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| CDS CAA 72 bp | GTAACCTTGACTTTCTCCAAGGGTGTATTTGACTTCTaGTCCATTGATCACCACTTTTTCTATTGTGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: VTLTFSKGVFDF*SIDHHFFYCEV Trigger: GACCTCACAATAGAAAAAGTGGTGATCAATGGACAAGAAGTCAAATACACCCTTGGAGAAAGTCAAGGTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016033.9 |
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