Pregenerated sensors for LSS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033105Ensembl transcript IDs: ENSMUST00000048678.7, ENSMUST00000163049.2
Found 162 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGATGGTGGCAGCTGGGCAACAGGCAGAGGGCACAAAGTGCACCATaGCCAAAGGCTGCCCTAGAGGGTCCTGCACAGGGGAATGGGGAT | + |
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Preference number: 1 (lower is better) Translates to: RWWQLGNRQRAQSAP*PKAALEGPAQGNGD Trigger: ATCCCCATTCCCCTGTGCAGGACCCTCTAGGGCAGCCTTTGGCCATGGTGCACTTTGTGCCCTCTGCCTGTTGCCCAGCTGCCACCATCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR GCA 90 bp | AAGGTGTCGATGGTGGCAGCTGGGCAACAGGCAGAGGGCACAAAGTaGACCATGGCCAAAGGCTGCCCTAGAGGGTCCTGCACAGGGGAA | + |
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Preference number: 1 (lower is better) Translates to: KVSMVAAGQQAEGTK*TMAKGCPRGSCTGE Trigger: TTCCCCTGTGCAGGACCCTCTAGGGCAGCCTTTGGCCATGGTGCACTTTGTGCCCTCTGCCTGTTGCCCAGCTGCCACCATCGACACCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR CCA 90 bp | TGCACCATGGCCAAAGGCTGCCCTAGAGGGTCCTGCACAGGGGAATaGGGATCAGACACAGCTTTCTGCTTGTCGGAGGGAAGACTATGG | + |
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Preference number: 1 (lower is better) Translates to: CTMAKGCPRGSCTGE*GSDTAFCLSEGRLW Trigger: CCATAGTCTTCCCTCCGACAAGCAGAAAGCTGTGTCTGATCCCCATTCCCCTGTGCAGGACCCTCTAGGGCAGCCTTTGGCCATGGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR GCA 90 bp | TCCCTCGGGGAGAACGAATACCCAGGAGCTTCCGAGTCCATCCACTaGGCCTCTCTGGATCTCAAGGCTCATCTTCTTCCCTTTCTCACT | + |
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Preference number: 1 (lower is better) Translates to: SLGENEYPGASESIH*ASLDLKAHLLPFLT Trigger: AGTGAGAAAGGGAAGAAGATGAGCCTTGAGATCCAGAGAGGCGCAGTGGATGGACTCGGAAGCTCCTGGGTATTCGTTCTCCCCGAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR GCA 90 bp | CCTAGAGGGTCCTGCACAGGGGAATGGGGATCAGACACAGCTTTCTaGTTGTCGGAGGGAAGACTATGGGTCAGGGAGCGATTGGAGATA | + |
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Preference number: 1 (lower is better) Translates to: PRGSCTGEWGSDTAF*LSEGRLWVRERLEI Trigger: TATCTCCAATCGCTCCCTGACCCATAGTCTTCCCTCCGACAAGCAGAAAGCTGTGTCTGATCCCCATTCCCCTGTGCAGGACCCTCTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR CCA 90 bp | ATACTTTGTCAGAGAGACTTAACCATCAAGCCCTTCAGCAGGGGATaGTGGCACACGCCTGTATCCCAGCGCTCTGAAGGTGGAGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: ILCQRDLTIKPFSRG*WHTPVSQRSEGGGR Trigger: CCTGCCTCCACCTTCAGAGCGCTGGGATACAGGCGTGTGCCACCATCCCCTGCTGAAGGGCTTGATGGTTAAGTCTCTCTGACAAAGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR GCA 90 bp | CACCTGCCATTGAGCCTTTCTCTGAGCACCCCTGCACCATATGGCTaGTCTAACTCCCTCAGCACAGCAAACACAAGATGCTCAAGTGCC | + |
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Preference number: 1 (lower is better) Translates to: HLPLSLSLSTPAPYG*SNSLSTANTRCSSA Trigger: GGCACTTGAGCATCTTGTGTTTGCTGTGCTGAGGGAGTTAGAGCAGCCATATGGTGCAGGGGTGCTCAGAGAAAGGCTCAATGGCAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR TCA 90 bp | AGGGAAGCAGTGAAGAAGCCAGCTGCTCCCTCACAGGGAAGTCATTaGTCACAGAAGCTCTATAGCCTCTCTCCCTCGGGGAGAACGAAT | + |
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Preference number: 1 (lower is better) Translates to: REAVKKPAAPSQGSH*SQKLYSLSPSGRTN Trigger: ATTCGTTCTCCCCGAGGGAGAGAGGCTATAGAGCTTCTGTGATCAATGACTTCCCTGTGAGGGAGCAGCTGGCTTCTTCACTGCTTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR CCA 90 bp | CAGTGCCCACAGAGGCCAGAAGATGACATTGGGTTCCCTGAGAACTaGAGTTACATGCTGTTAGCCACCAGGTGGGTGCCAGGAATCAAA | + |
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Preference number: 1 (lower is better) Translates to: QCPQRPEDDIGFPEN*SYMLLATRWVPGIK Trigger: TTTGATTCCTGGCACCCACCTGGTGGCTAACAGCATGTAACTCCAGTTCTCAGGGAACCCAATGTCATCTTCTGGCCTCTGTGGGCACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR CCA 90 bp | AGAACGAATACCCAGGAGCTTCCGAGTCCATCCACTGCGCCTCTCTaGATCTCAAGGCTCATCTTCTTCCCTTTCTCACTGAAGCTAGTC | + |
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Preference number: 1 (lower is better) Translates to: RTNTQELPSPSTAPL*ISRLIFFPFSLKLV Trigger: GACTAGCTTCAGTGAGAAAGGGAAGAAGATGAGCCTTGAGATCCAGAGAGGCGCAGTGGATGGACTCGGAAGCTCCTGGGTATTCGTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR TCA 90 bp | CACAAGATGCTCAAGTGCCCACTCCACAATCAACAAGGGAAGCAGTaGAGAAGCCAGCTGCTCCCTCACAGGGAAGTCATTGATCACAGA | + |
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Preference number: 1 (lower is better) Translates to: HKMLKCPLHNQQGKQ*RSQLLPHREVIDHR Trigger: TCTGTGATCAATGACTTCCCTGTGAGGGAGCAGCTGGCTTCTTCACTGCTTCCCTTGTTGATTGTGGAGTGGGCACTTGAGCATCTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR GCA 90 bp | GCACCATATGGCTGCTCTAACTCCCTCAGCACAGCAAACACAAGATaGTCAAGTGCCCACTCCACAATCAACAAGGGAAGCAGTGAAGAA | + |
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Preference number: 1 (lower is better) Translates to: APYGCSNSLSTANTR*SSAHSTINKGSSEE Trigger: TTCTTCACTGCTTCCCTTGTTGATTGTGGAGTGGGCACTTGAGCATCTTGTGTTTGCTGTGCTGAGGGAGTTAGAGCAGCCATATGGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR GCA 90 bp | GCAGTAACTTCAAGGAGACACATAGTTTCCACCCTGAACTCTGCCTaGTCTGGCCAGACACACAGTTACAATCAGGAACTTAAGAGCTCA | + |
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Preference number: 1 (lower is better) Translates to: AVTSRRHIVSTLNSA*SGQTHSYNQELKSS Trigger: TGAGCTCTTAAGTTCCTGATTGTAACTGTGTGTCTGGCCAGAGCAGGCAGAGTTCAGGGTGGAAACTATGTGTCTCCTTGAAGTTACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR GCA 90 bp | TCCTGCTCCACCCCCACATCCCGTTTTAATTCAGAAACAGGGTCTTaGTATATACCACTGTCTGGTATCAAACTCAATCCTCCTGCTTTA | + |
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Preference number: 1 (lower is better) Translates to: SCSTPTSRFNSETGS*YIPLSGIKLNPPAL Trigger: TAAAGCAGGAGGATTGAGTTTGATACCAGACAGTGGTATATAGCAAGACCCTGTTTCTGAATTAAAACGGGATGTGGGGGTGGAGCAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163049.2 |
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| 3UTR TCA 90 bp | ACAACTGGCTCCTTGCCACACAGACTCAGCATAGACACTCCAGGATaGAATGTCTCAGGAAGGCAGGTGGTTGTTTTTAATATTTTATTT | + |
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Preference number: 1 (lower is better) Translates to: TTGSLPHRLSIDTPG*NVSGRQVVVFNILF Trigger: AAATAAAATATTAAAAACAACCACCTGCCTTCCTGAGACATTTCATCCTGGAGTGTCTATGCTGAGTCTGTGTGGCAAGGAGCCAGTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR-3UTR GCA 90 bp | CCATGGCCAAAGGCTGCCCTAGAGGGTCCTGCACAGGGGAATGGGGATCAGACATCTATGTACCATGTGTaGAGTGCCCACAGAGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: PWPKAALEGPAQGNGDQTSMYHV*SAHRGQ Trigger: CTGGCCTCTGTGGGCACTGCACACATGGTACATAGA...TGTCTGATCCCCATTCCCCTGTGCAGGACCCTCTAGGGCAGCCTTTGGCCATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR CAA 90 bp | AGAGGGTCCTGCACAGGGGAATGGGGATCAGACACAGCTTTCTGCTaGTCGGAGGGAAGACTATGGGTCAGGGAGCGATTGGAGATACCA | + |
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Preference number: 2 (lower is better) Translates to: RGSCTGEWGSDTAFC*SEGRLWVRERLEIP Trigger: TGGTATCTCCAATCGCTCCCTGACCCATAGTCTTCCCTCCGACAAGCAGAAAGCTGTGTCTGATCCCCATTCCCCTGTGCAGGACCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR-3UTR GCA 90 bp | CCATGGCCAAAGGCTGCCCTAGAGGGTCCTGCACAGGGGAATGGGGATCAGACAGATTGGAGATACCAGTaGAGAAAGCACTACAGATGC | + |
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Preference number: 2 (lower is better) Translates to: PWPKAALEGPAQGNGDQTDWRYQ*RKHYRC Trigger: GCATCTGTAGTGCTTTCTGCACTGGTATCTCCAATC...TGTCTGATCCCCATTCCCCTGTGCAGGACCCTCTAGGGCAGCCTTTGGCCATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR-3UTR TCA 90 bp | ACGCCTGTATCCCAGCGCTCTGAAGGTGGAGGCAGGACTACCCTCAAGCTTGAGACTTTAAGCGCACACTaGCAAGTGTCTAAAGACACC | + |
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Preference number: 2 (lower is better) Translates to: TPVSQRSEGGGRTTLKLETLSAH*QVSKDT Trigger: GGTGTCTTTAGACACTTGTCAGTGTGCGCTTAAAGT...CTCAAGCTTGAGGGTAGTCCTGCCTCCACCTTCAGAGCGCTGGGATACAGGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR-3UTR GCA 90 bp | AGTGATGTAGTCATGGGTAGCAAGTTTCTAGGGACACCAGACACTGCTCAGGGCTCCGAGTCCATCCACTaGGCCTCTCTGGATCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: SDVVMGSKFLGTPDTAQGSESIH*ASLDLK Trigger: CTTGAGATCCAGAGAGGCGCAGTGGATGGACTCGGA...GCCCTGAGCAGTGTCTGGTGTCCCTAGAAACTTGCTACCCATGACTACATCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR-3UTR CCA 90 bp | CAGAGAGACTTAACCATCAAGCCCTTCAGCAGGGGATGGTGGCACACGCCTGTAGATCTTTGGGTGTCATaGGCATTTTCCTGGCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: QRDLTIKPFSRGWWHTPVDLWVS*AFSWLP Trigger: AGGCAGCCAGGAAAATGCCCATGACACCCAAAGATC...TACAGGCGTGTGCCACCATCCCCTGCTGAAGGGCTTGATGGTTAAGTCTCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR-3UTR TCA 90 bp | GATATGATTAGCTGTCCTTGCTCCAGCACTGTCCCATGGCAGGAACCGTTACAACAACAAGGGAAGCAGTaGAGAAGCCAGCTGCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: DMISCPCSSTVPWQEPLQQQGKQ*RSQLLP Trigger: AGGGAGCAGCTGGCTTCTTCACTGCTTCCCTTGTTG...TTGTAACGGTTCCTGCCATGGGACAGTGCTGGAGCAAGGACAGCTAATCATATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR-3UTR GCA 90 bp | TTCCACCCTGAACTCTGCCTGCTCTGGCCAGACACACAGTTACAATCAGGAACTAGTGAAGAAGCCAGCTaGTCCCTCACAGGGAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: FHPELCLLWPDTQLQSGTSEEAS*SLTGKS Trigger: TGACTTCCCTGTGAGGGAGCAGCTGGCTTCTTCACT...AGTTCCTGATTGTAACTGTGTGTCTGGCCAGAGCAGGCAGAGTTCAGGGTGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR-3UTR GCA 90 bp | AGTGATGTAGTCATGGGTAGCAAGTTTCTAGGGACACCAGACACTGCTCAGGGCCCTGCACCATATGGCTaGTCTAACTCCCTCAGCACA | + |
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Preference number: 2 (lower is better) Translates to: SDVVMGSKFLGTPDTAQGPAPYG*SNSLST Trigger: TGTGCTGAGGGAGTTAGAGCAGCCATATGGTGCAGG...GCCCTGAGCAGTGTCTGGTGTCCCTAGAAACTTGCTACCCATGACTACATCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR-3UTR TCA 90 bp | GAGCTGGATATGATTAGCTGTCCTTGCTCCAGCACTGTCCCATGGCAGGAACCGTCACAGGGAAGTCATTaGTCACAGAAGCTCTATAGC | + |
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Preference number: 2 (lower is better) Translates to: ELDMISCPCSSTVPWQEPSQGSH*SQKLYS Trigger: GCTATAGAGCTTCTGTGATCAATGACTTCCCTGTGA...CGGTTCCTGCCATGGGACAGTGCTGGAGCAAGGACAGCTAATCATATCCAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR-3UTR GCA 90 bp | GATATGATTAGCTGTCCTTGCTCCAGCACTGTCCCATGGCAGGAACCGTTACAAGTACCATGTGTGCAGTaGCCACAGAGGCCAGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: DMISCPCSSTVPWQEPLQVPCVQ*PQRPED Trigger: ATCTTCTGGCCTCTGTGGGCACTGCACACATGGTAC...TTGTAACGGTTCCTGCCATGGGACAGTGCTGGAGCAAGGACAGCTAATCATATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR-3UTR GCA 90 bp | AGTGATGTAGTCATGGGTAGCAAGTTTCTAGGGACACCAGACACTGCTCAGGGCACAGCAAACACAAGATaGTCAAGTGCCCACTCCACA | + |
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Preference number: 2 (lower is better) Translates to: SDVVMGSKFLGTPDTAQGTANTR*SSAHST Trigger: TGTGGAGTGGGCACTTGAGCATCTTGTGTTTGCTGT...GCCCTGAGCAGTGTCTGGTGTCCCTAGAAACTTGCTACCCATGACTACATCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR-3UTR TCA 90 bp | GATATGATTAGCTGTCCTTGCTCCAGCACTGTCCCATGGCAGGAACCGTTACAATATCTCAACAAGGACTaGGAAGCCTGGACATCAGGA | + |
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Preference number: 2 (lower is better) Translates to: DMISCPCSSTVPWQEPLQYLNKD*EAWTSG Trigger: TCCTGATGTCCAGGCTTCTCAGTCCTTGTTGAGATA...TTGTAACGGTTCCTGCCATGGGACAGTGCTGGAGCAAGGACAGCTAATCATATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR-3UTR TCA 90 bp | TTTGTCACTCCTGCTCCACCCCCACATCCCGTTTTAATTCAGAAACAGGGTCTTTCCTCCTGCTTTAATTaGCTGGGTGATGGCACTACA | + |
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Preference number: 2 (lower is better) Translates to: FVTPAPPPHPVLIQKQGLSSCFN*LGDGTT Trigger: TGTAGTGCCATCACCCAGTCAATTAAAGCAGGAGGA...AAGACCCTGTTTCTGAATTAAAACGGGATGTGGGGGTGGAGCAGGAGTGACAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163049.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTTTGTCACTCCTGCTCCACCCCCACATCCCGTTTTAATTCAGAAACAGGGTAAGTGCCATCATGCCTaGATGTCACTTTTGGATCAT | + |
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Preference number: 2 (lower is better) Translates to: WFVTPAPPPHPVLIQKQGKCHHA*MSLLDH Trigger: ATGATCCAAAAGTGACATTCAGGCATGATGGCACTT...ACCCTGTTTCTGAATTAAAACGGGATGTGGGGGTGGAGCAGGAGTGACAAACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000163049.2 |
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| 3UTR GCA 72 bp | ATGGTGGCAGCTGGGCAACAGGCAGAGGGCACAAAGTaGACCATGGCCAAAGGCTGCCCTAGAGGGTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: MVAAGQQAEGTK*TMAKGCPRGSC Trigger: GCAGGACCCTCTAGGGCAGCCTTTGGCCATGGTGCACTTTGTGCCCTCTGCCTGTTGCCCAGCTGCCACCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR GCA 72 bp | CAGGCAGAGGGCACAAAGTGCACCATGGCCAAAGGCTaGCCTAGAGGGTCCTGCACAGGGGAATGGGGATCA | + |
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Preference number: 3 (lower is better) Translates to: QAEGTKCTMAKG*PRGSCTGEWGS Trigger: TGATCCCCATTCCCCTGTGCAGGACCCTCTAGGGCAGCCTTTGGCCATGGTGCACTTTGTGCCCTCTGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR CCA 72 bp | GGCAGGAAAGCCCTGAGTCACAGCACAAGGTGTCGATaGTGGCAGCTGGGCAACAGGCAGAGGGCACAAAGT | + |
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Preference number: 3 (lower is better) Translates to: GRKALSHSTRCR*WQLGNRQRAQS Trigger: ACTTTGTGCCCTCTGCCTGTTGCCCAGCTGCCACCATCGACACCTTGTGCTGTGACTCAGGGCTTTCCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR GCA 72 bp | AAGTGCACCATGGCCAAAGGCTGCCCTAGAGGGTCCTaGACAGGGGAATGGGGATCAGACACAGCTTTCTGC | + |
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Preference number: 3 (lower is better) Translates to: KCTMAKGCPRGS*TGEWGSDTAFC Trigger: GCAGAAAGCTGTGTCTGATCCCCATTCCCCTGTGCAGGACCCTCTAGGGCAGCCTTTGGCCATGGTGCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR CCA 72 bp | AGGAAAGCCCTGAGTCACAGCACAAGGTGTCGATGGTaGCAGCTGGGCAACAGGCAGAGGGCACAAAGTGCA | + |
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Preference number: 3 (lower is better) Translates to: RKALSHSTRCRW*QLGNRQRAQSA Trigger: TGCACTTTGTGCCCTCTGCCTGTTGCCCAGCTGCCACCATCGACACCTTGTGCTGTGACTCAGGGCTTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR CCA 72 bp | CAGAGAGACTTAACCATCAAGCCCTTCAGCAGGGGATaGTGGCACACGCCTGTATCCCAGCGCTCTGAAGGT | + |
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Preference number: 3 (lower is better) Translates to: QRDLTIKPFSRG*WHTPVSQRSEG Trigger: ACCTTCAGAGCGCTGGGATACAGGCGTGTGCCACCATCCCCTGCTGAAGGGCTTGATGGTTAAGTCTCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR TCA 72 bp | GTGAAGAAGCCAGCTGCTCCCTCACAGGGAAGTCATTaGTCACAGAAGCTCTATAGCCTCTCTCCCTCGGGG | + |
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Preference number: 3 (lower is better) Translates to: VKKPAAPSQGSH*SQKLYSLSPSG Trigger: CCCCGAGGGAGAGAGGCTATAGAGCTTCTGTGATCAATGACTTCCCTGTGAGGGAGCAGCTGGCTTCTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR GCA 72 bp | GAGAACGAATACCCAGGAGCTTCCGAGTCCATCCACTaGGCCTCTCTGGATCTCAAGGCTCATCTTCTTCCC | + |
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Preference number: 3 (lower is better) Translates to: ENEYPGASESIH*ASLDLKAHLLP Trigger: GGGAAGAAGATGAGCCTTGAGATCCAGAGAGGCGCAGTGGATGGACTCGGAAGCTCCTGGGTATTCGTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR-3UTR CAA 90 bp | GAGCTGGATATGATTAGCTGTCCTTGCTCCAGCACTGTCCCATGGCAGGAACCGGGCCAGAAGATGACATaGGGTTCCCTGAGAACTGGA | + |
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Preference number: 3 (lower is better) Translates to: ELDMISCPCSSTVPWQEPGQKMT*GSLRTG Trigger: TCCAGTTCTCAGGGAACCCAATGTCATCTTCTGGCC...CGGTTCCTGCCATGGGACAGTGCTGGAGCAAGGACAGCTAATCATATCCAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR-3UTR CAA 90 bp | GAGCTGGATATGATTAGCTGTCCTTGCTCCAGCACTGTCCCATGGCAGGAACCGAATCTGGGGGCAGAATaGGATGCTACAACTGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: ELDMISCPCSSTVPWQEPNLGAE*DATTGS Trigger: GGAGCCAGTTGTAGCATCCAATTCTGCCCCCAGATT...CGGTTCCTGCCATGGGACAGTGCTGGAGCAAGGACAGCTAATCATATCCAGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR CCA 72 bp | CAGAGGCCAGAAGATGACATTGGGTTCCCTGAGAACTaGAGTTACATGCTGTTAGCCACCAGGTGGGTGCCA | + |
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Preference number: 3 (lower is better) Translates to: QRPEDDIGFPEN*SYMLLATRWVP Trigger: TGGCACCCACCTGGTGGCTAACAGCATGTAACTCCAGTTCTCAGGGAACCCAATGTCATCTTCTGGCCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR GCA 72 bp | TTGAGCCTTTCTCTGAGCACCCCTGCACCATATGGCTaGTCTAACTCCCTCAGCACAGCAAACACAAGATGC | + |
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Preference number: 3 (lower is better) Translates to: LSLSLSTPAPYG*SNSLSTANTRC Trigger: GCATCTTGTGTTTGCTGTGCTGAGGGAGTTAGAGCAGCCATATGGTGCAGGGGTGCTCAGAGAAAGGCTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR CCA 72 bp | CAAAGCACAGCTGGCATATGGGCTGATAACGATCTTTaGGTGTCATGGGCATTTTCCTGGCTGCCTTGGTGT | + |
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Preference number: 3 (lower is better) Translates to: QSTAGIWADNDL*VSWAFSWLPWC Trigger: ACACCAAGGCAGCCAGGAAAATGCCCATGACACCCAAAGATCGTTATCAGCCCATATGCCAGCTGTGCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR CCA 72 bp | GGCCCTCACTTGGACTCACAAAGCACAGCTGGCATATaGGCTGATAACGATCTTTGGGTGTCATGGGCATTT | + |
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Preference number: 3 (lower is better) Translates to: GPHLDSQSTAGI*ADNDLWVSWAF Trigger: AAATGCCCATGACACCCAAAGATCGTTATCAGCCCATATGCCAGCTGTGCTTTGTGAGTCCAAGTGAGGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR CCA 72 bp | AAGAGCTCACACCCAAAAAGGATTGCCTCAGACATCTaGCCCTCACTTGGACTCACAAAGCACAGCTGGCAT | + |
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Preference number: 3 (lower is better) Translates to: KSSHPKRIASDI*PSLGLTKHSWH Trigger: ATGCCAGCTGTGCTTTGTGAGTCCAAGTGAGGGCCAGATGTCTGAGGCAATCCTTTTTGGGTGTGAGCTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR CCA 72 bp | GATATGATTAGCTGTCCTTGCTCCAGCACTGTCCCATaGCAGGAACCGTTACAACCACTGTCTACCCTAATG | + |
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Preference number: 3 (lower is better) Translates to: DMISCPCSSTVP*QEPLQPLSTLM Trigger: CATTAGGGTAGACAGTGGTTGTAACGGTTCCTGCCATGGGACAGTGCTGGAGCAAGGACAGCTAATCATATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR GCA 72 bp | GAAGACTATGGGTCAGGGAGCGATTGGAGATACCAGTaGAGAAAGCACTACAGATGCCGAGAGTTAGTTAAC | + |
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Preference number: 3 (lower is better) Translates to: EDYGSGSDWRYQ*RKHYRCRELVN Trigger: GTTAACTAACTCTCGGCATCTGTAGTGCTTTCTGCACTGGTATCTCCAATCGCTCCCTGACCCATAGTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| 3UTR-3UTR CAA 90 bp | AGTTACAATCAGGAACTTAAGAGCTCACACCCAAAAAGGATTGCCTCAGACATCATTTTCCTGGCTGCCTaGGTGTGTCTAAGTGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SYNQELKSSHPKRIASDIIFLAA*VCLSGE Trigger: CTCACCACTTAGACACACCAAGGCAGCCAGGAAAAT...GATGTCTGAGGCAATCCTTTTTGGGTGTGAGCTCTTAAGTTCCTGATTGTAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| 3UTR TCA 72 bp | CTCACTGAAGCTAGTCCAAGAACTTTAAGCGCACACTaGCAAGTGTCTAAAGACACCAACACTGACCCTATC | + |
|
Preference number: 3 (lower is better) Translates to: LTEASPRTLSAH*QVSKDTNTDPI Trigger: GATAGGGTCAGTGTTGGTGTCTTTAGACACTTGTCAGTGTGCGCTTAAAGTTCTTGGACTAGCTTCAGTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| 3UTR CCA 72 bp | TCTGGTATCAAACTCAATCCTCCTGCTTTAATTGACTaGGTGATGGCACTACAGGTAAGTGCCATCATGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SGIKLNPPALID*VMALQVSAIMP Trigger: AGGCATGATGGCACTTACCTGTAGTGCCATCACCCAGTCAATTAAAGCAGGAGGATTGAGTTTGATACCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163049.2 |
||
| 3UTR TCA 72 bp | ACTGTCTGGTATCAAACTCAATCCTCCTGCTTTAATTaGCTGGGTGATGGCACTACAGGTAAGTGCCATCAT | + |
|
Preference number: 3 (lower is better) Translates to: TVWYQTQSSCFN*LGDGTTGKCHH Trigger: ATGATGGCACTTACCTGTAGTGCCATCACCCAGTCAATTAAAGCAGGAGGATTGAGTTTGATACCAGACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163049.2 |
||
| 3UTR CCA 72 bp | ATGCAATTGTATAAGCATATAATCTGGGGGCAGAATTaGATGCTACAACTGGCTCCTTGCCACACAGACTCA | + |
|
Preference number: 3 (lower is better) Translates to: MQLYKHIIWGQN*MLQLAPCHTDS Trigger: TGAGTCTGTGTGGCAAGGAGCCAGTTGTAGCATCCAATTCTGCCCCCAGATTATATGCTTATACAATTGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| 3UTR GCA 72 bp | ACCCCCACATCCCGTTTTAATTCAGAAACAGGGTCTTaGTATATACCACTGTCTGGTATCAAACTCAATCCT | + |
|
Preference number: 3 (lower is better) Translates to: TPTSRFNSETGS*YIPLSGIKLNP Trigger: AGGATTGAGTTTGATACCAGACAGTGGTATATAGCAAGACCCTGTTTCTGAATTAAAACGGGATGTGGGGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163049.2 |
||
| 3UTR TCA 72 bp | TCCACAGGAAAAGCCATCAGCATTCCGAATTATTCCTaGCAGGCTCCAACTTTCATTTTAAGCATCCTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: STGKAISIPNYS*QAPTFILSILK Trigger: CTTAAGGATGCTTAAAATGAAAGTTGGAGCCTGTCAGGAATAATTCGGAATGCTGATGGCTTTTCCTGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR GCA 90 bp | TCAAACCCAGGTCCTCTGAGAGAGCAGCCGCTGTTCTTTACTACGCCCAGGGTCCCGCCATCAGGGAGCTaGACTGACCGCAGGTACCGC | + |
|
Preference number: 4 (lower is better) Translates to: SNPGPLREQPLFFTTPRVPPSGS*TDRRYR Trigger: GCGGTACCTGCGGTCAGTGCAGCTCCCTGATGGCGG...GACCCTGGGCGTAGTAAAGAACAGCGGCTGCTCTCTCAGAGGACCTGGGTTTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR CCA 90 bp | CCATGGCCAAAGGCTGCCCTAGAGGGTCCTGCACAGGGGAATGGGGATCAGACAAGTGGAGGGGTGCGCTaGTACCCATTCAGGAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: PWPKAALEGPAQGNGDQTSGGVR*YPFRKQ Trigger: CTGTTTCCTGAATGGGTACCAGCGCACCCCTCCACT...TGTCTGATCCCCATTCCCCTGTGCAGGACCCTCTAGGGCAGCCTTTGGCCATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR CCA 90 bp | CCATGGCCAAAGGCTGCCCTAGAGGGTCCTGCACAGGGGAATGGGGATCAGACAGTTGTTCCTCTGCGCTaGCCAATCGATGCTGGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: PWPKAALEGPAQGNGDQTVVPLR*PIDAGV Trigger: TACGCCAGCATCGATTGGCCAGCGCAGAGGAACAAC...TGTCTGATCCCCATTCCCCTGTGCAGGACCCTCTAGGGCAGCCTTTGGCCATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR TCA 90 bp | TTCCACCCTGAACTCTGCCTGCTCTGGCCAGACACACAGTTACAATCAGGAACTAGCCGCAGGAACTCGTaGGCCTTCTGCAGGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FHPELCLLWPDTQLQSGTSRRNS*AFCRQG Trigger: GCCCTGCCTGCAGAAGGCTCACGAGTTCCTGCGGCT...AGTTCCTGATTGTAACTGTGTGTCTGGCCAGAGCAGGCAGAGTTCAGGGTGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR GCA 90 bp | CATATGGCTGCTCTAACTCCCTCAGCACAGCAAACACAAGATGCTCAAGTGCCCGCCTCTAGCCCGGTCTaGTCTCGACCAGGGTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HMAALTPSAQQTQDAQVPASSPV*SRPGSS Trigger: GGACGACCCTGGTCGAGAGCAGACCGGGCTAGAGGC...GGGCACTTGAGCATCTTGTGTTTGCTGTGCTGAGGGAGTTAGAGCAGCCATATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR GCA 90 bp | TCAAACCCAGGTCCTCTGAGAGAGCAGCCGCTGTTCTTTACTACGCCCAGGGTCCAGAGAGTGGAGGGGTaGGCTGGTACCCATTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SNPGPLREQPLFFTTPRVQRVEG*AGTHSG Trigger: TCCTGAATGGGTACCAGCGCACCCCTCCACTCTCTG...GACCCTGGGCGTAGTAAAGAACAGCGGCTGCTCTCTCAGAGGACCTGGGTTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR TCA 90 bp | CCATGGCCAAAGGCTGCCCTAGAGGGTCCTGCACAGGGGAATGGGGATCAGACACAATACCCAGGATTCTaGGAGCCACATAGTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PWPKAALEGPAQGNGDQTQYPGF*EPHSSG Trigger: CCCTGAACTATGTGGCTCTCAGAATCCTGGGTATTG...TGTCTGATCCCCATTCCCCTGTGCAGGACCCTCTAGGGCAGCCTTTGGCCATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR TCA 90 bp | CAGAGAGACTTAACCATCAAGCCCTTCAGCAGGGGATGGTGGCACACGCCTGTACAGAAGTCCAGGCCTTaGTTGAGGGTCTCCCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: QRDLTIKPFSRGWWHTPVQKSRP*LRVSLT Trigger: GGTCAGGGAGACCCTCAATCAAGGCCTGGACTTCTG...TACAGGCGTGTGCCACCATCCCCTGCTGAAGGGCTTGATGGTTAAGTCTCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR TCA 90 bp | GAGCTGGATATGATTAGCTGTCCTTGCTCCAGCACTGTCCCATGGCAGGAACCGACCAGGTGCCGTAGGTaGAACAAACACCCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ELDMISCPCSSTVPWQEPTRCRR*NKHPRS Trigger: GCTCCTGGGGTGTTTGTTTCACCTACGGCACCTGGT...CGGTTCCTGCCATGGGACAGTGCTGGAGCAAGGACAGCTAATCATATCCAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR TCA 90 bp | CCATGGCCAAAGGCTGCCCTAGAGGGTCCTGCACAGGGGAATGGGGATCAGACATGGCACAGGACTTGTTaGAGACCCCAGAGATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PWPKAALEGPAQGNGDQTWHRTC*RPQRCS Trigger: AGAACATCTCTGGGGTCTTCAACAAGTCCTGTGCCA...TGTCTGATCCCCATTCCCCTGTGCAGGACCCTCTAGGGCAGCCTTTGGCCATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR CCA 90 bp | TCAAACCCAGGTCCTCTGAGAGAGCAGCCGCTGTTCTTTACTACGCCCAGGGTCGGTAATCAGGAGACCTaGCAAGAGGAAGAGCGGACC | + |
|
Preference number: 4 (lower is better) Translates to: SNPGPLREQPLFFTTPRVGNQET*QEEERT Trigger: GGTCCGCTCTTCCTCTTGCCAGGTCTCCTGATTACC...GACCCTGGGCGTAGTAAAGAACAGCGGCTGCTCTCTCAGAGGACCTGGGTTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR CCA 90 bp | ACGCCTGTATCCCAGCGCTCTGAAGGTGGAGGCAGGACTACCCTCAAGCTTGAGCCCACTTCCGCAGGCTaGTGCTATGGAAACGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TPVSQRSEGGGRTTLKLEPTSAG*CYGNVH Trigger: ATGAACGTTTCCATAGCACCAGCCTGCGGAAGTGGG...CTCAAGCTTGAGGGTAGTCCTGCCTCCACCTTCAGAGCGCTGGGATACAGGCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR CCA 90 bp | GCACCCCTGCACCATATGGCTGCTCTAACTCCCTCAGCACAGCAAACACAAGATTGTCAGGATACAGGTTaGAGAAGCGGCCCAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: APLHHMAALTPSAQQTQDCQDTG*RSGPGP Trigger: GGGCCCTGGGCCGCTTCTCCAACCTGTATCCTGACA...ATCTTGTGTTTGCTGTGCTGAGGGAGTTAGAGCAGCCATATGGTGCAGGGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR TCA 90 bp | TTCCACCCTGAACTCTGCCTGCTCTGGCCAGACACACAGTTACAATCAGGAACTATCAGGGAGCTGCACTaGCCGCAGGTACCGCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: FHPELCLLWPDTQLQSGTIRELH*PQVPHH Trigger: ATGGTGCGGTACCTGCGGTCAGTGCAGCTCCCTGAT...AGTTCCTGATTGTAACTGTGTGTCTGGCCAGAGCAGGCAGAGTTCAGGGTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR TCA 90 bp | ATCCACTGCGCCTCTCTGGATCTCAAGGCTCATCTTCTTCCCTTTCTCACTGAATCCTGGCGGAGGCTCTaGACCAGTGGGTCCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IHCASLDLKAHLLPFLTESWRRL*TSGSSE Trigger: CTCAGAGGACCCACTGGTTCAGAGCCTCCGCCAGGA...TTCAGTGAGAAAGGGAAGAAGATGAGCCTTGAGATCCAGAGAGGCGCAGTGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR CCA 90 bp | GCTCAAGTGCCCACTCCACAATCAACAAGGGAAGCAGTGAAGAAGCCAGCTGCTCAGCAGCCAGCTGTGTaGCGTGTACATCTCATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: AQVPTPQSTREAVKKPAAQQPAV*RVHLIG Trigger: CCCGATGAGATGTACACGCCACACAGCTGGCTGCTG...AGCAGCTGGCTTCTTCACTGCTTCCCTTGTTGATTGTGGAGTGGGCACTTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| 3UTR CAA 72 bp | TGCACAGGGGAATGGGGATCAGACACAGCTTTCTGCTaGTCGGAGGGAAGACTATGGGTCAGGGAGCGATTG | + |
|
Preference number: 4 (lower is better) Translates to: CTGEWGSDTAFC*SEGRLWVRERL Trigger: CAATCGCTCCCTGACCCATAGTCTTCCCTCCGACAAGCAGAAAGCTGTGTCTGATCCCCATTCCCCTGTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR TCA 90 bp | GAGCTGGATATGATTAGCTGTCCTTGCTCCAGCACTGTCCCATGGCAGGAACCGAGTGTCCCAGATCTGTaGTCCATTGGTGCCCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ELDMISCPCSSTVPWQEPSVPDL*SIGALH Trigger: ATGCAGGGCACCAATGGATCACAGATCTGGGACACT...CGGTTCCTGCCATGGGACAGTGCTGGAGCAAGGACAGCTAATCATATCCAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR TCA 90 bp | TTCCACCCTGAACTCTGCCTGCTCTGGCCAGACACACAGTTACAATCAGGAACTCTGATCCCTCTCTCCTaGGCAGTGATGTCGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: FHPELCLLWPDTQLQSGTLIPLS*AVMSGC Trigger: GCATCCCGACATCACTGCTCAGGAGAGAGGGATCAG...AGTTCCTGATTGTAACTGTGTGTCTGGCCAGAGCAGGCAGAGTTCAGGGTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR TCA 90 bp | GCTCAAGTGCCCACTCCACAATCAACAAGGGAAGCAGTGAAGAAGCCAGCTGCTCCAGAGATGTTCTCCTaGGGCCAGTCTCCATTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: AQVPTPQSTREAVKKPAAPEMFS*GQSPLG Trigger: ACCCAATGGAGACTGGCCTCAGGAGAACATCTCTGG...AGCAGCTGGCTTCTTCACTGCTTCCCTTGTTGATTGTGGAGTGGGCACTTGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR GCA 90 bp | TTCCACCCTGAACTCTGCCTGCTCTGGCCAGACACACAGTTACAATCAGGAACTCTCCCTGACCTCTGCTaGCCTGTAGTCTGGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FHPELCLLWPDTQLQSGTLPDLC*PVVWEV Trigger: CACTTCCCAGACTACAGGGCAGCAGAGGTCAGGGAG...AGTTCCTGATTGTAACTGTGTGTCTGGCCAGAGCAGGCAGAGTTCAGGGTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR CCA 90 bp | ATCCACTGCGCCTCTCTGGATCTCAAGGCTCATCTTCTTCCCTTTCTCACTGAAAGTGACACCAGAGAGTaGAGGGGTGCGCTGGTACCC | + |
|
Preference number: 4 (lower is better) Translates to: IHCASLDLKAHLLPFLTESDTRE*RGALVP Trigger: GGGTACCAGCGCACCCCTCCACTCTCTGGTGTCACT...TTCAGTGAGAAAGGGAAGAAGATGAGCCTTGAGATCCAGAGAGGCGCAGTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR CCA 90 bp | GCACCCCTGCACCATATGGCTGCTCTAACTCCCTCAGCACAGCAAACACAAGATTGTTCATACAGCATCTaGACGGCCCACTTCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: APLHHMAALTPSAQQTQDCSYSI*TAHFRR Trigger: CCTGCGGAAGTGGGCCGTCCAGATGCTGTATGAACA...ATCTTGTGTTTGCTGTGCTGAGGGAGTTAGAGCAGCCATATGGTGCAGGGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR TCA 90 bp | AGCAAGTTTCTAGGGACACCAGACACTGCTCAGGGCACAATGAGTAAGGGACCTGTGATGGACGGACACTaGTTCTGCAGGAGCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SKFLGTPDTAQGTMSKGPVMDGH*FCRSST Trigger: TGTGCTGCTCCTGCAGAATCAGTGTCCGTCCATCAC...AGGTCCCTTACTCATTGTGCCCTGAGCAGTGTCTGGTGTCCCTAGAAACTTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR TCA 90 bp | ATCCACTGCGCCTCTCTGGATCTCAAGGCTCATCTTCTTCCCTTTCTCACTGAAGTCTCCAAAGACCTCTaGGGGGTTCAGCAGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IHCASLDLKAHLLPFLTEVSKDL*GVQQLQ Trigger: CTGGAGCTGCTGAACCCCTCAGAGGTCTTTGGAGAC...TTCAGTGAGAAAGGGAAGAAGATGAGCCTTGAGATCCAGAGAGGCGCAGTGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR TCA 90 bp | TTCCACCCTGAACTCTGCCTGCTCTGGCCAGACACACAGTTACAATCAGGAACTCCGCCGCTGTTCACATaGTTCAAAGTCCTCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FHPELCLLWPDTQLQSGTPPLFT*FKVLSP Trigger: TGGGGAGAGGACTTTGAATCATGTGAACAGCGGCGG...AGTTCCTGATTGTAACTGTGTGTCTGGCCAGAGCAGGCAGAGTTCAGGGTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR TCA 90 bp | TTCCACCCTGAACTCTGCCTGCTCTGGCCAGACACACAGTTACAATCAGGAACTTCCCTAGCAGACATCTaGTCCCTCTCTCCTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FHPELCLLWPDTQLQSGTSLADI*SLSPEQ Trigger: CTGCTCAGGAGAGAGGGATCAGATGTCTGCTAGGGA...AGTTCCTGATTGTAACTGTGTGTCTGGCCAGAGCAGGCAGAGTTCAGGGTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR GCA 90 bp | AGCAAGTTTCTAGGGACACCAGACACTGCTCAGGGCACAATGAGTAAGGGACCTGACACGTTGTTCCTCTaGGCTGGCCAATCGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKFLGTPDTAQGTMSKGPDTLFL*AGQSML Trigger: CAGCATCGATTGGCCAGCGCAGAGGAACAACGTGTC...AGGTCCCTTACTCATTGTGCCCTGAGCAGTGTCTGGTGTCCCTAGAAACTTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR GCA 90 bp | ATCCACTGCGCCTCTCTGGATCTCAAGGCTCATCTTCTTCCCTTTCTCACTGAAGGTCTCCCTGACCTCTaGTGCCCTGTAGTCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IHCASLDLKAHLLPFLTEGLPDL*CPVVWE Trigger: TTCCCAGACTACAGGGCAGCAGAGGTCAGGGAGACC...TTCAGTGAGAAAGGGAAGAAGATGAGCCTTGAGATCCAGAGAGGCGCAGTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR GCA 90 bp | AGTGATGTAGTCATGGGTAGCAAGTTTCTAGGGACACCAGACACTGCTCAGGGCGGCCTGAGCTACTTCTaGACAAGCAGCCCCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SDVVMGSKFLGTPDTAQGGLSYF*TSSPIL Trigger: CAAGATGGGGCTGCTTGTGCAGAAGTAGCTCAGGCC...GCCCTGAGCAGTGTCTGGTGTCCCTAGAAACTTGCTACCCATGACTACATCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR GCA 90 bp | GATATGATTAGCTGTCCTTGCTCCAGCACTGTCCCATGGCAGGAACCGTTACAACCTCCATCCGCCATCTaGTGGGACAGGAGGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: DMISCPCSSTVPWQEPLQPPSAI*WDRRKL Trigger: CAACTTCCTCCTGTCCCAGCAGATGGCGGATGGAGG...TTGTAACGGTTCCTGCCATGGGACAGTGCTGGAGCAAGGACAGCTAATCATATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR CCA 90 bp | GAGCTGGATATGATTAGCTGTCCTTGCTCCAGCACTGTCCCATGGCAGGAACCGCAGTCCCAAACACTGTaGACTTGTCCTCGATGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ELDMISCPCSSTVPWQEPQSQTL*TCPRCA Trigger: TGCACATCGAGGACAAGTCCACAGTGTTTGGGACTG...CGGTTCCTGCCATGGGACAGTGCTGGAGCAAGGACAGCTAATCATATCCAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR CCA 90 bp | TTCCACCCTGAACTCTGCCTGCTCTGGCCAGACACACAGTTACAATCAGGAACTCGTAGCAGTAACTCATaGGCAGATAGACCTGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FHPELCLLWPDTQLQSGTRSSNS*ADRPAG Trigger: GCCGGCAGGTCTATCTGCCCATGAGTTACTGCTACG...AGTTCCTGATTGTAACTGTGTGTCTGGCCAGAGCAGGCAGAGTTCAGGGTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR CCA 90 bp | TCAAACCCAGGTCCTCTGAGAGAGCAGCCGCTGTTCTTTACTACGCCCAGGGTCTCTGGGAAGTGTTCATaGAAATGCTTCAGTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SNPGPLREQPLFFTTPRVSGKCS*KCFSAC Trigger: GCAGGCACTGAAGCATTTCCATGAACACTTCCCAGA...GACCCTGGGCGTAGTAAAGAACAGCGGCTGCTCTCTCAGAGGACCTGGGTTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR CCA 90 bp | AGTGATGTAGTCATGGGTAGCAAGTTTCTAGGGACACCAGACACTGCTCAGGGCGGCCCAGGGCCCAGATaGGGAAGATGTTTCTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SDVVMGSKFLGTPDTAQGGPGPR*GRCFCN Trigger: GTTACAGAAACATCTTCCCCATCTGGGCCCTGGGCC...GCCCTGAGCAGTGTCTGGTGTCCCTAGAAACTTGCTACCCATGACTACATCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| 3UTR CAA 72 bp | GTGATCTGGTTCGTAACCGGGAATTCCAAGGGATGGTaGCTGCTGCTAGGAGCAGATCTAGCTGAGTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: VIWFVTGNSKGW*LLLGADLAEFT Trigger: GGTGAACTCAGCTAGATCTGCTCCTAGCAGCAGCAACCATCCCTTGGAATTCCCGGTTACGAACCAGATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR GCA 90 bp | TTCCACCCTGAACTCTGCCTGCTCTGGCCAGACACACAGTTACAATCAGGAACTCCCTCATGGGCTGTTTaGGCTTTTGGTAAGTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: FHPELCLLWPDTQLQSGTPSWAV*AFGKSV Trigger: CACGGACTTACCAAAAGCGCAAACAGCCCATGAGGG...AGTTCCTGATTGTAACTGTGTGTCTGGCCAGAGCAGGCAGAGTTCAGGGTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR TCA 90 bp | ACGCCTGTATCCCAGCGCTCTGAAGGTGGAGGCAGGACTACCCTCAAGCTTGAGCTTTTGGTAAGTCCGTaGAATAACTTCTTGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPVSQRSEGGGRTTLKLELLVSP*NNFLCP Trigger: TGGACACAAGAAGTTATTTCACGGACTTACCAAAAG...CTCAAGCTTGAGGGTAGTCCTGCCTCCACCTTCAGAGCGCTGGGATACAGGCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR GCA 90 bp | AGCAAGTTTCTAGGGACACCAGACACTGCTCAGGGCACAATGAGTAAGGGACCTTGCCCTGCATTTTCATaGCATCAAGGCCCAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SKFLGTPDTAQGTMSKGPCPAFS*HQGPAK Trigger: TTTGGCTGGGCCTTGATGGCATGAAAATGCAGGGCA...AGGTCCCTTACTCATTGTGCCCTGAGCAGTGTCTGGTGTCCCTAGAAACTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR GCA 90 bp | TTCCACCCTGAACTCTGCCTGCTCTGGCCAGACACACAGTTACAATCAGGAACTATGGAAATGCTTCAGTaGCTGCATCACAGCGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FHPELCLLWPDTQLQSGTMEMLQ*LHHSGG Trigger: ACCTCCGCTGTGATGCAGGCACTGAAGCATTTCCAT...AGTTCCTGATTGTAACTGTGTGTCTGGCCAGAGCAGGCAGAGTTCAGGGTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR CCA 90 bp | GCACCCCTGCACCATATGGCTGCTCTAACTCCCTCAGCACAGCAAACACAAGATCCTCAGCCTGCAGCTTaGCATAAAAGGTTACTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: APLHHMAALTPSAQQTQDPQPAA*HKRLLH Trigger: ATGGAGTAACCTTTTATGCCAAGCTGCAGGCTGAGG...ATCTTGTGTTTGCTGTGCTGAGGGAGTTAGAGCAGCCATATGGTGCAGGGGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR CCA 90 bp | ATCCACTGCGCCTCTCTGGATCTCAAGGCTCATCTTCTTCCCTTTCTCACTGAAAGGCACTTAGCCGAGTaGCGTAGCAGTAACTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: IHCASLDLKAHLLPFLTERHLAE*RSSNSW Trigger: CCATGAGTTACTGCTACGCCACTCGGCTAAGTGCCT...TTCAGTGAGAAAGGGAAGAAGATGAGCCTTGAGATCCAGAGAGGCGCAGTGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR CCA 90 bp | GAGCTGGATATGATTAGCTGTCCTTGCTCCAGCACTGTCCCATGGCAGGAACCGGCCTCTAACAGTGCTTaGATAGCAAATGAAGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ELDMISCPCSSTVPWQEPASNSA*IANEVS Trigger: GGACACTTCATTTGCTATCCAAGCACTGTTAGAGGC...CGGTTCCTGCCATGGGACAGTGCTGGAGCAAGGACAGCTAATCATATCCAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| 3UTR CAA 72 bp | ACCCAAAAAGGATTGCCTCAGACATCTGGCCCTCACTaGGACTCACAAAGCACAGCTGGCATATGGGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TQKGLPQTSGPH*DSQSTAGIWAD Trigger: ATCAGCCCATATGCCAGCTGTGCTTTGTGAGTCCAAGTGAGGGCCAGATGTCTGAGGCAATCCTTTTTGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR TCA 90 bp | GCTCAAGTGCCCACTCCACAATCAACAAGGGAAGCAGTGAAGAAGCCAGCTGCTGAGATGTGTGATATGTaGCAGGTAATCAGGAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: AQVPTPQSTREAVKKPAAEMCDM*QVIRRP Trigger: AGGTCTCCTGATTACCTGTCACATATCACACATCTC...AGCAGCTGGCTTCTTCACTGCTTCCCTTGTTGATTGTGGAGTGGGCACTTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR CCA 90 bp | GCTCAAGTGCCCACTCCACAATCAACAAGGGAAGCAGTGAAGAAGCCAGCTGCTAGATCTGTGATCCATTaGTGCCCTGCATTTTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: AQVPTPQSTREAVKKPAARSVIH*CPAFSC Trigger: GCATGAAAATGCAGGGCACCAATGGATCACAGATCT...AGCAGCTGGCTTCTTCACTGCTTCCCTTGTTGATTGTGGAGTGGGCACTTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR TCA 90 bp | GATATGATTAGCTGTCCTTGCTCCAGCACTGTCCCATGGCAGGAACCGTTACAACAGGGAATAGGGTGTTaGGTCCTTCCCAGCTATAAA | + |
|
Preference number: 4 (lower is better) Translates to: DMISCPCSSTVPWQEPLQQGIGC*VLPSYK Trigger: TTTATAGCTGGGAAGGACTCAACACCCTATTCCCTG...TTGTAACGGTTCCTGCCATGGGACAGTGCTGGAGCAAGGACAGCTAATCATATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR TCA 90 bp | AGTGATGTAGTCATGGGTAGCAAGTTTCTAGGGACACCAGACACTGCTCAGGGCACGTGTAGTCAATCATaGTGTCTCCAAAGACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SDVVMGSKFLGTPDTAQGTCSQS*CLQRPL Trigger: CAGAGGTCTTTGGAGACATCATGATTGACTACACGT...GCCCTGAGCAGTGTCTGGTGTCCCTAGAAACTTGCTACCCATGACTACATCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR GCA 90 bp | ATCCACTGCGCCTCTCTGGATCTCAAGGCTCATCTTCTTCCCTTTCTCACTGAAGATCCATTGGTGCCCTaGATTTTCATGCCATCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IHCASLDLKAHLLPFLTEDPLVP*IFMPSR Trigger: CCTTGATGGCATGAAAATGCAGGGCACCAATGGATC...TTCAGTGAGAAAGGGAAGAAGATGAGCCTTGAGATCCAGAGAGGCGCAGTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR GCA 90 bp | ATCCACTGCGCCTCTCTGGATCTCAAGGCTCATCTTCTTCCCTTTCTCACTGAAAGGAGAAACCACCCTTaGGCATATGGCGATAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: IHCASLDLKAHLLPFLTERRNHP*AYGDST Trigger: AGTACTATCGCCATATGCGCAAGGGTGGTTTCTCCT...TTCAGTGAGAAAGGGAAGAAGATGAGCCTTGAGATCCAGAGAGGCGCAGTGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR CCA 90 bp | ATCCACTGCGCCTCTCTGGATCTCAAGGCTCATCTTCTTCCCTTTCTCACTGAATGCTGCCCTGTAGTCTaGGAAGTGTTCATGGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: IHCASLDLKAHLLPFLTECCPVV*EVFMEM Trigger: CATTTCCATGAACACTTCCCAGACTACAGGGCAGCA...TTCAGTGAGAAAGGGAAGAAGATGAGCCTTGAGATCCAGAGAGGCGCAGTGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR GCA 90 bp | CATATGGCTGCTCTAACTCCCTCAGCACAGCAAACACAAGATGCTCAAGTGCCCAAGTGTTCATGGAAATaGTTCAGTGCCTGCATCACA | + |
|
Preference number: 4 (lower is better) Translates to: HMAALTPSAQQTQDAQVPKCSWK*FSACIT Trigger: TGTGATGCAGGCACTGAAGCATTTCCATGAACACTT...GGGCACTTGAGCATCTTGTGTTTGCTGTGCTGAGGGAGTTAGAGCAGCCATATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR GCA 90 bp | AGTGATGTAGTCATGGGTAGCAAGTTTCTAGGGACACCAGACACTGCTCAGGGCGAAACAGTCATCAGCTaGAATGTGTTCATACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SDVVMGSKFLGTPDTAQGETVIS*NVFIQH Trigger: ATGCTGTATGAACACATTGCAGCTGATGACTGTTTC...GCCCTGAGCAGTGTCTGGTGTCCCTAGAAACTTGCTACCCATGACTACATCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR GCA 90 bp | TTGGTTTCATGGTTTGTCACTCCTGCTCCACCCCCACATCCCGTTTTAATTCAGTTACCTGCATTTTCATaGCATCAAGGCCCAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LVSWFVTPAPPPHPVLIQLPAFS*HQGPAK Trigger: TTTGGCTGGGCCTTGATGGCATGAAAATGCAGGTAA...CTGAATTAAAACGGGATGTGGGGGTGGAGCAGGAGTGACAAACCATGAAACCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000163049.2 |
||
| CDS-3UTR GCA 90 bp | AGTTACAATCAGGAACTTAAGAGCTCACACCCAAAAAGGATTGCCTCAGACATCTCTGTGATCCATTGGTaGCCTGCATTTTCATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SYNQELKSSHPKRIASDISVIHW*PAFSCH Trigger: ATGGCATGAAAATGCAGGGCACCAATGGATCACAGA...GATGTCTGAGGCAATCCTTTTTGGGTGTGAGCTCTTAAGTTCCTGATTGTAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR GCA 90 bp | CATCCCGTTTTAATTCAGAAACAGGGTCTTGCTATATACCACTGTCTGGTATCAGCAGCATCCGTTCTGTaGCCTTACCTGCATTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HPVLIQKQGLAIYHCLVSAASVL*PYLHFH Trigger: ATGAAAATGCAGGTAAGGGCACAGAACGGATGCTGC...TGATACCAGACAGTGGTATATAGCAAGACCCTGTTTCTGAATTAAAACGGGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163049.2 |
||
| CDS TCA 90 bp | AAGTCCATCTCTGCCGACCCAACTCATTCTGGAGCCGCCAGCGGGTaGGATCGGTGGCGGGCTCAGTTTTATAGGGTCCCCCACGACGCC | + |
|
Preference number: 5 (lower is better) Translates to: KSISADPTHSGAASG*DRWRAQFYRVPHDA Trigger: GGCGTCGTGGGGGACCCTATAAAACTGAGCCCGCCACCGATCTCACCCGCTGGCGGCTCCAGAATGAGTTGGGTCGGCAGAGATGGACTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS TCA 90 bp | CTTGTCCTCGATGTGCAAGCCCCAGCCGCCATCAGGGAGCTGCACTaGCCGCAGGTACCGCACCATCTCCTCTCTGTATCCAGCTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LVLDVQAPAAIRELH*PQVPHHLLSVSSWQ Trigger: CTGCCAGCTGGATACAGAGAGGAGATGGTGCGGTACCTGCGGTCAGTGCAGCTCCCTGATGGCGGCTGGGGCTTGCACATCGAGGACAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS TCA 90 bp | GCCCCATGCAAGCGAACGCTTCCAAGCCAAACCAGGTGCCGTAGGTaGAACAAACACCCCAGGAGCCCTCCCAGGAGCCATCGGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: APCKRTLPSQTRCRR*NKHPRSPPRSHRLS Trigger: AGAGAGCCGATGGCTCCTGGGAGGGCTCCTGGGGTGTTTGTTTCACCTACGGCACCTGGTTTGGCTTGGAAGCGTTCGCTTGCATGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS GCA 90 bp | GTGGACTTGTCCTCGATGTGCAAGCCCCAGCCGCCATCAGGGAGCTaGACTGACCGCAGGTACCGCACCATCTCCTCTCTGTATCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VDLSSMCKPQPPSGS*TDRRYRTISSLYPA Trigger: AGCTGGATACAGAGAGGAGATGGTGCGGTACCTGCGGTCAGTGCAGCTCCCTGATGGCGGCTGGGGCTTGCACATCGAGGACAAGTCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS CCA 90 bp | GGCGGAGGCTCTGAACCAGTGGGTCCTCTGAGGCACTTAGCCGAGTaGCGTAGCAGTAACTCATGGGCAGATAGACCTGCCGGCAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GGGSEPVGPLRHLAE*RSSNSWADRPAGSD Trigger: GTCACTGCCGGCAGGTCTATCTGCCCATGAGTTACTGCTACGCCACTCGGCTAAGTGCCTCAGAGGACCCACTGGTTCAGAGCCTCCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS TCA 90 bp | TCGCACAGCCGCTCTCGGGGGATATGCTCAGTGATGGACGGACACTaGTTCTGCAGGAGCAGCACAGCCTTCAAACCCTCGGCTGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SHSRSRGICSVMDGH*FCRSSTAFKPSAVQ Trigger: CTGCACAGCCGAGGGTTTGAAGGCTGTGCTGCTCCTGCAGAATCAGTGTCCGTCCATCACTGAGCATATCCCCCGAGAGCGGCTGTGCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS GCA 90 bp | CCCATCAGGGCCCAGCAGGTGCTATGGACCTGGGACCTAGCACTCTaGACATACCGCCGCTGTTCACATGATTCAAAGTCCTCTCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PIRAQQVLWTWDLAL*TYRRCSHDSKSSPQ Trigger: CTGGGGAGAGGACTTTGAATCATGTGAACAGCGGCGGTATGTGCAGAGTGCTAGGTCCCAGGTCCATAGCACCTGCTGGGCCCTGATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS TCA 90 bp | CGGCCCACTTCCGCAGGCTGGTGCTATGGAAACGTTCATACAGGTTaGGGAGTCCATACACCACATGCAGCAGCCAGCTGTGTGGCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RPTSAGWCYGNVHTG*GVHTPHAAASCVAC Trigger: ACACGCCACACAGCTGGCTGCTGCATGTGGTGTATGGACTCCTCAACCTGTATGAACGTTTCCATAGCACCAGCCTGCGGAAGTGGGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| CDS GCA 90 bp | CGCCATCTGCTGGGACAGGAGGAAGTTGCAGGCCTGAGCTACTTCTaGACAAGCAGCCCCATCTTGGTAGGTATGCCCCATGCAAGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: RHLLGQEEVAGLSYF*TSSPILVGMPHASE Trigger: TTCGCTTGCATGGGGCATACCTACCAAGATGGGGCTGCTTGTGCAGAAGTAGCTCAGGCCTGCAACTTCCTCCTGTCCCAGCAGATGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS CCA 90 bp | TCTCATCGGGGGACACGTTGTTCCTCTGCGCTGGCCAATCGATGCTaGCGTAATCCTGCACATAGAGTTCCTGGCGGAGGCTCTGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: SHRGTRCSSALANRC*RNPAHRVPGGGSEP Trigger: TGGTTCAGAGCCTCCGCCAGGAACTCTATGTGCAGGATTACGCCAGCATCGATTGGCCAGCGCAGAGGAACAACGTGTCCCCCGATGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| CDS CCA 90 bp | GTGTGGCGTGTACATCTCATCGGGGGACACGTTGTTCCTCTGCGCTaGCCAATCGATGCTGGCGTAATCCTGCACATAGAGTTCCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VWRVHLIGGHVVPLR*PIDAGVILHIEFLA Trigger: CGCCAGGAACTCTATGTGCAGGATTACGCCAGCATCGATTGGCCAGCGCAGAGGAACAACGTGTCCCCCGATGAGATGTACACGCCACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS GCA 90 bp | ACATCTCATCGGGGGACACGTTGTTCCTCTGCGCTGGCCAATCGATaGTGGCGTAATCCTGCACATAGAGTTCCTGGCGGAGGCTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: TSHRGTRCSSALANR*WRNPAHRVPGGGSE Trigger: TTCAGAGCCTCCGCCAGGAACTCTATGTGCAGGATTACGCCAGCATCGATTGGCCAGCGCAGAGGAACAACGTGTCCCCCGATGAGATGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| CDS CCA 90 bp | AGTAACTCATGGGCAGATAGACCTGCCGGCAGTGACACCAGAGAGTaGAGGGGTGCGCTGGTACCCATTCAGGAAACAGCCACATCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SNSWADRPAGSDTRE*RGALVPIQETATSQ Trigger: CTGAGATGTGGCTGTTTCCTGAATGGGTACCAGCGCACCCCTCCACTCTCTGGTGTCACTGCCGGCAGGTCTATCTGCCCATGAGTTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS CCA 90 bp | ATACAGGTTGAGGAGTCCATACACCACATGCAGCAGCCAGCTGTGTaGCGTGTACATCTCATCGGGGGACACGTTGTTCCTCTGCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IQVEESIHHMQQPAV*RVHLIGGHVVPLRW Trigger: CCAGCGCAGAGGAACAACGTGTCCCCCGATGAGATGTACACGCCACACAGCTGGCTGCTGCATGTGGTGTATGGACTCCTCAACCTGTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR CAA 90 bp | TTCCACCCTGAACTCTGCCTGCTCTGGCCAGACACACAGTTACAATCAGGAACTTTGTCAGGATACAGGTaGGAGAAGCGGCCCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FHPELCLLWPDTQLQSGTLSGYR*EKRPRA Trigger: GGCCCTGGGCCGCTTCTCCAACCTGTATCCTGACAA...AGTTCCTGATTGTAACTGTGTGTCTGGCCAGAGCAGGCAGAGTTCAGGGTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS TCA 90 bp | GAGCGCGCACAAGGTCAGGATCATCAGGCCCAATACCCAGGATTCTaGGAGCCACATAGTTCAGGGCAGTCCCAAACACTGTGGACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: ERAQGQDHQAQYPGF*EPHSSGQSQTLWTC Trigger: ACAAGTCCACAGTGTTTGGGACTGCCCTGAACTATGTGGCTCTCAGAATCCTGGGTATTGGGCCTGATGATCCTGACCTTGTGCGCGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS GCA 90 bp | GTGCTATGGAAACGTTCATACAGGTTGAGGAGTCCATACACCACATaGAGCAGCCAGCTGTGTGGCGTGTACATCTCATCGGGGGACACG | + |
|
Preference number: 5 (lower is better) Translates to: VLWKRSYRLRSPYTT*SSQLCGVYISSGDT Trigger: CGTGTCCCCCGATGAGATGTACACGCCACACAGCTGGCTGCTGCATGTGGTGTATGGACTCCTCAACCTGTATGAACGTTTCCATAGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR CAA 90 bp | ATCCACTGCGCCTCTCTGGATCTCAAGGCTCATCTTCTTCCCTTTCTCACTGAATCATCGGGGGACACGTaGTTCCTCTGCGCTGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: IHCASLDLKAHLLPFLTESSGDT*FLCAGQ Trigger: TTGGCCAGCGCAGAGGAACAACGTGTCCCCCGATGA...TTCAGTGAGAAAGGGAAGAAGATGAGCCTTGAGATCCAGAGAGGCGCAGTGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR CAA 90 bp | CAGAGAGACTTAACCATCAAGCCCTTCAGCAGGGGATGGTGGCACACGCCTGTACTGATGGCACAGGACTaGTTGAAGACCCCAGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: QRDLTIKPFSRGWWHTPVLMAQD*LKTPEM Trigger: CATCTCTGGGGTCTTCAACAAGTCCTGTGCCATCAG...TACAGGCGTGTGCCACCATCCCCTGCTGAAGGGCTTGATGGTTAAGTCTCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS TCA 90 bp | ACCATCTCCTCTCTGTATCCAGCTGGCAGAGAGATGTGTGATATGTaGCAGGTAATCAGGAGACCTGGCAAGAGGAAGAGCGGACCACCA | + |
|
Preference number: 5 (lower is better) Translates to: TISSLYPAGREMCDM*QVIRRPGKRKSGPP Trigger: TGGTGGTCCGCTCTTCCTCTTGCCAGGTCTCCTGATTACCTGTCACATATCACACATCTCTCTGCCAGCTGGATACAGAGAGGAGATGGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS CCA 90 bp | GGCAGAAACTCAGGTCTGTGGTGTGCACCTGCCTCTAACAGTGCTTaGATAGCAAATGAAGTGTCCCAGATCTGTGATCCATTGGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GRNSGLWCAPASNSA*IANEVSQICDPLVP Trigger: GGGCACCAATGGATCACAGATCTGGGACACTTCATTTGCTATCCAAGCACTGTTAGAGGCAGGTGCACACCACAGACCTGAGTTTCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS CCA 90 bp | CACTTAGTGAAACAGTCATCAGCTGCAATGTGTTCATACAGCATCTaGACGGCCCACTTCCGCAGGCTGGTGCTATGGAAACGTTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: HLVKQSSAAMCSYSI*TAHFRRLVLWKRSY Trigger: GTATGAACGTTTCCATAGCACCAGCCTGCGGAAGTGGGCCGTCCAGATGCTGTATGAACACATTGCAGCTGATGACTGTTTCACTAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS-3UTR CAA 90 bp | GATATGATTAGCTGTCCTTGCTCCAGCACTGTCCCATGGCAGGAACCGTTACAACAGATCTGTGATCCATaGGTGCCCTGCATTTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: DMISCPCSSTVPWQEPLQQICDP*VPCIFM Trigger: CATGAAAATGCAGGGCACCAATGGATCACAGATCTG...TTGTAACGGTTCCTGCCATGGGACAGTGCTGGAGCAAGGACAGCTAATCATATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS TCA 72 bp | TCTGCCGACCCAACTCATTCTGGAGCCGCCAGCGGGTaGGATCGGTGGCGGGCTCAGTTTTATAGGGTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SADPTHSGAASG*DRWRAQFYRVP Trigger: GGGGACCCTATAAAACTGAGCCCGCCACCGATCTCACCCGCTGGCGGCTCCAGAATGAGTTGGGTCGGCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS TCA 72 bp | GATGTGCAAGCCCCAGCCGCCATCAGGGAGCTGCACTaGCCGCAGGTACCGCACCATCTCCTCTCTGTATCC | + |
|
Preference number: 6 (lower is better) Translates to: DVQAPAAIRELH*PQVPHHLLSVS Trigger: GGATACAGAGAGGAGATGGTGCGGTACCTGCGGTCAGTGCAGCTCCCTGATGGCGGCTGGGGCTTGCACATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS CCA 72 bp | TGGGCAGATAGACCTGCCGGCAGTGACACCAGAGAGTaGAGGGGTGCGCTGGTACCCATTCAGGAAACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: WADRPAGSDTRE*RGALVPIQETA Trigger: GGCTGTTTCCTGAATGGGTACCAGCGCACCCCTCCACTCTCTGGTGTCACTGCCGGCAGGTCTATCTGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS TCA 72 bp | CAGCATCGCACAGCCGCTCTCGGGGGATATGCTCAGTaGTGGACGGACACTGATTCTGCAGGAGCAGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: QHRTAALGGYAQ*WTDTDSAGAAQ Trigger: CTGTGCTGCTCCTGCAGAATCAGTGTCCGTCCATCACTGAGCATATCCCCCGAGAGCGGCTGTGCGATGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS GCA 72 bp | CGGGGGACACGTTGTTCCTCTGCGCTGGCCAATCGATaGTGGCGTAATCCTGCACATAGAGTTCCTGGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: RGTRCSSALANR*WRNPAHRVPGG Trigger: TCCGCCAGGAACTCTATGTGCAGGATTACGCCAGCATCGATTGGCCAGCGCAGAGGAACAACGTGTCCCCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS GCA 72 bp | AGCCTCCATCCGCCATCTGCTGGGACAGGAGGAAGTTaGAGGCCTGAGCTACTTCTGCACAAGCAGCCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SLHPPSAGTGGS*RPELLLHKQPH Trigger: ATGGGGCTGCTTGTGCAGAAGTAGCTCAGGCCTGCAACTTCCTCCTGTCCCAGCAGATGGCGGATGGAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS CCA 72 bp | CTGCCGGCAGTGACACCAGAGAGTGGAGGGGTGCGCTaGTACCCATTCAGGAAACAGCCACATCTCAGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LPAVTPESGGVR*YPFRKQPHLRE Trigger: TTCCCTGAGATGTGGCTGTTTCCTGAATGGGTACCAGCGCACCCCTCCACTCTCTGGTGTCACTGCCGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
||
| CDS CCA 72 bp | GGGACACGTTGTTCCTCTGCGCTGGCCAATCGATGCTaGCGTAATCCTGCACATAGAGTTCCTGGCGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: GTRCSSALANRC*RNPAHRVPGGG Trigger: GCCTCCGCCAGGAACTCTATGTGCAGGATTACGCCAGCATCGATTGGCCAGCGCAGAGGAACAACGTGTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| CDS CAA 72 bp | CAAATGTGGCCGGCGAGGGTATTGTCAGGATACAGGTaGGAGAAGCGGCCCAGGGCCCAGATGGGGAAGATG | + |
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Preference number: 6 (lower is better) Translates to: QMWPARVLSGYR*EKRPRAQMGKM Trigger: CATCTTCCCCATCTGGGCCCTGGGCCGCTTCTCCAACCTGTATCCTGACAATACCCTCGCCGGCCACATTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| CDS TCA 72 bp | CGCTCTCGGGGGATATGCTCAGTGATGGACGGACACTaGTTCTGCAGGAGCAGCACAGCCTTCAAACCCTCG | + |
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Preference number: 6 (lower is better) Translates to: RSRGICSVMDGH*FCRSSTAFKPS Trigger: CGAGGGTTTGAAGGCTGTGCTGCTCCTGCAGAATCAGTGTCCGTCCATCACTGAGCATATCCCCCGAGAGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| CDS TCA 72 bp | AAGCGAACGCTTCCAAGCCAAACCAGGTGCCGTAGGTaGAACAAACACCCCAGGAGCCCTCCCAGGAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: KRTLPSQTRCRR*NKHPRSPPRSH Trigger: ATGGCTCCTGGGAGGGCTCCTGGGGTGTTTGTTTCACCTACGGCACCTGGTTTGGCTTGGAAGCGTTCGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| CDS GCA 72 bp | CTGCACAAGCAGCCCCATCTTGGTAGGTATGCCCCATaGAAGCGAACGCTTCCAAGCCAAACCAGGTGCCGT | + |
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Preference number: 6 (lower is better) Translates to: LHKQPHLGRYAP*KRTLPSQTRCR Trigger: ACGGCACCTGGTTTGGCTTGGAAGCGTTCGCTTGCATGGGGCATACCTACCAAGATGGGGCTGCTTGTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| CDS TCA 72 bp | GGACCTAGCACTCTGCACATACCGCCGCTGTTCACATaGTTCAAAGTCCTCTCCCCAGCCTCCATCCGCCAT | + |
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Preference number: 6 (lower is better) Translates to: GPSTLHIPPLFT*FKVLSPASIRH Trigger: ATGGCGGATGGAGGCTGGGGAGAGGACTTTGAATCATGTGAACAGCGGCGGTATGTGCAGAGTGCTAGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| CDS GCA 72 bp | CTGGGACAGGAGGAAGTTGCAGGCCTGAGCTACTTCTaGACAAGCAGCCCCATCTTGGTAGGTATGCCCCAT | + |
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Preference number: 6 (lower is better) Translates to: LGQEEVAGLSYF*TSSPILVGMPH Trigger: ATGGGGCATACCTACCAAGATGGGGCTGCTTGTGCAGAAGTAGCTCAGGCCTGCAACTTCCTCCTGTCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| CDS CCA 72 bp | TCTGAACCAGTGGGTCCTCTGAGGCACTTAGCCGAGTaGCGTAGCAGTAACTCATGGGCAGATAGACCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SEPVGPLRHLAE*RSSNSWADRPA Trigger: GGCAGGTCTATCTGCCCATGAGTTACTGCTACGCCACTCGGCTAAGTGCCTCAGAGGACCCACTGGTTCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| CDS CCA 72 bp | GAGGAGTCCATACACCACATGCAGCAGCCAGCTGTGTaGCGTGTACATCTCATCGGGGGACACGTTGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: EESIHHMQQPAV*RVHLIGGHVVP Trigger: AGGAACAACGTGTCCCCCGATGAGATGTACACGCCACACAGCTGGCTGCTGCATGTGGTGTATGGACTCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| CDS CAA 90 bp | GAGGAAGTTGCAGGCCTGAGCTACTTCTGCACAAGCAGCCCCATCTaGGTAGGTATGCCCCATGCAAGCGAACGCTTCCAAGCCAAACCA | + |
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Preference number: 6 (lower is better) Translates to: EEVAGLSYFCTSSPI*VGMPHASERFQAKP Trigger: TGGTTTGGCTTGGAAGCGTTCGCTTGCATGGGGCATACCTACCAAGATGGGGCTGCTTGTGCAGAAGTAGCTCAGGCCTGCAACTTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| CDS TCA 72 bp | CAGTTTTCTGGAACCTGTGAAAGCCGCAGGAACTCGTaGGCCTTCTGCAGGCAGGGCAGAAACTCAGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: QFSGTCESRRNS*AFCRQGRNSGL Trigger: CAGACCTGAGTTTCTGCCCTGCCTGCAGAAGGCTCACGAGTTCCTGCGGCTTTCACAGGTTCCAGAAAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| CDS CCA 72 bp | GTACATCTCATCGGGGGACACGTTGTTCCTCTGCGCTaGCCAATCGATGCTGGCGTAATCCTGCACATAGAG | + |
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Preference number: 6 (lower is better) Translates to: VHLIGGHVVPLR*PIDAGVILHIE Trigger: CTCTATGTGCAGGATTACGCCAGCATCGATTGGCCAGCGCAGAGGAACAACGTGTCCCCCGATGAGATGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| CDS TCA 72 bp | TCCGCAGGCTGGTGCTATGGAAACGTTCATACAGGTTaGGGAGTCCATACACCACATGCAGCAGCCAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: SAGWCYGNVHTG*GVHTPHAAASC Trigger: ACAGCTGGCTGCTGCATGTGGTGTATGGACTCCTCAACCTGTATGAACGTTTCCATAGCACCAGCCTGCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| CDS TCA 72 bp | TTTTCATGCCATCAAGGCCCAGCCAAAGGTAATCTTTaGTCCGAGAAACGTGCTCCTGGAAGGCCGGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: FSCHQGPAKGNL*SEKRAPGRPGR Trigger: CCTCCCCGGCCTTCCAGGAGCACGTTTCTCGGATCAAAGATTACCTTTGGCTGGGCCTTGATGGCATGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| CDS TCA 72 bp | TGCAGTCAGCAACGATCCAGCCACAGTCCAGTGTGCTaGAGGAGAAACCACCCTTGCGCATATGGCGATAGT | + |
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Preference number: 6 (lower is better) Translates to: CSQQRSSHSPVC*RRNHPCAYGDS Trigger: ACTATCGCCATATGCGCAAGGGTGGTTTCTCCTTCAGCACACTGGACTGTGGCTGGATCGTTGCTGACTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| CDS TCA 72 bp | GCACAGGACTTGTTGAAGACCCCAGAGATGTTCTCCTaGGGCCAGTCTCCATTGGGTAACTGCTTCCCTAGC | + |
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Preference number: 6 (lower is better) Translates to: AQDLLKTPEMFS*GQSPLGNCFPS Trigger: GCTAGGGAAGCAGTTACCCAATGGAGACTGGCCTCAGGAGAACATCTCTGGGGTCTTCAACAAGTCCTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| CDS TCA 72 bp | CAAGGTCAGGATCATCAGGCCCAATACCCAGGATTCTaGGAGCCACATAGTTCAGGGCAGTCCCAAACACTG | + |
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Preference number: 6 (lower is better) Translates to: QGQDHQAQYPGF*EPHSSGQSQTL Trigger: CAGTGTTTGGGACTGCCCTGAACTATGTGGCTCTCAGAATCCTGGGTATTGGGCCTGATGATCCTGACCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| CDS CAA 90 bp | AAGGCCGGGGAGGATGGTCCATCCACTGACCAACGAACAAGCATGTaGATGGTCTTTGAGATCGGGCCGATGCTGATGCACTTAGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: KAGEDGPSTDQRTSM*MVFEIGPMLMHLVK Trigger: TTTCACTAAGTGCATCAGCATCGGCCCGATCTCAAAGACCATCAACATGCTTGTTCGTTGGTCAGTGGATGGACCATCCTCCCCGGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| CDS CCA 72 bp | AAACAGTCATCAGCTGCAATGTGTTCATACAGCATCTaGACGGCCCACTTCCGCAGGCTGGTGCTATGGAAA | + |
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Preference number: 6 (lower is better) Translates to: KQSSAAMCSYSI*TAHFRRLVLWK Trigger: TTTCCATAGCACCAGCCTGCGGAAGTGGGCCGTCCAGATGCTGTATGAACACATTGCAGCTGATGACTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| CDS GCA 72 bp | GCCGATGCTGATGCACTTAGTGAAACAGTCATCAGCTaGAATGTGTTCATACAGCATCTGGACGGCCCACTT | + |
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Preference number: 6 (lower is better) Translates to: ADADALSETVIS*NVFIQHLDGPL Trigger: AAGTGGGCCGTCCAGATGCTGTATGAACACATTGCAGCTGATGACTGTTTCACTAAGTGCATCAGCATCGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| CDS GCA 72 bp | CCTGTAGTCTGGGAAGTGTTCATGGAAATGCTTCAGTaGCTGCATCACAGCGGAGGTACACTCTACATACGT | + |
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Preference number: 6 (lower is better) Translates to: PVVWEVFMEMLQ*LHHSGGTLYIR Trigger: ACGTATGTAGAGTGTACCTCCGCTGTGATGCAGGCACTGAAGCATTTCCATGAACACTTCCCAGACTACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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| CDS CCA 72 bp | TCAGGTCTGTGGTGTGCACCTGCCTCTAACAGTGCTTaGATAGCAAATGAAGTGTCCCAGATCTGTGATCCA | + |
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Preference number: 6 (lower is better) Translates to: SGLWCAPASNSA*IANEVSQICDP Trigger: TGGATCACAGATCTGGGACACTTCATTTGCTATCCAAGCACTGTTAGAGGCAGGTGCACACCACAGACCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048678.7 |
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