Pregenerated sensors for LSP1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000018819

Ensembl transcript IDs: ENSMUST00000018963.11, ENSMUST00000038946.9, ENSMUST00000105966.2, ENSMUST00000105967.8, ENSMUST00000105968.8, ENSMUST00000149521.8

Found 224 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	AGAAGATGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTaGTTGTTGGAGGCAGGAGAGCAGGCCAGACTGGCAACAGGAAGC	+
Preference number: 1 (lower is better) Translates to: RRWRVQEQKERLSAA*LLEAGEQARLATGS Trigger: GCTTCCTGTTGCCAGTCTGGCCTGCTCTCCTGCCTCCAACAACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCATCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR CCA 90 bp	AGTCCTGAGCATTCAGCATGGGGACAGTGTCCCCTTGGATCTGGTTaGGATGCTTGCCTTCTCTCCTTCATCCTTCCTTGGGAGCTCTTG	+
Preference number: 1 (lower is better) Translates to: SPEHSAWGQCPLGSG*DACLLSFILPWELL Trigger: CAAGAGCTCCCAAGGAAGGATGAAGGAGAGAAGGCAAGCATCCCAACCAGATCCAAGGGGACACTGTCCCCATGCTGAATGCTCAGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR TCA 90 bp	ACACTGCAAGGCCAAAAGACAAGACAGAGTGGTTGCCCACAGAGCTaGTCAAGTCTCAAGTGGCCAACAGATATGGCCCTTTCTGTTTTG	+
Preference number: 1 (lower is better) Translates to: TLQGQKTRQSGCPQS*SSLKWPTDMALSVL Trigger: CAAAACAGAAAGGGCCATATCTGTTGGCCACTTGAGACTTGATCAGCTCTGTGGGCAACCACTCTGTCTTGTCTTTTGGCCTTGCAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR TCA 90 bp	GCTGATCAAGTCTCAAGTGGCCAACAGATATGGCCCTTTCTGTTTTaGTCACCGTGTTCCCTGTTAGTGAGCACAGGAGATCCAAATGCA	+
Preference number: 1 (lower is better) Translates to: ADQVSSGQQIWPFLF*SPCSLLVSTGDPNA Trigger: TGCATTTGGATCTCCTGTGCTCACTAACAGGGAACACGGTGATCAAAACAGAAAGGGCCATATCTGTTGGCCACTTGAGACTTGATCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR CAA 90 bp	GAGAAGATGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTaGGTTGTTGGAGGCAGGAGAGCAGGCCAGACTGGCAACAGGAAG	+
Preference number: 2 (lower is better) Translates to: EKMEGPGAKGEAIGS*VVGGRRAGQTGNRK Trigger: CTTCCTGTTGCCAGTCTGGCCTGCTCTCCTGCCTCCAACAACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCATCTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CCA 90 bp	GCAGGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTCCCCTTGGATCTAGGCTATCGGCAGCTTaGTTGTTGGAGGCAGGAGAG	+
Preference number: 2 (lower is better) Translates to: AGPKSPEHSAWGQCPLGSRLSAA*LLEAGE Trigger: CTCTCCTGCCTCCAACAACCAAGCTGCCGATAGCCT...AGATCCAAGGGGACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CCA 90 bp	TCCTTCATCCTTCCTTGGGAGCTCTTGGCTCCCCTAGGGACTGGTCCCTTTAGCAGGCTATCGGCAGCTTaGTTGTTGGAGGCAGGAGAG	+
Preference number: 2 (lower is better) Translates to: SFILPWELLAPLGTGPFSRLSAA*LLEAGE Trigger: CTCTCCTGCCTCCAACAACCAAGCTGCCGATAGCCT...GCTAAAGGGACCAGTCCCTAGGGGAGCCAAGAGCTCCCAAGGAAGGATGAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR TCA 90 bp	ACAGGGCAGGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTCCCCTTGGGGTTGGTCAAAGGATaGGAGGGAAGAGAAGATGGA	+
Preference number: 2 (lower is better) Translates to: TGQDPRVLSIQHGDSVPLGLVKG*EGREDG Trigger: TCCATCTTCTCTTCCCTCTCATCCTTTGACCAACCC...CAAGGGGACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCCTGCCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CCA 90 bp	TCTCTCCTTCATCCTTCCTTGGGAGCTCTTGGCTCCCCTAGGGACTGGTCCCTTCAGGAAGCAATTTCTTaGTCAGGGCTGGGAGTGGCA	+
Preference number: 2 (lower is better) Translates to: SLLHPSLGALGSPRDWSLQEAIS*SGLGVA Trigger: TGCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTG...AAGGGACCAGTCCCTAGGGGAGCCAAGAGCTCCCAAGGAAGGATGAAGGAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CCA 90 bp	CAAAATGAGGGATCCGTAAACAGGGCAGGACCCAAGAGTCCTGAGCATTCAGCACGGCAGCTTGGTTGTTaGAGGCAGGAGAGCAGGCCA	+
Preference number: 2 (lower is better) Translates to: QNEGSVNRAGPKSPEHSARQLGC*RQESRP Trigger: TGGCCTGCTCTCCTGCCTCCAACAACCAAGCTGCCG...TGCTGAATGCTCAGGACTCTTGGGTCCTGCCCTGTTTACGGATCCCTCATTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR TCA 90 bp	TCCTTCATCCTTCCTTGGGAGCTCTTGGCTCCCCTAGGGACTGGTCCCTTTAGCGGGTTGGTCAAAGGATaGGAGGGAAGAGAAGATGGA	+
Preference number: 2 (lower is better) Translates to: SFILPWELLAPLGTGPFSGLVKG*EGREDG Trigger: TCCATCTTCTCTTCCCTCTCATCCTTTGACCAACCC...GCTAAAGGGACCAGTCCCTAGGGGAGCCAAGAGCTCCCAAGGAAGGATGAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CCA 90 bp	CCCAGCTTGGGTCACCTCATACCTCAGATCCTGGAACATAACACACTGCAAGGCCCCCTTGGATCTGGTTaGGATGCTTGCCTTCTCTCC	+
Preference number: 2 (lower is better) Translates to: PSLGHLIPQILEHNTLQGPLGSG*DACLLS Trigger: GGAGAGAAGGCAAGCATCCCAACCAGATCCAAGGGG...GCCTTGCAGTGTGTTATGTTCCAGGATCTGAGGTATGAGGTGACCCAAGCTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CCA 90 bp	AGGGAAGAGAAGATGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGAGAGCAGGCCAGACTaGCAACAGGAAGCAATTTCT	+
Preference number: 2 (lower is better) Translates to: REEKMEGPGAKGEAIGSLESRPD*QQEAIS Trigger: AGAAATTGCTTCCTGTTGCCAGTCTGGCCTGCTCTC...CAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCATCTTCTCTTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CCA 90 bp	GCTGATGGTGAGAAGCAGAGTTGGAGGGTTGGTCAAAGGATGAGAGGGAAGAGACAGGAAGCAATTTCTTaGTCAGGGCTGGGAGTGGCA	+
Preference number: 2 (lower is better) Translates to: ADGEKQSWRVGQRMRGKRQEAIS*SGLGVA Trigger: TGCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTG...TCTCTTCCCTCTCATCCTTTGACCAACCCTCCAACTCTGCTTCTCACCATCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CCA 90 bp	CAAAATGAGGGATCCGTAAACAGGGCAGGACCCAAGAGTCCTGAGCATTCAGCACAGGAAGCAATTTCTTaGTCAGGGCTGGGAGTGGCA	+
Preference number: 2 (lower is better) Translates to: QNEGSVNRAGPKSPEHSAQEAIS*SGLGVA Trigger: TGCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTG...TGCTGAATGCTCAGGACTCTTGGGTCCTGCCCTGTTTACGGATCCCTCATTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CCA 90 bp	TGGTTGCCCACAGAGCTGATCAAGTCTCAAGTGGCCAACAGATATGGCCCTTTCTCCTTCATCCTTCCTTaGGAGCTCTTGGCTCCCCTA	+
Preference number: 2 (lower is better) Translates to: WLPTELIKSQVANRYGPFSFILP*ELLAPL Trigger: TAGGGGAGCCAAGAGCTCCCAAGGAAGGATGAAGGA...GAAAGGGCCATATCTGTTGGCCACTTGAGACTTGATCAGCTCTGTGGGCAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR TCA 90 bp	TTGGGTCACCTCATACCTCAGATCCTGGAACATAACACACTGCAAGGCCAAAAGGGTTGCCCACAGAGCTaGTCAAGTCTCAAGTGGCCA	+
Preference number: 2 (lower is better) Translates to: LGHLIPQILEHNTLQGQKGCPQS*SSLKWP Trigger: TGGCCACTTGAGACTTGATCAGCTCTGTGGGCAACC...CTTTTGGCCTTGCAGTGTGTTATGTTCCAGGATCTGAGGTATGAGGTGACCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CCA 90 bp	TGGCCAACAGATATGGCCCTTTCTGTTTTGATCACCGTGTTCCCTGTTAGTGAGCCTGAGCATTCAGCATaGGGACAGTGTCCCCTTGGA	+
Preference number: 2 (lower is better) Translates to: WPTDMALSVLITVFPVSEPEHSA*GQCPLG Trigger: TCCAAGGGGACACTGTCCCCATGCTGAATGCTCAGG...CTCACTAACAGGGAACACGGTGATCAAAACAGAAAGGGCCATATCTGTTGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR TCA 90 bp	ACACAAAATGAGGGATCCGTAAACAGGGCAGGACCCAAGAGTCCTGAGCATTCAGGGTTGGTCAAAGGATaGGAGGGAAGAGAAGATGGA	+
Preference number: 2 (lower is better) Translates to: TQNEGSVNRAGPKSPEHSGLVKG*EGREDG Trigger: TCCATCTTCTCTTCCCTCTCATCCTTTGACCAACCC...TGAATGCTCAGGACTCTTGGGTCCTGCCCTGTTTACGGATCCCTCATTTTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR GCA 90 bp	CAAAATGAGGGATCCGTAAACAGGGCAGGACCCAAGAGTCCTGAGCATTCAGCATCTGGTTGGGATGCTTaGCTTCTCTCCTTCATCCTT	+
Preference number: 2 (lower is better) Translates to: QNEGSVNRAGPKSPEHSASGWDA*LLSFIL Trigger: AAGGATGAAGGAGAGAAGGCAAGCATCCCAACCAGA...TGCTGAATGCTCAGGACTCTTGGGTCCTGCCCTGTTTACGGATCCCTCATTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR GCA 90 bp	TGGTTGCCCACAGAGCTGATCAAGTCTCAAGTGGCCAACAGATATGGCCCTTTCTCTGGTTGGGATGCTTaGCTTCTCTCCTTCATCCTT	+
Preference number: 2 (lower is better) Translates to: WLPTELIKSQVANRYGPFSGWDA*LLSFIL Trigger: AAGGATGAAGGAGAGAAGGCAAGCATCCCAACCAGA...GAAAGGGCCATATCTGTTGGCCACTTGAGACTTGATCAGCTCTGTGGGCAACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CCA 90 bp	TTGGGTCACCTCATACCTCAGATCCTGGAACATAACACACTGCAAGGCCAAAAGCAGGAAGCAATTTCTTaGTCAGGGCTGGGAGTGGCA	+
Preference number: 2 (lower is better) Translates to: LGHLIPQILEHNTLQGQKQEAIS*SGLGVA Trigger: TGCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTG...CTTTTGGCCTTGCAGTGTGTTATGTTCCAGGATCTGAGGTATGAGGTGACCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CCA 90 bp	ACATCCATTATTAATACCCCAGCTTGGGTCACCTCATACCTCAGATCCTGGAACCCCCTTGGATCTGGTTaGGATGCTTGCCTTCTCTCC	+
Preference number: 2 (lower is better) Translates to: TSIINTPAWVTSYLRSWNPLGSG*DACLLS Trigger: GGAGAGAAGGCAAGCATCCCAACCAGATCCAAGGGG...GTTCCAGGATCTGAGGTATGAGGTGACCCAAGCTGGGGTATTAATAATGGATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CCA 90 bp	GAGATCCAAATGCATAGGGGACACTCAATGCACTTTATTACACAAAATGAGGGACGGCAGCTTGGTTGTTaGAGGCAGGAGAGCAGGCCA	+
Preference number: 2 (lower is better) Translates to: EIQMHRGHSMHFITQNEGRQLGC*RQESRP Trigger: TGGCCTGCTCTCCTGCCTCCAACAACCAAGCTGCCG...TCCCTCATTTTGTGTAATAAAGTGCATTGAGTGTCCCCTATGCATTTGGATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CCA 90 bp	TTTATTACACAAAATGAGGGATCCGTAAACAGGGCAGGACCCAAGAGTCCTGAGTCCTTCATCCTTCCTTaGGAGCTCTTGGCTCCCCTA	+
Preference number: 2 (lower is better) Translates to: FITQNEGSVNRAGPKSPESFILP*ELLAPL Trigger: TAGGGGAGCCAAGAGCTCCCAAGGAAGGATGAAGGA...CTCAGGACTCTTGGGTCCTGCCCTGTTTACGGATCCCTCATTTTGTGTAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR TCA 90 bp	TCAATGCACTTTATTACACAAAATGAGGGATCCGTAAACAGGGCAGGACCCAAGGGGTTGGTCAAAGGATaGGAGGGAAGAGAAGATGGA	+
Preference number: 2 (lower is better) Translates to: SMHFITQNEGSVNRAGPKGLVKG*EGREDG Trigger: TCCATCTTCTCTTCCCTCTCATCCTTTGACCAACCC...CTTGGGTCCTGCCCTGTTTACGGATCCCTCATTTTGTGTAATAAAGTGCATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CCA 90 bp	AGGAGATCCAAATGCATAGGGGACACTCAATGCACTTTATTACACAAAATGAGGAGGCTATCGGCAGCTTaGTTGTTGGAGGCAGGAGAG	+
Preference number: 2 (lower is better) Translates to: RRSKCIGDTQCTLLHKMRRLSAA*LLEAGE Trigger: CTCTCCTGCCTCCAACAACCAAGCTGCCGATAGCCT...CCTCATTTTGTGTAATAAAGTGCATTGAGTGTCCCCTATGCATTTGGATCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR TCA 90 bp	CATAGGGGACACTCAATGCACTTTATTACACAAAATGAGGGATCCGTAAACAGGGGGTTGGTCAAAGGATaGGAGGGAAGAGAAGATGGA	+
Preference number: 2 (lower is better) Translates to: HRGHSMHFITQNEGSVNRGLVKG*EGREDG Trigger: TCCATCTTCTCTTCCCTCTCATCCTTTGACCAACCC...CCTGTTTACGGATCCCTCATTTTGTGTAATAAAGTGCATTGAGTGTCCCCTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000018963.11 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR TCA 90 bp	ACAGAGCTGATCAAGTCTCAAGTGGCCAACAGATATGGCCCTTTCTGTTTTGATCTTTATTACACAAAATaGGGGATCCGTAAACAGGGC	+
Preference number: 2 (lower is better) Translates to: TELIKSQVANRYGPFCFDLYYTK*GIRKQG Trigger: GCCCTGTTTACGGATCCCTCATTTTGTGTAATAAAG...ATCAAAACAGAAAGGGCCATATCTGTTGGCCACTTGAGACTTGATCAGCTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CAA 90 bp	TCCTTCATCCTTCCTTGGGAGCTCTTGGCTCCCCTAGGGACTGGTCCCTTTAGCTCGGCAGCTTGGTTGTaGGAGGCAGGAGAGCAGGCC	+
Preference number: 3 (lower is better) Translates to: SFILPWELLAPLGTGPFSSAAWL*EAGEQA Trigger: GGCCTGCTCTCCTGCCTCCAACAACCAAGCTGCCGA...GCTAAAGGGACCAGTCCCTAGGGGAGCCAAGAGCTCCCAAGGAAGGATGAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CAA 90 bp	GCAGGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTCCCCTTGGATCTCTTCCTTGGGAGCTCTaGGCTCCCCTAGGGACTGGT	+
Preference number: 3 (lower is better) Translates to: AGPKSPEHSAWGQCPLGSLPWEL*APLGTG Trigger: ACCAGTCCCTAGGGGAGCCAAGAGCTCCCAAGGAAG...AGATCCAAGGGGACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CAA 90 bp	GAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTGTTGGAGGCAGGAGAGCAGGCCACAGGAAGCAATTTCTaGGTCAGGGCTGGGAGTGGC	+
Preference number: 3 (lower is better) Translates to: EQKERLSAAWLLEAGEQATGSNF*VRAGSG Trigger: GCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTGT...GGCCTGCTCTCCTGCCTCCAACAACCAAGCTGCCGATAGCCTCTCCTTTTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR CCA 72 bp	CAGACTGGCAACAGGAAGCAATTTCTTGGTCAGGGCTaGGAGTGGCATCCGGCCGGAGTCTATCCAGGATGC	+
Preference number: 3 (lower is better) Translates to: QTGNRKQFLGQG*EWHPAGVYPGC Trigger: GCATCCTGGATAGACTCCGGCCGGATGCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTGTTGCCAGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000149521.8
3UTR-3UTR CAA 90 bp	TCCGTAAACAGGGCAGGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTCTCCTTCATCCTTCCTaGGGAGCTCTTGGCTCCCCT	+
Preference number: 3 (lower is better) Translates to: SVNRAGPKSPEHSAWGQCLLHPS*GALGSP Trigger: AGGGGAGCCAAGAGCTCCCAAGGAAGGATGAAGGAG...ACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCCTGCCCTGTTTACGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR CCA 72 bp	CAGACTGGCAACAGGAAGCAATTTCTTGGTCAGGGCTaGGAGTGGCATCCGGCCGGAGTCAGGATGCAAACA	+
Preference number: 3 (lower is better) Translates to: QTGNRKQFLGQG*EWHPAGVRMQT Trigger: TGTTTGCATCCTGACTCCGGCCGGATGCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTGTTGCCAGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105968.8
3UTR CCA 72 bp	GGCAACAGGAAGCAATTTCTTGGTCAGGGCTGGGAGTaGCATCCGGCCGGAGTCTATCCAGGATGCAAACAT	+
Preference number: 3 (lower is better) Translates to: GNRKQFLGQGWE*HPAGVYPGCKH Trigger: ATGTTTGCATCCTGGATAGACTCCGGCCGGATGCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTGTTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000149521.8
3UTR-3UTR CAA 90 bp	TGGTTGCCCACAGAGCTGATCAAGTCTCAAGTGGCCAACAGATATGGCCCTTTCCTCCTTCATCCTTCCTaGGGAGCTCTTGGCTCCCCT	+
Preference number: 3 (lower is better) Translates to: WLPTELIKSQVANRYGPFLLHPS*GALGSP Trigger: AGGGGAGCCAAGAGCTCCCAAGGAAGGATGAAGGAG...GAAAGGGCCATATCTGTTGGCCACTTGAGACTTGATCAGCTCTGTGGGCAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CAA 90 bp	CAAAATGAGGGATCCGTAAACAGGGCAGGACCCAAGAGTCCTGAGCATTCAGCAACAGGAAGCAATTTCTaGGTCAGGGCTGGGAGTGGC	+
Preference number: 3 (lower is better) Translates to: QNEGSVNRAGPKSPEHSATGSNF*VRAGSG Trigger: GCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTGT...TGCTGAATGCTCAGGACTCTTGGGTCCTGCCCTGTTTACGGATCCCTCATTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CAA 90 bp	TACCTCAGATCCTGGAACATAACACACTGCAAGGCCAAAAGACAAGACAGAGTGCTTCCTTGGGAGCTCTaGGCTCCCCTAGGGACTGGT	+
Preference number: 3 (lower is better) Translates to: YLRSWNITHCKAKRQDRVLPWEL*APLGTG Trigger: ACCAGTCCCTAGGGGAGCCAAGAGCTCCCAAGGAAG...CACTCTGTCTTGTCTTTTGGCCTTGCAGTGTGTTATGTTCCAGGATCTGAGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CAA 90 bp	GCCCACAGAGCTGATCAAGTCTCAAGTGGCCAACAGATATGGCCCTTTCTGTTTTCCCCTTGGATCTGGTaGGGATGCTTGCCTTCTCTC	+
Preference number: 3 (lower is better) Translates to: AHRADQVSSGQQIWPFLFSPWIW*GCLPSL Trigger: GAGAGAAGGCAAGCATCCCAACCAGATCCAAGGGGA...AAACAGAAAGGGCCATATCTGTTGGCCACTTGAGACTTGATCAGCTCTGTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CAA 90 bp	TCAAGTCTCAAGTGGCCAACAGATATGGCCCTTTCTGTTTTGATCACCGTGTTCGAGGCTATCGGCAGCTaGGTTGTTGGAGGCAGGAGA	+
Preference number: 3 (lower is better) Translates to: SSLKWPTDMALSVLITVFEAIGS*VVGGRR Trigger: TCTCCTGCCTCCAACAACCAAGCTGCCGATAGCCTC...GAACACGGTGATCAAAACAGAAAGGGCCATATCTGTTGGCCACTTGAGACTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CAA 90 bp	CTCAGATCCTGGAACATAACACACTGCAAGGCCAAAAGACAAGACAGAGTGGTTCTCCTTCATCCTTCCTaGGGAGCTCTTGGCTCCCCT	+
Preference number: 3 (lower is better) Translates to: LRSWNITHCKAKRQDRVVLLHPS*GALGSP Trigger: AGGGGAGCCAAGAGCTCCCAAGGAAGGATGAAGGAG...AACCACTCTGTCTTGTCTTTTGGCCTTGCAGTGTGTTATGTTCCAGGATCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR TCA 72 bp	GGCCAAAAGACAAGACAGAGTGGTTGCCCACAGAGCTaGTCAAGTCTCAAGTGGCCAACAGATATGGCCCTT	+
Preference number: 3 (lower is better) Translates to: GQKTRQSGCPQS*SSLKWPTDMAL Trigger: AAGGGCCATATCTGTTGGCCACTTGAGACTTGATCAGCTCTGTGGGCAACCACTCTGTCTTGTCTTTTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR CCA 72 bp	GGACTGGTCCCTTTAGCTGATGGTGAGAAGCAGAGTTaGAGGGTTGGTCAAAGGATGAGAGGGAAGAGAAGA	+
Preference number: 3 (lower is better) Translates to: GLVPLADGEKQS*RVGQRMRGKRR Trigger: TCTTCTCTTCCCTCTCATCCTTTGACCAACCCTCCAACTCTGCTTCTCACCATCAGCTAAAGGGACCAGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CAA 90 bp	TTTATTACACAAAATGAGGGATCCGTAAACAGGGCAGGACCCAAGAGTCCTGAGTCCCCTTGGATCTGGTaGGGATGCTTGCCTTCTCTC	+
Preference number: 3 (lower is better) Translates to: FITQNEGSVNRAGPKSPESPWIW*GCLPSL Trigger: GAGAGAAGGCAAGCATCCCAACCAGATCCAAGGGGA...CTCAGGACTCTTGGGTCCTGCCCTGTTTACGGATCCCTCATTTTGTGTAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR GCA 72 bp	GTCACCTCATACCTCAGATCCTGGAACATAACACACTaGAAGGCCAAAAGACAAGACAGAGTGGTTGCCCAC	+
Preference number: 3 (lower is better) Translates to: VTSYLRSWNITH*KAKRQDRVVAH Trigger: GTGGGCAACCACTCTGTCTTGTCTTTTGGCCTTGCAGTGTGTTATGTTCCAGGATCTGAGGTATGAGGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CAA 90 bp	CATAGGGGACACTCAATGCACTTTATTACACAAAATGAGGGATCCGTAAACAGGGAGGCTATCGGCAGCTaGGTTGTTGGAGGCAGGAGA	+
Preference number: 3 (lower is better) Translates to: HRGHSMHFITQNEGSVNREAIGS*VVGGRR Trigger: TCTCCTGCCTCCAACAACCAAGCTGCCGATAGCCTC...CCTGTTTACGGATCCCTCATTTTGTGTAATAAAGTGCATTGAGTGTCCCCTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018963.11 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CAA 90 bp	GAGCACAGGAGATCCAAATGCATAGGGGACACTCAATGCACTTTATTACACAAACTCCTTCATCCTTCCTaGGGAGCTCTTGGCTCCCCT	+
Preference number: 3 (lower is better) Translates to: EHRRSKCIGDTQCTLLHKLLHPS*GALGSP Trigger: AGGGGAGCCAAGAGCTCCCAAGGAAGGATGAAGGAG...TTTGTGTAATAAAGTGCATTGAGTGTCCCCTATGCATTTGGATCTCCTGTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR TCA 72 bp	GTCTCAAGTGGCCAACAGATATGGCCCTTTCTGTTTTaGTCACCGTGTTCCCTGTTAGTGAGCACAGGAGAT	+
Preference number: 3 (lower is better) Translates to: VSSGQQIWPFLF*SPCSLLVSTGD Trigger: ATCTCCTGTGCTCACTAACAGGGAACACGGTGATCAAAACAGAAAGGGCCATATCTGTTGGCCACTTGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CAA 90 bp	CATAGGGGACACTCAATGCACTTTATTACACAAAATGAGGGATCCGTAAACAGGACAGGAAGCAATTTCTaGGTCAGGGCTGGGAGTGGC	+
Preference number: 3 (lower is better) Translates to: HRGHSMHFITQNEGSVNRTGSNF*VRAGSG Trigger: GCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTGT...CCTGTTTACGGATCCCTCATTTTGTGTAATAAAGTGCATTGAGTGTCCCCTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018963.11 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CAA 90 bp	AGGAGATCCAAATGCATAGGGGACACTCAATGCACTTTATTACACAAAATGAGGACAGGAAGCAATTTCTaGGTCAGGGCTGGGAGTGGC	+
Preference number: 3 (lower is better) Translates to: RRSKCIGDTQCTLLHKMRTGSNF*VRAGSG Trigger: GCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTGT...CCTCATTTTGTGTAATAAAGTGCATTGAGTGTCCCCTATGCATTTGGATCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR-3UTR CAA 90 bp	ATCCAAATGCATAGGGGACACTCAATGCACTTTATTACACAAAATGAGGGATCCTCCCCTTGGATCTGGTaGGGATGCTTGCCTTCTCTC	+
Preference number: 3 (lower is better) Translates to: IQMHRGHSMHFITQNEGSSPWIW*GCLPSL Trigger: GAGAGAAGGCAAGCATCCCAACCAGATCCAAGGGGA...GGATCCCTCATTTTGTGTAATAAAGTGCATTGAGTGTCCCCTATGCATTTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8 ENSMUST00000149521.8
3UTR GCA 72 bp	ACCGTGTTCCCTGTTAGTGAGCACAGGAGATCCAAATaGATAGGGGACACTCAATGCACTTTATTACACAAA	+
Preference number: 3 (lower is better) Translates to: TVFPVSEHRRSK*IGDTQCTLLHK Trigger: TTTGTGTAATAAAGTGCATTGAGTGTCCCCTATGCATTTGGATCTCCTGTGCTCACTAACAGGGAACACGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS-3UTR TCA 90 bp	GCAACAGGAAGCAATTTCTTGGTCAGGGCTGGGAGTGGCATCCGGCCGGAGTCTCTCTCTCGCTCCCGTTaGCGCTGCTCACGGGCAGCC	+
Preference number: 4 (lower is better) Translates to: ATGSNFLVRAGSGIRPESLSRSR*RCSRAA Trigger: GGCTGCCCGTGAGCAGCGTCAACGGGAGCGAGAGAG...AGACTCCGGCCGGATGCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTGTTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8
CDS-3UTR TCA 90 bp	GGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTGTTGGAGGCAGCTCTCTCGCTCCCGTTaGCGCTGCTCACGGGCAGCC	+
Preference number: 4 (lower is better) Translates to: GGSRSKRRGYRQLGCWRQLSRSR*RCSRAA Trigger: GGCTGCCCGTGAGCAGCGTCAACGGGAGCGAGAGAG...CTGCCTCCAACAACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR TCA 90 bp	GGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTGTTGGAGGCAGAAGGGCTGGGGGTCCTaGCCTCTTCCGCCTCCCCAG	+
Preference number: 4 (lower is better) Translates to: GGSRSKRRGYRQLGCWRQKGWGS*PLPPPQ Trigger: CTGGGGAGGCGGAAGAGGTCAGGACCCCCAGCCCTT...CTGCCTCCAACAACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000105966.2 ENSMUST00000105967.8
CDS-3UTR TCA 90 bp	GCAGGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTCCCCTTGGATCTCTCTCTCGCTCCCGTTaGCGCTGCTCACGGGCAGCC	+
Preference number: 4 (lower is better) Translates to: AGPKSPEHSAWGQCPLGSLSRSR*RCSRAA Trigger: GGCTGCCCGTGAGCAGCGTCAACGGGAGCGAGAGAG...AGATCCAAGGGGACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR TCA 90 bp	CAGGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTCCCCTTGGATCTGCTCTCTCGCTCCCGTTaGCGCTGCTCACGGGCAGCC	+
Preference number: 4 (lower is better) Translates to: QDPRVLSIQHGDSVPLDLLSRSR*RCSRAA Trigger: GGCTGCCCGTGAGCAGCGTCAACGGGAGCGAGAGAG...CAGATCCAAGGGGACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR TCA 90 bp	GGGAAGAGAAGATGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGAAGGGCTGGGGGTCCTaGCCTCTTCCGCCTCCCCAG	+
Preference number: 4 (lower is better) Translates to: GKRRWRVQEQKERLSAAWKGWGS*PLPPPQ Trigger: CTGGGGAGGCGGAAGAGGTCAGGACCCCCAGCCCTT...CCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCATCTTCTCTTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000105966.2 ENSMUST00000105967.8
3UTR CAA 72 bp	GAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTaGGTTGTTGGAGGCAGGAGAGCAGGCCAGACTGGC	+
Preference number: 4 (lower is better) Translates to: EGPGAKGEAIGS*VVGGRRAGQTG Trigger: GCCAGTCTGGCCTGCTCTCCTGCCTCCAACAACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS-3UTR TCA 90 bp	GAGTGGTTGCCCACAGAGCTGATCAAGTCTCAAGTGGCCAACAGATATGGCCCTCTCTCTCGCTCCCGTTaGCGCTGCTCACGGGCAGCC	+
Preference number: 4 (lower is better) Translates to: EWLPTELIKSQVANRYGPLSRSR*RCSRAA Trigger: GGCTGCCCGTGAGCAGCGTCAACGGGAGCGAGAGAG...AGGGCCATATCTGTTGGCCACTTGAGACTTGATCAGCTCTGTGGGCAACCACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	GACTGGCAACAGGAAGCAATTTCTTGGTCAGGGCTGGGAGTGGCATCCGGCCGGGAGTGTCTGCTGTCCTaGCTGTTCCAGGGAATGGCC	+
Preference number: 4 (lower is better) Translates to: DWQQEAISWSGLGVASGRECLLS*LFQGMA Trigger: GGCCATTCCCTGGAACAGCCAGGACAGCAGACACTC...CCGGCCGGATGCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTGTTGCCAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR GCA 90 bp	AGCAGGCCAGACTGGCAACAGGAAGCAATTTCTTGGTCAGGGCTGGGAGTGGCAGGGTTCAGTCCCTTCTaGAGTCCCCTCATTCCCCCA	+
Preference number: 4 (lower is better) Translates to: SRPDWQQEAISWSGLGVAGFSPF*SPLIPP Trigger: TGGGGGAATGAGGGGACTGCAGAAGGGACTGAACCC...TGCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTGTTGCCAGTCTGGCCTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR TCA 90 bp	TCTCTCCTTCATCCTTCCTTGGGAGCTCTTGGCTCCCCTAGGGACTGGTCCCTTCTCTCCACTGAGTTGTaGGCCTCAGCAGCTTCTCCA	+
Preference number: 4 (lower is better) Translates to: SLLHPSLGALGSPRDWSLLSTEL*ASAASP Trigger: TGGAGAAGCTGCTGAGGCTCACAACTCAGTGGAGAG...AAGGGACCAGTCCCTAGGGGAGCCAAGAGCTCCCAAGGAAGGATGAAGGAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038946.9 ENSMUST00000105966.2
CDS-3UTR TCA 90 bp	CAGGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTCCCCTTGGATCTGCTCTCCACTGAGTTGTaGGCCTCAGCAGCTTCTCCA	+
Preference number: 4 (lower is better) Translates to: QDPRVLSIQHGDSVPLDLLSTEL*ASAASP Trigger: TGGAGAAGCTGCTGAGGCTCACAACTCAGTGGAGAG...CAGATCCAAGGGGACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038946.9 ENSMUST00000105966.2
CDS-3UTR GCA 90 bp	GGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTCCCCTTGGATCTGGTAGGCTGATGAGTGTCTaGTGTCCTGGCTGTTCCAGG	+
Preference number: 4 (lower is better) Translates to: GPKSPEHSAWGQCPLGSGRLMSV*CPGCSR Trigger: CCTGGAACAGCCAGGACAGCAGACACTCATCAGCCT...ACCAGATCCAAGGGGACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR GCA 90 bp	TCTCTCCTTCATCCTTCCTTGGGAGCTCTTGGCTCCCCTAGGGACTGGTCCCTTAGGCTGATGAGTGTCTaGTGTCCTGGCTGTTCCAGG	+
Preference number: 4 (lower is better) Translates to: SLLHPSLGALGSPRDWSLRLMSV*CPGCSR Trigger: CCTGGAACAGCCAGGACAGCAGACACTCATCAGCCT...AAGGGACCAGTCCCTAGGGGAGCCAAGAGCTCCCAAGGAAGGATGAAGGAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR GCA 90 bp	CAGGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTCCCCTTGGATCTGAGGCTGATGAGTGTCTaGTGTCCTGGCTGTTCCAGG	+
Preference number: 4 (lower is better) Translates to: QDPRVLSIQHGDSVPLDLRLMSV*CPGCSR Trigger: CCTGGAACAGCCAGGACAGCAGACACTCATCAGCCT...CAGATCCAAGGGGACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR TCA 90 bp	GGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTGTTGGAGGCAGCCTGTAGCTCAGGTTTaGCTCCTCCAAGTGGACTTT	+
Preference number: 4 (lower is better) Translates to: GGSRSKRRGYRQLGCWRQPVAQV*LLQVDF Trigger: AAAGTCCACTTGGAGGAGTCAAACCTGAGCTACAGG...CTGCCTCCAACAACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR TCA 90 bp	GAGGCTATCGGCAGCTTGGTTGTTGGAGGCAGGAGAGCAGGCCAGACTGGCAACGTCTTAGAAGCAGACTaGCTCTGCACTTCTCCTGTT	+
Preference number: 4 (lower is better) Translates to: EAIGSLVVGGRRAGQTGNVLEAD*LCTSPV Trigger: AACAGGAGAAGTGCAGAGTCAGTCTGCTTCTAAGAC...GTTGCCAGTCTGGCCTGCTCTCCTGCCTCCAACAACCAAGCTGCCGATAGCCTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS-3UTR TCA 90 bp	TCTCTCCTTCATCCTTCCTTGGGAGCTCTTGGCTCCCCTAGGGACTGGTCCCTTTCTTCTTCTCTCCACTaGGTTGTGAGCCTCAGCAGC	+
Preference number: 4 (lower is better) Translates to: SLLHPSLGALGSPRDWSLSSSLH*VVSLSS Trigger: GCTGCTGAGGCTCACAACTCAGTGGAGAGAAGAAGA...AAGGGACCAGTCCCTAGGGGAGCCAAGAGCTCCCAAGGAAGGATGAAGGAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038946.9 ENSMUST00000105966.2
CDS-3UTR CCA 90 bp	GGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTCCCCTTGGATCTGGTTCGCTGTCTTCTGCATaGAGCTCTTCCTGTTCCTCG	+
Preference number: 4 (lower is better) Translates to: GPKSPEHSAWGQCPLGSGSLSSA*SSSCSS Trigger: CGAGGAACAGGAAGAGCTCCATGCAGAAGACAGCGA...ACCAGATCCAAGGGGACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	AGCAGGCCAGACTGGCAACAGGAAGCAATTTCTTGGTCAGGGCTGGGAGTGGCATCGCTGTCTTCTGCATaGAGCTCTTCCTGTTCCTCG	+
Preference number: 4 (lower is better) Translates to: SRPDWQQEAISWSGLGVASLSSA*SSSCSS Trigger: CGAGGAACAGGAAGAGCTCCATGCAGAAGACAGCGA...TGCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTGTTGCCAGTCTGGCCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	GAGAAGATGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTGTTGAGTGTCTGCTGTCCTaGCTGTTCCAGGGAATGGCC	+
Preference number: 4 (lower is better) Translates to: EKMEGPGAKGEAIGSLVVECLLS*LFQGMA Trigger: GGCCATTCCCTGGAACAGCCAGGACAGCAGACACTC...AACAACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCATCTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	GACTGGCAACAGGAAGCAATTTCTTGGTCAGGGCTGGGAGTGGCATCCGGCCGGCCAGCTACTATATCCTaGCAGGAGGGTGTCTTAGAA	+
Preference number: 4 (lower is better) Translates to: DWQQEAISWSGLGVASGRPATIS*QEGVLE Trigger: TTCTAAGACACCCTCCTGCCAGGATATAGTAGCTGG...CCGGCCGGATGCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTGTTGCCAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS-3UTR CCA 90 bp	GGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTCCCCTTGGATCTGGTGTACCGCTTTCCAGATaGGGTGCTCTTGATGGTGGA	+
Preference number: 4 (lower is better) Translates to: GPKSPEHSAWGQCPLGSGVPLSR*GALDGG Trigger: TCCACCATCAAGAGCACCCCATCTGGAAAGCGGTAC...ACCAGATCCAAGGGGACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS-3UTR TCA 90 bp	CAGGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTCCCCTTGGATCTGCCTGTAGCTCAGGTTTaGCTCCTCCAAGTGGACTTT	+
Preference number: 4 (lower is better) Translates to: QDPRVLSIQHGDSVPLDLPVAQV*LLQVDF Trigger: AAAGTCCACTTGGAGGAGTCAAACCTGAGCTACAGG...CAGATCCAAGGGGACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR TCA 90 bp	GGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTCCCCTTGGATCTGGTCCTGTAGCTCAGGTTTaGCTCCTCCAAGTGGACTTT	+
Preference number: 4 (lower is better) Translates to: GPKSPEHSAWGQCPLGSGPVAQV*LLQVDF Trigger: AAAGTCCACTTGGAGGAGTCAAACCTGAGCTACAGG...ACCAGATCCAAGGGGACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR TCA 90 bp	AAAAGGAGAGGCTATCGGCAGCTTGGTTGTTGGAGGCAGGAGAGCAGGCCAGACCCTGTAGCTCAGGTTTaGCTCCTCCAAGTGGACTTT	+
Preference number: 4 (lower is better) Translates to: KRRGYRQLGCWRQESRPDPVAQV*LLQVDF Trigger: AAAGTCCACTTGGAGGAGTCAAACCTGAGCTACAGG...GTCTGGCCTGCTCTCCTGCCTCCAACAACCAAGCTGCCGATAGCCTCTCCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR TCA 90 bp	GGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTGTTGGAGGCAGATGGGCAAGGTTGGTTaGGACTTCTTCACACTGTTG	+
Preference number: 4 (lower is better) Translates to: GGSRSKRRGYRQLGCWRQMGKVG*DFFTLL Trigger: CAACAGTGTGAAGAAGTCTCAACCAACCTTGCCCAT...CTGCCTCCAACAACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR TCA 90 bp	GGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTGTTGGAGGCAGGTCTTAGAAGCAGACTaGCTCTGCACTTCTCCTGTT	+
Preference number: 4 (lower is better) Translates to: GGSRSKRRGYRQLGCWRQVLEAD*LCTSPV Trigger: AACAGGAGAAGTGCAGAGTCAGTCTGCTTCTAAGAC...CTGCCTCCAACAACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS-3UTR CCA 90 bp	TCCGTAAACAGGGCAGGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTTCGCTGTCTTCTGCATaGAGCTCTTCCTGTTCCTCG	+
Preference number: 4 (lower is better) Translates to: SVNRAGPKSPEHSAWGQCSLSSA*SSSCSS Trigger: CGAGGAACAGGAAGAGCTCCATGCAGAAGACAGCGA...ACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCCTGCCCTGTTTACGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	GGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTGTTGGAGGCAGGAGGGCTGTTCCAGGGAATaGCCACCATCATCTTCTTTA	+
Preference number: 4 (lower is better) Translates to: GSRSKRRGYRQLGCWRQEGCSRE*PPSSSL Trigger: TAAAGAAGATGATGGTGGCCATTCCCTGGAACAGCC...CTCCTGCCTCCAACAACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	GCAACAGGAAGCAATTTCTTGGTCAGGGCTGGGAGTGGCATCCGGCCGGAGTCTTGTTTGTTTCTCCTCTaGTCTCTCGCTTTGAGAGGG	+
Preference number: 4 (lower is better) Translates to: ATGSNFLVRAGSGIRPESCLFLL*SLALRG Trigger: CCCTCTCAAAGCGAGAGACCAGAGGAGAAACAAACA...AGACTCCGGCCGGATGCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTGTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8
CDS-3UTR CCA 90 bp	AACAGGAAGCAATTTCTTGGTCAGGGCTGGGAGTGGCATCCGGCCGGAGTCAGGTGTTTGTTTCTCCTCTaGTCTCTCGCTTTGAGAGGG	+
Preference number: 4 (lower is better) Translates to: NRKQFLGQGWEWHPAGVRCLFLL*SLALRG Trigger: CCCTCTCAAAGCGAGAGACCAGAGGAGAAACAAACA...CCTGACTCCGGCCGGATGCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	GAGGCTATCGGCAGCTTGGTTGTTGGAGGCAGGAGAGCAGGCCAGACTGGCAACGGCGTTCATCAATTGTaGAAATGGGCAAGGTTGGTT	+
Preference number: 4 (lower is better) Translates to: EAIGSLVVGGRRAGQTGNGVHQL*KWARLV Trigger: AACCAACCTTGCCCATTTCCACAATTGATGAACGCC...GTTGCCAGTCTGGCCTGCTCTCCTGCCTCCAACAACCAAGCTGCCGATAGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	AGCAGGCCAGACTGGCAACAGGAAGCAATTTCTTGGTCAGGGCTGGGAGTGGCATTTCCCAAAGAGTCTTaGTACTGGCTACGGCCATGC	+
Preference number: 4 (lower is better) Translates to: SRPDWQQEAISWSGLGVAFPKES*YWLRPC Trigger: GCATGGCCGTAGCCAGTACCAAGACTCTTTGGGAAA...TGCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTGTTGCCAGTCTGGCCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	GGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTGTTGGAGGCAGCCAGCTACTATATCCTaGCAGGAGGGTGTCTTAGAA	+
Preference number: 4 (lower is better) Translates to: GGSRSKRRGYRQLGCWRQPATIS*QEGVLE Trigger: TTCTAAGACACCCTCCTGCCAGGATATAGTAGCTGG...CTGCCTCCAACAACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS-3UTR TCA 90 bp	AGCAGGCCAGACTGGCAACAGGAAGCAATTTCTTGGTCAGGGCTGGGAGTGGCAATGGGCAAGGTTGGTTaGGACTTCTTCACACTGTTG	+
Preference number: 4 (lower is better) Translates to: SRPDWQQEAISWSGLGVAMGKVG*DFFTLL Trigger: CAACAGTGTGAAGAAGTCTCAACCAACCTTGCCCAT...TGCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTGTTGCCAGTCTGGCCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR TCA 90 bp	TCCTTCATCCTTCCTTGGGAGCTCTTGGCTCCCCTAGGGACTGGTCCCTTTAGCATGGGCAAGGTTGGTTaGGACTTCTTCACACTGTTG	+
Preference number: 4 (lower is better) Translates to: SFILPWELLAPLGTGPFSMGKVG*DFFTLL Trigger: CAACAGTGTGAAGAAGTCTCAACCAACCTTGCCCAT...GCTAAAGGGACCAGTCCCTAGGGGAGCCAAGAGCTCCCAAGGAAGGATGAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR TCA 90 bp	TCTCTCCTTCATCCTTCCTTGGGAGCTCTTGGCTCCCCTAGGGACTGGTCCCTTATGGGCAAGGTTGGTTaGGACTTCTTCACACTGTTG	+
Preference number: 4 (lower is better) Translates to: SLLHPSLGALGSPRDWSLMGKVG*DFFTLL Trigger: CAACAGTGTGAAGAAGTCTCAACCAACCTTGCCCAT...AAGGGACCAGTCCCTAGGGGAGCCAAGAGCTCCCAAGGAAGGATGAAGGAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR TCA 90 bp	GCAGGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTCCCCTTGGATCTGTCTTAGAAGCAGACTaGCTCTGCACTTCTCCTGTT	+
Preference number: 4 (lower is better) Translates to: AGPKSPEHSAWGQCPLGSVLEAD*LCTSPV Trigger: AACAGGAGAAGTGCAGAGTCAGTCTGCTTCTAAGAC...AGATCCAAGGGGACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS-3UTR CCA 90 bp	TGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTGTTGGAGGCATGTTTGTTTCTCCTCTaGTCTCTCGCTTTGAGAGGG	+
Preference number: 4 (lower is better) Translates to: WRVQEQKERLSAAWLLEACLFLL*SLALRG Trigger: CCCTCTCAAAGCGAGAGACCAGAGGAGAAACAAACA...TGCCTCCAACAACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	AGGGAAGAGAAGATGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGTTTCCCAAAGAGTCTTaGTACTGGCTACGGCCATGC	+
Preference number: 4 (lower is better) Translates to: REEKMEGPGAKGEAIGSLFPKES*YWLRPC Trigger: GCATGGCCGTAGCCAGTACCAAGACTCTTTGGGAAA...CAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCATCTTCTCTTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	TCTCTCCTTCATCCTTCCTTGGGAGCTCTTGGCTCCCCTAGGGACTGGTCCCTTCCAGCTACTATATCCTaGCAGGAGGGTGTCTTAGAA	+
Preference number: 4 (lower is better) Translates to: SLLHPSLGALGSPRDWSLPATIS*QEGVLE Trigger: TTCTAAGACACCCTCCTGCCAGGATATAGTAGCTGG...AAGGGACCAGTCCCTAGGGGAGCCAAGAGCTCCCAAGGAAGGATGAAGGAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS-3UTR CCA 90 bp	TGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTGTTGGAGGCACCAGCTACTATATCCTaGCAGGAGGGTGTCTTAGAA	+
Preference number: 4 (lower is better) Translates to: WRVQEQKERLSAAWLLEAPATIS*QEGVLE Trigger: TTCTAAGACACCCTCCTGCCAGGATATAGTAGCTGG...TGCCTCCAACAACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS-3UTR CCA 90 bp	GAAGAGAAGATGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTGTACCGCTTTCCAGATaGGGTGCTCTTGATGGTGGA	+
Preference number: 4 (lower is better) Translates to: EEKMEGPGAKGEAIGSLVVPLSR*GALDGG Trigger: TCCACCATCAAGAGCACCCCATCTGGAAAGCGGTAC...AACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCATCTTCTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS-3UTR TCA 90 bp	AAGATGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTGTTGGACCTGTAGCTCAGGTTTaGCTCCTCCAAGTGGACTTT	+
Preference number: 4 (lower is better) Translates to: KMEGPGAKGEAIGSLVVGPVAQV*LLQVDF Trigger: AAAGTCCACTTGGAGGAGTCAAACCTGAGCTACAGG...TCCAACAACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCATCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR TCA 90 bp	GCTGATGGTGAGAAGCAGAGTTGGAGGGTTGGTCAAAGGATGAGAGGGAAGAGATCTTCTTCTCTCCACTaGGTTGTGAGCCTCAGCAGC	+
Preference number: 4 (lower is better) Translates to: ADGEKQSWRVGQRMRGKRSSSLH*VVSLSS Trigger: GCTGCTGAGGCTCACAACTCAGTGGAGAGAAGAAGA...TCTCTTCCCTCTCATCCTTTGACCAACCCTCCAACTCTGCTTCTCACCATCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038946.9 ENSMUST00000105966.2
CDS-3UTR GCA 90 bp	ACACAAAATGAGGGATCCGTAAACAGGGCAGGACCCAAGAGTCCTGAGCATTCAAGGCTGATGAGTGTCTaGTGTCCTGGCTGTTCCAGG	+
Preference number: 4 (lower is better) Translates to: TQNEGSVNRAGPKSPEHSRLMSV*CPGCSR Trigger: CCTGGAACAGCCAGGACAGCAGACACTCATCAGCCT...TGAATGCTCAGGACTCTTGGGTCCTGCCCTGTTTACGGATCCCTCATTTTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	TCTCTCCTTCATCCTTCCTTGGGAGCTCTTGGCTCCCCTAGGGACTGGTCCCTTTCTTTATCTTTGTCCTaGTCCTGTAGCTGCCTCTCT	+
Preference number: 4 (lower is better) Translates to: SLLHPSLGALGSPRDWSLSLSLS*SCSCLS Trigger: AGAGAGGCAGCTACAGGACCAGGACAAAGATAAAGA...AAGGGACCAGTCCCTAGGGGAGCCAAGAGCTCCCAAGGAAGGATGAAGGAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	TCCGTAAACAGGGCAGGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTGGCTGTTCCAGGGAATaGCCACCATCATCTTCTTTA	+
Preference number: 4 (lower is better) Translates to: SVNRAGPKSPEHSAWGQCGCSRE*PPSSSL Trigger: TAAAGAAGATGATGGTGGCCATTCCCTGGAACAGCC...ACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCCTGCCCTGTTTACGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	ACAGGGCAGGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTCCCCTTGCATCAATTGTGGAAATaGGCAAGGTTGGTTGAGACT	+
Preference number: 4 (lower is better) Translates to: TGQDPRVLSIQHGDSVPLHQLWK*ARLVET Trigger: AGTCTCAACCAACCTTGCCCATTTCCACAATTGATG...CAAGGGGACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCCTGCCCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	AAAAGGAGAGGCTATCGGCAGCTTGGTTGTTGGAGGCAGGAGAGCAGGCCAGACGGCGTTCATCAATTGTaGAAATGGGCAAGGTTGGTT	+
Preference number: 4 (lower is better) Translates to: KRRGYRQLGCWRQESRPDGVHQL*KWARLV Trigger: AACCAACCTTGCCCATTTCCACAATTGATGAACGCC...GTCTGGCCTGCTCTCCTGCCTCCAACAACCAAGCTGCCGATAGCCTCTCCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	GAGAAGATGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTGTTTTTCCCAAAGAGTCTTaGTACTGGCTACGGCCATGC	+
Preference number: 4 (lower is better) Translates to: EKMEGPGAKGEAIGSLVVFPKES*YWLRPC Trigger: GCATGGCCGTAGCCAGTACCAAGACTCTTTGGGAAA...AACAACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCATCTTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	GCTGATGGTGAGAAGCAGAGTTGGAGGGTTGGTCAAAGGATGAGAGGGAAGAGAGTACCGCTTTCCAGATaGGGTGCTCTTGATGGTGGA	+
Preference number: 4 (lower is better) Translates to: ADGEKQSWRVGQRMRGKRVPLSR*GALDGG Trigger: TCCACCATCAAGAGCACCCCATCTGGAAAGCGGTAC...TCTCTTCCCTCTCATCCTTTGACCAACCCTCCAACTCTGCTTCTCACCATCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS-3UTR TCA 90 bp	GAGAAGATGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTGTTGTCTTAGAAGCAGACTaGCTCTGCACTTCTCCTGTT	+
Preference number: 4 (lower is better) Translates to: EKMEGPGAKGEAIGSLVVVLEAD*LCTSPV Trigger: AACAGGAGAAGTGCAGAGTCAGTCTGCTTCTAAGAC...AACAACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCATCTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS-3UTR CCA 90 bp	TTTATTACACAAAATGAGGGATCCGTAAACAGGGCAGGACCCAAGAGTCCTGAGGAGTGTCTGCTGTCCTaGCTGTTCCAGGGAATGGCC	+
Preference number: 4 (lower is better) Translates to: FITQNEGSVNRAGPKSPEECLLS*LFQGMA Trigger: GGCCATTCCCTGGAACAGCCAGGACAGCAGACACTC...CTCAGGACTCTTGGGTCCTGCCCTGTTTACGGATCCCTCATTTTGTGTAATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	AGCAGGCCAGACTGGCAACAGGAAGCAATTTCTTGGTCAGGGCTGGGAGTGGCACATCAATTGTGGAAATaGGCAAGGTTGGTTGAGACT	+
Preference number: 4 (lower is better) Translates to: SRPDWQQEAISWSGLGVAHQLWK*ARLVET Trigger: AGTCTCAACCAACCTTGCCCATTTCCACAATTGATG...TGCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTGTTGCCAGTCTGGCCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	GAGGGAAGAGAAGATGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGCGTTCATCAATTGTaGAAATGGGCAAGGTTGGTT	+
Preference number: 4 (lower is better) Translates to: EGREDGGSRSKRRGYRQLGVHQL*KWARLV Trigger: AACCAACCTTGCCCATTTCCACAATTGATGAACGCC...AAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCATCTTCTCTTCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	GAGAAGATGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTGTTCCAGCTACTATATCCTaGCAGGAGGGTGTCTTAGAA	+
Preference number: 4 (lower is better) Translates to: EKMEGPGAKGEAIGSLVVPATIS*QEGVLE Trigger: TTCTAAGACACCCTCCTGCCAGGATATAGTAGCTGG...AACAACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCATCTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS-3UTR CCA 90 bp	ACAGAGCTGATCAAGTCTCAAGTGGCCAACAGATATGGCCCTTTCTGTTTTGATGAGTGTCTGCTGTCCTaGCTGTTCCAGGGAATGGCC	+
Preference number: 4 (lower is better) Translates to: TELIKSQVANRYGPFCFDECLLS*LFQGMA Trigger: GGCCATTCCCTGGAACAGCCAGGACAGCAGACACTC...ATCAAAACAGAAAGGGCCATATCTGTTGGCCACTTGAGACTTGATCAGCTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	AAGATGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTGTTGGAGGCGTTCATCAATTGTaGAAATGGGCAAGGTTGGTT	+
Preference number: 4 (lower is better) Translates to: KMEGPGAKGEAIGSLVVGGVHQL*KWARLV Trigger: AACCAACCTTGCCCATTTCCACAATTGATGAACGCC...TCCAACAACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	ATTACACAAAATGAGGGATCCGTAAACAGGGCAGGACCCAAGAGTCCTGAGCATGTACCGCTTTCCAGATaGGGTGCTCTTGATGGTGGA	+
Preference number: 4 (lower is better) Translates to: ITQNEGSVNRAGPKSPEHVPLSR*GALDGG Trigger: TCCACCATCAAGAGCACCCCATCTGGAAAGCGGTAC...ATGCTCAGGACTCTTGGGTCCTGCCCTGTTTACGGATCCCTCATTTTGTGTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS-3UTR TCA 90 bp	GCCCACAGAGCTGATCAAGTCTCAAGTGGCCAACAGATATGGCCCTTTCTGTTTGTCTTAGAAGCAGACTaGCTCTGCACTTCTCCTGTT	+
Preference number: 4 (lower is better) Translates to: AHRADQVSSGQQIWPFLFVLEAD*LCTSPV Trigger: AACAGGAGAAGTGCAGAGTCAGTCTGCTTCTAAGAC...AAACAGAAAGGGCCATATCTGTTGGCCACTTGAGACTTGATCAGCTCTGTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS-3UTR CCA 90 bp	ACACAAAATGAGGGATCCGTAAACAGGGCAGGACCCAAGAGTCCTGAGCATTCAGGCTGTTCCAGGGAATaGCCACCATCATCTTCTTTA	+
Preference number: 4 (lower is better) Translates to: TQNEGSVNRAGPKSPEHSGCSRE*PPSSSL Trigger: TAAAGAAGATGATGGTGGCCATTCCCTGGAACAGCC...TGAATGCTCAGGACTCTTGGGTCCTGCCCTGTTTACGGATCCCTCATTTTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	GAGAAGATGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTGTTCATCAATTGTGGAAATaGGCAAGGTTGGTTGAGACT	+
Preference number: 4 (lower is better) Translates to: EKMEGPGAKGEAIGSLVVHQLWK*ARLVET Trigger: AGTCTCAACCAACCTTGCCCATTTCCACAATTGATG...AACAACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCATCTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	TCAAGTCTCAAGTGGCCAACAGATATGGCCCTTTCTGTTTTGATCACCGTGTTCGTACCGCTTTCCAGATaGGGTGCTCTTGATGGTGGA	+
Preference number: 4 (lower is better) Translates to: SSLKWPTDMALSVLITVFVPLSR*GALDGG Trigger: TCCACCATCAAGAGCACCCCATCTGGAAAGCGGTAC...GAACACGGTGATCAAAACAGAAAGGGCCATATCTGTTGGCCACTTGAGACTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS-3UTR CCA 90 bp	AGGAGATCCAAATGCATAGGGGACACTCAATGCACTTTATTACACAAAATGAGGGAGTGTCTGCTGTCCTaGCTGTTCCAGGGAATGGCC	+
Preference number: 4 (lower is better) Translates to: RRSKCIGDTQCTLLHKMRECLLS*LFQGMA Trigger: GGCCATTCCCTGGAACAGCCAGGACAGCAGACACTC...CCTCATTTTGTGTAATAAAGTGCATTGAGTGTCCCCTATGCATTTGGATCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	CAAAATGAGGGATCCGTAAACAGGGCAGGACCCAAGAGTCCTGAGCATTCAGCACATCAATTGTGGAAATaGGCAAGGTTGGTTGAGACT	+
Preference number: 4 (lower is better) Translates to: QNEGSVNRAGPKSPEHSAHQLWK*ARLVET Trigger: AGTCTCAACCAACCTTGCCCATTTCCACAATTGATG...TGCTGAATGCTCAGGACTCTTGGGTCCTGCCCTGTTTACGGATCCCTCATTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	CTGGTCCCTTTAGCTGATGGTGAGAAGCAGAGTTGGAGGGTTGGTCAAAGGATGCATCAATTGTGGAAATaGGCAAGGTTGGTTGAGACT	+
Preference number: 4 (lower is better) Translates to: LVPLADGEKQSWRVGQRMHQLWK*ARLVET Trigger: AGTCTCAACCAACCTTGCCCATTTCCACAATTGATG...CATCCTTTGACCAACCCTCCAACTCTGCTTCTCACCATCAGCTAAAGGGACCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	ATTACACAAAATGAGGGATCCGTAAACAGGGCAGGACCCAAGAGTCCTGAGCATTCTTTATCTTTGTCCTaGTCCTGTAGCTGCCTCTCT	+
Preference number: 4 (lower is better) Translates to: ITQNEGSVNRAGPKSPEHSLSLS*SCSCLS Trigger: AGAGAGGCAGCTACAGGACCAGGACAAAGATAAAGA...ATGCTCAGGACTCTTGGGTCCTGCCCTGTTTACGGATCCCTCATTTTGTGTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	TACCTCAGATCCTGGAACATAACACACTGCAAGGCCAAAAGACAAGACAGAGTGTGTTTGTTTCTCCTCTaGTCTCTCGCTTTGAGAGGG	+
Preference number: 4 (lower is better) Translates to: YLRSWNITHCKAKRQDRVCLFLL*SLALRG Trigger: CCCTCTCAAAGCGAGAGACCAGAGGAGAAACAAACA...CACTCTGTCTTGTCTTTTGGCCTTGCAGTGTGTTATGTTCCAGGATCTGAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	ATTACACAAAATGAGGGATCCGTAAACAGGGCAGGACCCAAGAGTCCTGAGCATGGCGTTCATCAATTGTaGAAATGGGCAAGGTTGGTT	+
Preference number: 4 (lower is better) Translates to: ITQNEGSVNRAGPKSPEHGVHQL*KWARLV Trigger: AACCAACCTTGCCCATTTCCACAATTGATGAACGCC...ATGCTCAGGACTCTTGGGTCCTGCCCTGTTTACGGATCCCTCATTTTGTGTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	TCAATGCACTTTATTACACAAAATGAGGGATCCGTAAACAGGGCAGGACCCAAGTTTCCCAAAGAGTCTTaGTACTGGCTACGGCCATGC	+
Preference number: 4 (lower is better) Translates to: SMHFITQNEGSVNRAGPKFPKES*YWLRPC Trigger: GCATGGCCGTAGCCAGTACCAAGACTCTTTGGGAAA...CTTGGGTCCTGCCCTGTTTACGGATCCCTCATTTTGTGTAATAAAGTGCATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	GAGCACAGGAGATCCAAATGCATAGGGGACACTCAATGCACTTTATTACACAAAGTACCGCTTTCCAGATaGGGTGCTCTTGATGGTGGA	+
Preference number: 4 (lower is better) Translates to: EHRRSKCIGDTQCTLLHKVPLSR*GALDGG Trigger: TCCACCATCAAGAGCACCCCATCTGGAAAGCGGTAC...TTTGTGTAATAAAGTGCATTGAGTGTCCCCTATGCATTTGGATCTCCTGTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS-3UTR CCA 90 bp	ACAGAGCTGATCAAGTCTCAAGTGGCCAACAGATATGGCCCTTTCTGTTTTGATGGCTGTTCCAGGGAATaGCCACCATCATCTTCTTTA	+
Preference number: 4 (lower is better) Translates to: TELIKSQVANRYGPFCFDGCSRE*PPSSSL Trigger: TAAAGAAGATGATGGTGGCCATTCCCTGGAACAGCC...ATCAAAACAGAAAGGGCCATATCTGTTGGCCACTTGAGACTTGATCAGCTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8
CDS-3UTR CCA 90 bp	CATAGGGGACACTCAATGCACTTTATTACACAAAATGAGGGATCCGTAAACAGGTTTCCCAAAGAGTCTTaGTACTGGCTACGGCCATGC	+
Preference number: 4 (lower is better) Translates to: HRGHSMHFITQNEGSVNRFPKES*YWLRPC Trigger: GCATGGCCGTAGCCAGTACCAAGACTCTTTGGGAAA...CCTGTTTACGGATCCCTCATTTTGTGTAATAAAGTGCATTGAGTGTCCCCTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR TCA 90 bp	ATCCAAATGCATAGGGGACACTCAATGCACTTTATTACACAAAATGAGGGATCCATGGGCAAGGTTGGTTaGGACTTCTTCACACTGTTG	+
Preference number: 4 (lower is better) Translates to: IQMHRGHSMHFITQNEGSMGKVG*DFFTLL Trigger: CAACAGTGTGAAGAAGTCTCAACCAACCTTGCCCAT...GGATCCCTCATTTTGTGTAATAAAGTGCATTGAGTGTCCCCTATGCATTTGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	TCCTTCATCCTTCCTTGGGAGCTCTTGGCTCCCCTAGGGACTGGTCCCTTTAGCCCTCTCTCGCTCCCGTaGACGCTGCTCACGGGCAGC	+
Preference number: 5 (lower is better) Translates to: SFILPWELLAPLGTGPFSPLSLP*TLLTGS Trigger: GCTGCCCGTGAGCAGCGTCAACGGGAGCGAGAGAGG...GCTAAAGGGACCAGTCCCTAGGGGAGCCAAGAGCTCCCAAGGAAGGATGAAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	GAGGCTATCGGCAGCTTGGTTGTTGGAGGCAGGAGAGCAGGCCAGACTGGCAACGTCCTATCAGCCAGTTaGGTGGTAGGGCTCAGGGGA	+
Preference number: 5 (lower is better) Translates to: EAIGSLVVGGRRAGQTGNVLSAS*VVGLRG Trigger: TCCCCTGAGCCCTACCACCAAACTGGCTGATAGGAC...GTTGCCAGTCTGGCCTGCTCTCCTGCCTCCAACAACCAAGCTGCCGATAGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	GGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTCCCCTTGGATCTGGTCCGTGGCTCCGGCTTTaGGGACCAGTCACCAAAACC	+
Preference number: 5 (lower is better) Translates to: GPKSPEHSAWGQCPLGSGPWLRL*GPVTKT Trigger: GGTTTTGGTGACTGGTCCCAAAAGCCGGAGCCACGG...ACCAGATCCAAGGGGACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	AGCAGGCCAGACTGGCAACAGGAAGCAATTTCTTGGTCAGGGCTGGGAGTGGCACCGTGGCTCCGGCTTTaGGGACCAGTCACCAAAACC	+
Preference number: 5 (lower is better) Translates to: SRPDWQQEAISWSGLGVAPWLRL*GPVTKT Trigger: GGTTTTGGTGACTGGTCCCAAAAGCCGGAGCCACGG...TGCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTGTTGCCAGTCTGGCCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	GCAACAGGAAGCAATTTCTTGGTCAGGGCTGGGAGTGGCATCCGGCCGGAGTCTGTCCTATCAGCCAGTTaGGTGGTAGGGCTCAGGGGA	+
Preference number: 5 (lower is better) Translates to: ATGSNFLVRAGSGIRPESVLSAS*VVGLRG Trigger: TCCCCTGAGCCCTACCACCAAACTGGCTGATAGGAC...AGACTCCGGCCGGATGCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTGTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8
CDS-3UTR CAA 90 bp	GGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTGTTGGAGGCAGGAGGTCCTATCAGCCAGTTaGGTGGTAGGGCTCAGGGGA	+
Preference number: 5 (lower is better) Translates to: GSRSKRRGYRQLGCWRQEVLSAS*VVGLRG Trigger: TCCCCTGAGCCCTACCACCAAACTGGCTGATAGGAC...CTCCTGCCTCCAACAACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	ACACAAAATGAGGGATCCGTAAACAGGGCAGGACCCAAGAGTCCTGAGCATTCACCTCTCTCGCTCCCGTaGACGCTGCTCACGGGCAGC	+
Preference number: 5 (lower is better) Translates to: TQNEGSVNRAGPKSPEHSPLSLP*TLLTGS Trigger: GCTGCCCGTGAGCAGCGTCAACGGGAGCGAGAGAGG...TGAATGCTCAGGACTCTTGGGTCCTGCCCTGTTTACGGATCCCTCATTTTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	GACTGGCAACAGGAAGCAATTTCTTGGTCAGGGCTGGGAGTGGCATCCGGCCGGCCCTGTAGCTCAGGTTaGACTCCTCCAAGTGGACTT	+
Preference number: 5 (lower is better) Translates to: DWQQEAISWSGLGVASGRPCSSG*TPPSGL Trigger: AAGTCCACTTGGAGGAGTCAAACCTGAGCTACAGGG...CCGGCCGGATGCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTGTTGCCAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	GAGGCTATCGGCAGCTTGGTTGTTGGAGGCAGGAGAGCAGGCCAGACTGGCAACCCCTGTAGCTCAGGTTaGACTCCTCCAAGTGGACTT	+
Preference number: 5 (lower is better) Translates to: EAIGSLVVGGRRAGQTGNPCSSG*TPPSGL Trigger: AAGTCCACTTGGAGGAGTCAAACCTGAGCTACAGGG...GTTGCCAGTCTGGCCTGCTCTCCTGCCTCCAACAACCAAGCTGCCGATAGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	GGCAACAGGAAGCAATTTCTTGGTCAGGGCTGGGAGTGGCATCCGGCCGGAGTCATGGTGGATGAGATCTaGGAGCCTCCTTTCTGCTCC	+
Preference number: 5 (lower is better) Translates to: GNRKQFLGQGWEWHPAGVMVDEI*EPPFCS Trigger: GGAGCAGAAAGGAGGCTCCAAGATCTCATCCACCAT...GACTCCGGCCGGATGCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTGTTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS-3UTR CAA 90 bp	GAGAAGATGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTGTTCCGTGGCTCCGGCTTTaGGGACCAGTCACCAAAACC	+
Preference number: 5 (lower is better) Translates to: EKMEGPGAKGEAIGSLVVPWLRL*GPVTKT Trigger: GGTTTTGGTGACTGGTCCCAAAAGCCGGAGCCACGG...AACAACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCATCTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	GAAGAGAAGATGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTCCGTGGCTCCGGCTTTaGGGACCAGTCACCAAAACC	+
Preference number: 5 (lower is better) Translates to: EEKMEGPGAKGEAIGSLVPWLRL*GPVTKT Trigger: GGTTTTGGTGACTGGTCCCAAAAGCCGGAGCCACGG...AACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCATCTTCTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	TCCGTAAACAGGGCAGGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTGTCCTATCAGCCAGTTaGGTGGTAGGGCTCAGGGGA	+
Preference number: 5 (lower is better) Translates to: SVNRAGPKSPEHSAWGQCVLSAS*VVGLRG Trigger: TCCCCTGAGCCCTACCACCAAACTGGCTGATAGGAC...ACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCCTGCCCTGTTTACGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	GAGGCTATCGGCAGCTTGGTTGTTGGAGGCAGGAGAGCAGGCCAGACTGGCAACGCAGGCGTTCATCAATaGTGGAAATGGGCAAGGTTG	+
Preference number: 5 (lower is better) Translates to: EAIGSLVVGGRRAGQTGNAGVHQ*WKWARL Trigger: CAACCTTGCCCATTTCCACAATTGATGAACGCCTGC...GTTGCCAGTCTGGCCTGCTCTCCTGCCTCCAACAACCAAGCTGCCGATAGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	ACAGGGCAGGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTCCCCTTGGTTTCCCAAAGAGTCTaGGTACTGGCTACGGCCATG	+
Preference number: 5 (lower is better) Translates to: TGQDPRVLSIQHGDSVPLVSQRV*VLATAM Trigger: CATGGCCGTAGCCAGTACCAAGACTCTTTGGGAAAC...CAAGGGGACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCCTGCCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	GGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTGTTGGAGGCAGGAGGTTTCCCAAAGAGTCTaGGTACTGGCTACGGCCATG	+
Preference number: 5 (lower is better) Translates to: GSRSKRRGYRQLGCWRQEVSQRV*VLATAM Trigger: CATGGCCGTAGCCAGTACCAAGACTCTTTGGGAAAC...CTCCTGCCTCCAACAACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	AGACTGGCAACAGGAAGCAATTTCTTGGTCAGGGCTGGGAGTGGCATCCGGCCGCCAGATGGGGTGCTCTaGATGGTGGATGAGATCTTG	+
Preference number: 5 (lower is better) Translates to: RLATGSNFLVRAGSGIRPPDGVL*MVDEIL Trigger: CAAGATCTCATCCACCATCAAGAGCACCCCATCTGG...CGGCCGGATGCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTGTTGCCAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS TCA 90 bp	ACCCCCAACAGCATCCTCTGGATCGGGCTCCCTGTAGCTCAGGTTTaGCTCCTCCAAGTGGACTTTGGCTTGGTGAGAACTCTCCTCTGT	+
Preference number: 5 (lower is better) Translates to: TPNSILWIGLPVAQV*LLQVDFGLVRTLLC Trigger: ACAGAGGAGAGTTCTCACCAAGCCAAAGTCCACTTGGAGGAGTCAAACCTGAGCTACAGGGAGCCCGATCCAGAGGATGCTGTTGGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	TACCTCAGATCCTGGAACATAACACACTGCAAGGCCAAAAGACAAGACAGAGTGCCTCTCTCGCTCCCGTaGACGCTGCTCACGGGCAGC	+
Preference number: 5 (lower is better) Translates to: YLRSWNITHCKAKRQDRVPLSLP*TLLTGS Trigger: GCTGCCCGTGAGCAGCGTCAACGGGAGCGAGAGAGG...CACTCTGTCTTGTCTTTTGGCCTTGCAGTGTGTTATGTTCCAGGATCTGAGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	TTTATTACACAAAATGAGGGATCCGTAAACAGGGCAGGACCCAAGAGTCCTGAGCCTCTCTCGCTCCCGTaGACGCTGCTCACGGGCAGC	+
Preference number: 5 (lower is better) Translates to: FITQNEGSVNRAGPKSPEPLSLP*TLLTGS Trigger: GCTGCCCGTGAGCAGCGTCAACGGGAGCGAGAGAGG...CTCAGGACTCTTGGGTCCTGCCCTGTTTACGGATCCCTCATTTTGTGTAATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	TCAAGTCTCAAGTGGCCAACAGATATGGCCCTTTCTGTTTTGATCACCGTGTTCCCTCTCTCGCTCCCGTaGACGCTGCTCACGGGCAGC	+
Preference number: 5 (lower is better) Translates to: SSLKWPTDMALSVLITVFPLSLP*TLLTGS Trigger: GCTGCCCGTGAGCAGCGTCAACGGGAGCGAGAGAGG...GAACACGGTGATCAAAACAGAAAGGGCCATATCTGTTGGCCACTTGAGACTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	AGCAGGCCAGACTGGCAACAGGAAGCAATTTCTTGGTCAGGGCTGGGAGTGGCACCCTGTAGCTCAGGTTaGACTCCTCCAAGTGGACTT	+
Preference number: 5 (lower is better) Translates to: SRPDWQQEAISWSGLGVAPCSSG*TPPSGL Trigger: AAGTCCACTTGGAGGAGTCAAACCTGAGCTACAGGG...TGCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTGTTGCCAGTCTGGCCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	TCCTTCATCCTTCCTTGGGAGCTCTTGGCTCCCCTAGGGACTGGTCCCTTTAGCCCCTGTAGCTCAGGTTaGACTCCTCCAAGTGGACTT	+
Preference number: 5 (lower is better) Translates to: SFILPWELLAPLGTGPFSPCSSG*TPPSGL Trigger: AAGTCCACTTGGAGGAGTCAAACCTGAGCTACAGGG...GCTAAAGGGACCAGTCCCTAGGGGAGCCAAGAGCTCCCAAGGAAGGATGAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	GAAGAGAAGATGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTGTCCTATCAGCCAGTTaGGTGGTAGGGCTCAGGGGA	+
Preference number: 5 (lower is better) Translates to: EEKMEGPGAKGEAIGSLVVLSAS*VVGLRG Trigger: TCCCCTGAGCCCTACCACCAAACTGGCTGATAGGAC...AACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCATCTTCTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	ACAGGGCAGGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTCCCCTTGGCAGGCGTTCATCAATaGTGGAAATGGGCAAGGTTG	+
Preference number: 5 (lower is better) Translates to: TGQDPRVLSIQHGDSVPLAGVHQ*WKWARL Trigger: CAACCTTGCCCATTTCCACAATTGATGAACGCCTGC...CAAGGGGACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCCTGCCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	GCAGGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTCCCCTTGGATCTATGGTGGATGAGATCTaGGAGCCTCCTTTCTGCTCC	+
Preference number: 5 (lower is better) Translates to: AGPKSPEHSAWGQCPLGSMVDEI*EPPFCS Trigger: GGAGCAGAAAGGAGGCTCCAAGATCTCATCCACCAT...AGATCCAAGGGGACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS-3UTR CAA 90 bp	AGCAGGCCAGACTGGCAACAGGAAGCAATTTCTTGGTCAGGGCTGGGAGTGGCAATGGTGGATGAGATCTaGGAGCCTCCTTTCTGCTCC	+
Preference number: 5 (lower is better) Translates to: SRPDWQQEAISWSGLGVAMVDEI*EPPFCS Trigger: GGAGCAGAAAGGAGGCTCCAAGATCTCATCCACCAT...TGCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTGTTGCCAGTCTGGCCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS-3UTR CAA 90 bp	GGGAAGAGAAGATGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGCCAGATGGGGTGCTCTaGATGGTGGATGAGATCTTG	+
Preference number: 5 (lower is better) Translates to: GKRRWRVQEQKERLSAAWPDGVL*MVDEIL Trigger: CAAGATCTCATCCACCATCAAGAGCACCCCATCTGG...CCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCATCTTCTCTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS-3UTR CAA 90 bp	AAAAGGAGAGGCTATCGGCAGCTTGGTTGTTGGAGGCAGGAGAGCAGGCCAGACCCAGATGGGGTGCTCTaGATGGTGGATGAGATCTTG	+
Preference number: 5 (lower is better) Translates to: KRRGYRQLGCWRQESRPDPDGVL*MVDEIL Trigger: CAAGATCTCATCCACCATCAAGAGCACCCCATCTGG...GTCTGGCCTGCTCTCCTGCCTCCAACAACCAAGCTGCCGATAGCCTCTCCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS-3UTR CAA 90 bp	GCAGGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTCCCCTTGGATCTCCAGATGGGGTGCTCTaGATGGTGGATGAGATCTTG	+
Preference number: 5 (lower is better) Translates to: AGPKSPEHSAWGQCPLGSPDGVL*MVDEIL Trigger: CAAGATCTCATCCACCATCAAGAGCACCCCATCTGG...AGATCCAAGGGGACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS-3UTR CAA 90 bp	GGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTCCCCTTGGATCTGGTCAAGTGGACTTTGGCTaGGTGAGAACTCTCCTCTGT	+
Preference number: 5 (lower is better) Translates to: GPKSPEHSAWGQCPLGSGQVDFG*VRTLLC Trigger: ACAGAGGAGAGTTCTCACCAAGCCAAAGTCCACTTG...ACCAGATCCAAGGGGACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	TCCTTCATCCTTCCTTGGGAGCTCTTGGCTCCCCTAGGGACTGGTCCCTTTAGCCAAGTGGACTTTGGCTaGGTGAGAACTCTCCTCTGT	+
Preference number: 5 (lower is better) Translates to: SFILPWELLAPLGTGPFSQVDFG*VRTLLC Trigger: ACAGAGGAGAGTTCTCACCAAGCCAAAGTCCACTTG...GCTAAAGGGACCAGTCCCTAGGGGAGCCAAGAGCTCCCAAGGAAGGATGAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	GGCTATCGGCAGCTTGGTTGTTGGAGGCAGGAGAGCAGGCCAGACTGGCAACAGAATGGGCAAGGTTGGTaGAGACTTCTTCACACTGTT	+
Preference number: 5 (lower is better) Translates to: GYRQLGCWRQESRPDWQQNGQGW*RLLHTV Trigger: AACAGTGTGAAGAAGTCTCAACCAACCTTGCCCATT...CTGTTGCCAGTCTGGCCTGCTCTCCTGCCTCCAACAACCAAGCTGCCGATAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	GCAGGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTCCCCTTGGATCTGCAGGCGTTCATCAATaGTGGAAATGGGCAAGGTTG	+
Preference number: 5 (lower is better) Translates to: AGPKSPEHSAWGQCPLGSAGVHQ*WKWARL Trigger: CAACCTTGCCCATTTCCACAATTGATGAACGCCTGC...AGATCCAAGGGGACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	AGGGAAGAGAAGATGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTTCCCAAAGAGTCTaGGTACTGGCTACGGCCATG	+
Preference number: 5 (lower is better) Translates to: REEKMEGPGAKGEAIGSLVSQRV*VLATAM Trigger: CATGGCCGTAGCCAGTACCAAGACTCTTTGGGAAAC...CAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCATCTTCTCTTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	TCCGTAAACAGGGCAGGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTCCAGATGGGGTGCTCTaGATGGTGGATGAGATCTTG	+
Preference number: 5 (lower is better) Translates to: SVNRAGPKSPEHSAWGQCPDGVL*MVDEIL Trigger: CAAGATCTCATCCACCATCAAGAGCACCCCATCTGG...ACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCCTGCCCTGTTTACGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS CCA 90 bp	GTGGACTTTGGCTTGGTGAGAACTCTCCTCTGTTTGTTTCTCCTCTaGTCTCTCGCTTTGAGAGGGTTCAGTCCCTTCTGCAGTCCCCTC	+
Preference number: 5 (lower is better) Translates to: VDFGLVRTLLCLFLL*SLALRGFSPFCSPL Trigger: GAGGGGACTGCAGAAGGGACTGAACCCTCTCAAAGCGAGAGACCAGAGGAGAAACAAACAGAGGAGAGTTCTCACCAAGCCAAAGTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	GCAACAGGAAGCAATTTCTTGGTCAGGGCTGGGAGTGGCATCCGGCCGGAGTCTTCATCTTCTTTATCTTaGTCCTGGTCCTGTAGCTGC	+
Preference number: 5 (lower is better) Translates to: ATGSNFLVRAGSGIRPESSSSLS*SWSCSC Trigger: GCAGCTACAGGACCAGGACAAAGATAAAGAAGATGA...AGACTCCGGCCGGATGCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTGTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8
CDS-3UTR CAA 90 bp	GAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTGTTGGAGGCAGGAGAGCAGGCCTCATCTTCTTTATCTTaGTCCTGGTCCTGTAGCTGC	+
Preference number: 5 (lower is better) Translates to: EQKERLSAAWLLEAGEQASSSLS*SWSCSC Trigger: GCAGCTACAGGACCAGGACAAAGATAAAGAAGATGA...GGCCTGCTCTCCTGCCTCCAACAACCAAGCTGCCGATAGCCTCTCCTTTTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	CAGGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTCCCCTTGGATCTGAGAACTCTCCTCTGTTaGTTTCTCCTCTGGTCTCTC	+
Preference number: 5 (lower is better) Translates to: QDPRVLSIQHGDSVPLDLRTLLC*FLLWSL Trigger: GAGAGACCAGAGGAGAAACAAACAGAGGAGAGTTCT...CAGATCCAAGGGGACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	AGCAGGCCAGACTGGCAACAGGAAGCAATTTCTTGGTCAGGGCTGGGAGTGGCAAGAACTCTCCTCTGTTaGTTTCTCCTCTGGTCTCTC	+
Preference number: 5 (lower is better) Translates to: SRPDWQQEAISWSGLGVARTLLC*FLLWSL Trigger: GAGAGACCAGAGGAGAAACAAACAGAGGAGAGTTCT...TGCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTGTTGCCAGTCTGGCCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	ACAGGGCAGGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTCCCCTTGGACTTCTTCACACTGTaGCTCTTTTTAATGGAGCGG	+
Preference number: 5 (lower is better) Translates to: TGQDPRVLSIQHGDSVPLDFFTL*LFLMER Trigger: CCGCTCCATTAAAAAGAGCAACAGTGTGAAGAAGTC...CAAGGGGACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCCTGCCCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	AGACTGGCAACAGGAAGCAATTTCTTGGTCAGGGCTGGGAGTGGCATCCGGCCGAATGGGCAAGGTTGGTaGAGACTTCTTCACACTGTT	+
Preference number: 5 (lower is better) Translates to: RLATGSNFLVRAGSGIRPNGQGW*RLLHTV Trigger: AACAGTGTGAAGAAGTCTCAACCAACCTTGCCCATT...CGGCCGGATGCCACTCCCAGCCCTGACCAAGAAATTGCTTCCTGTTGCCAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	GGGAAGAGAAGATGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTGGAAATGGGCAAGGTaGGTTGAGACTTCTTCACAC	+
Preference number: 5 (lower is better) Translates to: GKRRWRVQEQKERLSAAWWKWAR*VETSSH Trigger: GTGTGAAGAAGTCTCAACCAACCTTGCCCATTTCCA...CCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCATCTTCTCTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	GAGGGAAGAGAAGATGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGCAGGCGTTCATCAATaGTGGAAATGGGCAAGGTTG	+
Preference number: 5 (lower is better) Translates to: EGREDGGSRSKRRGYRQLAGVHQ*WKWARL Trigger: CAACCTTGCCCATTTCCACAATTGATGAACGCCTGC...AAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCATCTTCTCTTCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	GAAGAGAAGATGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTGTTTCCCAAAGAGTCTaGGTACTGGCTACGGCCATG	+
Preference number: 5 (lower is better) Translates to: EEKMEGPGAKGEAIGSLVVSQRV*VLATAM Trigger: CATGGCCGTAGCCAGTACCAAGACTCTTTGGGAAAC...AACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCATCTTCTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS CCA 90 bp	GATCGGGCTCCCTGTAGCTCAGGTTTGACTCCTCCAAGTGGACTTTaGCTTGGTGAGAACTCTCCTCTGTTTGTTTCTCCTCTGGTCTCT	+
Preference number: 5 (lower is better) Translates to: DRAPCSSGLTPPSGL*LGENSPLFVSPLVS Trigger: AGAGACCAGAGGAGAAACAAACAGAGGAGAGTTCTCACCAAGCCAAAGTCCACTTGGAGGAGTCAAACCTGAGCTACAGGGAGCCCGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	TGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTGTTGGAGGCAGACTTCTTCACACTGTaGCTCTTTTTAATGGAGCGG	+
Preference number: 5 (lower is better) Translates to: WRVQEQKERLSAAWLLEADFFTL*LFLMER Trigger: CCGCTCCATTAAAAAGAGCAACAGTGTGAAGAAGTC...TGCCTCCAACAACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	AAAAGGAGAGGCTATCGGCAGCTTGGTTGTTGGAGGCAGGAGAGCAGGCCAGACAATGGGCAAGGTTGGTaGAGACTTCTTCACACTGTT	+
Preference number: 5 (lower is better) Translates to: KRRGYRQLGCWRQESRPDNGQGW*RLLHTV Trigger: AACAGTGTGAAGAAGTCTCAACCAACCTTGCCCATT...GTCTGGCCTGCTCTCCTGCCTCCAACAACCAAGCTGCCGATAGCCTCTCCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	TCCGTAAACAGGGCAGGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTTGGAAATGGGCAAGGTaGGTTGAGACTTCTTCACAC	+
Preference number: 5 (lower is better) Translates to: SVNRAGPKSPEHSAWGQCWKWAR*VETSSH Trigger: GTGTGAAGAAGTCTCAACCAACCTTGCCCATTTCCA...ACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCCTGCCCTGTTTACGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	GAAGAGAAGATGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTGCAGGCGTTCATCAATaGTGGAAATGGGCAAGGTTG	+
Preference number: 5 (lower is better) Translates to: EEKMEGPGAKGEAIGSLVAGVHQ*WKWARL Trigger: CAACCTTGCCCATTTCCACAATTGATGAACGCCTGC...AACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCATCTTCTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS GCA 90 bp	CCCTCATCTTCATCCAGTTCAGAGGACTTCAGGCTGATGAGTGTCTaGTGTCCTGGCTGTTCCAGGGAATGGCCACCATCATCTTCTTTA	+
Preference number: 5 (lower is better) Translates to: PSSSSSSEDFRLMSV*CPGCSREWPPSSSL Trigger: TAAAGAAGATGATGGTGGCCATTCCCTGGAACAGCCAGGACAGCAGACACTCATCAGCCTGAAGTCCTCTGAACTGGATGAAGATGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	TCAATGCACTTTATTACACAAAATGAGGGATCCGTAAACAGGGCAGGACCCAAGCCGTGGCTCCGGCTTTaGGGACCAGTCACCAAAACC	+
Preference number: 5 (lower is better) Translates to: SMHFITQNEGSVNRAGPKPWLRL*GPVTKT Trigger: GGTTTTGGTGACTGGTCCCAAAAGCCGGAGCCACGG...CTTGGGTCCTGCCCTGTTTACGGATCCCTCATTTTGTGTAATAAAGTGCATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	GAAGAGAAGATGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTAGAACTCTCCTCTGTTaGTTTCTCCTCTGGTCTCTC	+
Preference number: 5 (lower is better) Translates to: EEKMEGPGAKGEAIGSLVRTLLC*FLLWSL Trigger: GAGAGACCAGAGGAGAAACAAACAGAGGAGAGTTCT...AACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCATCTTCTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	GAGAAGATGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTGTTAGAACTCTCCTCTGTTaGTTTCTCCTCTGGTCTCTC	+
Preference number: 5 (lower is better) Translates to: EKMEGPGAKGEAIGSLVVRTLLC*FLLWSL Trigger: GAGAGACCAGAGGAGAAACAAACAGAGGAGAGTTCT...AACAACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCATCTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	CTGGTCCCTTTAGCTGATGGTGAGAAGCAGAGTTGGAGGGTTGGTCAAAGGATGCAAGTGGACTTTGGCTaGGTGAGAACTCTCCTCTGT	+
Preference number: 5 (lower is better) Translates to: LVPLADGEKQSWRVGQRMQVDFG*VRTLLC Trigger: ACAGAGGAGAGTTCTCACCAAGCCAAAGTCCACTTG...CATCCTTTGACCAACCCTCCAACTCTGCTTCTCACCATCAGCTAAAGGGACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	TGGTTGCCCACAGAGCTGATCAAGTCTCAAGTGGCCAACAGATATGGCCCTTTCCAAGTGGACTTTGGCTaGGTGAGAACTCTCCTCTGT	+
Preference number: 5 (lower is better) Translates to: WLPTELIKSQVANRYGPFQVDFG*VRTLLC Trigger: ACAGAGGAGAGTTCTCACCAAGCCAAAGTCCACTTG...GAAAGGGCCATATCTGTTGGCCACTTGAGACTTGATCAGCTCTGTGGGCAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	GAGGGAAGAGAAGATGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGACTTCTTCACACTGTaGCTCTTTTTAATGGAGCGG	+
Preference number: 5 (lower is better) Translates to: EGREDGGSRSKRRGYRQLDFFTL*LFLMER Trigger: CCGCTCCATTAAAAAGAGCAACAGTGTGAAGAAGTC...AAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCATCTTCTCTTCCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	TCCGTAAACAGGGCAGGACCCAAGAGTCCTGAGCATTCAGCATGGGGACAGTGTGACTTCTTCACACTGTaGCTCTTTTTAATGGAGCGG	+
Preference number: 5 (lower is better) Translates to: SVNRAGPKSPEHSAWGQCDFFTL*LFLMER Trigger: CCGCTCCATTAAAAAGAGCAACAGTGTGAAGAAGTC...ACACTGTCCCCATGCTGAATGCTCAGGACTCTTGGGTCCTGCCCTGTTTACGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	GCCCACAGAGCTGATCAAGTCTCAAGTGGCCAACAGATATGGCCCTTTCTGTTTATGGTGGATGAGATCTaGGAGCCTCCTTTCTGCTCC	+
Preference number: 5 (lower is better) Translates to: AHRADQVSSGQQIWPFLFMVDEI*EPPFCS Trigger: GGAGCAGAAAGGAGGCTCCAAGATCTCATCCACCAT...AAACAGAAAGGGCCATATCTGTTGGCCACTTGAGACTTGATCAGCTCTGTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS-3UTR CAA 90 bp	GAAGAGAAGATGGAGGGTCCAGGAGCAAAAGGAGAGGCTATCGGCAGCTTGGTTAATGGGCAAGGTTGGTaGAGACTTCTTCACACTGTT	+
Preference number: 5 (lower is better) Translates to: EEKMEGPGAKGEAIGSLVNGQGW*RLLHTV Trigger: AACAGTGTGAAGAAGTCTCAACCAACCTTGCCCATT...AACCAAGCTGCCGATAGCCTCTCCTTTTGCTCCTGGACCCTCCATCTTCTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	CAAAATGAGGGATCCGTAAACAGGGCAGGACCCAAGAGTCCTGAGCATTCAGCATGGAAATGGGCAAGGTaGGTTGAGACTTCTTCACAC	+
Preference number: 5 (lower is better) Translates to: QNEGSVNRAGPKSPEHSAWKWAR*VETSSH Trigger: GTGTGAAGAAGTCTCAACCAACCTTGCCCATTTCCA...TGCTGAATGCTCAGGACTCTTGGGTCCTGCCCTGTTTACGGATCCCTCATTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	ATTACACAAAATGAGGGATCCGTAAACAGGGCAGGACCCAAGAGTCCTGAGCATATGGTGGATGAGATCTaGGAGCCTCCTTTCTGCTCC	+
Preference number: 5 (lower is better) Translates to: ITQNEGSVNRAGPKSPEHMVDEI*EPPFCS Trigger: GGAGCAGAAAGGAGGCTCCAAGATCTCATCCACCAT...ATGCTCAGGACTCTTGGGTCCTGCCCTGTTTACGGATCCCTCATTTTGTGTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS-3UTR CAA 90 bp	ATTACACAAAATGAGGGATCCGTAAACAGGGCAGGACCCAAGAGTCCTGAGCATCCAGATGGGGTGCTCTaGATGGTGGATGAGATCTTG	+
Preference number: 5 (lower is better) Translates to: ITQNEGSVNRAGPKSPEHPDGVL*MVDEIL Trigger: CAAGATCTCATCCACCATCAAGAGCACCCCATCTGG...ATGCTCAGGACTCTTGGGTCCTGCCCTGTTTACGGATCCCTCATTTTGTGTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS CCA 90 bp	AAGACTCAGTGGCCTGGGTATACTGCTGCAGGCGTTCATCAATTGTaGAAATGGGCAAGGTTGGTTGAGACTTCTTCACACTGTTGCTCT	+
Preference number: 5 (lower is better) Translates to: KTQWPGYTAAGVHQL*KWARLVETSSHCCS Trigger: AGAGCAACAGTGTGAAGAAGTCTCAACCAACCTTGCCCATTTCCACAATTGATGAACGCCTGCAGCAGTATACCCAGGCCACTGAGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	CAAAATGAGGGATCCGTAAACAGGGCAGGACCCAAGAGTCCTGAGCATTCAGCATCATCTTCTTTATCTTaGTCCTGGTCCTGTAGCTGC	+
Preference number: 5 (lower is better) Translates to: QNEGSVNRAGPKSPEHSASSSLS*SWSCSC Trigger: GCAGCTACAGGACCAGGACAAAGATAAAGAAGATGA...TGCTGAATGCTCAGGACTCTTGGGTCCTGCCCTGTTTACGGATCCCTCATTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	GCTGATGGTGAGAAGCAGAGTTGGAGGGTTGGTCAAAGGATGAGAGGGAAGAGATCATCTTCTTTATCTTaGTCCTGGTCCTGTAGCTGC	+
Preference number: 5 (lower is better) Translates to: ADGEKQSWRVGQRMRGKRSSSLS*SWSCSC Trigger: GCAGCTACAGGACCAGGACAAAGATAAAGAAGATGA...TCTCTTCCCTCTCATCCTTTGACCAACCCTCCAACTCTGCTTCTCACCATCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	TCAAGTCTCAAGTGGCCAACAGATATGGCCCTTTCTGTTTTGATCACCGTGTTCCCCTGTAGCTCAGGTTaGACTCCTCCAAGTGGACTT	+
Preference number: 5 (lower is better) Translates to: SSLKWPTDMALSVLITVFPCSSG*TPPSGL Trigger: AAGTCCACTTGGAGGAGTCAAACCTGAGCTACAGGG...GAACACGGTGATCAAAACAGAAAGGGCCATATCTGTTGGCCACTTGAGACTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	CTGGTCCCTTTAGCTGATGGTGAGAAGCAGAGTTGGAGGGTTGGTCAAAGGATGAATGGGCAAGGTTGGTaGAGACTTCTTCACACTGTT	+
Preference number: 5 (lower is better) Translates to: LVPLADGEKQSWRVGQRMNGQGW*RLLHTV Trigger: AACAGTGTGAAGAAGTCTCAACCAACCTTGCCCATT...CATCCTTTGACCAACCCTCCAACTCTGCTTCTCACCATCAGCTAAAGGGACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	ACATCCATTATTAATACCCCAGCTTGGGTCACCTCATACCTCAGATCCTGGAACGTTTCCCAAAGAGTCTaGGTACTGGCTACGGCCATG	+
Preference number: 5 (lower is better) Translates to: TSIINTPAWVTSYLRSWNVSQRV*VLATAM Trigger: CATGGCCGTAGCCAGTACCAAGACTCTTTGGGAAAC...GTTCCAGGATCTGAGGTATGAGGTGACCCAAGCTGGGGTATTAATAATGGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	ATTACACAAAATGAGGGATCCGTAAACAGGGCAGGACCCAAGAGTCCTGAGCATTGGAAATGGGCAAGGTaGGTTGAGACTTCTTCACAC	+
Preference number: 5 (lower is better) Translates to: ITQNEGSVNRAGPKSPEHWKWAR*VETSSH Trigger: GTGTGAAGAAGTCTCAACCAACCTTGCCCATTTCCA...ATGCTCAGGACTCTTGGGTCCTGCCCTGTTTACGGATCCCTCATTTTGTGTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS TCA 90 bp	TACTGCTGCAGGCGTTCATCAATTGTGGAAATGGGCAAGGTTGGTTaGGACTTCTTCACACTGTTGCTCTTTTTAATGGAGCGGTTCAGG	+
Preference number: 5 (lower is better) Translates to: YCCRRSSIVEMGKVG*DFFTLLLFLMERFR Trigger: CCTGAACCGCTCCATTAAAAAGAGCAACAGTGTGAAGAAGTCTCAACCAACCTTGCCCATTTCCACAATTGATGAACGCCTGCAGCAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	GGTCACCTCATACCTCAGATCCTGGAACATAACACACTGCAAGGCCAAAAGACAGACTTCTTCACACTGTaGCTCTTTTTAATGGAGCGG	+
Preference number: 5 (lower is better) Translates to: GHLIPQILEHNTLQGQKTDFFTL*LFLMER Trigger: CCGCTCCATTAAAAAGAGCAACAGTGTGAAGAAGTC...TGTCTTTTGGCCTTGCAGTGTGTTATGTTCCAGGATCTGAGGTATGAGGTGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8
CDS CCA 90 bp	GGTATACTGCTGCAGGCGTTCATCAATTGTGGAAATGGGCAAGGTTaGTTGAGACTTCTTCACACTGTTGCTCTTTTTAATGGAGCGGTT	+
Preference number: 5 (lower is better) Translates to: GILLQAFINCGNGQG*LRLLHTVALFNGAV Trigger: AACCGCTCCATTAAAAAGAGCAACAGTGTGAAGAAGTCTCAACCAACCTTGCCCATTTCCACAATTGATGAACGCCTGCAGCAGTATACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	TCAATGCACTTTATTACACAAAATGAGGGATCCGTAAACAGGGCAGGACCCAAGAGAACTCTCCTCTGTTaGTTTCTCCTCTGGTCTCTC	+
Preference number: 5 (lower is better) Translates to: SMHFITQNEGSVNRAGPKRTLLC*FLLWSL Trigger: GAGAGACCAGAGGAGAAACAAACAGAGGAGAGTTCT...CTTGGGTCCTGCCCTGTTTACGGATCCCTCATTTTGTGTAATAAAGTGCATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	ACAGAGCTGATCAAGTCTCAAGTGGCCAACAGATATGGCCCTTTCTGTTTTGATTCATCTTCTTTATCTTaGTCCTGGTCCTGTAGCTGC	+
Preference number: 5 (lower is better) Translates to: TELIKSQVANRYGPFCFDSSSLS*SWSCSC Trigger: GCAGCTACAGGACCAGGACAAAGATAAAGAAGATGA...ATCAAAACAGAAAGGGCCATATCTGTTGGCCACTTGAGACTTGATCAGCTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8
CDS-3UTR CAA 90 bp	GCACAGGAGATCCAAATGCATAGGGGACACTCAATGCACTTTATTACACAAAATCAAGTGGACTTTGGCTaGGTGAGAACTCTCCTCTGT	+
Preference number: 5 (lower is better) Translates to: AQEIQMHRGHSMHFITQNQVDFG*VRTLLC Trigger: ACAGAGGAGAGTTCTCACCAAGCCAAAGTCCACTTG...ATTTTGTGTAATAAAGTGCATTGAGTGTCCCCTATGCATTTGGATCTCCTGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018963.11 ENSMUST00000105968.8
CDS TCA 72 bp	CAACGGTGTCTTCTAAGGCCAAAGGGCTGGGGGTCCTaGCCTGATGACGTATCAGATGCTCTTCCGCCTCCC	+
Preference number: 6 (lower is better) Translates to: QRCLLRPKGWGS*PDDVSDALPPP Trigger: GGGAGGCGGAAGAGCATCTGATACGTCATCAGGTCAGGACCCCCAGCCCTTTGGCCTTAGAAGACACCGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105968.8
CDS CAA 72 bp	CTCATTCCCCCAGAATTGCTGCCGTGGCTCCGGCTTTaGGGACCAGTCACCAAAACCCTCATCTTCATCCAG	+
Preference number: 6 (lower is better) Translates to: LIPPELLPWLRL*GPVTKTLIFIQ Trigger: CTGGATGAAGATGAGGGTTTTGGTGACTGGTCCCAAAAGCCGGAGCCACGGCAGCAATTCTGGGGGAATGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS CAA 72 bp	CAGCATCCTCTGGATCGGGCTCCCTGTAGCTCAGGTTaGACTCCTCCAAGTGGACTTTGGCTTGGTGAGAAC	+
Preference number: 6 (lower is better) Translates to: QHPLDRAPCSSG*TPPSGLWLGEN Trigger: GTTCTCACCAAGCCAAAGTCCACTTGGAGGAGTCAAACCTGAGCTACAGGGAGCCCGATCCAGAGGATGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS TCA 72 bp	AGCATCCTCTGGATCGGGCTCCCTGTAGCTCAGGTTTaGCTCCTCCAAGTGGACTTTGGCTTGGTGAGAACT	+
Preference number: 6 (lower is better) Translates to: SILWIGLPVAQV*LLQVDFGLVRT Trigger: AGTTCTCACCAAGCCAAAGTCCACTTGGAGGAGTCAAACCTGAGCTACAGGGAGCCCGATCCAGAGGATGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS GCA 72 bp	TCATCCAGTTCAGAGGACTTCAGGCTGATGAGTGTCTaGTGTCCTGGCTGTTCCAGGGAATGGCCACCATCA	+
Preference number: 6 (lower is better) Translates to: SSSSEDFRLMSV*CPGCSREWPPS Trigger: TGATGGTGGCCATTCCCTGGAACAGCCAGGACAGCAGACACTCATCAGCCTGAAGTCCTCTGAACTGGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS GCA 72 bp	GTTCGGCCAGAAGACTCAGTGGCCTGGGTATACTGCTaGAGGCGTTCATCAATTGTGGAAATGGGCAAGGTT	+
Preference number: 6 (lower is better) Translates to: VRPEDSVAWVYC*RRSSIVEMGKV Trigger: AACCTTGCCCATTTCCACAATTGATGAACGCCTGCAGCAGTATACCCAGGCCACTGAGTCTTCTGGCCGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS CAA 72 bp	ACTTTCTCGTACTTCCCATGTCCAGTGGCCACGAACTaGTACCGCTTTCCAGATGGGGTGCTCTTGATGGTG	+
Preference number: 6 (lower is better) Translates to: TFSYFPCPVATN*YRFPDGVLLMV Trigger: CACCATCAAGAGCACCCCATCTGGAAAGCGGTACAAGTTCGTGGCCACTGGACATGGGAAGTACGAGAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS CAA 90 bp	TTGGTGAGAACTCTCCTCTGTTTGTTTCTCCTCTGGTCTCTCGCTTaGAGAGGGTTCAGTCCCTTCTGCAGTCCCCTCATTCCCCCAGAA	+
Preference number: 6 (lower is better) Translates to: LVRTLLCLFLLWSLA*RGFSPFCSPLIPPE Trigger: TTCTGGGGGAATGAGGGGACTGCAGAAGGGACTGAACCCTCTCAAAGCGAGAGACCAGAGGAGAAACAAACAGAGGAGAGTTCTCACCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS CAA 90 bp	TCCACAAGTACTTTCTCGTACTTCCCATGTCCAGTGGCCACGAACTaGTACCGCTTTCCAGATGGGGTGCTCTTGATGGTGGATGAGATC	+
Preference number: 6 (lower is better) Translates to: STSTFSYFPCPVATN*YRFPDGVLLMVDEI Trigger: GATCTCATCCACCATCAAGAGCACCCCATCTGGAAAGCGGTACAAGTTCGTGGCCACTGGACATGGGAAGTACGAGAAAGTACTTGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS CAA 72 bp	ACTCTCCTCTGTTTGTTTCTCCTCTGGTCTCTCGCTTaGAGAGGGTTCAGTCCCTTCTGCAGTCCCCTCATT	+
Preference number: 6 (lower is better) Translates to: TLLCLFLLWSLA*RGFSPFCSPLI Trigger: AATGAGGGGACTGCAGAAGGGACTGAACCCTCTCAAAGCGAGAGACCAGAGGAGAAACAAACAGAGGAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS CAA 90 bp	CAGAAGACTCAGTGGCCTGGGTATACTGCTGCAGGCGTTCATCAATaGTGGAAATGGGCAAGGTTGGTTGAGACTTCTTCACACTGTTGC	+
Preference number: 6 (lower is better) Translates to: QKTQWPGYTAAGVHQ*WKWARLVETSSHCC Trigger: GCAACAGTGTGAAGAAGTCTCAACCAACCTTGCCCATTTCCACAATTGATGAACGCCTGCAGCAGTATACCCAGGCCACTGAGTCTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS TCA 72 bp	CTCAGGTTTGACTCCTCCAAGTGGACTTTGGCTTGGTaGGAACTCTCCTCTGTTTGTTTCTCCTCTGGTCTC	+
Preference number: 6 (lower is better) Translates to: LRFDSSKWTLAW*ELSSVCFSSGL Trigger: GAGACCAGAGGAGAAACAAACAGAGGAGAGTTCTCACCAAGCCAAAGTCCACTTGGAGGAGTCAAACCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS CCA 72 bp	TGGCCTGGGTATACTGCTGCAGGCGTTCATCAATTGTaGAAATGGGCAAGGTTGGTTGAGACTTCTTCACAC	+
Preference number: 6 (lower is better) Translates to: WPGYTAAGVHQL*KWARLVETSSH Trigger: GTGTGAAGAAGTCTCAACCAACCTTGCCCATTTCCACAATTGATGAACGCCTGCAGCAGTATACCCAGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS CAA 72 bp	CAAGTGGACTTTGGCTTGGTGAGAACTCTCCTCTGTTaGTTTCTCCTCTGGTCTCTCGCTTTGAGAGGGTTC	+
Preference number: 6 (lower is better) Translates to: QVDFGLVRTLLC*FLLWSLALRGF Trigger: GAACCCTCTCAAAGCGAGAGACCAGAGGAGAAACAAACAGAGGAGAGTTCTCACCAAGCCAAAGTCCACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS CAA 72 bp	CAGTGGCCTGGGTATACTGCTGCAGGCGTTCATCAATaGTGGAAATGGGCAAGGTTGGTTGAGACTTCTTCA	+
Preference number: 6 (lower is better) Translates to: QWPGYTAAGVHQ*WKWARLVETSS Trigger: TGAAGAAGTCTCAACCAACCTTGCCCATTTCCACAATTGATGAACGCCTGCAGCAGTATACCCAGGCCACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS TCA 72 bp	ACTATATCCTGGCAGGAGGGTGTCTTAGAAGCAGACTaGCTCTGCACTTCTCCTGTTTCCCAAAGAGTCTTG	+
Preference number: 6 (lower is better) Translates to: TISWQEGVLEAD*LCTSPVSQRVL Trigger: CAAGACTCTTTGGGAAACAGGAGAAGTGCAGAGTCAGTCTGCTTCTAAGACACCCTCCTGCCAGGATATAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8 ENSMUST00000149521.8
CDS CCA 72 bp	GGGTATACTGCTGCAGGCGTTCATCAATTGTGGAAATaGGCAAGGTTGGTTGAGACTTCTTCACACTGTTGC	+
Preference number: 6 (lower is better) Translates to: GYTAAGVHQLWK*ARLVETSSHCC Trigger: GCAACAGTGTGAAGAAGTCTCAACCAACCTTGCCCATTTCCACAATTGATGAACGCCTGCAGCAGTATACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8
CDS CAA 90 bp	ATACTGCTGCAGGCGTTCATCAATTGTGGAAATGGGCAAGGTTGGTaGAGACTTCTTCACACTGTTGCTCTTTTTAATGGAGCGGTTCAG	+
Preference number: 6 (lower is better) Translates to: ILLQAFINCGNGQGW*RLLHTVALFNGAVQ Trigger: CTGAACCGCTCCATTAAAAAGAGCAACAGTGTGAAGAAGTCTCAACCAACCTTGCCCATTTCCACAATTGATGAACGCCTGCAGCAGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000018963.11 ENSMUST00000038946.9 ENSMUST00000105966.2 ENSMUST00000105967.8 ENSMUST00000105968.8

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu