Pregenerated sensors for LSM14B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039108Ensembl transcript IDs: ENSMUST00000055485.12, ENSMUST00000058764.6
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCACTGAAGCGCTGTGGCTTTCTGAAGGGTTTGGGTTATCAAGGTaGTTGTTTTCAACAGTGCCCTGTCAGTCAGAGGATGCATGCTTA | + |
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Preference number: 1 (lower is better) Translates to: STEALWLSEGFGLSR*LFSTVPCQSEDACL Trigger: TAAGCATGCATCCTCTGACTGACAGGGCACTGTTGAAAACAAGCACCTTGATAACCCAAACCCTTCAGAAAGCCACAGCGCTTCAGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| 3UTR-3UTR GCA 90 bp | GCCCTTCCCACTACTTCACTCATCCCGTTAGCCCCCAGCACTGAACATCACTGGGACTGGCTCACCCTGTaGTGGCCCTGCCTGGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: ALPTTSLIPLAPSTEHHWDWLTL*WPCLAP Trigger: AGGAGCCAGGCAGGGCCAGCACAGGGTGAGCCAGTC...CCAGTGATGTTCAGTGCTGGGGGCTAACGGGATGAGTGAAGTAGTGGGAAGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| 3UTR-3UTR CCA 90 bp | CTTCCCACTACTTCACTCATCCCGTTAGCCCCCAGCACTGAACATCACTGGTTCCCCACCCCGTGTGACTaGCTCACCCTGTGCTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: LPTTSLIPLAPSTEHHWFPTPCD*LTLCWP Trigger: GGGCCAGCACAGGGTGAGCCAGTCACACGGGGTGGG...GAACCAGTGATGTTCAGTGCTGGGGGCTAACGGGATGAGTGAAGTAGTGGGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| 3UTR-3UTR TCA 90 bp | ACCAGGCCAGCAGCACCAGGGGCCAGATGGGTTGCAGAGACACATTTGGACACCTTACAAAGTGAGGATTaGGCCTTTGCCTATAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: TRPAAPGARWVAETHLDTLQSED*AFAYRN Trigger: GTTTCTATAGGCAAAGGCTCAATCCTCACTTTGTAA...GGTGTCCAAATGTGTCTCTGCAACCCATCTGGCCCCTGGTGCTGCTGGCCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| 3UTR-3UTR TCA 90 bp | TTGGGGTACCAGGCCAGCAGCACCAGGGGCCAGATGGGTTGCAGAGACACATTTTTACAAAGTGAGGATTaGGCCTTTGCCTATAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: LGYQASSTRGQMGCRDTFLQSED*AFAYRN Trigger: GTTTCTATAGGCAAAGGCTCAATCCTCACTTTGTAA...AAATGTGTCTCTGCAACCCATCTGGCCCCTGGTGCTGCTGGCCTGGTACCCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| 3UTR-3UTR GCA 90 bp | CTGAAGTCCTACACAAAGATAAAGCCAAGCTTTCACGCTGTGGCTTCATCAGTATCAGGGCAGCACCTCTaGCTCTGCTGGACCTTGTAC | + |
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Preference number: 2 (lower is better) Translates to: LKSYTKIKPSFHAVASSVSGQHL*LCWTLY Trigger: GTACAAGGTCCAGCAGAGGCAGAGGTGCTGCCCTGA...TACTGATGAAGCCACAGCGTGAAAGCTTGGCTTTATCTTTGTGTAGGACTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| 3UTR-3UTR GCA 90 bp | GCCCTTCCCACTACTTCACTCATCCCGTTAGCCCCCAGCACTGAACATCACTGGTTTGGACACCACATGTaGCAAATAAAATTTGGTTCC | + |
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Preference number: 2 (lower is better) Translates to: ALPTTSLIPLAPSTEHHWFGHHM*QIKFGS Trigger: GGAACCAAATTTTATTTGGCACATGTGGTGTCCAAA...CCAGTGATGTTCAGTGCTGGGGGCTAACGGGATGAGTGAAGTAGTGGGAAGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| 3UTR-3UTR CCA 90 bp | CTGAAGTCCTACACAAAGATAAAGCCAAGCTTTCACGCTGTGGCTTCATCAGTAAGCAGACAGGAAGGTTaGACACACCACACCACACGA | + |
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Preference number: 2 (lower is better) Translates to: LKSYTKIKPSFHAVASSVSRQEG*THHTTR Trigger: TCGTGTGGTGTGGTGTGTCCAACCTTCCTGTCTGCT...TACTGATGAAGCCACAGCGTGAAAGCTTGGCTTTATCTTTGTGTAGGACTTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| 3UTR-3UTR TCA 90 bp | CTGAAGTCCTACACAAAGATAAAGCCAAGCTTTCACGCTGTGGCTTCATCAGTAGGCTATTTTACGCCGTaGCTTCATCAGCACAGCACT | + |
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Preference number: 2 (lower is better) Translates to: LKSYTKIKPSFHAVASSVGYFTP*LHQHST Trigger: AGTGCTGTGCTGATGAAGTCACGGCGTAAAATAGCC...TACTGATGAAGCCACAGCGTGAAAGCTTGGCTTTATCTTTGTGTAGGACTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| 3UTR-3UTR GCA 90 bp | CCAGTGCTATGTTCTACTCTCAGCTCTGAAGTCCTACACAAAGATAAAGCCAAGTGGGTTTCAACACTATaGCTCAGTGCCTGTGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: PVLCSTLSSEVLHKDKAKWVSTL*LSACGR Trigger: CCTTCCACAGGCACTGAGGCATAGTGTTGAAACCCA...CTTGGCTTTATCTTTGTGTAGGACTTCAGAGCTGAGAGTAGAACATAGCACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| 3UTR-3UTR TCA 90 bp | CTGAAGTCCTACACAAAGATAAAGCCAAGCTTTCACGCTGTGGCTTCATCAGTATCATTTAAAAGTGAATaGGAACACTTAAGTGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: LKSYTKIKPSFHAVASSVSFKSE*EHLSAA Trigger: GGCTGCACTTAAGTGTTCTCATTCACTTTTAAATGA...TACTGATGAAGCCACAGCGTGAAAGCTTGGCTTTATCTTTGTGTAGGACTTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| 3UTR-3UTR CAA 90 bp | TGCCCTGGCCCTCCCACCCCGTGTGACTGGCTCACCCTGTGCTGGCCCTGCCTGCAGGGGCCAGATGGGTaGCAGAGACACATTTGGACA | + |
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Preference number: 3 (lower is better) Translates to: CPGPPTPCDWLTLCWPCLQGPDG*QRHIWT Trigger: TGTCCAAATGTGTCTCTGCAACCCATCTGGCCCCTG...CAGGCAGGGCCAGCACAGGGTGAGCCAGTCACACGGGGTGGGAGGGCCAGGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| 3UTR CCA 72 bp | CCTGCCTGGCTCCTGAGACTTCCCACTTTTAGCAGTTaGGGTACCAGGCCAGCAGCACCAGGGGCCAGATGG | + |
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Preference number: 3 (lower is better) Translates to: PAWLLRLPTFSS*GTRPAAPGARW Trigger: CCATCTGGCCCCTGGTGCTGCTGGCCTGGTACCCCAACTGCTAAAAGTGGGAAGTCTCAGGAGCCAGGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| 3UTR CCA 72 bp | AGTTGGGGTACCAGGCCAGCAGCACCAGGGGCCAGATaGGTTGCAGAGACACATTTGGACACCACATGTGCC | + |
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Preference number: 3 (lower is better) Translates to: SWGTRPAAPGAR*VAETHLDTTCA Trigger: GGCACATGTGGTGTCCAAATGTGTCTCTGCAACCCATCTGGCCCCTGGTGCTGCTGGCCTGGTACCCCAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| 3UTR CCA 72 bp | CTTGCCTTGGGTTTCAACACTATGCCTCAGTGCCTGTaGAAGGCAGGCAGGCTCTACGTGACACTCACGCCC | + |
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Preference number: 3 (lower is better) Translates to: LALGFNTMPQCL*KAGRLYVTLTP Trigger: GGGCGTGAGTGTCACGTAGAGCCTGCCTGCCTTCCACAGGCACTGAGGCATAGTGTTGAAACCCAAGGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| 3UTR GCA 72 bp | GGGTACCAGGCCAGCAGCACCAGGGGCCAGATGGGTTaGAGAGACACATTTGGACACCACATGTGCCAAATA | + |
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Preference number: 3 (lower is better) Translates to: GYQASSTRGQMG*RDTFGHHMCQI Trigger: TATTTGGCACATGTGGTGTCCAAATGTGTCTCTGCAACCCATCTGGCCCCTGGTGCTGCTGGCCTGGTACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| 3UTR GCA 72 bp | CACGAGCTTGCCTTGGGTTTCAACACTATGCCTCAGTaGCTGTGGAAGGCAGGCAGGCTCTACGTGACACTC | + |
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Preference number: 3 (lower is better) Translates to: HELALGFNTMPQ*LWKAGRLYVTL Trigger: GAGTGTCACGTAGAGCCTGCCTGCCTTCCACAGGCACTGAGGCATAGTGTTGAAACCCAAGGCAAGCTCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| 3UTR-3UTR CAA 90 bp | GCCCTTCCCACTACTTCACTCATCCCGTTAGCCCCCAGCACTGAACATCACTGGCTGCTGACTGTAGTGTaGCCTTCTGTCCTTATCTTC | + |
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Preference number: 3 (lower is better) Translates to: ALPTTSLIPLAPSTEHHWLLTVV*PSVLIF Trigger: GAAGATAAGGACAGAAGGCAACACTACAGTCAGCAG...CCAGTGATGTTCAGTGCTGGGGGCTAACGGGATGAGTGAAGTAGTGGGAAGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| 3UTR-3UTR CAA 90 bp | ACCAGGCCAGCAGCACCAGGGGCCAGATGGGTTGCAGAGACACATTTGGACACCGTGAGGATTGAGCCTTaGCCTATAGAAACCTTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: TRPAAPGARWVAETHLDTVRIEP*PIETFL Trigger: CAAAAAGGTTTCTATAGGCAAAGGCTCAATCCTCAC...GGTGTCCAAATGTGTCTCTGCAACCCATCTGGCCCCTGGTGCTGCTGGCCTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| 3UTR-3UTR CAA 90 bp | CTTCCCACTACTTCACTCATCCCGTTAGCCCCCAGCACTGAACATCACTGGTTCCTGCTGACTGTAGTGTaGCCTTCTGTCCTTATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LPTTSLIPLAPSTEHHWFLLTVV*PSVLIF Trigger: GAAGATAAGGACAGAAGGCAACACTACAGTCAGCAG...GAACCAGTGATGTTCAGTGCTGGGGGCTAACGGGATGAGTGAAGTAGTGGGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| 3UTR-3UTR CAA 90 bp | GCCCTTCCCACTACTTCACTCATCCCGTTAGCCCCCAGCACTGAACATCACTGGGTGAGGATTGAGCCTTaGCCTATAGAAACCTTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: ALPTTSLIPLAPSTEHHWVRIEP*PIETFL Trigger: CAAAAAGGTTTCTATAGGCAAAGGCTCAATCCTCAC...CCAGTGATGTTCAGTGCTGGGGGCTAACGGGATGAGTGAAGTAGTGGGAAGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| 3UTR-3UTR CAA 90 bp | CTTCCCACTACTTCACTCATCCCGTTAGCCCCCAGCACTGAACATCACTGGTTCGTTGCAGAGACACATTaGGACACCACATGTGCCAAA | + |
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Preference number: 3 (lower is better) Translates to: LPTTSLIPLAPSTEHHWFVAETH*DTTCAK Trigger: TTTGGCACATGTGGTGTCCAAATGTGTCTCTGCAAC...GAACCAGTGATGTTCAGTGCTGGGGGCTAACGGGATGAGTGAAGTAGTGGGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| 3UTR CCA 72 bp | TCACTCATCCCGTTAGCCCCCAGCACTGAACATCACTaGTTCATTACACAACATGATCCATGGAACACCCCC | + |
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Preference number: 3 (lower is better) Translates to: SLIPLAPSTEHH*FITQHDPWNTP Trigger: GGGGGTGTTCCATGGATCATGTTGTGTAATGAACCAGTGATGTTCAGTGCTGGGGGCTAACGGGATGAGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| 3UTR GCA 72 bp | GCGCTGTGGCTTTCTGAAGGGTTTGGGTTATCAAGGTaGTTGTTTTCAACAGTGCCCTGTCAGTCAGAGGAT | + |
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Preference number: 3 (lower is better) Translates to: ALWLSEGFGLSR*LFSTVPCQSED Trigger: ATCCTCTGACTGACAGGGCACTGTTGAAAACAAGCACCTTGATAACCCAAACCCTTCAGAAAGCCACAGCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| 3UTR CCA 72 bp | ACGCTGTGGCTTCATCAGTACAGAACCAAAGCTCTGTaGCTATTTTACGCCGTGACTTCATCAGCACAGCAC | + |
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Preference number: 3 (lower is better) Translates to: TLWLHQYRTKAL*LFYAVTSSAQH Trigger: GTGCTGTGCTGATGAAGTCACGGCGTAAAATAGCCACAGAGCTTTGGTTCTGTACTGATGAAGCCACAGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| 3UTR-3UTR CAA 90 bp | CTGAAGTCCTACACAAAGATAAAGCCAAGCTTTCACGCTGTGGCTTCATCAGTAGGGTTATCAAGGTGCTaGTTTTCAACAGTGCCCTGT | + |
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Preference number: 3 (lower is better) Translates to: LKSYTKIKPSFHAVASSVGLSRC*FSTVPC Trigger: ACAGGGCACTGTTGAAAACAAGCACCTTGATAACCC...TACTGATGAAGCCACAGCGTGAAAGCTTGGCTTTATCTTTGTGTAGGACTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| 3UTR GCA 72 bp | AAGGGTTTGGGTTATCAAGGTGCTTGTTTTCAACAGTaGCCTGTCAGTCAGAGGATGCATGCTTATAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: KGLGYQGACFQQ*PVSQRMHAYRE Trigger: TTCTCTATAAGCATGCATCCTCTGACTGACAGGGCACTGTTGAAAACAAGCACCTTGATAACCCAAACCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| 3UTR TCA 72 bp | CTGTCAGTCAGAGGATGCATGCTTATAGAGAAGATCTaGCACATTTACTCATGCAACAAATTTATGTCCCCG | + |
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Preference number: 3 (lower is better) Translates to: LSVRGCMLIEKI*HIYSCNKFMSP Trigger: CGGGGACATAAATTTGTTGCATGAGTAAATGTGTCAGATCTTCTCTATAAGCATGCATCCTCTGACTGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS-3UTR CCA 90 bp | TGCCCTGGCCCTCCCACCCCGTGTGACTGGCTCACCCTGTGCTGGCCCTGCCTGGAAGCGGCATACTGCTaGCTGAGCAGGGAACTGGCT | + |
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Preference number: 4 (lower is better) Translates to: CPGPPTPCDWLTLCWPCLEAAYC*LSRELA Trigger: AGCCAGTTCCCTGCTCAGCCAGCAGTATGCCGCTTC...CAGGCAGGGCCAGCACAGGGTGAGCCAGTCACACGGGGTGGGAGGGCCAGGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS-3UTR CCA 90 bp | ACCAGGCCAGCAGCACCAGGGGCCAGATGGGTTGCAGAGACACATTTGGACACCCAGCCTGCTCCACCATaGGGCTCTTGCCGACTGGGG | + |
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Preference number: 4 (lower is better) Translates to: TRPAAPGARWVAETHLDTQPAPP*GSCRLG Trigger: CCCCAGTCGGCAAGAGCCCCATGGTGGAGCAGGCTG...GGTGTCCAAATGTGTCTCTGCAACCCATCTGGCCCCTGGTGCTGCTGGCCTGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS-3UTR CCA 90 bp | TGCCCTGGCCCTCCCACCCCGTGTGACTGGCTCACCCTGTGCTGGCCCTGCCTGTCAACAGAACTAGTCTaGACAGCCTGCTCCACCATG | + |
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Preference number: 4 (lower is better) Translates to: CPGPPTPCDWLTLCWPCLSTELV*TACSTM Trigger: CATGGTGGAGCAGGCTGTCCAGACTAGTTCTGTTGA...CAGGCAGGGCCAGCACAGGGTGAGCCAGTCACACGGGGTGGGAGGGCCAGGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS-3UTR TCA 90 bp | AGTTGGGGTACCAGGCCAGCAGCACCAGGGGCCAGATGGGTTGCAGAGACACATGGCTTGCTGCTTGGCTaGGCCTGGCGACCATTGAGC | + |
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Preference number: 4 (lower is better) Translates to: SWGTRPAAPGARWVAETHGLLLG*AWRPLS Trigger: GCTCAATGGTCGCCAGGCTCAGCCAAGCAGCAAGCC...ATGTGTCTCTGCAACCCATCTGGCCCCTGGTGCTGCTGGCCTGGTACCCCAACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS-3UTR GCA 90 bp | TACCAGGCCAGCAGCACCAGGGGCCAGATGGGTTGCAGAGACACATTTGGACACCGCTGGCAGGCTTGCTaGTTGGCTGAGCCTGGCGAC | + |
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Preference number: 4 (lower is better) Translates to: YQASSTRGQMGCRDTFGHRWQAC*LAEPGD Trigger: GTCGCCAGGCTCAGCCAAGCAGCAAGCCTGCCAGCG...GTGTCCAAATGTGTCTCTGCAACCCATCTGGCCCCTGGTGCTGCTGGCCTGGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS-3UTR TCA 90 bp | TTGGGGTACCAGGCCAGCAGCACCAGGGGCCAGATGGGTTGCAGAGACACATTTGCTGGAAGCAGCGGCTaGGGCTGGAGGGCTTACCAA | + |
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Preference number: 4 (lower is better) Translates to: LGYQASSTRGQMGCRDTFAGSSG*GWRAYQ Trigger: TTGGTAAGCCCTCCAGCCTCAGCCGCTGCTTCCAGC...AAATGTGTCTCTGCAACCCATCTGGCCCCTGGTGCTGCTGGCCTGGTACCCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058764.6 |
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| CDS-3UTR GCA 90 bp | TTGGGGTACCAGGCCAGCAGCACCAGGGGCCAGATGGGTTGCAGAGACACATTTGAGCAGGGAACTGGCTaGCAGCTGGCCATACGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LGYQASSTRGQMGCRDTFEQGTG*QLAIRW Trigger: CCACCGTATGGCCAGCTGGCAGCCAGTTCCCTGCTC...AAATGTGTCTCTGCAACCCATCTGGCCCCTGGTGCTGCTGGCCTGGTACCCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS-3UTR TCA 90 bp | TACCAGGCCAGCAGCACCAGGGGCCAGATGGGTTGCAGAGACACATTTGGACACCCGGAATCCACCACGTaGACTGCGGCCACGAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: YQASSTRGQMGCRDTFGHPESTT*TAATKE Trigger: TTCCTTCGTGGCCGCAGTTCACGTGGTGGATTCCGG...GTGTCCAAATGTGTCTCTGCAACCCATCTGGCCCCTGGTGCTGCTGGCCTGGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS-3UTR CCA 90 bp | ACCAGGCCAGCAGCACCAGGGGCCAGATGGGTTGCAGAGACACATTTGGACACCCAAAGGACCTCACTTTaGCGAGCGCCACGGTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: TRPAAPGARWVAETHLDTQRTSL*RAPRWS Trigger: ACTCCACCGTGGCGCTCGCCAAAGTGAGGTCCTTTG...GGTGTCCAAATGTGTCTCTGCAACCCATCTGGCCCCTGGTGCTGCTGGCCTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055485.12 |
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| CDS-3UTR CCA 90 bp | ACCAGGCCAGCAGCACCAGGGGCCAGATGGGTTGCAGAGACACATTTGGACACCGAAGCGGCATACTGCTaGCTGAGCAGGGAACTGGCT | + |
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Preference number: 4 (lower is better) Translates to: TRPAAPGARWVAETHLDTEAAYC*LSRELA Trigger: AGCCAGTTCCCTGCTCAGCCAGCAGTATGCCGCTTC...GGTGTCCAAATGTGTCTCTGCAACCCATCTGGCCCCTGGTGCTGCTGGCCTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS-3UTR CCA 90 bp | TTGGGGTACCAGGCCAGCAGCACCAGGGGCCAGATGGGTTGCAGAGACACATTTGGCAGGCTTGCTGCTTaGCTGAGCCTGGCGACCATT | + |
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Preference number: 4 (lower is better) Translates to: LGYQASSTRGQMGCRDTFGRLAA*LSLATI Trigger: AATGGTCGCCAGGCTCAGCCAAGCAGCAAGCCTGCC...AAATGTGTCTCTGCAACCCATCTGGCCCCTGGTGCTGCTGGCCTGGTACCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS-3UTR GCA 90 bp | GTAGTGTTGCCTTCTGTCCTTATCTTCAGGGCAGCACCTCTGCCTCTGCTGGACGAGCAGGGAACTGGCTaGCAGCTGGCCATACGGTGG | + |
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Preference number: 4 (lower is better) Translates to: VVLPSVLIFRAAPLPLLDEQGTG*QLAIRW Trigger: CCACCGTATGGCCAGCTGGCAGCCAGTTCCCTGCTC...GTCCAGCAGAGGCAGAGGTGCTGCCCTGAAGATAAGGACAGAAGGCAACACTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS-3UTR GCA 90 bp | ACCAGGCCAGCAGCACCAGGGGCCAGATGGGTTGCAGAGACACATTTGGACACCAAGGAAGCGGCATACTaGTGGCTGAGCAGGGAACTG | + |
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Preference number: 4 (lower is better) Translates to: TRPAAPGARWVAETHLDTKEAAY*WLSREL Trigger: CAGTTCCCTGCTCAGCCAGCAGTATGCCGCTTCCTT...GGTGTCCAAATGTGTCTCTGCAACCCATCTGGCCCCTGGTGCTGCTGGCCTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS-3UTR GCA 90 bp | TGCCCTGGCCCTCCCACCCCGTGTGACTGGCTCACCCTGTGCTGGCCCTGCCTGGTTGAACTGGGCATTTaGACTCTCAAAATCAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: CPGPPTPCDWLTLCWPCLVELGI*TLKIKV Trigger: GACTTTGATTTTGAGAGTGCAAATGCCCAGTTCAAC...CAGGCAGGGCCAGCACAGGGTGAGCCAGTCACACGGGGTGGGAGGGCCAGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS-3UTR CCA 90 bp | CTTCCCACTACTTCACTCATCCCGTTAGCCCCCAGCACTGAACATCACTGGTTCCAGCCTGCTCCACCATaGGGCTCTTGCCGACTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LPTTSLIPLAPSTEHHWFQPAPP*GSCRLG Trigger: CCCCAGTCGGCAAGAGCCCCATGGTGGAGCAGGCTG...GAACCAGTGATGTTCAGTGCTGGGGGCTAACGGGATGAGTGAAGTAGTGGGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS-3UTR TCA 90 bp | GTAGTGTTGCCTTCTGTCCTTATCTTCAGGGCAGCACCTCTGCCTCTGCTGGACGCTGTGTCGCCGAGGTaGCCTTGCTGGGCAACAGTT | + |
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Preference number: 4 (lower is better) Translates to: VVLPSVLIFRAAPLPLLDAVSPR*PCWATV Trigger: AACTGTTGCCCAGCAAGGTCACCTCGGCGACACAGC...GTCCAGCAGAGGCAGAGGTGCTGCCCTGAAGATAAGGACAGAAGGCAACACTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS-3UTR GCA 90 bp | GCCCTTCCCACTACTTCACTCATCCCGTTAGCCCCCAGCACTGAACATCACTGGGCAGTCTCTTCACTCTaGGCCATCACAGCTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALPTTSLIPLAPSTEHHWAVSSL*AITAGS Trigger: GGACCCAGCTGTGATGGCGCAGAGTGAAGAGACTGC...CCAGTGATGTTCAGTGCTGGGGGCTAACGGGATGAGTGAAGTAGTGGGAAGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR CCA 90 bp | GCCCTTCCCACTACTTCACTCATCCCGTTAGCCCCCAGCACTGAACATCACTGGCTGCGCCATCACAGCTaGGTCCTTCTCTTCCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ALPTTSLIPLAPSTEHHWLRHHS*VLLFPL Trigger: AAGGGGGAAGAGAAGGACCCAGCTGTGATGGCGCAG...CCAGTGATGTTCAGTGCTGGGGGCTAACGGGATGAGTGAAGTAGTGGGAAGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR TCA 90 bp | TACCAGGCCAGCAGCACCAGGGGCCAGATGGGTTGCAGAGACACATTTGGACACCAAGCTCCTCTCGGTTaGACTGGGCATTTGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: YQASSTRGQMGCRDTFGHQAPLG*TGHLHS Trigger: AGAGTGCAAATGCCCAGTTCAACCGAGAGGAGCTTG...GTGTCCAAATGTGTCTCTGCAACCCATCTGGCCCCTGGTGCTGCTGGCCTGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR TCA 90 bp | CTTCCCACTACTTCACTCATCCCGTTAGCCCCCAGCACTGAACATCACTGGTTCCCGGAATCCACCACGTaGACTGCGGCCACGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LPTTSLIPLAPSTEHHWFPESTT*TAATKE Trigger: TTCCTTCGTGGCCGCAGTTCACGTGGTGGATTCCGG...GAACCAGTGATGTTCAGTGCTGGGGGCTAACGGGATGAGTGAAGTAGTGGGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR TCA 90 bp | GTAGTGTTGCCTTCTGTCCTTATCTTCAGGGCAGCACCTCTGCCTCTGCTGGACCCCTTGCAAGTGAGCTaGGGTGGCTCTGAGGACATG | + |
|
Preference number: 4 (lower is better) Translates to: VVLPSVLIFRAAPLPLLDPLQVS*GGSEDM Trigger: CATGTCCTCAGAGCCACCTCAGCTCACTTGCAAGGG...GTCCAGCAGAGGCAGAGGTGCTGCCCTGAAGATAAGGACAGAAGGCAACACTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058764.6 |
||
| CDS-3UTR GCA 90 bp | GCCCTTCCCACTACTTCACTCATCCCGTTAGCCCCCAGCACTGAACATCACTGGAAGGAAGCGGCATACTaGTGGCTGAGCAGGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: ALPTTSLIPLAPSTEHHWKEAAY*WLSREL Trigger: CAGTTCCCTGCTCAGCCAGCAGTATGCCGCTTCCTT...CCAGTGATGTTCAGTGCTGGGGGCTAACGGGATGAGTGAAGTAGTGGGAAGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR TCA 90 bp | CTTCCCACTACTTCACTCATCCCGTTAGCCCCCAGCACTGAACATCACTGGTTCACGGTGGCATCCCTCTaGAGGGGCTGTAAGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: LPTTSLIPLAPSTEHHWFTVASL*RGCKAH Trigger: ATGTGCCTTACAGCCCCTTCAGAGGGATGCCACCGT...GAACCAGTGATGTTCAGTGCTGGGGGCTAACGGGATGAGTGAAGTAGTGGGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055485.12 |
||
| CDS-3UTR GCA 90 bp | GTAGTGTTGCCTTCTGTCCTTATCTTCAGGGCAGCACCTCTGCCTCTGCTGGACTTGAGTGTGCACAGGTaGCGGCTGGACTACATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VVLPSVLIFRAAPLPLLDLSVHR*RLDYIA Trigger: AGCGATGTAGTCCAGCCGGCACCTGTGCACACTCAA...GTCCAGCAGAGGCAGAGGTGCTGCCCTGAAGATAAGGACAGAAGGCAACACTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR GCA 90 bp | CTTCCCACTACTTCACTCATCCCGTTAGCCCCCAGCACTGAACATCACTGGTTCGCAGTCTCTTCACTCTaGGCCATCACAGCTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPTTSLIPLAPSTEHHWFAVSSL*AITAGS Trigger: GGACCCAGCTGTGATGGCGCAGAGTGAAGAGACTGC...GAACCAGTGATGTTCAGTGCTGGGGGCTAACGGGATGAGTGAAGTAGTGGGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR CCA 90 bp | CTTCCCACTACTTCACTCATCCCGTTAGCCCCCAGCACTGAACATCACTGGTTCCTGCGCCATCACAGCTaGGTCCTTCTCTTCCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPTTSLIPLAPSTEHHWFLRHHS*VLLFPL Trigger: AAGGGGGAAGAGAAGGACCCAGCTGTGATGGCGCAG...GAACCAGTGATGTTCAGTGCTGGGGGCTAACGGGATGAGTGAAGTAGTGGGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| 3UTR CAA 72 bp | CTTAAGTGCAGCCAGAGGCTGAAGCAGACAGGAAGGTaGGACACACCACACCACACGAGCTTGCCTTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LKCSQRLKQTGR*DTPHHTSLPWV Trigger: AACCCAAGGCAAGCTCGTGTGGTGTGGTGTGTCCAACCTTCCTGTCTGCTTCAGCCTCTGGCTGCACTTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR GCA 90 bp | CTTCCCACTACTTCACTCATCCCGTTAGCCCCCAGCACTGAACATCACTGGTTCTTGAGTGTGCACAGGTaGCGGCTGGACTACATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPTTSLIPLAPSTEHHWFLSVHR*RLDYIA Trigger: AGCGATGTAGTCCAGCCGGCACCTGTGCACACTCAA...GAACCAGTGATGTTCAGTGCTGGGGGCTAACGGGATGAGTGAAGTAGTGGGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR CCA 90 bp | GGTCGAGAAACCTTCAGAGGTCACCTACAAATACTTCCCCAAAACCAAGTGGTTCCAGTCCCAGCTCGGTaGGAAGTGGGGTTGCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GRETFRGHLQILPQNQVVPVPAR*EVGLRR Trigger: ACGGCGCAACCCCACTTCCCACCGAGCTGGGACTGG...AACCACTTGGTTTTGGGGAAGTATTTGTAGGTGACCTCTGAAGGTTTCTCGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR GCA 90 bp | CCAGTGCTATGTTCTACTCTCAGCTCTGAAGTCCTACACAAAGATAAAGCCAAGCGCTGGCAGGCTTGCTaGTTGGCTGAGCCTGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: PVLCSTLSSEVLHKDKAKRWQAC*LAEPGD Trigger: GTCGCCAGGCTCAGCCAAGCAGCAAGCCTGCCAGCG...CTTGGCTTTATCTTTGTGTAGGACTTCAGAGCTGAGAGTAGAACATAGCACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR CCA 90 bp | AGTTGGGGTACCAGGCCAGCAGCACCAGGGGCCAGATGGGTTGCAGAGACACATTTCCTTAACGTTAGTTaGACGGTTTTGTCCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SWGTRPAAPGARWVAETHFLNVS*TVLSSG Trigger: TCCAGAGGACAAAACCGTCCAACTAACGTTAAGGAA...ATGTGTCTCTGCAACCCATCTGGCCCCTGGTGCTGCTGGCCTGGTACCCCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR CCA 90 bp | CCAGTGCTATGTTCTACTCTCAGCTCTGAAGTCCTACACAAAGATAAAGCCAAGGGGGCTCTTGCCGACTaGGGTAGATGGGAACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PVLCSTLSSEVLHKDKAKGALAD*GRWEPS Trigger: GCTGGGTTCCCATCTACCCCAGTCGGCAAGAGCCCC...CTTGGCTTTATCTTTGTGTAGGACTTCAGAGCTGAGAGTAGAACATAGCACTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR CCA 90 bp | CTATTAGGCTGTGTGCAACCAAGAAGGAAATGTAGGTCGAGAAACCTTCAGAGGGGCAGGCTTGCTGCTTaGCTGAGCCTGGCGACCATT | + |
|
Preference number: 4 (lower is better) Translates to: LLGCVQPRRKCRSRNLQRGRLAA*LSLATI Trigger: AATGGTCGCCAGGCTCAGCCAAGCAGCAAGCCTGCC...CCTCTGAAGGTTTCTCGACCTACATTTCCTTCTTGGTTGCACACAGCCTAATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR TCA 90 bp | CCAGTGCTATGTTCTACTCTCAGCTCTGAAGTCCTACACAAAGATAAAGCCAAGGCTGTGTCGCCGAGGTaGCCTTGCTGGGCAACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PVLCSTLSSEVLHKDKAKAVSPR*PCWATV Trigger: AACTGTTGCCCAGCAAGGTCACCTCGGCGACACAGC...CTTGGCTTTATCTTTGTGTAGGACTTCAGAGCTGAGAGTAGAACATAGCACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR TCA 90 bp | CTGAAGTCCTACACAAAGATAAAGCCAAGCTTTCACGCTGTGGCTTCATCAGTACAGCTCCCTTGCAAGTaGGCTGAGGTGGCTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKSYTKIKPSFHAVASSVQLPCK*AEVALR Trigger: CCTCAGAGCCACCTCAGCTCACTTGCAAGGGAGCTG...TACTGATGAAGCCACAGCGTGAAAGCTTGGCTTTATCTTTGTGTAGGACTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058764.6 |
||
| CDS-3UTR GCA 90 bp | CTATTAGGCTGTGTGCAACCAAGAAGGAAATGTAGGTCGAGAAACCTTCAGAGGGGTGGGAAGTGGGGTTaGGCCGTGTTGTCCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLGCVQPRRKCRSRNLQRGGKWG*AVLSHF Trigger: GAAATGGGACAACACGGCGCAACCCCACTTCCCACC...CCTCTGAAGGTTTCTCGACCTACATTTCCTTCTTGGTTGCACACAGCCTAATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR CCA 90 bp | AGAAACCTTCAGAGGTCACCTACAAATACTTCCCCAAAACCAAGTGGTTCTAAACCAGTCCCAGCTCGGTaGGAAGTGGGGTTGCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RNLQRSPTNTSPKPSGSKPVPAR*EVGLRR Trigger: ACGGCGCAACCCCACTTCCCACCGAGCTGGGACTGG...TTTAGAACCACTTGGTTTTGGGGAAGTATTTGTAGGTGACCTCTGAAGGTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| 3UTR CAA 72 bp | GGTACACAAGGTTCACTTCTCCTGCTGACTGTAGTGTaGCCTTCTGTCCTTATCTTCAGGGCAGCACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTQGSLLLLTVV*PSVLIFRAAPL Trigger: CAGAGGTGCTGCCCTGAAGATAAGGACAGAAGGCAACACTACAGTCAGCAGGAGAAGTGAACCTTGTGTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR GCA 90 bp | CTGAAGTCCTACACAAAGATAAAGCCAAGCTTTCACGCTGTGGCTTCATCAGTACTAGTCTGGACAGCCTaGTCCACCATGGGGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LKSYTKIKPSFHAVASSVLVWTA*STMGLL Trigger: CAAGAGCCCCATGGTGGAGCAGGCTGTCCAGACTAG...TACTGATGAAGCCACAGCGTGAAAGCTTGGCTTTATCTTTGTGTAGGACTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR GCA 90 bp | CTGAAGTCCTACACAAAGATAAAGCCAAGCTTTCACGCTGTGGCTTCATCAGTAGGTGGGAAGTGGGGTTaGGCCGTGTTGTCCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKSYTKIKPSFHAVASSVGGKWG*AVLSHF Trigger: GAAATGGGACAACACGGCGCAACCCCACTTCCCACC...TACTGATGAAGCCACAGCGTGAAAGCTTGGCTTTATCTTTGTGTAGGACTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR CCA 90 bp | GTAGTGTTGCCTTCTGTCCTTATCTTCAGGGCAGCACCTCTGCCTCTGCTGGACTTCCTTAACGTTAGTTaGACGGTTTTGTCCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VVLPSVLIFRAAPLPLLDFLNVS*TVLSSG Trigger: TCCAGAGGACAAAACCGTCCAACTAACGTTAAGGAA...GTCCAGCAGAGGCAGAGGTGCTGCCCTGAAGATAAGGACAGAAGGCAACACTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR TCA 90 bp | CTATTAGGCTGTGTGCAACCAAGAAGGAAATGTAGGTCGAGAAACCTTCAGAGGCAAGCTCCTCTCGGTTaGACTGGGCATTTGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLGCVQPRRKCRSRNLQRQAPLG*TGHLHS Trigger: AGAGTGCAAATGCCCAGTTCAACCGAGAGGAGCTTG...CCTCTGAAGGTTTCTCGACCTACATTTCCTTCTTGGTTGCACACAGCCTAATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR CCA 90 bp | CTGAAGTCCTACACAAAGATAAAGCCAAGCTTTCACGCTGTGGCTTCATCAGTAGAGCAGGCCTGTCTGTaGGACGGTCTTCAGTACCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKSYTKIKPSFHAVASSVEQACL*DGLQYQ Trigger: TTGGTACTGAAGACCGTCCCACAGACAGGCCTGCTC...TACTGATGAAGCCACAGCGTGAAAGCTTGGCTTTATCTTTGTGTAGGACTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055485.12 |
||
| 3UTR CAA 72 bp | CTGTGGCTTTCTGAAGGGTTTGGGTTATCAAGGTGCTaGTTTTCAACAGTGCCCTGTCAGTCAGAGGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: LWLSEGFGLSRC*FSTVPCQSEDA Trigger: TGCATCCTCTGACTGACAGGGCACTGTTGAAAACAAGCACCTTGATAACCCAAACCCTTCAGAAAGCCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR TCA 90 bp | AGAAACCTTCAGAGGTCACCTACAAATACTTCCCCAAAACCAAGTGGTTCTAAAGGACATGTCAAGCTCTaGAACAGGCTGTGGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: RNLQRSPTNTSPKPSGSKGHVKL*NRLWRW Trigger: CCATCTCCACAGCCTGTTTCAGAGCTTGACATGTCC...TTTAGAACCACTTGGTTTTGGGGAAGTATTTGTAGGTGACCTCTGAAGGTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058764.6 |
||
| CDS-3UTR CCA 90 bp | CTATTAGGCTGTGTGCAACCAAGAAGGAAATGTAGGTCGAGAAACCTTCAGAGGTCCTCTCGGTTGAACTaGGCATTTGCACTCTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLGCVQPRRKCRSRNLQRSSRLN*AFALSK Trigger: TTTTGAGAGTGCAAATGCCCAGTTCAACCGAGAGGA...CCTCTGAAGGTTTCTCGACCTACATTTCCTTCTTGGTTGCACACAGCCTAATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR CCA 90 bp | GGTCGAGAAACCTTCAGAGGTCACCTACAAATACTTCCCCAAAACCAAGTGGTTTCCTCTCGGTTGAACTaGGCATTTGCACTCTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GRETFRGHLQILPQNQVVSSRLN*AFALSK Trigger: TTTTGAGAGTGCAAATGCCCAGTTCAACCGAGAGGA...AACCACTTGGTTTTGGGGAAGTATTTGTAGGTGACCTCTGAAGGTTTCTCGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR CCA 90 bp | AGAAACCTTCAGAGGTCACCTACAAATACTTCCCCAAAACCAAGTGGTTCTAAATCAACAGAACTAGTCTaGACAGCCTGCTCCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: RNLQRSPTNTSPKPSGSKSTELV*TACSTM Trigger: CATGGTGGAGCAGGCTGTCCAGACTAGTTCTGTTGA...TTTAGAACCACTTGGTTTTGGGGAAGTATTTGTAGGTGACCTCTGAAGGTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR GCA 90 bp | CTGAAGTCCTACACAAAGATAAAGCCAAGCTTTCACGCTGTGGCTTCATCAGTAGTTGAACTGGGCATTTaGACTCTCAAAATCAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LKSYTKIKPSFHAVASSVVELGI*TLKIKV Trigger: GACTTTGATTTTGAGAGTGCAAATGCCCAGTTCAAC...TACTGATGAAGCCACAGCGTGAAAGCTTGGCTTTATCTTTGTGTAGGACTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR TCA 90 bp | AGAAACCTTCAGAGGTCACCTACAAATACTTCCCCAAAACCAAGTGGTTCTAAACACTTCCCCGGAAAATaGTGTACTCATAAATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RNLQRSPTNTSPKPSGSKHFPGK*CTHKFP Trigger: AGGAAATTTATGAGTACATCATTTTCCGGGGAAGTG...TTTAGAACCACTTGGTTTTGGGGAAGTATTTGTAGGTGACCTCTGAAGGTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000055485.12 |
||
| CDS-3UTR CAA 90 bp | TGCCCTGGCCCTCCCACCCCGTGTGACTGGCTCACCCTGTGCTGGCCCTGCCTGTCCACCATGGGGCTCTaGCCGACTGGGGTAGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: CPGPPTPCDWLTLCWPCLSTMGL*PTGVDG Trigger: CCCATCTACCCCAGTCGGCAAGAGCCCCATGGTGGA...CAGGCAGGGCCAGCACAGGGTGAGCCAGTCACACGGGGTGGGAGGGCCAGGGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR CAA 90 bp | TGCCCTGGCCCTCCCACCCCGTGTGACTGGCTCACCCTGTGCTGGCCCTGCCTGTCAAGCTCCTCTCGGTaGAACTGGGCATTTGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: CPGPPTPCDWLTLCWPCLSSSSR*NWAFAL Trigger: GAGTGCAAATGCCCAGTTCAACCGAGAGGAGCTTGA...CAGGCAGGGCCAGCACAGGGTGAGCCAGTCACACGGGGTGGGAGGGCCAGGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS GCA 90 bp | CAGCTCGGTGGGAAGTGGGGTTGCGCCGTGTTGTCCCATTTCCTCTaGCTCCCCGGAATCCACCACGTGAACTGCGGCCACGAAGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: QLGGKWGCAVLSHFL*LPGIHHVNCGHEGT Trigger: GGTTCCTTCGTGGCCGCAGTTCACGTGGTGGATTCCGGGGAGGCAGAGGAAATGGGACAACACGGCGCAACCCCACTTCCCACCGAGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS CCA 90 bp | GTGCACAGGTGCCGGCTGGACTACATCGCTGGCAGGCTTGCTGCTTaGCTGAGCCTGGCGACCATTGAGCTGTGTCGCCGAGGTGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: VHRCRLDYIAGRLAA*LSLATIELCRRGDL Trigger: AAGGTCACCTCGGCGACACAGCTCAATGGTCGCCAGGCTCAGCCAAGCAGCAAGCCTGCCAGCGATGTAGTCCAGCCGGCACCTGTGCAC 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS GCA 90 bp | GGGGTAGATGGGAACCCAGCTCCTAGACCTAAGGAAGCGGCATACTaGTGGCTGAGCAGGGAACTGGCTGCCAGCTGGCCATACGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GVDGNPAPRPKEAAY*WLSRELAASWPYGG Trigger: GCCACCGTATGGCCAGCTGGCAGCCAGTTCCCTGCTCAGCCAGCAGTATGCCGCTTCCTTAGGTCTAGGAGCTGGGTTCCCATCTACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055485.12 |
||
| CDS CCA 90 bp | ATACTGCTGGCTGAGCAGGGAACTGGCTGCCAGCTGGCCATACGGTaGCATCCCTCTGAAGGGGCTGTAAGGCACATGCGGCTGGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ILLAEQGTGCQLAIR*HPSEGAVRHMRLEG Trigger: CCCTTCCAGCCGCATGTGCCTTACAGCCCCTTCAGAGGGATGCCACCGTATGGCCAGCTGGCAGCCAGTTCCCTGCTCAGCCAGCAGTAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055485.12 |
||
| CDS TCA 90 bp | ATGGGAACCCAGCTCCTAGACCTAAGGAAGCGGCATACTGCTGGCTaGGCAGGGAACTGGCTGCCAGCTGGCCATACGGTGGCATCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: MGTQLLDLRKRHTAG*AGNWLPAGHTVASL Trigger: GAGGGATGCCACCGTATGGCCAGCTGGCAGCCAGTTCCCTGCTCAGCCAGCAGTATGCCGCTTCCTTAGGTCTAGGAGCTGGGTTCCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055485.12 |
||
| CDS-3UTR CAA 90 bp | TGCCCTGGCCCTCCCACCCCGTGTGACTGGCTCACCCTGTGCTGGCCCTGCCTGGTTAGTTGGACGGTTTaGTCCTCTGGAACGATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CPGPPTPCDWLTLCWPCLVSWTV*SSGTIS Trigger: AGAAATCGTTCCAGAGGACAAAACCGTCCAACTAAC...CAGGCAGGGCCAGCACAGGGTGAGCCAGTCACACGGGGTGGGAGGGCCAGGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS TCA 90 bp | GACCGCCTCCGTGGAGGTCTTCTGTTCTCATCATTCACCTGCCCTTaGGTGTGCACAGGTGCCGGCTGGACTACATCGCTGGCAGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: DRLRGGLLFSSFTCP*VCTGAGWTTSLAGL Trigger: CAAGCCTGCCAGCGATGTAGTCCAGCCGGCACCTGTGCACACTCAAGGGCAGGTGAATGATGAGAACAGAAGACCTCCACGGAGGCGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS CCA 90 bp | AGAACTAGTCTGGACAGCCTGCTCCACCATGGGGCTCTTGCCGACTaGGGTAGATGGGAACCCAGCTCCCTTGCAAGTGAGCTGAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RTSLDSLLHHGALAD*GRWEPSSLASELRW Trigger: CCACCTCAGCTCACTTGCAAGGGAGCTGGGTTCCCATCTACCCCAGTCGGCAAGAGCCCCATGGTGGAGCAGGCTGTCCAGACTAGTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058764.6 |
||
| CDS-3UTR CAA 90 bp | AGTTGGGGTACCAGGCCAGCAGCACCAGGGGCCAGATGGGTTGCAGAGACACATATCATTCACCTGCCCTaGAGTGTGCACAGGTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SWGTRPAAPGARWVAETHIIHLP*SVHRCR Trigger: CCGGCACCTGTGCACACTCAAGGGCAGGTGAATGAT...ATGTGTCTCTGCAACCCATCTGGCCCCTGGTGCTGCTGGCCTGGTACCCCAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS GCA 90 bp | AGGTCTTCTGTTCTCATCATTCACCTGCCCTTGAGTGTGCACAGGTaGCGGCTGGACTACATCGCTGGCAGGCTTGCTGCTTGGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RSSVLIIHLPLSVHR*RLDYIAGRLAAWLS Trigger: GCTCAGCCAAGCAGCAAGCCTGCCAGCGATGTAGTCCAGCCGGCACCTGTGCACACTCAAGGGCAGGTGAATGATGAGAACAGAAGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR CAA 90 bp | CTTCCCACTACTTCACTCATCCCGTTAGCCCCCAGCACTGAACATCACTGGTTCTCCACCATGGGGCTCTaGCCGACTGGGGTAGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: LPTTSLIPLAPSTEHHWFSTMGL*PTGVDG Trigger: CCCATCTACCCCAGTCGGCAAGAGCCCCATGGTGGA...GAACCAGTGATGTTCAGTGCTGGGGGCTAACGGGATGAGTGAAGTAGTGGGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR CAA 90 bp | TGCCCTGGCCCTCCCACCCCGTGTGACTGGCTCACCCTGTGCTGGCCCTGCCTGAAGTCACCTTCAAACTaGATTGTGTTTTCCTTAACG | + |
|
Preference number: 5 (lower is better) Translates to: CPGPPTPCDWLTLCWPCLKSPSN*IVFSLT Trigger: CGTTAAGGAAAACACAATCAAGTTTGAAGGTGACTT...CAGGCAGGGCCAGCACAGGGTGAGCCAGTCACACGGGGTGGGAGGGCCAGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR CAA 90 bp | GTAGTGTTGCCTTCTGTCCTTATCTTCAGGGCAGCACCTCTGCCTCTGCTGGACCGGTGGGAAGTGGGGTaGCGCCGTGTTGTCCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: VVLPSVLIFRAAPLPLLDRWEVG*RRVVPF Trigger: AAATGGGACAACACGGCGCAACCCCACTTCCCACCG...GTCCAGCAGAGGCAGAGGTGCTGCCCTGAAGATAAGGACAGAAGGCAACACTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS GCA 90 bp | GTGTTGTCCCATTTCCTCTGCCTCCCCGGAATCCACCACGTGAACTaGGGCCACGAAGGAACCTCCCTGACACTCCAAAAGTCTCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VLSHFLCLPGIHHVN*GHEGTSLTLQKSQC Trigger: ACACTGAGACTTTTGGAGTGTCAGGGAGGTTCCTTCGTGGCCGCAGTTCACGTGGTGGATTCCGGGGAGGCAGAGGAAATGGGACAACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR CAA 90 bp | GCCCTTCCCACTACTTCACTCATCCCGTTAGCCCCCAGCACTGAACATCACTGGTCAAGCTCCTCTCGGTaGAACTGGGCATTTGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: ALPTTSLIPLAPSTEHHWSSSSR*NWAFAL Trigger: GAGTGCAAATGCCCAGTTCAACCGAGAGGAGCTTGA...CCAGTGATGTTCAGTGCTGGGGGCTAACGGGATGAGTGAAGTAGTGGGAAGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR CAA 90 bp | AGTTGGGGTACCAGGCCAGCAGCACCAGGGGCCAGATGGGTTGCAGAGACACATAGTTCAGAAGAGATGTaGTCAAAGAAGGACTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SWGTRPAAPGARWVAETHSSEEM*SKKDLD Trigger: GTCCAAGTCCTTCTTTGACAACATCTCTTCTGAACT...ATGTGTCTCTGCAACCCATCTGGCCCCTGGTGCTGCTGGCCTGGTACCCCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR CAA 90 bp | CTGAAGTCCTACACAAAGATAAAGCCAAGCTTTCACGCTGTGGCTTCATCAGTACCAAAGGACCTCACTTaGGCGAGCGCCACGGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LKSYTKIKPSFHAVASSVPKDLT*ASATVE Trigger: CTCCACCGTGGCGCTCGCCAAAGTGAGGTCCTTTGG...TACTGATGAAGCCACAGCGTGAAAGCTTGGCTTTATCTTTGTGTAGGACTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055485.12 |
||
| CDS-3UTR CAA 90 bp | TTGGGGTACCAGGCCAGCAGCACCAGGGGCCAGATGGGTTGCAGAGACACATTTAGTTCAGAAGAGATGTaGTCAAAGAAGGACTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LGYQASSTRGQMGCRDTFSSEEM*SKKDLD Trigger: GTCCAAGTCCTTCTTTGACAACATCTCTTCTGAACT...AAATGTGTCTCTGCAACCCATCTGGCCCCTGGTGCTGCTGGCCTGGTACCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS GCA 90 bp | AGTTTCTTAGCATTCAAGTTATCAACAGAACTAGTCTGGACAGCCTaGTCCACCATGGGGCTCTTGCCGACTGGGGTAGATGGGAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: SFLAFKLSTELVWTA*STMGLLPTGVDGNP Trigger: TGGGTTCCCATCTACCCCAGTCGGCAAGAGCCCCATGGTGGAGCAGGCTGTCCAGACTAGTTCTGTTGATAACTTGAATGCTAAGAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS CCA 90 bp | CTGGGCAACAGTTTCTTAGCATTCAAGTTATCAACAGAACTAGTCTaGACAGCCTGCTCCACCATGGGGCTCTTGCCGACTGGGGTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LGNSFLAFKLSTELV*TACSTMGLLPTGVD Trigger: ATCTACCCCAGTCGGCAAGAGCCCCATGGTGGAGCAGGCTGTCCAGACTAGTTCTGTTGATAACTTGAATGCTAAGAAACTGTTGCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR CAA 90 bp | GCCCTTCCCACTACTTCACTCATCCCGTTAGCCCCCAGCACTGAACATCACTGGCACACAGTAATATCCTaGATATCACTTCCCCGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: ALPTTSLIPLAPSTEHHWHTVIS*ISLPRK Trigger: TTTCCGGGGAAGTGATATCAAGGATATTACTGTGTG...CCAGTGATGTTCAGTGCTGGGGGCTAACGGGATGAGTGAAGTAGTGGGAAGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055485.12 |
||
| CDS-3UTR CAA 90 bp | AGTTGGGGTACCAGGCCAGCAGCACCAGGGGCCAGATGGGTTGCAGAGACACATAAGTCACCTTCAAACTaGATTGTGTTTTCCTTAACG | + |
|
Preference number: 5 (lower is better) Translates to: SWGTRPAAPGARWVAETHKSPSN*IVFSLT Trigger: CGTTAAGGAAAACACAATCAAGTTTGAAGGTGACTT...ATGTGTCTCTGCAACCCATCTGGCCCCTGGTGCTGCTGGCCTGGTACCCCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS CCA 90 bp | AAGATCCTCCTCAGCAGCAGTCTCTTCACTCTGCGCCATCACAGCTaGGTCCTTCTCTTCCCCCTTGTCGGCTTTGTCATCTTTAAAATT | + |
|
Preference number: 5 (lower is better) Translates to: KILLSSSLFTLRHHS*VLLFPLVGFVIFKI Trigger: AATTTTAAAGATGACAAAGCCGACAAGGGGGAAGAGAAGGACCCAGCTGTGATGGCGCAGAGTGAAGAGACTGCTGCTGAGGAGGATCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS-3UTR CAA 90 bp | GGTCGAGAAACCTTCAGAGGTCACCTACAAATACTTCCCCAAAACCAAGTGGTTGTTAGTTGGACGGTTTaGTCCTCTGGAACGATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GRETFRGHLQILPQNQVVVSWTV*SSGTIS Trigger: AGAAATCGTTCCAGAGGACAAAACCGTCCAACTAAC...AACCACTTGGTTTTGGGGAAGTATTTGTAGGTGACCTCTGAAGGTTTCTCGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS-3UTR CAA 90 bp | CCAGTGCTATGTTCTACTCTCAGCTCTGAAGTCCTACACAAAGATAAAGCCAAGTCCTTCTCTTCCCCCTaGTCGGCTTTGTCATCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: PVLCSTLSSEVLHKDKAKSFSSP*SALSSL Trigger: TAAAGATGACAAAGCCGACAAGGGGGAAGAGAAGGA...CTTGGCTTTATCTTTGTGTAGGACTTCAGAGCTGAGAGTAGAACATAGCACTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR CAA 90 bp | CTATTAGGCTGTGTGCAACCAAGAAGGAAATGTAGGTCGAGAAACCTTCAGAGGTCCCCCTTGTCGGCTTaGTCATCTTTAAAATTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LLGCVQPRRKCRSRNLQRSPLSA*SSLKFS Trigger: ACTGAATTTTAAAGATGACAAAGCCGACAAGGGGGA...CCTCTGAAGGTTTCTCGACCTACATTTCCTTCTTGGTTGCACACAGCCTAATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS-3UTR CAA 90 bp | CTGAAGTCCTACACAAAGATAAAGCCAAGCTTTCACGCTGTGGCTTCATCAGTATCCCCCTTGTCGGCTTaGTCATCTTTAAAATTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LKSYTKIKPSFHAVASSVSPLSA*SSLKFS Trigger: ACTGAATTTTAAAGATGACAAAGCCGACAAGGGGGA...TACTGATGAAGCCACAGCGTGAAAGCTTGGCTTTATCTTTGTGTAGGACTTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS-3UTR CAA 90 bp | AGAAACCTTCAGAGGTCACCTACAAATACTTCCCCAAAACCAAGTGGTTCTAAATCCTTCTCTTCCCCCTaGTCGGCTTTGTCATCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: RNLQRSPTNTSPKPSGSKSFSSP*SALSSL Trigger: TAAAGATGACAAAGCCGACAAGGGGGAAGAGAAGGA...TTTAGAACCACTTGGTTTTGGGGAAGTATTTGTAGGTGACCTCTGAAGGTTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS CCA 90 bp | ATCAAAGTCACCTTCAAACTTGATTGTGTTTTCCTTAACGTTAGTTaGACGGTTTTGTCCTCTGGAACGATTTCTTGTTCTCCGATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: IKVTFKLDCVFLNVS*TVLSSGTISCSPIA Trigger: GGCAATCGGAGAACAAGAAATCGTTCCAGAGGACAAAACCGTCCAACTAACGTTAAGGAAAACACAATCAAGTTTGAAGGTGACTTTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS GCA 90 bp | CTTCTTAAACTCTTTATCAAGCTCCTCTCGGTTGAACTGGGCATTTaGACTCTCAAAATCAAAGTCACCTTCAAACTTGATTGTGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLKLFIKLLSVELGI*TLKIKVTFKLDCVF Trigger: GAAAACACAATCAAGTTTGAAGGTGACTTTGATTTTGAGAGTGCAAATGCCCAGTTCAACCGAGAGGAGCTTGATAAAGAGTTTAAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS CAA 72 bp | TATACCCGGCCAGTCCCAGCTCGGTGGGAAGTGGGGTaGCGCCGTGTTGTCCCATTTCCTCTGCCTCCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: YTRPVPARWEVG*RRVVPFPLPPR Trigger: CCGGGGAGGCAGAGGAAATGGGACAACACGGCGCAACCCCACTTCCCACCGAGCTGGGACTGGCCGGGTATA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS TCA 72 bp | AACTGGCTGCCAGCTGGCCATACGGTGGCATCCCTCTaGAGGGGCTGTAAGGCACATGCGGCTGGAAGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: NWLPAGHTVASL*RGCKAHAAGRA Trigger: CGCCCTTCCAGCCGCATGTGCCTTACAGCCCCTTCAGAGGGATGCCACCGTATGGCCAGCTGGCAGCCAGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055485.12 |
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| CDS TCA 72 bp | GGCTGGACTACATCGCTGGCAGGCTTGCTGCTTGGCTaGGCCTGGCGACCATTGAGCTGTGTCGCCGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GWTTSLAGLLLG*AWRPLSCVAEV Trigger: CACCTCGGCGACACAGCTCAATGGTCGCCAGGCTCAGCCAAGCAGCAAGCCTGCCAGCGATGTAGTCCAGCC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS GCA 72 bp | GGAAGCGGCATACTGCTGGCTGAGCAGGGAACTGGCTaGCAGCTGGCCATACGGTGGCATCCCTCTGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GSGILLAEQGTG*QLAIRWHPSEG Trigger: CCCTTCAGAGGGATGCCACCGTATGGCCAGCTGGCAGCCAGTTCCCTGCTCAGCCAGCAGTATGCCGCTTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055485.12 |
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| CDS GCA 72 bp | GGGAAGTGGGGTTGCGCCGTGTTGTCCCATTTCCTCTaGCTCCCCGGAATCCACCACGTGAACTGCGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GKWGCAVLSHFL*LPGIHHVNCGH Trigger: GTGGCCGCAGTTCACGTGGTGGATTCCGGGGAGGCAGAGGAAATGGGACAACACGGCGCAACCCCACTTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS CCA 72 bp | GCTGAGCAGGGAACTGGCTGCCAGCTGGCCATACGGTaGCATCCCTCTGAAGGGGCTGTAAGGCACATGCGG | + |
|
Preference number: 6 (lower is better) Translates to: AEQGTGCQLAIR*HPSEGAVRHMR Trigger: CCGCATGTGCCTTACAGCCCCTTCAGAGGGATGCCACCGTATGGCCAGCTGGCAGCCAGTTCCCTGCTCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055485.12 |
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| CDS CAA 72 bp | CAGTCCCAGCTCGGTGGGAAGTGGGGTTGCGCCGTGTaGTCCCATTTCCTCTGCCTCCCCGGAATCCACCAC | + |
|
Preference number: 6 (lower is better) Translates to: QSQLGGKWGCAV*SHFLCLPGIHH Trigger: GTGGTGGATTCCGGGGAGGCAGAGGAAATGGGACAACACGGCGCAACCCCACTTCCCACCGAGCTGGGACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS CAA 90 bp | ATACCCGGCCAGTCCCAGCTCGGTGGGAAGTGGGGTTGCGCCGTGTaGTCCCATTTCCTCTGCCTCCCCGGAATCCACCACGTGAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: IPGQSQLGGKWGCAV*SHFLCLPGIHHVNC Trigger: GCAGTTCACGTGGTGGATTCCGGGGAGGCAGAGGAAATGGGACAACACGGCGCAACCCCACTTCCCACCGAGCTGGGACTGGCCGGGTAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS GCA 72 bp | GGGAACCCAGCTCCTAGACCTAAGGAAGCGGCATACTaGTGGCTGAGCAGGGAACTGGCTGCCAGCTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GNPAPRPKEAAY*WLSRELAASWP Trigger: TGGCCAGCTGGCAGCCAGTTCCCTGCTCAGCCAGCAGTATGCCGCTTCCTTAGGTCTAGGAGCTGGGTTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055485.12 |
||
| CDS CCA 72 bp | CTTGAGTGTGCACAGGTGCCGGCTGGACTACATCGCTaGCAGGCTTGCTGCTTGGCTGAGCCTGGCGACCAT | + |
|
Preference number: 6 (lower is better) Translates to: LECAQVPAGLHR*QACCLAEPGDH Trigger: ATGGTCGCCAGGCTCAGCCAAGCAGCAAGCCTGCCAGCGATGTAGTCCAGCCGGCACCTGTGCACACTCAAG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS CCA 72 bp | CTGCTCCACCATGGGGCTCTTGCCGACTGGGGTAGATaGGAACCCAGCTCCCTTGCAAGTGAGCTGAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LLHHGALADWGR*EPSSLASELRW Trigger: CCACCTCAGCTCACTTGCAAGGGAGCTGGGTTCCCATCTACCCCAGTCGGCAAGAGCCCCATGGTGGAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058764.6 |
||
| CDS CCA 72 bp | CTGGACAGCCTGCTCCACCATGGGGCTCTTGCCGACTaGGGTAGATGGGAACCCAGCTCCCTTGCAAGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LDSLLHHGALAD*GRWEPSSLASE Trigger: CTCACTTGCAAGGGAGCTGGGTTCCCATCTACCCCAGTCGGCAAGAGCCCCATGGTGGAGCAGGCTGTCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058764.6 |
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| CDS TCA 72 bp | CAGCTCCTAGACCTAAGGAAGCGGCATACTGCTGGCTaGGCAGGGAACTGGCTGCCAGCTGGCCATACGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QLLDLRKRHTAG*AGNWLPAGHTV Trigger: CACCGTATGGCCAGCTGGCAGCCAGTTCCCTGCTCAGCCAGCAGTATGCCGCTTCCTTAGGTCTAGGAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055485.12 |
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| CDS CAA 72 bp | GAACTAGTCTGGACAGCCTGCTCCACCATGGGGCTCTaGCCGACTGGGGTAGATGGGAACCCAGCTCCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: ELVWTACSTMGL*PTGVDGNPAPR Trigger: TCTAGGAGCTGGGTTCCCATCTACCCCAGTCGGCAAGAGCCCCATGGTGGAGCAGGCTGTCCAGACTAGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055485.12 |
||
| CDS TCA 72 bp | ACTTCTCTAGACCTAAGGAAGCGGCATACTGCTGGCTaGGCAGGGAACTGGCTGCCAGCTGGCCATACGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TSLDLRKRHTAG*AGNWLPAGHTV Trigger: CACCGTATGGCCAGCTGGCAGCCAGTTCCCTGCTCAGCCAGCAGTATGCCGCTTCCTTAGGTCTAGAGAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058764.6 |
||
| CDS GCA 72 bp | GTTCTCATCATTCACCTGCCCTTGAGTGTGCACAGGTaGCGGCTGGACTACATCGCTGGCAGGCTTGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: VLIIHLPLSVHR*RLDYIAGRLAA Trigger: AGCAGCAAGCCTGCCAGCGATGTAGTCCAGCCGGCACCTGTGCACACTCAAGGGCAGGTGAATGATGAGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS GCA 72 bp | CCCAGAAGATCCTCCTCAGCAGCAGTCTCTTCACTCTaGGCCATCACAGCTGGGTCCTTCTCTTCCCCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PRRSSSAAVSSL*AITAGSFSSPL Trigger: CAAGGGGGAAGAGAAGGACCCAGCTGTGATGGCGCAGAGTGAAGAGACTGCTGCTGAGGAGGATCTTCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS GCA 72 bp | CATTTCCTCTGCCTCCCCGGAATCCACCACGTGAACTaGGGCCACGAAGGAACCTCCCTGACACTCCAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: HFLCLPGIHHVN*GHEGTSLTLQK Trigger: CTTTTGGAGTGTCAGGGAGGTTCCTTCGTGGCCGCAGTTCACGTGGTGGATTCCGGGGAGGCAGAGGAAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS CAA 90 bp | TTATCAACAGAACTAGTCTGGACAGCCTGCTCCACCATGGGGCTCTaGCCGACTGGGGTAGATGGGAACCCAGCTCCCTTGCAAGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LSTELVWTACSTMGL*PTGVDGNPAPLQVS Trigger: GCTCACTTGCAAGGGAGCTGGGTTCCCATCTACCCCAGTCGGCAAGAGCCCCATGGTGGAGCAGGCTGTCCAGACTAGTTCTGTTGATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058764.6 |
||
| CDS GCA 72 bp | CTTACCAACTTCTCTAGACCTAAGGAAGCGGCATACTaGTGGCTGAGCAGGGAACTGGCTGCCAGCTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LTNFSRPKEAAY*WLSRELAASWP Trigger: TGGCCAGCTGGCAGCCAGTTCCCTGCTCAGCCAGCAGTATGCCGCTTCCTTAGGTCTAGAGAAGTTGGTAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058764.6 |
||
| CDS CAA 72 bp | CCGTGGAGGTCTTCTGTTCTCATCATTCACCTGCCCTaGAGTGTGCACAGGTGCCGGCTGGACTACATCGCT | + |
|
Preference number: 6 (lower is better) Translates to: PWRSSVLIIHLP*SVHRCRLDYIA Trigger: AGCGATGTAGTCCAGCCGGCACCTGTGCACACTCAAGGGCAGGTGAATGATGAGAACAGAAGACCTCCACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS TCA 72 bp | GGGGTAGATGGGAACCCAGCTCCCTTGCAAGTGAGCTaGGGTGGCTCTGAGGACATGTCAAGCTCTGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: GVDGNPAPLQVS*GGSEDMSSSET Trigger: TGTTTCAGAGCTTGACATGTCCTCAGAGCCACCTCAGCTCACTTGCAAGGGAGCTGGGTTCCCATCTACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058764.6 |
||
| CDS CAA 90 bp | TTATCAACAGAACTAGTCTGGACAGCCTGCTCCACCATGGGGCTCTaGCCGACTGGGGTAGATGGGAACCCAGCTCCTAGACCTAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LSTELVWTACSTMGL*PTGVDGNPAPRPKE Trigger: TTCCTTAGGTCTAGGAGCTGGGTTCCCATCTACCCCAGTCGGCAAGAGCCCCATGGTGGAGCAGGCTGTCCAGACTAGTTCTGTTGATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055485.12 |
||
| CDS GCA 72 bp | GCATTCAAGTTATCAACAGAACTAGTCTGGACAGCCTaGTCCACCATGGGGCTCTTGCCGACTGGGGTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: AFKLSTELVWTA*STMGLLPTGVD Trigger: ATCTACCCCAGTCGGCAAGAGCCCCATGGTGGAGCAGGCTGTCCAGACTAGTTCTGTTGATAACTTGAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
||
| CDS CCA 72 bp | CATAAATTTCCTCTCTTGGGGGAGCAGGCCTGTCTGTaGGACGGTCTTCAGTACCAAAGGACCTCACTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: HKFPLLGEQACL*DGLQYQRTSLW Trigger: CCAAAGTGAGGTCCTTTGGTACTGAAGACCGTCCCACAGACAGGCCTGCTCCCCCAAGAGAGGAAATTTATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055485.12 |
||
| CDS CAA 72 bp | CGGTTTTGTCCTCTGGAACGATTTCTTGTTCTCCGATaGCCTGACCGCCTCCGTGGAGGTCTTCTGTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: RFCPLERFLVLR*PDRLRGGLLFS Trigger: TGAGAACAGAAGACCTCCACGGAGGCGGTCAGGCAATCGGAGAACAAGAAATCGTTCCAGAGGACAAAACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS GCA 72 bp | GGTTTTGTCCTCTGGAACGATTTCTTGTTCTCCGATTaGCTGACCGCCTCCGTGGAGGTCTTCTGTTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: GFVLWNDFLFSD*LTASVEVFCSH Trigger: ATGAGAACAGAAGACCTCCACGGAGGCGGTCAGGCAATCGGAGAACAAGAAATCGTTCCAGAGGACAAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS TCA 72 bp | TTGTCCTCTGGAACGATTTCTTGTTCTCCGATTGCCTaGCCGCCTCCGTGGAGGTCTTCTGTTCTCATCATT | + |
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Preference number: 6 (lower is better) Translates to: LSSGTISCSPIA*PPPWRSSVLII Trigger: AATGATGAGAACAGAAGACCTCCACGGAGGCGGTCAGGCAATCGGAGAACAAGAAATCGTTCCAGAGGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS CCA 72 bp | AGTTTCTTAGCATTCAAGTTATCAACAGAACTAGTCTaGACAGCCTGCTCCACCATGGGGCTCTTGCCGACT | + |
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Preference number: 6 (lower is better) Translates to: SFLAFKLSTELV*TACSTMGLLPT Trigger: AGTCGGCAAGAGCCCCATGGTGGAGCAGGCTGTCCAGACTAGTTCTGTTGATAACTTGAATGCTAAGAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS CAA 72 bp | CTCTGCGCCATCACAGCTGGGTCCTTCTCTTCCCCCTaGTCGGCTTTGTCATCTTTAAAATTCAGTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LCAITAGSFSSP*SALSSLKFSFF Trigger: GAAGAAACTGAATTTTAAAGATGACAAAGCCGACAAGGGGGAAGAGAAGGACCCAGCTGTGATGGCGCAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS CAA 72 bp | GGACTGAACAATAGCAGGATCCTGAGGGAGTGTATGTaGAGCTTTTGGAGGTTCGCACACAGTAATATCCTT | + |
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Preference number: 6 (lower is better) Translates to: GLNNSRILRECM*SFWRFAHSNIL Trigger: AAGGATATTACTGTGTGCGAACCTCCAAAAGCTCAACATACACTCCCTCAGGATCCTGCTATTGTTCAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055485.12 |
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| CDS CAA 90 bp | TTCAGCTTTCTCTCTTCAGCCCATGTTGTCCGCCTAGAACTGGTTTaGAGTTCAGAAGAGATGTTGTCAAAGAAGGACTTGGACTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: FSFLSSAHVVRLELV*SSEEMLSKKDLDLS Trigger: TGACAAGTCCAAGTCCTTCTTTGACAACATCTCTTCTGAACTCAAAACCAGTTCTAGGCGGACAACATGGGCTGAAGAGAGAAAGCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS CCA 72 bp | AATAGCAGGATCCTGAGGGAGTGTATGTTGAGCTTTTaGAGGTTCGCACACAGTAATATCCTTGATATCACT | + |
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Preference number: 6 (lower is better) Translates to: NSRILRECMLSF*RFAHSNILDIT Trigger: AGTGATATCAAGGATATTACTGTGTGCGAACCTCCAAAAGCTCAACATACACTCCCTCAGGATCCTGCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055485.12 |
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| CDS CAA 72 bp | CTTGATTGTGTTTTCCTTAACGTTAGTTGGACGGTTTaGTCCTCTGGAACGATTTCTTGTTCTCCGATTGCC | + |
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Preference number: 6 (lower is better) Translates to: LDCVFLNVSWTV*SSGTISCSPIA Trigger: GGCAATCGGAGAACAAGAAATCGTTCCAGAGGACAAAACCGTCCAACTAACGTTAAGGAAAACACAATCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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| CDS GCA 72 bp | CTCTTTATCAAGCTCCTCTCGGTTGAACTGGGCATTTaGACTCTCAAAATCAAAGTCACCTTCAAACTTGAT | + |
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Preference number: 6 (lower is better) Translates to: LFIKLLSVELGI*TLKIKVTFKLD Trigger: ATCAAGTTTGAAGGTGACTTTGATTTTGAGAGTGCAAATGCCCAGTTCAACCGAGAGGAGCTTGATAAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055485.12 ENSMUST00000058764.6 |
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