Pregenerated sensors for LSM11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044847Ensembl transcript IDs: ENSMUST00000062458.6, ENSMUST00000129820.8
Found 227 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAGGACAACAAGCCACCACGAGTGCGGTACAGCCCCGGCTGGTGTaGCATGTGCAGAGGCCACCTCTGGTGAGGGGCAGACAAGCTTCC | + |
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Preference number: 1 (lower is better) Translates to: RGQQATTSAVQPRLV*HVQRPPLVRGRQAS Trigger: GGAAGCTTGTCTGCCCCTCACCAGAGGTGGCCTCTGCACATGGCACACCAGCCGGGGCTGTACCGCACTCGTGGTGGCTTGTTGTCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR TCA 90 bp | ATGGCTTCTGCCTGGTTAGTCCTGCTGACCTGTCCTTCCAGAGGGTaGGCCAGCTCTGTGCCCTGCATGGGCAGGACCAGCGGGACTCAC | + |
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Preference number: 1 (lower is better) Translates to: MASAWLVLLTCPSRG*ASSVPCMGRTSGTH Trigger: GTGAGTCCCGCTGGTCCTGCCCATGCAGGGCACAGAGCTGGCTCACCCTCTGGAAGGACAGGTCAGCAGGACTAACCAGGCAGAAGCCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| 3UTR TCA 90 bp | CTGGAGACTCGAGCAGCCAGTGACAGCCCGTCAGAGCCTGTCCTGTaGATGGCTTCTGCCTGGTTAGTCCTGCTGACCTGTCCTTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: LETRAASDSPSEPVL*MASAWLVLLTCPSR Trigger: TCTGGAAGGACAGGTCAGCAGGACTAACCAGGCAGAAGCCATTCACAGGACAGGCTCTGACGGGCTGTCACTGGCTGCTCGAGTCTCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| 3UTR CCA 90 bp | ACGGCGGAGCCACAGGGTGAGAGGTCGCCTCTTCAGTTGGAGCATTaGCAGGCAGAGGCAGGCAGATCTGTGTTTGAAACTAGCCTGGTT | + |
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Preference number: 1 (lower is better) Translates to: TAEPQGERSPLQLEH*QAEAGRSVFETSLV Trigger: AACCAGGCTAGTTTCAAACACAGATCTGCCTGCCTCTGCCTGCCAATGCTCCAACTGAAGAGGCGACCTCTCACCCTGTGGCTCCGCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR TCA 90 bp | TCCTCTGAGAACTCCTGCTTCTTTGCTGGAGACTCGAGCAGCCAGTaGCAGCCCGTCAGAGCCTGTCCTGTGAATGGCTTCTGCCTGGTT | + |
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Preference number: 1 (lower is better) Translates to: SSENSCFFAGDSSSQ*QPVRACPVNGFCLV Trigger: AACCAGGCAGAAGCCATTCACAGGACAGGCTCTGACGGGCTGTCACTGGCTGCTCGAGTCTCCAGCAAAGAAGCAGGAGTTCTCAGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062458.6 |
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| 3UTR GCA 90 bp | CGAGTGGTTGTCCCAGGTGGTGGTGTGAGCACAGCTGGCAGCTTCTaGAAGCTGAGCACAGACAACAAACAGGCAGACCACTCTGTCAAC | + |
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Preference number: 1 (lower is better) Translates to: RVVVPGGGVSTAGSF*KLSTDNKQADHSVN Trigger: GTTGACAGAGTGGTCTGCCTGTTTGTTGTCTGTGCTCAGCTTGCAGAAGCTGCCAGCTGTGCTCACACCACCACCTGGGACAACCACTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR CCA 90 bp | GAGGTCGGTCGGGGGTCCTTACGTCAGTCGCTGTATGAGCACTCCTaGACATCTCATCCAGCTTCAGCCATGTCCACAAAGCCATCACCA | + |
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Preference number: 1 (lower is better) Translates to: EVGRGSLRQSLYEHS*TSHPASAMSTKPSP Trigger: TGGTGATGGCTTTGTGGACATGGCTGAAGCTGGATGAGATGTCCAGGAGTGCTCATACAGCGACTGACGTAAGGACCCCCGACCGACCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR GCA 90 bp | GACAGGTCACACACAACACATGGGGTGACAACAGCACAGGTCACATaGACTAGCACCATGCCACAGGAGTCGAGAGGACAACAAGCCACC | + |
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Preference number: 1 (lower is better) Translates to: DRSHTTHGVTTAQVT*TSTMPQESRGQQAT Trigger: GGTGGCTTGTTGTCCTCTCGACTCCTGTGGCATGGTGCTAGTGCATGTGACCTGTGCTGTTGTCACCCCATGTGTTGTGTGTGACCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR CCA 90 bp | AGGCCCGGGATGTGGAGCAGCCGCAGACAGAAAGTCACTTTCTCCTaGATGGAAGGACGTGTTCCTCTGAGAACTCCTGCTTCTTTGCTG | + |
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Preference number: 1 (lower is better) Translates to: RPGMWSSRRQKVTFS*MEGRVPLRTPASLL Trigger: CAGCAAAGAAGCAGGAGTTCTCAGAGGAACACGTCCTTCCATCCAGGAGAAAGTGACTTTCTGTCTGCGGCTGCTCCACATCCCGGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062458.6 |
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| 3UTR CCA 90 bp | AGGCCCGGGATGTGGAGCAGCCGCAGACAGAAAGTCACTTTCTCCTaGATGGAAGGACGTGTTCCTCTGAGAACTCCTGCTTCTTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: RPGMWSSRRQKVTFS*MEGRVPLRTPASFW Trigger: CCAGAAAGAAGCAGGAGTTCTCAGAGGAACACGTCCTTCCATCCAGGAGAAAGTGACTTTCTGTCTGCGGCTGCTCCACATCCCGGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR TCA 90 bp | CTGGAGATAGAGTCACTCCAGACTGATAGTGAACAAAGCAGCGGCTaGCCTGAGAACAAGCCCAGGCCGGGAGGCAGAGGGGAATTCAAA | + |
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Preference number: 1 (lower is better) Translates to: LEIESLQTDSEQSSG*PENKPRPGGRGEFK Trigger: TTTGAATTCCCCTCTGCCTCCCGGCCTGGGCTTGTTCTCAGGTCAGCCGCTGCTTTGTTCACTATCAGTCTGGAGTGACTCTATCTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| 3UTR CCA 90 bp | ATTCCCACTCATAACCTTCCCCAGCTTTCCTGCAACCTCCATGGATaGTGTCTGAACTTGACCAACGAGTGGTTGTCCCAGGTGGTGGTG | + |
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Preference number: 1 (lower is better) Translates to: IPTHNLPQLSCNLHG*CLNLTNEWLSQVVV Trigger: CACCACCACCTGGGACAACCACTCGTTGGTCAAGTTCAGACACCATCCATGGAGGTTGCAGGAAAGCTGGGGAAGGTTATGAGTGGGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR TCA 90 bp | GCAGACAGAAAGTCACTTTCTCCTGGATGGAAGGACGTGTTCCTCTaGGAACTCCTGCTTCTTTGCTGGAGACTCGAGCAGCCAGTGACA | + |
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Preference number: 1 (lower is better) Translates to: ADRKSLSPGWKDVFL*ELLLLCWRLEQPVT Trigger: TGTCACTGGCTGCTCGAGTCTCCAGCAAAGAAGCAGGAGTTCTCAGAGGAACACGTCCTTCCATCCAGGAGAAAGTGACTTTCTGTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062458.6 |
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| 3UTR TCA 90 bp | CCGCCTGGAAAGGTGACTCTCAGCTGTGTGAGAGATGTGGATTACTaGGTTCATGTAGGACTCTCTGAAGTCAGACACCAAGGGCACACG | + |
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Preference number: 1 (lower is better) Translates to: PPGKVTLSCVRDVDY*VHVGLSEVRHQGHT Trigger: CGTGTGCCCTTGGTGTCTGACTTCAGAGAGTCCTACATGAACTCAGTAATCCACATCTCTCACACAGCTGAGAGTCACCTTTCCAGGCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR TCA 90 bp | TGGACCTTTAACAGCCCTGTTCAGGCAGTGATACTTGCCCACCTGTaGCTTGTCTTCAAGCTGAGCACCAGAACTGTGGCTAAGCTGGTC | + |
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Preference number: 1 (lower is better) Translates to: WTFNSPVQAVILAHL*LVFKLSTRTVAKLV Trigger: GACCAGCTTAGCCACAGTTCTGGTGCTCAGCTTGAAGACAAGTCACAGGTGGGCAAGTATCACTGCCTGAACAGGGCTGTTAAAGGTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR GCA 90 bp | CACAGAAACAGTGCAAACAGAAACACAGACACCCACTTCCACTCGTaGTGGGCCTGTTTCTTTTGTCTCAAAGGGCAGAAGTGTCGGGCG | + |
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Preference number: 1 (lower is better) Translates to: HRNSANRNTDTHFHS*WACFFCLKGQKCRA Trigger: CGCCCGACACTTCTGCCCTTTGAGACAAAAGAAACAGGCCCAGCACGAGTGGAAGTGGGTGTCTGTGTTTCTGTTTGCACTGTTTCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR GCA 90 bp | TTCCCTCTGCAGCTTAGACTGGCCTGGAACTCACAGGGATCCTCCTaGCTCAGTCTCCTAAGGACTGGGTTTACAGGTGTGAGTGTTTTA | + |
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Preference number: 1 (lower is better) Translates to: FPLQLRLAWNSQGSS*LSLLRTGFTGVSVL Trigger: TAAAACACTCACACCTGTAAACCCAGTCCTTAGGAGACTGAGGCAGGAGGATCCCTGTGAGTTCCAGGCCAGTCTAAGCTGCAGAGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR CCA 90 bp | AGAAACAGTGCAAACAGAAACACAGACACCCACTTCCACTCGTGCTaGGCCTGTTTCTTTTGTCTCAAAGGGCAGAAGTGTCGGGCGCAG | + |
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Preference number: 1 (lower is better) Translates to: RNSANRNTDTHFHSC*ACFFCLKGQKCRAQ Trigger: CTGCGCCCGACACTTCTGCCCTTTGAGACAAAAGAAACAGGCCCAGCACGAGTGGAAGTGGGTGTCTGTGTTTCTGTTTGCACTGTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR GCA 90 bp | CGAGTGTATTTCATGATTTTGCCTGGGTGGCTGTCACAGAAACAGTaGAAACAGAAACACAGACACCCACTTCCACTCGTGCTGGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: RVYFMILPGWLSQKQ*KQKHRHPLPLVLGL Trigger: CAGGCCCAGCACGAGTGGAAGTGGGTGTCTGTGTTTCTGTTTGCACTGTTTCTGTGACAGCCACCCAGGCAAAATCATGAAATACACTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR TCA 90 bp | ACAGGTGAGCAGGGTACCAACAGCAGGCTGCATGCATTCCAGGTATaGTGCAGGAAAAGAAAACTGAAAGACATCTCTCAAACCACGCTA | + |
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Preference number: 1 (lower is better) Translates to: TGEQGTNSRLHAFQV*CRKRKLKDISQTTL Trigger: TAGCGTGGTTTGAGAGATGTCTTTCAGTTTTCTTTTCCTGCATCATACCTGGAATGCATGCAGCCTGCTGTTGGTACCCTGCTCACCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR GCA 90 bp | TACTTTCGAAACAGTATTCCCACTCATAACCTTCCCCAGCTTTCCTaGAACCTCCATGGATGGTGTCTGAACTTGACCAACGAGTGGTTG | + |
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Preference number: 1 (lower is better) Translates to: YFRNSIPTHNLPQLS*NLHGWCLNLTNEWL Trigger: CAACCACTCGTTGGTCAAGTTCAGACACCATCCATGGAGGTTGCAGGAAAGCTGGGGAAGGTTATGAGTGGGAATACTGTTTCGAAAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR TCA 90 bp | TCTCTCAAACCACGCTATACCACCAGACTCGTTCTTCCATTAACCTaGCCTGCACACAGCAACCATTTCATTCCTAAGATGCACAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: SLKPRYTTRLVLPLT*PAHSNHFIPKMHRR Trigger: CCTTCTGTGCATCTTAGGAATGAAATGGTTGCTGTGTGCAGGTCAGGTTAATGGAAGAACGAGTCTGGTGGTATAGCGTGGTTTGAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR GCA 90 bp | AAGACCAGAAATGACAGCTGCAAGATCCCTCTCTCAGATAGCACCTaGCTCGCTCACAGGACAAGTTTTACAGAGCTATGCTATAGAGTA | + |
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Preference number: 1 (lower is better) Translates to: KTRNDSCKIPLSDST*LAHRTSFTELCYRV Trigger: TACTCTATAGCATAGCTCTGTAAAACTTGTCCTGTGAGCGAGGCAGGTGCTATCTGAGAGAGGGATCTTGCAGCTGTCATTTCTGGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR TCA 90 bp | GAACTTTATGACAACAAGAGCCCGGCACCAGGAGGGTCACCGGGATaGCAGAAATTCGTTCTATTCCTTTTGAATGCACATTTCTACATA | + |
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Preference number: 1 (lower is better) Translates to: ELYDNKSPAPGGSPG*QKFVLFLLNAHFYI Trigger: TATGTAGAAATGTGCATTCAAAAGGAATAGAACGAATTTCTGTCATCCCGGTGACCCTCCTGGTGCCGGGCTCTTGTTGTCATAAAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| 3UTR CCA 90 bp | TTCAAGAACGGCTCTGTGGACACAGACTTGCATGTGGTAGAACCCTaGTTCTACATTAACACTGCCCATTTAATGCACGATACTTTCGAA | + |
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Preference number: 1 (lower is better) Translates to: FKNGSVDTDLHVVEP*FYINTAHLMHDTFE Trigger: TTCGAAAGTATCGTGCATTAAATGGGCAGTGTTAATGTAGAACCAGGGTTCTACCACATGCAAGTCTGTGTCCACAGAGCCGTTCTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR GCA 90 bp | AGGAGGGTCACCGGGATGACAGAAATTCGTTCTATTCCTTTTGAATaGACATTTCTACATAATCGGAGGAAAAGAGCATCCATTACAGCT | + |
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Preference number: 1 (lower is better) Translates to: RRVTGMTEIRSIPFE*TFLHNRRKRASITA Trigger: AGCTGTAATGGATGCTCTTTTCCTCCGATTATGTAGAAATGTGCATTCAAAAGGAATAGAACGAATTTCTGTCATCCCGGTGACCCTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| 3UTR CCA 90 bp | TTAAAGAAGCAATTTACAGAACCGAGTGTATTTCATGATTTTGCCTaGGTGGCTGTCACAGAAACAGTGCAAACAGAAACACAGACACCC | + |
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Preference number: 1 (lower is better) Translates to: LKKQFTEPSVFHDFA*VAVTETVQTETQTP Trigger: GGGTGTCTGTGTTTCTGTTTGCACTGTTTCTGTGACAGCCACCCAGGCAAAATCATGAAATACACTCGGTTCTGTAAATTGCTTCTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR TCA 90 bp | TACGGGACATTTAAAGAAGCAATTTACAGAACCGAGTGTATTTCATaGTTTTGCCTGGGTGGCTGTCACAGAAACAGTGCAAACAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: YGTFKEAIYRTECIS*FCLGGCHRNSANRN Trigger: GTTTCTGTTTGCACTGTTTCTGTGACAGCCACCCAGGCAAAATCATGAAATACACTCGGTTCTGTAAATTGCTTCTTTAAATGTCCCGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR GCA 90 bp | ACTTTACATCGCTCAAACATGATCATCTCGAGATCAAACTCACGGTaGTCAGAGCTTTTAGAAATGAAATTATCCCTTCTCAGACATTCC | + |
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Preference number: 1 (lower is better) Translates to: TLHRSNMIISRSNSR*SELLEMKLSLLRHS Trigger: GGAATGTCTGAGAAGGGATAATTTCATTTCTAAAAGCTCTGAGCACCGTGAGTTTGATCTCGAGATGATCATGTTTGAGCGATGTAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCGGGCGCAGACCTCTGTGAGGCTGACAAGGACTAAGGGCAGCTCGGAGCTCGGGCAACAGGGTGGATaGGGGAACACTGCCACTCAG | + |
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Preference number: 2 (lower is better) Translates to: CRAQTSVRLTRTKGSSELGQQGG*GNTATQ Trigger: CTGAGTGGCAGTGTTCCCTCATCCACCCTGTTGCCC...GAGCTCCGAGCTGCCCTTAGTCCTTGTCAGCCTCACAGAGGTCTGCGCCCGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAAGTGTCGGGCGCAGACCTCTGTGAGGCTGACAAGGACTAAGGGCAGCTCGAGTCTGCTCCCACTCTaGCAGCAGCTCGCAGCTAGT | + |
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Preference number: 2 (lower is better) Translates to: QKCRAQTSVRLTRTKGSSSLLPL*QQLAAS Trigger: ACTAGCTGCGAGCTGCTGTCAGAGTGGGAGCAGACT...CGAGCTGCCCTTAGTCCTTGTCAGCCTCACAGAGGTCTGCGCCCGACACTTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGCCCAGGCCGGGAGGCAGAGGGGAATTCAAACTTCAGGATCAAAGAGCTTCTGTCCTTCCAGAGGGTaGGCCAGCTCTGTGCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: QAQAGRQRGIQTSGSKSFCPSRG*ASSVPC Trigger: GCAGGGCACAGAGCTGGCTCACCCTCTGGAAGGACA...GAAGCTCTTTGATCCTGAAGTTTGAATTCCCCTCTGCCTCCCGGCCTGGGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCGGGCGCAGACCTCTGTGAGGCTGACAAGGACTAAGGGCAGCTCGGAGCTCTCATGTAGGACTCTCTaGAGTCAGACACCAAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: CRAQTSVRLTRTKGSSELSCRTL*SQTPRA Trigger: TGCCCTTGGTGTCTGACTTCAGAGAGTCCTACATGA...GAGCTCCGAGCTGCCCTTAGTCCTTGTCAGCCTCACAGAGGTCTGCGCCCGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR-3UTR GCA 90 bp | GGCATGGCTCACTGTCTTGCTTTCCTGCCAGGAAGACAAAAGAAGGGGCCGGGCTGGATGAGGGAACACTaGCACTCAGGGAGCACTGCT | + |
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Preference number: 2 (lower is better) Translates to: GMAHCLAFLPGRQKKGPGWMREH*HSGSTA Trigger: AGCAGTGCTCCCTGAGTGGCAGTGTTCCCTCATCCA...GCCCGGCCCCTTCTTTTGTCTTCCTGGCAGGAAAGCAAGACAGTGAGCCATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGGGAATTCAAACTTCAGGATCAAAGAGCTTCAAGCTCCGAGCCTCACCCAGGACTCGAGCAGCCAGTaGCAGCCCGTCAGAGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: EGNSNFRIKELQAPSLTQDSSSQ*QPVRAC Trigger: ACAGGCTCTGACGGGCTGTCACTGGCTGCTCGAGTC...CTGGGTGAGGCTCGGAGCTTGAAGCTCTTTGATCCTGAAGTTTGAATTCCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGAAGCGTGGGGCTCCCAGGAGGAAAGGGGTGCATCTTCTAGTCCCTGGCCTACACCCTATTTGCCCTaGTTTCTCAGAGGGCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: PEAWGSQEERGASSSPWPTPYLP*FLRGLQ Trigger: TTGAAGCCCTCTGAGAAAGCAGGGCAAATAGGGTGT...AGGCCAGGGACTAGAAGATGCACCCCTTTCCTCCTGGGAGCCCCACGCTTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCGGGCGCAGACCTCTGTGAGGCTGACAAGGACTAAGGGCAGCTCGGAGCTCTGCAACCTCCATGGATaGTGTCTGAACTTGACCAAC | + |
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Preference number: 2 (lower is better) Translates to: CRAQTSVRLTRTKGSSELCNLHG*CLNLTN Trigger: GTTGGTCAAGTTCAGACACCATCCATGGAGGTTGCA...GAGCTCCGAGCTGCCCTTAGTCCTTGTCAGCCTCACAGAGGTCTGCGCCCGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR CAA 90 bp | TCACTCTTAACGGCGGAGCCACAGGGTGAGAGGTCGCCTCTTCAGTaGGAGCATTGGCAGGCAGAGGCAGGCAGATCTGTGTTTGAAACT | + |
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Preference number: 2 (lower is better) Translates to: SLLTAEPQGERSPLQ*EHWQAEAGRSVFET Trigger: AGTTTCAAACACAGATCTGCCTGCCTCTGCCTGCCAATGCTCCAACTGAAGAGGCGACCTCTCACCCTGTGGCTCCGCCGTTAAGAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAGCTTCAAGCTCCGAGCCTCACCCAGAGCTTCCAGACTCAGTGTACCTGCCCAGAACAGATACCCTTaGAAAGCAGGCCCGGGATGT | + |
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Preference number: 2 (lower is better) Translates to: KSFKLRASPRASRLSVPAQNRYP*KAGPGC Trigger: ACATCCCGGGCCTGCTTTTCAAGGGTATCTGTTCTG...GGCAGGTACACTGAGTCTGGAAGCTCTGGGTGAGGCTCGGAGCTTGAAGCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAGAACAAGCCCAGGCCGGGAGGCAGAGGGGAATTCAAACTTCAGGATCAAAGAACAAAGCAGCGGCTaGCCTGAGAACAAGCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LRTSPGREAEGNSNFRIKEQSSG*PENKPR Trigger: CCTGGGCTTGTTCTCAGGTCAGCCGCTGCTTTGTTC...TTTGATCCTGAAGTTTGAATTCCCCTCTGCCTCCCGGCCTGGGCTTGTTCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| 3UTR-3UTR TCA 90 bp | GGCATGGCTCACTGTCTTGCTTTCCTGCCAGGAAGACAAAAGAAGGGGCCGGGCGGAGGGTCACCGGGATaGCAGAAATTCGTTCTATTC | + |
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Preference number: 2 (lower is better) Translates to: GMAHCLAFLPGRQKKGPGGGSPG*QKFVLF Trigger: GAATAGAACGAATTTCTGTCATCCCGGTGACCCTCC...GCCCGGCCCCTTCTTTTGTCTTCCTGGCAGGAAAGCAAGACAGTGAGCCATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR-3UTR TCA 90 bp | GGCATGGCTCACTGTCTTGCTTTCCTGCCAGGAAGACAAAAGAAGGGGCCGGGCACACAACACATGGGGTaGCAACAGCACAGGTCACAT | + |
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Preference number: 2 (lower is better) Translates to: GMAHCLAFLPGRQKKGPGTQHMG*QQHRSH Trigger: ATGTGACCTGTGCTGTTGTCACCCCATGTGTTGTGT...GCCCGGCCCCTTCTTTTGTCTTCCTGGCAGGAAAGCAAGACAGTGAGCCATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR-3UTR TCA 90 bp | ACACAGACACCCACTTCCACTCGTGCTGGGCCTGTTTCTTTTGTCTCAAAGGGCCGTGACCTGACAGCCTaGAGGGCACTCTTTCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: TQTPTSTRAGPVSFVSKGRDLTA*RALFLC Trigger: GCAGAGAAAGAGTGCCCTTCAGGCTGTCAGGTCACG...GCCCTTTGAGACAAAAGAAACAGGCCCAGCACGAGTGGAAGTGGGTGTCTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR-3UTR GCA 90 bp | AGAAGCCTCCTGGGTAAGAAAGACACAGGTGAGCAGGGTACCAACAGCAGGCTGACTCAGAAATCCACCTaGCTCTGCCTCCAAGCGCTG | + |
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Preference number: 2 (lower is better) Translates to: RSLLGKKDTGEQGTNSRLTQKST*LCLQAL Trigger: CAGCGCTTGGAGGCAGAGGCAGGTGGATTTCTGAGT...CAGCCTGCTGTTGGTACCCTGCTCACCTGTGTCTTTCTTACCCAGGAGGCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAGCCTCCTGGGTAAGAAAGACACAGGTGAGCAGGGTACCAACAGCAGGCTGTGGTGTGAGCACAGCTaGCAGCTTCTGCAAGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: RSLLGKKDTGEQGTNSRLWCEHS*QLLQAE Trigger: CTCAGCTTGCAGAAGCTGCCAGCTGTGCTCACACCA...CAGCCTGCTGTTGGTACCCTGCTCACCTGTGTCTTTCTTACCCAGGAGGCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR-3UTR GCA 90 bp | GGATCAAAGAGCTTCAAGCTCCGAGCCTCACCCAGAGCTTCCAGACTCAGTGTACATGCACTAGCACCATaGCACAGGAGTCGAGAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: GSKSFKLRASPRASRLSVHALAP*HRSRED Trigger: GTCCTCTCGACTCCTGTGGCATGGTGCTAGTGCATG...TACACTGAGTCTGGAAGCTCTGGGTGAGGCTCGGAGCTTGAAGCTCTTTGATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR CAA 90 bp | TGCCCTTGGGACACACCCGTCCTTCTTTCTAAGACCCTCACTGGCTaGACACGGGAATCCCTCTTTCACGTAACACCATTCCCAGAGACT | + |
|
Preference number: 2 (lower is better) Translates to: CPWDTPVLLSKTLTG*TRESLFHVTPFPET Trigger: AGTCTCTGGGAATGGTGTTACGTGAAAGAGGGATTCCCGTGTCAAGCCAGTGAGGGTCTTAGAAAGAAGGACGGGTGTGTCCCAAGGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGAGAACAAGCCCAGGCCGGGAGGCAGAGGGGAATTCAAACTTCAGGATCAAACAGAACAGATACCCTTaGAAAGCAGGCCCGGGATGT | + |
|
Preference number: 2 (lower is better) Translates to: LRTSPGREAEGNSNFRIKQNRYP*KAGPGC Trigger: ACATCCCGGGCCTGCTTTTCAAGGGTATCTGTTCTG...TTTGATCCTGAAGTTTGAATTCCCCTCTGCCTCCCGGCCTGGGCTTGTTCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTCCCAGGAGGAAAGGGGTGCATCTTCTAGTCCCTGGCCTCTTCTTTCCTCATGCCCTTTGGTATTCCTaGTACTCAAGCACAAACGGG | + |
|
Preference number: 2 (lower is better) Translates to: APRRKGVHLLVPGLFFPHALWYS*YSSTNG Trigger: CCCGTTTGTGCTTGAGTATCAGGAATACCAAAGGGC...ATGAGGAAAGAAGAGGCCAGGGACTAGAAGATGCACCCCTTTCCTCCTGGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTCAAGCTCCGAGCCTCACCCAGAGCTTCCAGACTCAGTGTACCTGCCCTGCCGCAGAGAACAGTTCATaGACTTTATTTCTACAACCC | + |
|
Preference number: 2 (lower is better) Translates to: LQAPSLTQSFQTQCTCPAAENSS*TLFLQP Trigger: GGGTTGTAGAAATAAAGTGCATGAACTGTTCTCTGC...GGCAGGGCAGGTACACTGAGTCTGGAAGCTCTGGGTGAGGCTCGGAGCTTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| 3UTR-3UTR GCA 90 bp | GGATCAAAGAGCTTCAAGCTCCGAGCCTCACCCAGAGCTTCCAGACTCAGTGTATCCTCTGAGAACTCCTaGTTCTTTGCTGGAGACTCG | + |
|
Preference number: 2 (lower is better) Translates to: GSKSFKLRASPRASRLSVSSENS*FFAGDS Trigger: CGAGTCTCCAGCAAAGAAGCAGGAGTTCTCAGAGGA...TACACTGAGTCTGGAAGCTCTGGGTGAGGCTCGGAGCTTGAAGCTCTTTGATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062458.6 |
||
| 3UTR-3UTR GCA 90 bp | CAGAAGTGTCGGGCGCAGACCTCTGTGAGGCTGACAAGGACTAAGGGCAGCTCGTTAGAGGCTGTACAATaGCTTCCTAAAATTCTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: QKCRAQTSVRLTRTKGSSLEAVQ*LPKILP Trigger: TGGCAGAATTTTAGGAAGGCATTGTACAGCCTCTAA...CGAGCTGCCCTTAGTCCTTGTCAGCCTCACAGAGGTCTGCGCCCGACACTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTCCCAGGAGGAAAGGGGTGCATCTTCTAGTCCCTGGCCTCTTCTTTCCTCATTCCTCTGAGAACTCCTaGTTCTTTCTGGAGGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: APRRKGVHLLVPGLFFPHSSENS*FFLEEG Trigger: TCCTTCCTCCAGAAAGAAGCAGGAGTTCTCAGAGGA...ATGAGGAAAGAAGAGGCCAGGGACTAGAAGATGCACCCCTTTCCTCCTGGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGGTCACCGGGATGACAGAAATTCGTTCTATTCCTTTTGAATGCACATTTCTAGACTCGAGCAGCCAGTaGCAGCCCGTCAGAGCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: RVTGMTEIRSIPFECTFLDSSSQ*QPVRAC Trigger: ACAGGCTCTGACGGGCTGTCACTGGCTGCTCGAGTC...TAGAAATGTGCATTCAAAAGGAATAGAACGAATTTCTGTCATCCCGGTGACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGGTCACCGGGATGACAGAAATTCGTTCTATTCCTTTTGAATGCACATTTCTAGGTGAGCCAGCTCTGTaGCCTGCATGGGCAGGACCA | + |
|
Preference number: 2 (lower is better) Translates to: RVTGMTEIRSIPFECTFLGEPAL*PAWAGP Trigger: TGGTCCTGCCCATGCAGGGCACAGAGCTGGCTCACC...TAGAAATGTGCATTCAAAAGGAATAGAACGAATTTCTGTCATCCCGGTGACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| 3UTR-3UTR CCA 90 bp | GGATCAAAGAGCTTCAAGCTCCGAGCCTCACCCAGAGCTTCCAGACTCAGTGTAGGAAGGACCAGATCATaGAAAACAGCCTCTGATGAA | + |
|
Preference number: 2 (lower is better) Translates to: GSKSFKLRASPRASRLSVGRTRS*KTASDE Trigger: TTCATCAGAGGCTGTTTTCCATGATCTGGTCCTTCC...TACACTGAGTCTGGAAGCTCTGGGTGAGGCTCGGAGCTTGAAGCTCTTTGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCACCGGGATGACAGAAATTCGTTCTATTCCTTTTGAATGCACATTTCTACATTGTCCTTCCAGAGGGTaGGCCAGCTCTGTGCCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: VTGMTEIRSIPFECTFLHCPSRG*ASSVPC Trigger: GCAGGGCACAGAGCTGGCTCACCCTCTGGAAGGACA...ATGTAGAAATGTGCATTCAAAAGGAATAGAACGAATTTCTGTCATCCCGGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTTTAGATGCATACTCTCCCTTCAGTATCAGAACAGATACCCTTGAAAAGCAGGGTGAGCCAGCTCTGTaGCCTGCATGGGCAGGACCA | + |
|
Preference number: 2 (lower is better) Translates to: FLDAYSPFSIRTDTLEKQGEPAL*PAWAGP Trigger: TGGTCCTGCCCATGCAGGGCACAGAGCTGGCTCACC...CTGCTTTTCAAGGGTATCTGTTCTGATACTGAAGGGAGAGTATGCATCTAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAGGGTGGATGAGGGAACACTGCCACTCAGGGAGCACTGCTGGAGATAGAGTCAGTGCTGTTTTTAGATaGATACTCTCCCTTCAGTAT | + |
|
Preference number: 2 (lower is better) Translates to: TGWMREHCHSGSTAGDRVSAVFR*ILSLQY Trigger: ATACTGAAGGGAGAGTATGCATCTAAAAACAGCACT...GACTCTATCTCCAGCAGTGCTCCCTGAGTGGCAGTGTTCCCTCATCCACCCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGGAATTCAAACTTCAGGATCAAAGAGCTTCAAGCTCCGAGCCTCACCCAGAAAGTCACTTTCTCCTaGATGGAAGGACGTGTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: EGNSNFRIKELQAPSLTQKVTFS*MEGRVP Trigger: AGGAACACGTCCTTCCATCCAGGAGAAAGTGACTTT...CTGGGTGAGGCTCGGAGCTTGAAGCTCTTTGATCCTGAAGTTTGAATTCCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| 3UTR-3UTR TCA 90 bp | ATCTTGGGCACTTTACATCGCTCAAACATGATCATCTCGAGATCAAACTCACGGTCAGAGCCTGTCCTGTaGATGGCTTCTGCCTGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: ILGTLHRSNMIISRSNSRSEPVL*MASAWL Trigger: TAACCAGGCAGAAGCCATTCACAGGACAGGCTCTGA...CCGTGAGTTTGATCTCGAGATGATCATGTTTGAGCGATGTAAAGTGCCCAAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGGGAACAGTGCTGTTTTTAGATGCATACTCTCCCTTCAGTATCAGAACAGATAAGGACGTGTTCCTCTaGGAACTCCTGCTTCTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: WGTVLFLDAYSPFSIRTDKDVFL*ELLLLC Trigger: GCAAAGAAGCAGGAGTTCTCAGAGGAACACGTCCTT...ATCTGTTCTGATACTGAAGGGAGAGTATGCATCTAAAAACAGCACTGTTCCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062458.6 |
||
| 3UTR CAA 90 bp | GGGCTTTCACTTTTATTAGGACCGTGCAAGAGAACTGACAGACATTaGAAACACTTCACACTGGGAGGTAAGGAAGCCCAAACCATCTTT | + |
|
Preference number: 2 (lower is better) Translates to: GLSLLLGPCKRTDRH*KHFTLGGKEAQTIF Trigger: AAAGATGGTTTGGGCTTCCTTACCTCCCAGTGTGAAGTGTTTCAAATGTCTGTCAGTTCTCTTGCACGGTCCTAATAAAAGTGAAAGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR CAA 90 bp | TTACAGTTTCCAGACTCCCATTTGACACATATTAAAAGCAGAACATaGCAAAGGTTACTAGCAGCAGGCCCCTTCAACAAGAAGGGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: LQFPDSHLTHIKSRT*QRLLAAGPFNKKGL Trigger: GAGACCCTTCTTGTTGAAGGGGCCTGCTGCTAGTAACCTTTGCAATGTTCTGCTTTTAATATGTGTCAAATGGGAGTCTGGAAACTGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCAATTTACAGAACCGAGTGTATTTCATGATTTTGCCTGGGTGGCTGTCACAGAGAGAGTTGCCATGTTaGGGGGAAAATTATAAATCC | + |
|
Preference number: 2 (lower is better) Translates to: SNLQNRVYFMILPGWLSQRELPC*GENYKS Trigger: GGATTTATAATTTTCCCCTCAACATGGCAACTCTCT...CTGTGACAGCCACCCAGGCAAAATCATGAAATACACTCGGTTCTGTAAATTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCAATTTACAGAACCGAGTGTATTTCATGATTTTGCCTGGGTGGCTGTCACAGGCAGAGAACAGTTCATaGACTTTATTTCTACAACCC | + |
|
Preference number: 2 (lower is better) Translates to: SNLQNRVYFMILPGWLSQAENSS*TLFLQP Trigger: GGGTTGTAGAAATAAAGTGCATGAACTGTTCTCTGC...CTGTGACAGCCACCCAGGCAAAATCATGAAATACACTCGGTTCTGTAAATTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR-3UTR GCA 90 bp | TATTTCATGATTTTGCCTGGGTGGCTGTCACAGAAACAGTGCAAACAGAAACACAGTTTTACAGAGCTATaGTATAGAGTAGGGAAAATG | + |
|
Preference number: 2 (lower is better) Translates to: YFMILPGWLSQKQCKQKHSFTEL*YRVGKM Trigger: CATTTTCCCTACTCTATAGCATAGCTCTGTAAAACT...GTGTTTCTGTTTGCACTGTTTCTGTGACAGCCACCCAGGCAAAATCATGAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR TCA 72 bp | CCCGGCTGGTGTGCCATGTGCAGAGGCCACCTCTGGTaGGGGGCAGACAAGCTTCCGAGTCCCTTCCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: PGWCAMCRGHLW*GADKLPSPFPQ Trigger: CTGTGGGAAGGGACTCGGAAGCTTGTCTGCCCCTCACCAGAGGTGGCCTCTGCACATGGCACACCAGCCGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR CCA 72 bp | GTCCTTCCAGAGGGTGAGCCAGCTCTGTGCCCTGCATaGGCAGGACCAGCGGGACTCACTCCGACTCGCACT | + |
|
Preference number: 3 (lower is better) Translates to: VLPEGEPALCPA*AGPAGLTPTRT Trigger: AGTGCGAGTCGGAGTGAGTCCCGCTGGTCCTGCCCATGCAGGGCACAGAGCTGGCTCACCCTCTGGAAGGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| 3UTR TCA 72 bp | AGGAGGGAACAGAGCAGAGGGGACCACTGGCTGCTCTaGGCGACCACCGAGCTGAGCTTCACTCCGCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: RREQSRGDHWLL*ATTELSFTPPS Trigger: TGATGGCGGAGTGAAGCTCAGCTCGGTGGTCGCTCAGAGCAGCCAGTGGTCCCCTCTGCTCTGTTCCCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR CCA 72 bp | CGGCGGAGCCACAGGGTGAGAGGTCGCCTCTTCAGTTaGAGCATTGGCAGGCAGAGGCAGGCAGATCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RRSHRVRGRLFS*SIGRQRQADLC Trigger: ACACAGATCTGCCTGCCTCTGCCTGCCAATGCTCCAACTGAAGAGGCGACCTCTCACCCTGTGGCTCCGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR TCA 72 bp | GAGGGGACCACTGGCTGCTCTGAGCGACCACCGAGCTaGGCTTCACTCCGCCATCAGCTGGTAACTTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: EGTTGCSERPPS*ASLRHQLVTFL Trigger: CAGGAAAGTTACCAGCTGATGGCGGAGTGAAGCTCAGCTCGGTGGTCGCTCAGAGCAGCCAGTGGTCCCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR GCA 72 bp | CCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTaGCTCCAAGCGCTGGGATTAAAGGCATGCGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: PGWPRTQKSTCL*LQALGLKACAT Trigger: GGTGGCGCATGCCTTTAATCCCAGCGCTTGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR TCA 72 bp | GAGTCACTCCAGACTGATAGTGAACAAAGCAGCGGCTaGCCTGAGAACAAGCCCAGGCCGGGAGGCAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: ESLQTDSEQSSG*PENKPRPGGRG Trigger: CCCTCTGCCTCCCGGCCTGGGCTTGTTCTCAGGTCAGCCGCTGCTTTGTTCACTATCAGTCTGGAGTGACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| 3UTR TCA 72 bp | TGCCAGGGACTCATTAACAGAGCACAGGGCCCACCATaGAGCACCCAGTCCAGTGCCGCAGTCCCACATACC | + |
|
Preference number: 3 (lower is better) Translates to: CQGLINRAQGPP*STQSSAAVPHT Trigger: GGTATGTGGGACTGCGGCACTGGACTGGGTGCTTCATGGTGGGCCCTGTGCTCTGTTAATGAGTCCCTGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR TCA 72 bp | CCACGGAACACAAGTGAGGTGGCTCTAGTCTACTCCTaGAGCGTGGGGCTCCCAGGAGGAAAGGGGTGCATC | + |
|
Preference number: 3 (lower is better) Translates to: PRNTSEVALVYS*SVGLPGGKGCI Trigger: GATGCACCCCTTTCCTCCTGGGAGCCCCACGCTTCAGGAGTAGACTAGAGCCACCTCACTTGTGTTCCGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGAAGCGTGGGGCTCCCAGGAGGAAAGGGGTGCATCTTCTAGTCCCTGGCCTTATGGGTGCAGGATCTaGGGCACTTTACATCGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PEAWGSQEERGASSSPWPYGCRI*GTLHRS Trigger: TGAGCGATGTAAAGTGCCCAAGATCCTGCACCCATA...AGGCCAGGGACTAGAAGATGCACCCCTTTCCTCCTGGGAGCCCCACGCTTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR TCA 72 bp | CTGACAAGGACTAAGGGCAGCTCGGAGCTCGTGACCTaGCAGCCTGAAGGGCACTCTTTCTCTGCCAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LTRTKGSSELVT*QPEGHSFSAKA Trigger: AGCCTTGGCAGAGAAAGAGTGCCCTTCAGGCTGTCAGGTCACGAGCTCCGAGCTGCCCTTAGTCCTTGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTGCAAGCTGAGCACAGACAACAAACAGGCAGACCACTCTGTCAACCCAGCAGGTCGCCTCTTCAGTaGGAGCATTGGCAGGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LLQAEHRQQTGRPLCQPSRSPLQ*EHWQAE Trigger: CTCTGCCTGCCAATGCTCCAACTGAAGAGGCGACCT...GCTGGGTTGACAGAGTGGTCTGCCTGTTTGTTGTCTGTGCTCAGCTTGCAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR GCA 72 bp | CAGCTTAGACTGGCCTGGAACTCACAGGGATCCTCCTaGCTCAGTCTCCTAAGGACTGGGTTTACAGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: QLRLAWNSQGSS*LSLLRTGFTGV Trigger: CACACCTGTAAACCCAGTCCTTAGGAGACTGAGGCAGGAGGATCCCTGTGAGTTCCAGGCCAGTCTAAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR CCA 72 bp | CCACAGGGTGAGAGGTCGCCTCTTCAGTTGGAGCATTaGCAGGCAGAGGCAGGCAGATCTGTGTTTGAAACT | + |
|
Preference number: 3 (lower is better) Translates to: PQGERSPLQLEH*QAEAGRSVFET Trigger: AGTTTCAAACACAGATCTGCCTGCCTCTGCCTGCCAATGCTCCAACTGAAGAGGCGACCTCTCACCCTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR CCA 72 bp | CGGGGGTCCTTACGTCAGTCGCTGTATGAGCACTCCTaGACATCTCATCCAGCTTCAGCCATGTCCACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: RGSLRQSLYEHS*TSHPASAMSTK Trigger: CTTTGTGGACATGGCTGAAGCTGGATGAGATGTCCAGGAGTGCTCATACAGCGACTGACGTAAGGACCCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGAACAAGCCCAGGCCGGGAGGCAGAGGGGAATTCAAACTTCAGGATCAAACCCCTTACACCCTATTaGCCCTGCTTTCTCAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LRTSPGREAEGNSNFRIKPLTPY*PCFLRG Trigger: CCCTCTGAGAAAGCAGGGCAAATAGGGTGTAAGGGG...TTTGATCCTGAAGTTTGAATTCCCCTCTGCCTCCCGGCCTGGGCTTGTTCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR TCA 72 bp | TGCATACTCTCCCTTCAGTATCAGAACAGATACCCTTaGAAAGCAGGCCCGGGATGTGGAGCAGCCGCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: CILSLQYQNRYP*KAGPGCGAAAD Trigger: GTCTGCGGCTGCTCCACATCCCGGGCCTGCTTTTCAAGGGTATCTGTTCTGATACTGAAGGGAGAGTATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| 3UTR GCA 72 bp | CACACAACACATGGGGTGACAACAGCACAGGTCACATaGACTAGCACCATGCCACAGGAGTCGAGAGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: HTTHGVTTAQVT*TSTMPQESRGQ Trigger: TTGTCCTCTCGACTCCTGTGGCATGGTGCTAGTGCATGTGACCTGTGCTGTTGTCACCCCATGTGTTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR GCA 72 bp | TTCAGCCATGTCCACAAAGCCATCACCAAGTCACGGTaGAGAGGGGACATGGTGGCCAGACTCTTTACATGC | + |
|
Preference number: 3 (lower is better) Translates to: FSHVHKAITKSR*RGDMVARLFTC Trigger: GCATGTAAAGAGTCTGGCCACCATGTCCCCTCTGCACCGTGACTTGGTGATGGCTTTGTGGACATGGCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR TCA 72 bp | AACAGCCCTGTTCAGGCAGTGATACTTGCCCACCTGTaGCTTGTCTTCAAGCTGAGCACCAGAACTGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: NSPVQAVILAHL*LVFKLSTRTVA Trigger: AGCCACAGTTCTGGTGCTCAGCTTGAAGACAAGTCACAGGTGGGCAAGTATCACTGCCTGAACAGGGCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR GCA 72 bp | ACACTTCAGCTGGTGACTCAGGTATTCATCCATCCATaGCAGGGACTCATTAACAGAGCACAGGGCCCACCA | + |
|
Preference number: 3 (lower is better) Translates to: TLQLVTQVFIHP*QGLINRAQGPP Trigger: TGGTGGGCCCTGTGCTCTGTTAATGAGTCCCTGGCATGGATGGATGAATACCTGAGTCACCAGCTGAAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR GCA 72 bp | TTGCTCCCAAGGACTCACAATCAAGTGATTGCAATGTaGCAGGAACCAAACTCCCAGCTTTCCCCGGGATGC | + |
|
Preference number: 3 (lower is better) Translates to: LLPRTHNQVIAM*QEPNSQLSPGC Trigger: GCATCCCGGGGAAAGCTGGGAGTTTGGTTCCTGGCACATTGCAATCACTTGATTGTGAGTCCTTGGGAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR CCA 72 bp | ATGTGGAGCAGCCGCAGACAGAAAGTCACTTTCTCCTaGATGGAAGGACGTGTTCCTCTGAGAACTCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: MWSSRRQKVTFS*MEGRVPLRTPA Trigger: AGCAGGAGTTCTCAGAGGAACACGTCCTTCCATCCAGGAGAAAGTGACTTTCTGTCTGCGGCTGCTCCACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| 3UTR CCA 72 bp | GCCCCCTTGGTTTATTTAGCTGTATTCCTTAGTCCCTaGACAGCACCCAGAGCCCTGTCCTGTCCTATCTGT | + |
|
Preference number: 3 (lower is better) Translates to: APLVYLAVFLSP*TAPRALSCPIC Trigger: ACAGATAGGACAGGACAGGGCTCTGGGTGCTGTCCAGGGACTAAGGAATACAGCTAAATAAACCAAGGGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGAGCATTGGCAGGCAGAGGCAGGCAGATCTGTGTTTGAAACTAGCCTGGTTGCACATCTGCTGATATaGTCTGATGAGGCAGTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: LEHWQAEAGRSVFETSLVAHLLI*SDEAVV Trigger: GACCACTGCCTCATCAGACAATATCAGCAGATGTGC...AACCAGGCTAGTTTCAAACACAGATCTGCCTGCCTCTGCCTGCCAATGCTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR TCA 72 bp | AAGTCACTTTCTCCTGGATGGAAGGACGTGTTCCTCTaGGAACTCCTGCTTCTTTGCTGGAGACTCGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: KSLSPGWKDVFL*ELLLLCWRLEQ Trigger: CTGCTCGAGTCTCCAGCAAAGAAGCAGGAGTTCTCAGAGGAACACGTCCTTCCATCCAGGAGAAAGTGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062458.6 |
||
| 3UTR TCA 72 bp | ATTCAAGTAGGAGCACCCTGGGCCCTTTGGTATTCCTaGTACTCAAGCACAAACGGGAGTCAAGTGCCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: IQVGAPWALWYS*YSSTNGSQVPL Trigger: CAAGGGCACTTGACTCCCGTTTGTGCTTGAGTATCAGGAATACCAAAGGGCCCAGGGTGCTCCTACTTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR TCA 72 bp | GCCCTGTCCTGTCCTATCTGTTGTCTCCCTTGTATTTaGGCATGGACCTTTAACAGCCCTGTTCAGGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: ALSCPICCLPCI*AWTFNSPVQAV Trigger: CACTGCCTGAACAGGGCTGTTAAAGGTCCATGCTCAAATACAAGGGAGACAACAGATAGGACAGGACAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR TCA 72 bp | CAACAAACAGGCAGACCACTCTGTCAACCCAGCCATTaGCCACGACACATACAGAAATCTGGGCCTCTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: QQTGRPLCQPSH*PRHIQKSGPLY Trigger: GTACAGAGGCCCAGATTTCTGTATGTGTCGTGGTCAATGGCTGGGTTGACAGAGTGGTCTGCCTGTTTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR CCA 72 bp | ACCACGACACATACAGAAATCTGGGCCTCTGTACAATaGCTGACTGGGCCTAGCCCCCTTGGTTTATTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: TTTHTEIWASVQ*LTGPSPLGLFS Trigger: GCTAAATAAACCAAGGGGGCTAGGCCCAGTCAGCCATTGTACAGAGGCCCAGATTTCTGTATGTGTCGTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR TCA 72 bp | GACAACAAGAGCCCGGCACCAGGAGGGTCACCGGGATaGCAGAAATTCGTTCTATTCCTTTTGAATGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: DNKSPAPGGSPG*QKFVLFLLNAH Trigger: ATGTGCATTCAAAAGGAATAGAACGAATTTCTGTCATCCCGGTGACCCTCCTGGTGCCGGGCTCTTGTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| 3UTR TCA 72 bp | GAGAGATGTGGATTACTGAGTTCATGTAGGACTCTCTaGAGTCAGACACCAAGGGCACACGAGGACAGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: ERCGLLSSCRTL*SQTPRAHEDRS Trigger: TGACCTGTCCTCGTGTGCCCTTGGTGTCTGACTTCAGAGAGTCCTACATGAACTCAGTAATCCACATCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR TCA 72 bp | AAGTCACTTTCTCCTGGATGGAAGGACGTGTTCCTCTaGGAACTCCTGCTTCTTTCTGGAGGAAGGACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: KSLSPGWKDVFL*ELLLLSGGRTR Trigger: TCTGGTCCTTCCTCCAGAAAGAAGCAGGAGTTCTCAGAGGAACACGTCCTTCCATCCAGGAGAAAGTGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR TCA 72 bp | CGACACATACAGAAATCTGGGCCTCTGTACAATGGCTaGCTGGGCCTAGCCCCCTTGGTTTATTTAGCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: RHIQKSGPLYNG*LGLAPLVYLAV Trigger: TACAGCTAAATAAACCAAGGGGGCTAGGCCCAGTCAGCCATTGTACAGAGGCCCAGATTTCTGTATGTGTCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR GCA 72 bp | CTCCTGGATGGAAGGACGTGTTCCTCTGAGAACTCCTaGTTCTTTCTGGAGGAAGGACCAGATCATGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LLDGRTCSSENS*FFLEEGPDHGK Trigger: TTTTCCATGATCTGGTCCTTCCTCCAGAAAGAAGCAGGAGTTCTCAGAGGAACACGTCCTTCCATCCAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR GCA 72 bp | AGTGCAAACAGAAACACAGACACCCACTTCCACTCGTaGTGGGCCTGTTTCTTTTGTCTCAAAGGGCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SANRNTDTHFHS*WACFFCLKGQK Trigger: CTTCTGCCCTTTGAGACAAAAGAAACAGGCCCAGCACGAGTGGAAGTGGGTGTCTGTGTTTCTGTTTGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR CCA 72 bp | GCAAACAGAAACACAGACACCCACTTCCACTCGTGCTaGGCCTGTTTCTTTTGTCTCAAAGGGCAGAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: ANRNTDTHFHSC*ACFFCLKGQKC Trigger: ACACTTCTGCCCTTTGAGACAAAAGAAACAGGCCCAGCACGAGTGGAAGTGGGTGTCTGTGTTTCTGTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR GCA 72 bp | AACAGTATTCCCACTCATAACCTTCCCCAGCTTTCCTaGAACCTCCATGGATGGTGTCTGAACTTGACCAAC | + |
|
Preference number: 3 (lower is better) Translates to: NSIPTHNLPQLS*NLHGWCLNLTN Trigger: GTTGGTCAAGTTCAGACACCATCCATGGAGGTTGCAGGAAAGCTGGGGAAGGTTATGAGTGGGAATACTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR GCA 72 bp | AGAAAGACACAGGTGAGCAGGGTACCAACAGCAGGCTaGATGCATTCCAGGTATGATGCAGGAAAAGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: RKTQVSRVPTAG*MHSRYDAGKEN Trigger: GTTTTCTTTTCCTGCATCATACCTGGAATGCATGCAGCCTGCTGTTGGTACCCTGCTCACCTGTGTCTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR GCA 72 bp | CGGTGCAGAGGGGACATGGTGGCCAGACTCTTTACATaGCCACTGAATAAGCAAATTACTTTTGGTTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: RCRGDMVARLFT*PLNKQITFGCC Trigger: ACAGCAACCAAAAGTAATTTGCTTATTCAGTGGGCATGTAAAGAGTCTGGCCACCATGTCCCCTCTGCACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR CCA 72 bp | GAACTCCTGCTTCTTTCTGGAGGAAGGACCAGATCATaGAAAACAGCCTCTGATGAAGGCTACAAGACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: ELLLLSGGRTRS*KTASDEGYKTR Trigger: TCTGGTCTTGTAGCCTTCATCAGAGGCTGTTTTCCATGATCTGGTCCTTCCTCCAGAAAGAAGCAGGAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR CCA 72 bp | AAGGACTGGGTTTACAGGTGTGAGTGTTTTAGGGCATaGCTCACTGTCTTGCTTTCCTGCCAGGAAGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: KDWVYRCECFRA*LTVLLSCQEDK Trigger: TTTGTCTTCCTGGCAGGAAAGCAAGACAGTGAGCCATGCCCTAAAACACTCACACCTGTAAACCCAGTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR TCA 72 bp | CCACGCTATACCACCAGACTCGTTCTTCCATTAACCTaGCCTGCACACAGCAACCATTTCATTCCTAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: PRYTTRLVLPLT*PAHSNHFIPKM Trigger: CATCTTAGGAATGAAATGGTTGCTGTGTGCAGGTCAGGTTAATGGAAGAACGAGTCTGGTGGTATAGCGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR CCA 72 bp | GGCTCTGTGGACACAGACTTGCATGTGGTAGAACCCTaGTTCTACATTAACACTGCCCATTTAATGCACGAT | + |
|
Preference number: 3 (lower is better) Translates to: GSVDTDLHVVEP*FYINTAHLMHD Trigger: ATCGTGCATTAAATGGGCAGTGTTAATGTAGAACCAGGGTTCTACCACATGCAAGTCTGTGTCCACAGAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGAGCATTGGCAGGCAGAGGCAGGCAGATCTGTGTTTGAAACTAGCCTGGTTGGCTTCATTCTCCTTTaGAACATAAGTTATCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LEHWQAEAGRSVFETSLVGFILL*NISYLR Trigger: TCTCAGATAACTTATGTTCAAAAGGAGAATGAAGCC...AACCAGGCTAGTTTCAAACACAGATCTGCCTGCCTCTGCCTGCCAATGCTCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR-3UTR CAA 90 bp | TATTTCATGATTTTGCCTGGGTGGCTGTCACAGAAACAGTGCAAACAGAAACACCTGTCAACCCAGCCATaGACCACGACACATACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: YFMILPGWLSQKQCKQKHLSTQP*TTTHTE Trigger: TTCTGTATGTGTCGTGGTCAATGGCTGGGTTGACAG...GTGTTTCTGTTTGCACTGTTTCTGTGACAGCCACCCAGGCAAAATCATGAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR GCA 72 bp | AACAGAAAAACCAAGCCCCTTACACCCTATTTGCCCTaGTTTCTCAGAGGGCTTCAATGTTATTCACACACC | + |
|
Preference number: 3 (lower is better) Translates to: NRKTKPLTPYLP*FLRGLQCYSHT Trigger: GGTGTGTGAATAACATTGAAGCCCTCTGAGAAAGCAGGGCAAATAGGGTGTAAGGGGCTTGGTTTTTCTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR TCA 72 bp | GGAGGTAAGGAAGCCCAAACCATCTTTAGAAAATTGTaGCAGGTGCCCAAGGCTTATGTTAAATTCGCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: GGKEAQTIFRKL*QVPKAYVKFAR Trigger: TCTGGCGAATTTAACATAAGCCTTGGGCACCTGTCACAATTTTCTAAAGATGGTTTGGGCTTCCTTACCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR GCA 72 bp | CGCTCAAACATGATCATCTCGAGATCAAACTCACGGTaGTCAGAGCTTTTAGAAATGAAATTATCCCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: RSNMIISRSNSR*SELLEMKLSLL Trigger: GAGAAGGGATAATTTCATTTCTAAAAGCTCTGAGCACCGTGAGTTTGATCTCGAGATGATCATGTTTGAGCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR GCA 72 bp | AGGAAGCCCAAACCATCTTTAGAAAATTGTGACAGGTaGCCAAGGCTTATGTTAAATTCGCCAGAAAGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: RKPKPSLENCDR*PRLMLNSPESN Trigger: GTTACTTTCTGGCGAATTTAACATAAGCCTTGGGCACCTGTCACAATTTTCTAAAGATGGTTTGGGCTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR GCA 72 bp | TTTCGTGACAGAGGGCTTTCACTTTTATTAGGACCGTaGAAGAGAACTGACAGACATTTGAAACACTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: FRDRGLSLLLGP*KRTDRHLKHFT Trigger: TGTGAAGTGTTTCAAATGTCTGTCAGTTCTCTTGCACGGTCCTAATAAAAGTGAAAGCCCTCTGTCACGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR CCA 72 bp | CAATTTACAGAACCGAGTGTATTTCATGATTTTGCCTaGGTGGCTGTCACAGAAACAGTGCAAACAGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: QFTEPSVFHDFA*VAVTETVQTET Trigger: TGTTTCTGTTTGCACTGTTTCTGTGACAGCCACCCAGGCAAAATCATGAAATACACTCGGTTCTGTAAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR TCA 72 bp | TTTAAAGAAGCAATTTACAGAACCGAGTGTATTTCATaGTTTTGCCTGGGTGGCTGTCACAGAAACAGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: FKEAIYRTECIS*FCLGGCHRNSA Trigger: TGCACTGTTTCTGTGACAGCCACCCAGGCAAAATCATGAAATACACTCGGTTCTGTAAATTGCTTCTTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR GCA 72 bp | ACCGGGATGACAGAAATTCGTTCTATTCCTTTTGAATaGACATTTCTACATAATCGGAGGAAAAGAGCATCC | + |
|
Preference number: 3 (lower is better) Translates to: TGMTEIRSIPFE*TFLHNRRKRAS Trigger: GGATGCTCTTTTCCTCCGATTATGTAGAAATGTGCATTCAAAAGGAATAGAACGAATTTCTGTCATCCCGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| 3UTR TCA 72 bp | TCTATGTCAAAATGCAGCCCATTCTGTACTAGTGATTaGAAAGCAGACAGTGAGATAATTCAAGTAGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SMSKCSPFCTSD*KADSEIIQVGA Trigger: TGCTCCTACTTGAATTATCTCACTGTCTGCTTTTCAATCACTAGTACAGAATGGGCTGCATTTTGACATAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| CDS-3UTR TCA 90 bp | CCTGAAGCGTGGGGCTCCCAGGAGGAAAGGGGTGCATCTTCTAGTCCCTGGCCTACGGGACTGGCCCCGTaGAAGGGTGGTGGCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PEAWGSQEERGASSSPWPTGLAP*KGGGPG Trigger: TCCAGGGCCACCACCCTTTCACGGGGCCAGTCCCGT...AGGCCAGGGACTAGAAGATGCACCCCTTTCCTCCTGGGAGCCCCACGCTTCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| CDS-3UTR CCA 90 bp | GGCATGGCTCACTGTCTTGCTTTCCTGCCAGGAAGACAAAAGAAGGGGCCGGGCAGCCGGCGCAGGCGCTaGATGCGCTCGGGATCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GMAHCLAFLPGRQKKGPGSRRRR*MRSGSG Trigger: CCCGGATCCCGAGCGCATCCAGCGCCTGCGCCGGCT...GCCCGGCCCCTTCTTTTGTCTTCCTGGCAGGAAAGCAAGACAGTGAGCCATGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCCCAGGCCGGGAGGCAGAGGGGAATTCAAACTTCAGGATCAAAGAGCTTCGGGCGGCAGGCGAGGTaGGTACAAGGCCAGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QAQAGRQRGIQTSGSKSFGRQAR*VQGQQR Trigger: CCGCTGCTGGCCTTGTACGCACCTCGCCTGCCGCCC...GAAGCTCTTTGATCCTGAAGTTTGAATTCCCCTCTGCCTCCCGGCCTGGGCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS-3UTR GCA 90 bp | ACCCTTGAAAAGCAGGCCCGGGATGTGGAGCAGCCGCAGACAGAAAGTCACTTTGGGCGGCAGGCGAGGTaGGTACAAGGCCAGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TLEKQARDVEQPQTESHFGRQAR*VQGQQR Trigger: CCGCTGCTGGCCTTGTACGCACCTCGCCTGCCGCCC...AAAGTGACTTTCTGTCTGCGGCTGCTCCACATCCCGGGCCTGCTTTTCAAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGAACAAGCCCAGGCCGGGAGGCAGAGGGGAATTCAAACTTCAGGATCAAAGGCGCAGGCGCTGGATaGGCTCGGGATCCGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRTSPGREAEGNSNFRIKGAGAG*ARDPGW Trigger: CCACCCCGGATCCCGAGCGCATCCAGCGCCTGCGCC...TTTGATCCTGAAGTTTGAATTCCCCTCTGCCTCCCGGCCTGGGCTTGTTCTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS-3UTR GCA 90 bp | GAGCAGCCAGTGACAGCCCGTCAGAGCCTGTCCTGTGAATGGCTTCTGCCTGGTAAGCACATTGCGGGGTaGCTTCTTGCTGCGCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: EQPVTARQSLSCEWLLPGKHIAG*LLAAPR Trigger: CCGGGGCGCAGCAAGAAGGCACCCCGCAATGTGCTT...ACCAGGCAGAAGCCATTCACAGGACAGGCTCTGACGGGCTGTCACTGGCTGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| 3UTR CAA 72 bp | ACGGCGGAGCCACAGGGTGAGAGGTCGCCTCTTCAGTaGGAGCATTGGCAGGCAGAGGCAGGCAGATCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TAEPQGERSPLQ*EHWQAEAGRSV Trigger: CACAGATCTGCCTGCCTCTGCCTGCCAATGCTCCAACTGAAGAGGCGACCTCTCACCCTGTGGCTCCGCCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| CDS-3UTR GCA 90 bp | TGTCGGGCGCAGACCTCTGTGAGGCTGACAAGGACTAAGGGCAGCTCGGAGCTCCCTGGACTCCTCCCTTaGAGATGCCTGCAGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CRAQTSVRLTRTKGSSELPGLLP*RCLQGR Trigger: TCTTCCCTGCAGGCATCTGCAAGGGAGGAGTCCAGG...GAGCTCCGAGCTGCCCTTAGTCCTTGTCAGCCTCACAGAGGTCTGCGCCCGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGAACAAGCCCAGGCCGGGAGGCAGAGGGGAATTCAAACTTCAGGATCAAAACGGGACTGGCCCCGTaGAAGGGTGGTGGCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRTSPGREAEGNSNFRIKTGLAP*KGGGPG Trigger: TCCAGGGCCACCACCCTTTCACGGGGCCAGTCCCGT...TTTGATCCTGAAGTTTGAATTCCCCTCTGCCTCCCGGCCTGGGCTTGTTCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS-3UTR CCA 90 bp | ACCCTTGAAAAGCAGGCCCGGGATGTGGAGCAGCCGCAGACAGAAAGTCACTTTCGTTGGGGTAGGGAATaGGCGGCAGGCGAGGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: TLEKQARDVEQPQTESHFRWGRE*AAGEVR Trigger: ACGCACCTCGCCTGCCGCCCATTCCCTACCCCAACG...AAAGTGACTTTCTGTCTGCGGCTGCTCCACATCCCGGGCCTGCTTTTCAAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCCCAGGCCGGGAGGCAGAGGGGAATTCAAACTTCAGGATCAAAGAGCTTCCGTTGGGGTAGGGAATaGGCGGCAGGCGAGGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: QAQAGRQRGIQTSGSKSFRWGRE*AAGEVR Trigger: ACGCACCTCGCCTGCCGCCCATTCCCTACCCCAACG...GAAGCTCTTTGATCCTGAAGTTTGAATTCCCCTCTGCCTCCCGGCCTGGGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGCCTCCTGGGTAAGAAAGACACAGGTGAGCAGGGTACCAACAGCAGGCTGACTCCGCCACGTTGTTaGAGCAGGGCGCGTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSLLGKKDTGEQGTNSRLTPPRC*SRARWG Trigger: ACCCCAACGCGCCCTGCTTCAACAACGTGGCGGAGT...CAGCCTGCTGTTGGTACCCTGCTCACCTGTGTCTTTCTTACCCAGGAGGCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| CDS-3UTR TCA 90 bp | GAAAAGCAGGCCCGGGATGTGGAGCAGCCGCAGACAGAAAGTCACTTTCTCCTGCACCGCGGAGTCCCTTaGAGGTGCGGATGTGAACGT | + |
|
Preference number: 4 (lower is better) Translates to: EKQARDVEQPQTESHFLLHRGVP*RCGCER Trigger: ACGTTCACATCCGCACCTTCAAGGGACTCCGCGGTG...CAGGAGAAAGTGACTTTCTGTCTGCGGCTGCTCCACATCCCGGGCCTGCTTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGGTGGATGAGGGAACACTGCCACTCAGGGAGCACTGCTGGAGATAGAGTCCCGTGTAGTCCTCCCTaGCAGCTCAGACCTGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: TGWMREHCHSGSTAGDRVPCSPP*QLRPGL Trigger: GAGTCCAGGTCTGAGCTGTCAGGGAGGACTACACGG...GACTCTATCTCCAGCAGTGCTCCCTGAGTGGCAGTGTTCCCTCATCCACCCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGGTGGATGAGGGAACACTGCCACTCAGGGAGCACTGCTGGAGATAGAGTCTCTCGGATGCAGCGGTaGAGTTCACCCAGAGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: TGWMREHCHSGSTAGDRVSRMQR*SSPRGL Trigger: TAGCCCTCTGGGTGAACTGCACCGCTGCATCCGAGA...GACTCTATCTCCAGCAGTGCTCCCTGAGTGGCAGTGTTCCCTCATCCACCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTGAGCCAGCTCTGTGCCCTGCATGGGCAGGACCAGCGGGACTCACTCCGAGCTGGTAATCCACCTTaGGCTTTCGCTTTTTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: RVSQLCALHGQDQRDSLRAGNPP*AFAFSY Trigger: GTAAGAAAAAGCGAAAGCCCAAGGTGGATTACCAGC...TCGGAGTGAGTCCCGCTGGTCCTGCCCATGCAGGGCACAGAGCTGGCTCACCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGAACAAGCCCAGGCCGGGAGGCAGAGGGGAATTCAAACTTCAGGATCAAACCGTGTAGTCCTCCCTaGCAGCTCAGACCTGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: LRTSPGREAEGNSNFRIKPCSPP*QLRPGL Trigger: GAGTCCAGGTCTGAGCTGTCAGGGAGGACTACACGG...TTTGATCCTGAAGTTTGAATTCCCCTCTGCCTCCCGGCCTGGGCTTGTTCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS-3UTR TCA 90 bp | AGGGTGAGCCAGCTCTGTGCCCTGCATGGGCAGGACCAGCGGGACTCACTCCGACATTCTCGCCTCGAATaGAAATCTGATTTATGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RVSQLCALHGQDQRDSLRHSRLE*KSDLCA Trigger: GGCACATAAATCAGATTTTCATTCGAGGCGAGAATG...TCGGAGTGAGTCCCGCTGGTCCTGCCCATGCAGGGCACAGAGCTGGCTCACCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGCTTCAAGCTCCGAGCCTCACCCAGAGCTTCCAGACTCAGTGTACCTGCCCTGACAGCTCAGACCTaGACTCCTCCCTTGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: KSFKLRASPRASRLSVPALTAQT*TPPLQM Trigger: CATCTGCAAGGGAGGAGTCCAGGTCTGAGCTGTCAG...GGCAGGTACACTGAGTCTGGAAGCTCTGGGTGAGGCTCGGAGCTTGAAGCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGGTGGATGAGGGAACACTGCCACTCAGGGAGCACTGCTGGAGATAGAGTCCTGACAGCTCAGACCTaGACTCCTCCCTTGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: TGWMREHCHSGSTAGDRVLTAQT*TPPLQM Trigger: CATCTGCAAGGGAGGAGTCCAGGTCTGAGCTGTCAG...GACTCTATCTCCAGCAGTGCTCCCTGAGTGGCAGTGTTCCCTCATCCACCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGAACAAGCCCAGGCCGGGAGGCAGAGGGGAATTCAAACTTCAGGATCAAACCCGTGAAAGGGTGGTaGCCCTGGAGAAGGTACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LRTSPGREAEGNSNFRIKPVKGW*PWRRYL Trigger: GAGGTACCTTCTCCAGGGCCACCACCCTTTCACGGG...TTTGATCCTGAAGTTTGAATTCCCCTCTGCCTCCCGGCCTGGGCTTGTTCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTGCAAGCTGAGCACAGACAACAAACAGGCAGACCACTCTGTCAACCCAGCCCCGTGAAAGGGTGGTaGCCCTGGAGAAGGTACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLQAEHRQQTGRPLCQPSPVKGW*PWRRYL Trigger: GAGGTACCTTCTCCAGGGCCACCACCCTTTCACGGG...GCTGGGTTGACAGAGTGGTCTGCCTGTTTGTTGTCTGTGCTCAGCTTGCAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGCAGAGGGGAATTCAAACTTCAGGATCAAAGAGCTTCAAGCTCCGAGCCTGGCCCCGTGAAAGGGTaGTGGCCCTGGAGAAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GGRGEFKLQDQRASSSEPGPVKG*WPWRRY Trigger: GTACCTTCTCCAGGGCCACCACCCTTTCACGGGGCC...AGGCTCGGAGCTTGAAGCTCTTTGATCCTGAAGTTTGAATTCCCCTCTGCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS-3UTR TCA 90 bp | GCTGACCTGTCCTTCCAGAGGGTGAGCCAGCTCTGTGCCCTGCATGGGCAGGACCATTCTCGCCTCGAATaGAAATCTGATTTATGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ADLSFQRVSQLCALHGQDHSRLE*KSDLCA Trigger: GGCACATAAATCAGATTTTCATTCGAGGCGAGAATG...GTCCTGCCCATGCAGGGCACAGAGCTGGCTCACCCTCTGGAAGGACAGGTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS-3UTR GCA 90 bp | ACACAGACACCCACTTCCACTCGTGCTGGGCCTGTTTCTTTTGTCTCAAAGGGCTCTCGGATGCAGCGGTaGAGTTCACCCAGAGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: TQTPTSTRAGPVSFVSKGSRMQR*SSPRGL Trigger: TAGCCCTCTGGGTGAACTGCACCGCTGCATCCGAGA...GCCCTTTGAGACAAAAGAAACAGGCCCAGCACGAGTGGAAGTGGGTGTCTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| CDS-3UTR GCA 90 bp | AGAGCTTCAAGCTCCGAGCCTCACCCAGAGCTTCCAGACTCAGTGTACCTGCCCGGTGGAGTCCTCAACTaGAGATTTGGAATCCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RASSSEPHPELPDSVYLPGGVLN*RFGIRF Trigger: GAAGCGGATTCCAAATCTGCAGTTGAGGACTCCACC...GGGCAGGTACACTGAGTCTGGAAGCTCTGGGTGAGGCTCGGAGCTTGAAGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| 3UTR CAA 72 bp | ATGGAAGGACGTGTTCCTCTGAGAACTCCTGCTTCTTaGCTGGAGACTCGAGCAGCCAGTGACAGCCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MEGRVPLRTPAS*LETRAASDSPS Trigger: TGACGGGCTGTCACTGGCTGCTCGAGTCTCCAGCAAAGAAGCAGGAGTTCTCAGAGGAACACGTCCTTCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062458.6 |
||
| CDS-3UTR TCA 90 bp | CTTCAAGCTCCGAGCCTCACCCAGAGCTTCCAGACTCAGTGTACCTGCCCTGCCGATTTATGTGCCGAGTaGATACCTGCTGGTAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LQAPSLTQSFQTQCTCPADLCAE*IPAGNP Trigger: TGGATTACCAGCAGGTATTCACTCGGCACATAAATC...GGCAGGGCAGGTACACTGAGTCTGGAAGCTCTGGGTGAGGCTCGGAGCTTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS-3UTR GCA 90 bp | GAATGCACATTTCTACATAATCGGAGGAAAAGAGCATCCATTACAGCTTCTAGCGGGGTGCCTTCTTGCTaGGCCCCGGGCCCTGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: ECTFLHNRRKRASITASSGVPSC*APGPGV Trigger: GACGCCAGGGCCCGGGGCGCAGCAAGAAGGCACCCC...GCTAGAAGCTGTAATGGATGCTCTTTTCCTCCGATTATGTAGAAATGTGCATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGACTAGGATATAGCAGAGAACAGTTCATGCACTTTATTTCTACAACCCAAAGCCGGCGCAGGCGCTaGATGCGCTCGGGATCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRLGYSREQFMHFISTTQSRRRR*MRSGSG Trigger: CCCGGATCCCGAGCGCATCCAGCGCCTGCGCCGGCT...TTGGGTTGTAGAAATAAAGTGCATGAACTGTTCTCTGCTATATCCTAGTCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS-3UTR CCA 90 bp | CTTCAAGCTCCGAGCCTCACCCAGAGCTTCCAGACTCAGTGTACCTGCCCTGCCCCTCAACTGCAGATTTaGAATCCGCTTCCTTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQAPSLTQSFQTQCTCPAPQLQI*NPLPFW Trigger: CCAAAAAGGAAGCGGATTCCAAATCTGCAGTTGAGG...GGCAGGGCAGGTACACTGAGTCTGGAAGCTCTGGGTGAGGCTCGGAGCTTGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS-3UTR CCA 90 bp | ACCCTTGAAAAGCAGGCCCGGGATGTGGAGCAGCCGCAGACAGAAAGTCACTTTTTTTTCTTACGGGACTaGCCCCGTGAAAGGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TLEKQARDVEQPQTESHFFFLRD*PRERVV Trigger: CACCACCCTTTCACGGGGCCAGTCCCGTAAGAAAAA...AAAGTGACTTTCTGTCTGCGGCTGCTCCACATCCCGGGCCTGCTTTTCAAGGGT 54% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS-3UTR GCA 90 bp | ACCCTTGAAAAGCAGGCCCGGGATGTGGAGCAGCCGCAGACAGAAAGTCACTTTGGTGGAGTCCTCAACTaGAGATTTGGAATCCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TLEKQARDVEQPQTESHFGGVLN*RFGIRF Trigger: GAAGCGGATTCCAAATCTGCAGTTGAGGACTCCACC...AAAGTGACTTTCTGTCTGCGGCTGCTCCACATCCCGGGCCTGCTTTTCAAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| 3UTR CAA 72 bp | ATGCATACTCTCCCTTCAGTATCAGAACAGATACCCTaGAAAAGCAGGCCCGGGATGTGGAGCAGCCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: MHTLPSVSEQIP*KSRPGMWSSRR Trigger: TCTGCGGCTGCTCCACATCCCGGGCCTGCTTTTCAAGGGTATCTGTTCTGATACTGAAGGGAGAGTATGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS-3UTR TCA 90 bp | GGGAGACTAGGATATAGCAGAGAACAGTTCATGCACTTTATTTCTACAACCCAACGAAGCTGTAGGAGCTaGCGTCCAGCCGCGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRLGYSREQFMHFISTTQRSCRS*RPAAGW Trigger: CCAGCCCGCGGCTGGACGTCAGCTCCTACAGCTTCG...TTGGGTTGTAGAAATAAAGTGCATGAACTGTTCTCTGCTATATCCTAGTCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS-3UTR CCA 90 bp | CAAGCCCAGGCCGGGAGGCAGAGGGGAATTCAAACTTCAGGATCAAAGAGCTTCAGTATCGAGACAGGGTaGAGTCCTCAACTGCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: QAQAGRQRGIQTSGSKSFSIETG*SPQLQI Trigger: AATCTGCAGTTGAGGACTCCACCCTGTCTCGATACT...GAAGCTCTTTGATCCTGAAGTTTGAATTCCCCTCTGCCTCCCGGCCTGGGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGGAATTCAAACTTCAGGATCAAAGAGCTTCAAGCTCCGAGCCTCACCCAGTTTTTCTTACGGGACTaGCCCCGTGAAAGGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EGNSNFRIKELQAPSLTQFFLRD*PRERVV Trigger: CACCACCCTTTCACGGGGCCAGTCCCGTAAGAAAAA...CTGGGTGAGGCTCGGAGCTTGAAGCTCTTTGATCCTGAAGTTTGAATTCCCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS-3UTR GCA 90 bp | ATTCGTTCTATTCCTTTTGAATGCACATTTCTACATAATCGGAGGAAAAGAGCAGGCGCAGGCGCTGGATaGGCTCGGGATCCGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IRSIPFECTFLHNRRKRAGAGAG*ARDPGW Trigger: CCACCCCGGATCCCGAGCGCATCCAGCGCCTGCGCC...TGCTCTTTTCCTCCGATTATGTAGAAATGTGCATTCAAAAGGAATAGAACGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS-3UTR CCA 90 bp | GCTCCCAGGAGGAAAGGGGTGCATCTTCTAGTCCCTGGCCTCTTCTTTCCTCATCCTCAACTGCAGATTTaGAATCCGCTTCCTTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: APRRKGVHLLVPGLFFPHPQLQI*NPLPFW Trigger: CCAAAAAGGAAGCGGATTCCAAATCTGCAGTTGAGG...ATGAGGAAAGAAGAGGCCAGGGACTAGAAGATGCACCCCTTTCCTCCTGGGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGAACAGTGCTGTTTTTAGATGCATACTCTCCCTTCAGTATCAGAACAGATGGCCCCGTGAAAGGGTaGTGGCCCTGGAGAAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: WGTVLFLDAYSPFSIRTDGPVKG*WPWRRY Trigger: GTACCTTCTCCAGGGCCACCACCCTTTCACGGGGCC...ATCTGTTCTGATACTGAAGGGAGAGTATGCATCTAAAAACAGCACTGTTCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| 3UTR CAA 72 bp | GACACACCCGTCCTTCTTTCTAAGACCCTCACTGGCTaGACACGGGAATCCCTCTTTCACGTAACACCATTC | + |
|
Preference number: 4 (lower is better) Translates to: DTPVLLSKTLTG*TRESLFHVTPF Trigger: GAATGGTGTTACGTGAAAGAGGGATTCCCGTGTCAAGCCAGTGAGGGTCTTAGAAAGAAGGACGGGTGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| CDS-3UTR CCA 90 bp | GAGGGGAATTCAAACTTCAGGATCAAAGAGCTTCAAGCTCCGAGCCTCACCCAGAGTATCGAGACAGGGTaGAGTCCTCAACTGCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: EGNSNFRIKELQAPSLTQSIETG*SPQLQI Trigger: AATCTGCAGTTGAGGACTCCACCCTGTCTCGATACT...CTGGGTGAGGCTCGGAGCTTGAAGCTCTTTGATCCTGAAGTTTGAATTCCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS-3UTR CCA 90 bp | CTGAGAACAAGCCCAGGCCGGGAGGCAGAGGGGAATTCAAACTTCAGGATCAAAGCTGGTAATCCACCTTaGGCTTTCGCTTTTTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LRTSPGREAEGNSNFRIKAGNPP*AFAFSY Trigger: GTAAGAAAAAGCGAAAGCCCAAGGTGGATTACCAGC...TTTGATCCTGAAGTTTGAATTCCCCTCTGCCTCCCGGCCTGGGCTTGTTCTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS-3UTR TCA 90 bp | ATTCGTTCTATTCCTTTTGAATGCACATTTCTACATAATCGGAGGAAAAGAGCACGAAGCTGTAGGAGCTaGCGTCCAGCCGCGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IRSIPFECTFLHNRRKRARSCRS*RPAAGW Trigger: CCAGCCCGCGGCTGGACGTCAGCTCCTACAGCTTCG...TGCTCTTTTCCTCCGATTATGTAGAAATGTGCATTCAAAAGGAATAGAACGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS-3UTR TCA 90 bp | TTTTTAGATGCATACTCTCCCTTCAGTATCAGAACAGATACCCTTGAAAAGCAGACTCCGCCACGTTGTTaGAGCAGGGCGCGTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLDAYSPFSIRTDTLEKQTPPRC*SRARWG Trigger: ACCCCAACGCGCCCTGCTTCAACAACGTGGCGGAGT...CTGCTTTTCAAGGGTATCTGTTCTGATACTGAAGGGAGAGTATGCATCTAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS-3UTR TCA 90 bp | AAGAGCTTCAAGCTCCGAGCCTCACCCAGAGCTTCCAGACTCAGTGTACCTGCCTTTTTGGAGGAATCTTaGAGTTTCAGCCGATCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KSFKLRASPRASRLSVPAFLEES*SFSRSN Trigger: ATTTGATCGGCTGAAACTTCAAGATTCCTCCAAAAA...GGCAGGTACACTGAGTCTGGAAGCTCTGGGTGAGGCTCGGAGCTTGAAGCTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS-3UTR GCA 90 bp | GAATGCACATTTCTACATAATCGGAGGAAAAGAGCATCCATTACAGCTTCTAGCCCTGGACTCCTCCCTTaGAGATGCCTGCAGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ECTFLHNRRKRASITASSPGLLP*RCLQGR Trigger: TCTTCCCTGCAGGCATCTGCAAGGGAGGAGTCCAGG...GCTAGAAGCTGTAATGGATGCTCTTTTCCTCCGATTATGTAGAAATGTGCATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS-3UTR CCA 90 bp | CTTGAAAAGCAGGCCCGGGATGTGGAGCAGCCGCAGACAGAAAGTCACTTTCTCAATCCGCTTCCTTTTTaGAGGAATCTTGAAGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LEKQARDVEQPQTESHFLNPLPF*RNLEVS Trigger: TGAAACTTCAAGATTCCTCCAAAAAGGAAGCGGATT...GAGAAAGTGACTTTCTGTCTGCGGCTGCTCCACATCCCGGGCCTGCTTTTCAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS-3UTR TCA 90 bp | AGGATCAAAGAGCTTCAAGCTCCGAGCCTCACCCAGAGCTTCCAGACTCAGTGTTTTTTGGAGGAATCTTaGAGTTTCAGCCGATCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RIKELQAPSLTQSFQTQCFLEES*SFSRSN Trigger: ATTTGATCGGCTGAAACTTCAAGATTCCTCCAAAAA...ACACTGAGTCTGGAAGCTCTGGGTGAGGCTCGGAGCTTGAAGCTCTTTGATCCT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| 3UTR CAA 72 bp | GTGTCTGATGGGGAAACTGAGGCACATCTGCTGATATaGTCTGATGAGGCAGTGGTCCAAGCTAACAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSDGETEAHLLI*SDEAVVQANRK Trigger: TTTTCTGTTAGCTTGGACCACTGCCTCATCAGACAATATCAGCAGATGTGCCTCAGTTTCCCCATCAGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| 3UTR CAA 72 bp | GATACGGAGTTCAAGAACGGCTCTGTGGACACAGACTaGCATGTGGTAGAACCCTGGTTCTACATTAACACT | + |
|
Preference number: 4 (lower is better) Translates to: DTEFKNGSVDTD*HVVEPWFYINT Trigger: AGTGTTAATGTAGAACCAGGGTTCTACCACATGCAAGTCTGTGTCCACAGAGCCGTTCTTGAACTCCGTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
||
| 3UTR CAA 72 bp | CAAGCTAACAGAAAAACCAAGCCCCTTACACCCTATTaGCCCTGCTTTCTCAGAGGGCTTCAATGTTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: QANRKTKPLTPY*PCFLRGLQCYS Trigger: TGAATAACATTGAAGCCCTCTGAGAAAGCAGGGCAAATAGGGTGTAAGGGGCTTGGTTTTTCTGTTAGCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| CDS-3UTR TCA 90 bp | TGGGGAACAGTGCTGTTTTTAGATGCATACTCTCCCTTCAGTATCAGAACAGATGATTTATGTGCCGAGTaGATACCTGCTGGTAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: WGTVLFLDAYSPFSIRTDDLCAE*IPAGNP Trigger: TGGATTACCAGCAGGTATTCACTCGGCACATAAATC...ATCTGTTCTGATACTGAAGGGAGAGTATGCATCTAAAAACAGCACTGTTCCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| 3UTR CAA 72 bp | AGAAGCAATTTACAGAACCGAGTGTATTTCATGATTTaGCCTGGGTGGCTGTCACAGAAACAGTGCAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: RSNLQNRVYFMI*PGWLSQKQCKQ Trigger: CTGTTTGCACTGTTTCTGTGACAGCCACCCAGGCAAAATCATGAAATACACTCGGTTCTGTAAATTGCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| CDS-3UTR TCA 90 bp | TGGGGAACAGTGCTGTTTTTAGATGCATACTCTCCCTTCAGTATCAGAACAGATCCTCGAATGAAAATCTaGTTTATGTGCCGAGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: WGTVLFLDAYSPFSIRTDPRMKI*FMCRVN Trigger: ATTCACTCGGCACATAAATCAGATTTTCATTCGAGG...ATCTGTTCTGATACTGAAGGGAGAGTATGCATCTAAAAACAGCACTGTTCCCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS-3UTR TCA 90 bp | GGGAGACTAGGATATAGCAGAGAACAGTTCATGCACTTTATTTCTACAACCCAACCTCGAATGAAAATCTaGTTTATGTGCCGAGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GRLGYSREQFMHFISTTQPRMKI*FMCRVN Trigger: ATTCACTCGGCACATAAATCAGATTTTCATTCGAGG...TTGGGTTGTAGAAATAAAGTGCATGAACTGTTCTCTGCTATATCCTAGTCTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS CCA 90 bp | GGCGACGGGCCCTGGACGAGCTCCCGGCTCCCGTGGAGGTTCCGGTaGAGGTTCCCGCCGAGGCCGGCTCCCCCGTGCCCCGAGCCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: GDGPWTSSRLPWRFR*RFPPRPAPPCPEPD Trigger: GTCGGGCTCGGGGCACGGGGGAGCCGGCCTCGGCGGGAACCTCCACCGGAACCTCCACGGGAGCCGGGAGCTCGTCCAGGGCCCGTCGCC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS CCA 90 bp | GTGCCGTCCGTGTCCTCCTTGACCACCATGAGCCGGCGCAGGCGCTaGATGCGCTCGGGATCCGGGGTGGGCGCGGCGCGGCGACGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VPSVSSLTTMSRRRR*MRSGSGVGAARRRA Trigger: GGCCCGTCGCCGCGCCGCGCCCACCCCGGATCCCGAGCGCATCCAGCGCCTGCGCCGGCTCATGGTGGTCAAGGAGGACACGGACGGCAC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS CCA 90 bp | CGCGTAAGCACATTGCGGGGTGCCTTCTTGCTGCGCCCCGGGCCCTaGCGTCGCGCTCCGGCCGTGCCGTCCGTGTCCTCCTTGACCACC | + |
|
Preference number: 5 (lower is better) Translates to: RVSTLRGAFLLRPGP*RRAPAVPSVSSLTT Trigger: GGTGGTCAAGGAGGACACGGACGGCACGGCCGGAGCGCGACGCCAGGGCCCGGGGCGCAGCAAGAAGGCACCCCGCAATGTGCTTACGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS TCA 90 bp | CGGTGCGCCCGCCCTTCAGGAAGCTCTCGTACTCCGCCACGTTGTTaGAGCAGGGCGCGTTGGGGTAGGGAATGGGCGGCAGGCGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RCARPSGSSRTPPRC*SRARWGREWAAGEV Trigger: CACCTCGCCTGCCGCCCATTCCCTACCCCAACGCGCCCTGCTTCAACAACGTGGCGGAGTACGAGAGCTTCCTGAAGGGCGGGCGCACCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS GCA 90 bp | AGGGCTACCTTCATGCAAAGGCATCCGCGTAAGCACATTGCGGGGTaGCTTCTTGCTGCGCCCCGGGCCCTGGCGTCGCGCTCCGGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: RATFMQRHPRKHIAG*LLAAPRALASRSGR Trigger: ACGGCCGGAGCGCGACGCCAGGGCCCGGGGCGCAGCAAGAAGGCACCCCGCAATGTGCTTACGCGGATGCCTTTGCATGAAGGTAGCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS GCA 90 bp | GTTGAAGCAGGGCGCGTTGGGGTAGGGAATGGGCGGCAGGCGAGGTaGGTACAAGGCCAGCAGCGGGTCGAAGCTGTAGGAGCTGACGTC | + |
|
Preference number: 5 (lower is better) Translates to: VEAGRVGVGNGRQAR*VQGQQRVEAVGADV Trigger: GACGTCAGCTCCTACAGCTTCGACCCGCTGCTGGCCTTGTACGCACCTCGCCTGCCGCCCATTCCCTACCCCAACGCGCCCTGCTTCAAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS-3UTR CAA 90 bp | GCCAGCTCTGTGCCCTGCATGGGCAGGACCAGCGGGACTCACTCCGACTCGCACACCTGGACTCCTCCCTaGCAGATGCCTGCAGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ASSVPCMGRTSGTHSDSHTWTPP*QMPAGK Trigger: CTTCCCTGCAGGCATCTGCAAGGGAGGAGTCCAGGT...GTGCGAGTCGGAGTGAGTCCCGCTGGTCCTGCCCATGCAGGGCACAGAGCTGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS-3UTR CAA 90 bp | AGGGTGAGCCAGCTCTGTGCCCTGCATGGGCAGGACCAGCGGGACTCACTCCGATCGTACTCCGCCACGTaGTTGAAGCAGGGCGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RVSQLCALHGQDQRDSLRSYSAT*LKQGAL Trigger: CAACGCGCCCTGCTTCAACAACGTGGCGGAGTACGA...TCGGAGTGAGTCCCGCTGGTCCTGCCCATGCAGGGCACAGAGCTGGCTCACCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS-3UTR CAA 90 bp | AGAGCTTCAAGCTCCGAGCCTCACCCAGAGCTTCCAGACTCAGTGTACCTGCCCTACTCCGCCACGTTGTaGAAGCAGGGCGCGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RASSSEPHPELPDSVYLPYSATL*KQGALG Trigger: CCCCAACGCGCCCTGCTTCAACAACGTGGCGGAGTA...GGGCAGGTACACTGAGTCTGGAAGCTCTGGGTGAGGCTCGGAGCTTGAAGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS GCA 90 bp | CCCTCTCGGATGCAGCGGTGCAGTTCACCCAGAGGGCTACCTTCATaGAAAGGCATCCGCGTAAGCACATTGCGGGGTGCCTTCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSRMQRCSSPRGLPS*KGIRVSTLRGAFLL Trigger: CAGCAAGAAGGCACCCCGCAATGTGCTTACGCGGATGCCTTTGCATGAAGGTAGCCCTCTGGGTGAACTGCACCGCTGCATCCGAGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS CCA 90 bp | TGGGCTTTCGCTTTTTCTTACGGGACTGGCCCCGTGAAAGGGTGGTaGCCCTGGAGAAGGTACCTCCCACACTGGACCCTTCTGTCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: WAFAFSYGTGPVKGW*PWRRYLPHWTLLSV Trigger: CACGGACAGAAGGGTCCAGTGTGGGAGGTACCTTCTCCAGGGCCACCACCCTTTCACGGGGCCAGTCCCGTAAGAAAAAGCGAAAGCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS CCA 90 bp | CCTTGGGCTTTCGCTTTTTCTTACGGGACTGGCCCCGTGAAAGGGTaGTGGCCCTGGAGAAGGTACCTCCCACACTGGACCCTTCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PWAFAFSYGTGPVKG*WPWRRYLPHWTLLS Trigger: GGACAGAAGGGTCCAGTGTGGGAGGTACCTTCTCCAGGGCCACCACCCTTTCACGGGGCCAGTCCCGTAAGAAAAAGCGAAAGCCCAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS TCA 90 bp | AGGAAGCCAGTGCAGACACCGCGGAGTCCCTTGAAGGTGCGGATGTaGACGTTCACCTTGACTCCCTCTCGGATGCAGCGGTGCAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RKPVQTPRSPLKVRM*TFTLTPSRMQRCSS Trigger: TGAACTGCACCGCTGCATCCGAGAGGGAGTCAAGGTGAACGTTCACATCCGCACCTTCAAGGGACTCCGCGGTGTCTGCACTGGCTTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS-3UTR CAA 90 bp | CAAGCCCAGGCCGGGAGGCAGAGGGGAATTCAAACTTCAGGATCAAAGAGCTTCTACTCCGCCACGTTGTaGAAGCAGGGCGCGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QAQAGRQRGIQTSGSKSFYSATL*KQGALG Trigger: CCCCAACGCGCCCTGCTTCAACAACGTGGCGGAGTA...GAAGCTCTTTGATCCTGAAGTTTGAATTCCCCTCTGCCTCCCGGCCTGGGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS-3UTR CAA 90 bp | AGGATCAAAGAGCTTCAAGCTCCGAGCCTCACCCAGAGCTTCCAGACTCAGTGTACCTGGACTCCTCCCTaGCAGATGCCTGCAGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RIKELQAPSLTQSFQTQCTWTPP*QMPAGK Trigger: CTTCCCTGCAGGCATCTGCAAGGGAGGAGTCCAGGT...ACACTGAGTCTGGAAGCTCTGGGTGAGGCTCGGAGCTTGAAGCTCTTTGATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS-3UTR CAA 90 bp | GGCATGGCTCACTGTCTTGCTTTCCTGCCAGGAAGACAAAAGAAGGGGCCGGGCCTTCCAAGTAGATGTTaGGGAGTATCGAGACAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GMAHCLAFLPGRQKKGPGLPSRC*GVSRQG Trigger: ACCCTGTCTCGATACTCCCAAACATCTACTTGGAAG...GCCCGGCCCCTTCTTTTGTCTTCCTGGCAGGAAAGCAAGACAGTGAGCCATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| CDS CCA 90 bp | GTGTCCCCTCGTCCCCATACCGAAGCCACCTTCCAAGTAGATGTTTaGGAGTATCGAGACAGGGTGGAGTCCTCAACTGCAGATTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VSPRPHTEATFQVDV*EYRDRVESSTADLE Trigger: TTCCAAATCTGCAGTTGAGGACTCCACCCTGTCTCGATACTCCCAAACATCTACTTGGAAGGTGGCTTCGGTATGGGGACGAGGGGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS-3UTR CAA 90 bp | AGAACAAGCCCAGGCCGGGAGGCAGAGGGGAATTCAAACTTCAGGATCAAAGAGGCCATATTCCAGAACTaGTCGAAGGCGACGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RTSPGREAEGNSNFRIKEAIFQN*SKATRK Trigger: CTTCCTCGTCGCCTTCGACAAGTTCTGGAATATGGC...CTCTTTGATCCTGAAGTTTGAATTCCCCTCTGCCTCCCGGCCTGGGCTTGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS-3UTR CAA 90 bp | GGCATGGCTCACTGTCTTGCTTTCCTGCCAGGAAGACAAAAGAAGGGGCCGGGCTCCTCAACTGCAGATTaGGAATCCGCTTCCTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GMAHCLAFLPGRQKKGPGSSTAD*ESASFL Trigger: CAAAAAGGAAGCGGATTCCAAATCTGCAGTTGAGGA...GCCCGGCCCCTTCTTTTGTCTTCCTGGCAGGAAAGCAAGACAGTGAGCCATGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000129820.8 |
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| CDS-3UTR CAA 90 bp | CTTGAAAAGCAGGCCCGGGATGTGGAGCAGCCGCAGACAGAAAGTCACTTTCTCCTTCCAAGTAGATGTTaGGGAGTATCGAGACAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LEKQARDVEQPQTESHFLLPSRC*GVSRQG Trigger: ACCCTGTCTCGATACTCCCAAACATCTACTTGGAAG...GAGAAAGTGACTTTCTGTCTGCGGCTGCTCCACATCCCGGGCCTGCTTTTCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS-3UTR CAA 90 bp | ACCCTTGAAAAGCAGGCCCGGGATGTGGAGCAGCCGCAGACAGAAAGTCACTTTTCCTCAACTGCAGATTaGGAATCCGCTTCCTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TLEKQARDVEQPQTESHFSSTAD*ESASFL Trigger: CAAAAAGGAAGCGGATTCCAAATCTGCAGTTGAGGA...AAAGTGACTTTCTGTCTGCGGCTGCTCCACATCCCGGGCCTGCTTTTCAAGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS-3UTR CAA 90 bp | GGGAGACTAGGATATAGCAGAGAACAGTTCATGCACTTTATTTCTACAACCCAATCGTACTCCGCCACGTaGTTGAAGCAGGGCGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GRLGYSREQFMHFISTTQSYSAT*LKQGAL Trigger: CAACGCGCCCTGCTTCAACAACGTGGCGGAGTACGA...TTGGGTTGTAGAAATAAAGTGCATGAACTGTTCTCTGCTATATCCTAGTCTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS-3UTR CAA 90 bp | CTTGAAAAGCAGGCCCGGGATGTGGAGCAGCCGCAGACAGAAAGTCACTTTCTCCTTTTTGGAGGAATCTaGAAGTTTCAGCCGATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LEKQARDVEQPQTESHFLLFGGI*KFQPIK Trigger: TTTGATCGGCTGAAACTTCAAGATTCCTCCAAAAAG...GAGAAAGTGACTTTCTGTCTGCGGCTGCTCCACATCCCGGGCCTGCTTTTCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS-3UTR CAA 90 bp | CTGAGAACAAGCCCAGGCCGGGAGGCAGAGGGGAATTCAAACTTCAGGATCAAACTTTTTGGAGGAATCTaGAAGTTTCAGCCGATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LRTSPGREAEGNSNFRIKLFGGI*KFQPIK Trigger: TTTGATCGGCTGAAACTTCAAGATTCCTCCAAAAAG...TTTGATCCTGAAGTTTGAATTCCCCTCTGCCTCCCGGCCTGGGCTTGTTCTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS CCA 90 bp | ATGTTTGGGAGTATCGAGACAGGGTGGAGTCCTCAACTGCAGATTTaGAATCCGCTTCCTTTTTGGAGGAATCTTGAAGTTTCAGCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: MFGSIETGWSPQLQI*NPLPFWRNLEVSAD Trigger: ATCGGCTGAAACTTCAAGATTCCTCCAAAAAGGAAGCGGATTCCAAATCTGCAGTTGAGGACTCCACCCTGTCTCGATACTCCCAAACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS GCA 90 bp | CCAAGTAGATGTTTGGGAGTATCGAGACAGGGTGGAGTCCTCAACTaGAGATTTGGAATCCGCTTCCTTTTTGGAGGAATCTTGAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: PSRCLGVSRQGGVLN*RFGIRFLFGGILKF Trigger: AAACTTCAAGATTCCTCCAAAAAGGAAGCGGATTCCAAATCTGCAGTTGAGGACTCCACCCTGTCTCGATACTCCCAAACATCTACTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS TCA 90 bp | TCCTCAACTGCAGATTTGGAATCCGCTTCCTTTTTGGAGGAATCTTaGAGTTTCAGCCGATCAAATAGCCTAGTGAGAGTCAGCGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSTADLESASFLEES*SFSRSNSLVRVSEE Trigger: TTCTTCGCTGACTCTCACTAGGCTATTTGATCGGCTGAAACTTCAAGATTCCTCCAAAAAGGAAGCGGATTCCAAATCTGCAGTTGAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS GCA 72 bp | CCGGCTCCCCCGTGCCCCGAGCCCGACCGCGCCCGGTaGGCCCGCCCTTCAGGAAGCTCTCGTACTCCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PAPPCPEPDRAR*ARPSGSSRTPP Trigger: TGGCGGAGTACGAGAGCTTCCTGAAGGGCGGGCGCACCGGGCGCGGTCGGGCTCGGGGCACGGGGGAGCCGG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS CCA 72 bp | CCCTGGACGAGCTCCCGGCTCCCGTGGAGGTTCCGGTaGAGGTTCCCGCCGAGGCCGGCTCCCCCGTGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: PWTSSRLPWRFR*RFPPRPAPPCP Trigger: GGGGCACGGGGGAGCCGGCCTCGGCGGGAACCTCCACCGGAACCTCCACGGGAGCCGGGAGCTCGTCCAGGG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS CAA 90 bp | CCCGGGCCCTGGCGTCGCGCTCCGGCCGTGCCGTCCGTGTCCTCCTaGACCACCATGAGCCGGCGCAGGCGCTGGATGCGCTCGGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: PGPWRRAPAVPSVSS*TTMSRRRRWMRSGS Trigger: GGATCCCGAGCGCATCCAGCGCCTGCGCCGGCTCATGGTGGTCAAGGAGGACACGGACGGCACGGCCGGAGCGCGACGCCAGGGCCCGGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS CCA 72 bp | ACATTGCGGGGTGCCTTCTTGCTGCGCCCCGGGCCCTaGCGTCGCGCTCCGGCCGTGCCGTCCGTGTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TLRGAFLLRPGP*RRAPAVPSVSS Trigger: GGAGGACACGGACGGCACGGCCGGAGCGCGACGCCAGGGCCCGGGGCGCAGCAAGAAGGCACCCCGCAATGT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS CAA 72 bp | TGGCGTCGCGCTCCGGCCGTGCCGTCCGTGTCCTCCTaGACCACCATGAGCCGGCGCAGGCGCTGGATGCGC | + |
|
Preference number: 6 (lower is better) Translates to: WRRAPAVPSVSS*TTMSRRRRWMR Trigger: GCGCATCCAGCGCCTGCGCCGGCTCATGGTGGTCAAGGAGGACACGGACGGCACGGCCGGAGCGCGACGCCA 74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS TCA 72 bp | CGTACAAGGCCAGCAGCGGGTCGAAGCTGTAGGAGCTaGCGTCCAGCCGCGGGCTGGGCGGGCTGGCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RTRPAAGRSCRS*RPAAGWAGWLG Trigger: GCCCAGCCAGCCCGCCCAGCCCGCGGCTGGACGTCAGCTCCTACAGCTTCGACCCGCTGCTGGCCTTGTACG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS CAA 72 bp | AAAGGCATCCGCGTAAGCACATTGCGGGGTGCCTTCTaGCTGCGCCCCGGGCCCTGGCGTCGCGCTCCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: KGIRVSTLRGAF*LRPGPWRRAPA Trigger: GGCCGGAGCGCGACGCCAGGGCCCGGGGCGCAGCAAGAAGGCACCCCGCAATGTGCTTACGCGGATGCCTTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS TCA 72 bp | CTGCAGGGAAGAAGGGACGGAGCGGGAGCGCCTGTGTaGGCTCCGGTCAGTGTCCCCTCGTCCCCATACCGA | + |
|
Preference number: 6 (lower is better) Translates to: LQGRRDGAGAPV*APVSVPSSPYR Trigger: TCGGTATGGGGACGAGGGGACACTGACCGGAGCTCACACAGGCGCTCCCGCTCCGTCCCTTCTTCCCTGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS CAA 72 bp | GGGCTACCTTCATGCAAAGGCATCCGCGTAAGCACATaGCGGGGTGCCTTCTTGCTGCGCCCCGGGCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GLPSCKGIRVST*RGAFLLRPGPW Trigger: CCAGGGCCCGGGGCGCAGCAAGAAGGCACCCCGCAATGTGCTTACGCGGATGCCTTTGCATGAAGGTAGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS TCA 72 bp | CGCCCTTCAGGAAGCTCTCGTACTCCGCCACGTTGTTaGAGCAGGGCGCGTTGGGGTAGGGAATGGGCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RPSGSSRTPPRC*SRARWGREWAA Trigger: TGCCGCCCATTCCCTACCCCAACGCGCCCTGCTTCAACAACGTGGCGGAGTACGAGAGCTTCCTGAAGGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS TCA 72 bp | GTGCAGACACCGCGGAGTCCCTTGAAGGTGCGGATGTaGACGTTCACCTTGACTCCCTCTCGGATGCAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: VQTPRSPLKVRM*TFTLTPSRMQR Trigger: CCGCTGCATCCGAGAGGGAGTCAAGGTGAACGTTCACATCCGCACCTTCAAGGGACTCCGCGGTGTCTGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS TCA 72 bp | CTTGGGCTTTCGCTTTTTCTTACGGGACTGGCCCCGTaGAAGGGTGGTGGCCCTGGAGAAGGTACCTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LGLSLFLTGLAP*KGGGPGEGTSH Trigger: GTGGGAGGTACCTTCTCCAGGGCCACCACCCTTTCACGGGGCCAGTCCCGTAAGAAAAAGCGAAAGCCCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS GCA 72 bp | ATGCAGCGGTGCAGTTCACCCAGAGGGCTACCTTCATaGAAAGGCATCCGCGTAAGCACATTGCGGGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: MQRCSSPRGLPS*KGIRVSTLRGA Trigger: GGCACCCCGCAATGTGCTTACGCGGATGCCTTTGCATGAAGGTAGCCCTCTGGGTGAACTGCACCGCTGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS CCA 72 bp | GCTTTTTCTTACGGGACTGGCCCCGTGAAAGGGTGGTaGCCCTGGAGAAGGTACCTCCCACACTGGACCCTT | + |
|
Preference number: 6 (lower is better) Translates to: AFSYGTGPVKGW*PWRRYLPHWTL Trigger: AAGGGTCCAGTGTGGGAGGTACCTTCTCCAGGGCCACCACCCTTTCACGGGGCCAGTCCCGTAAGAAAAAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS CAA 72 bp | GTCTCATCCACGTCAGTGAGGGCCATATTCCAGAACTaGTCGAAGGCGACGAGGAAGCCAGTGCAGACACCG | + |
|
Preference number: 6 (lower is better) Translates to: VSSTSVRAIFQN*SKATRKPVQTP Trigger: CGGTGTCTGCACTGGCTTCCTCGTCGCCTTCGACAAGTTCTGGAATATGGCCCTCACTGACGTGGATGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS CCA 72 bp | CGTCCCCATACCGAAGCCACCTTCCAAGTAGATGTTTaGGAGTATCGAGACAGGGTGGAGTCCTCAACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RPHTEATFQVDV*EYRDRVESSTA Trigger: TGCAGTTGAGGACTCCACCCTGTCTCGATACTCCCAAACATCTACTTGGAAGGTGGCTTCGGTATGGGGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS CAA 72 bp | TCGTCCCCATACCGAAGCCACCTTCCAAGTAGATGTTaGGGAGTATCGAGACAGGGTGGAGTCCTCAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSPYRSHLPSRC*GVSRQGGVLNC Trigger: GCAGTTGAGGACTCCACCCTGTCTCGATACTCCCAAACATCTACTTGGAAGGTGGCTTCGGTATGGGGACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS CAA 90 bp | AGTGTCCCCTCGTCCCCATACCGAAGCCACCTTCCAAGTAGATGTTaGGGAGTATCGAGACAGGGTGGAGTCCTCAACTGCAGATTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SVPSSPYRSHLPSRC*GVSRQGGVLNCRFG Trigger: TCCAAATCTGCAGTTGAGGACTCCACCCTGTCTCGATACTCCCAAACATCTACTTGGAAGGTGGCTTCGGTATGGGGACGAGGGGACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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| CDS GCA 72 bp | TGTTTGGGAGTATCGAGACAGGGTGGAGTCCTCAACTaGAGATTTGGAATCCGCTTCCTTTTTGGAGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: CLGVSRQGGVLN*RFGIRFLFGGI Trigger: GATTCCTCCAAAAAGGAAGCGGATTCCAAATCTGCAGTTGAGGACTCCACCCTGTCTCGATACTCCCAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS CCA 72 bp | AGTATCGAGACAGGGTGGAGTCCTCAACTGCAGATTTaGAATCCGCTTCCTTTTTGGAGGAATCTTGAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SIETGWSPQLQI*NPLPFWRNLEV Trigger: AACTTCAAGATTCCTCCAAAAAGGAAGCGGATTCCAAATCTGCAGTTGAGGACTCCACCCTGTCTCGATACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS TCA 72 bp | GCAGATTTGGAATCCGCTTCCTTTTTGGAGGAATCTTaGAGTTTCAGCCGATCAAATAGCCTAGTGAGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: ADLESASFLEES*SFSRSNSLVRV Trigger: GACTCTCACTAGGCTATTTGATCGGCTGAAACTTCAAGATTCCTCCAAAAAGGAAGCGGATTCCAAATCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
||
| CDS CCA 72 bp | AGTCCTCAACTGCAGATTTGGAATCCGCTTCCTTTTTaGAGGAATCTTGAAGTTTCAGCCGATCAAATAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SPQLQIWNPLPF*RNLEVSADQIA Trigger: GGCTATTTGATCGGCTGAAACTTCAAGATTCCTCCAAAAAGGAAGCGGATTCCAAATCTGCAGTTGAGGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062458.6 ENSMUST00000129820.8 |
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