Pregenerated sensors for LSG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022538Ensembl transcript IDs: ENSMUST00000117363.9
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACAGTGCAGTGGTCAGGAGAGCAGCACGGCAGCGACAGCAGCAGTaGCGGTTTGAGCTCGTGTCCTCCCGCACAGCGCAGCTGCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: HSAVVRRAARQRQQQ*RFELVSSRTAQLPA Trigger: GGCAGGCAGCTGCGCTGTGCGGGAGGACACGAGCTCAAACCGCCACTGCTGCTGTCGCTGCCGTGCTGCTCTCCTGACCACTGCACTGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| 3UTR GCA 90 bp | TCTGGTGCGACTGTGCTCTCCAGGAGAGCAGGGTCCAGTCCACAGTaGAGTGGTCAGGAGAGCAGCACGGCAGCGACAGCAGCAGTGGCG | + |
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Preference number: 1 (lower is better) Translates to: SGATVLSRRAGSSPQ*SGQESSTAATAAVA Trigger: CGCCACTGCTGCTGTCGCTGCCGTGCTGCTCTCCTGACCACTGCACTGTGGACTGGACCCTGCTCTCCTGGAGAGCACAGTCGCACCAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| 3UTR CCA 90 bp | TGCGACTGTGCTCTCCAGGAGAGCAGGGTCCAGTCCACAGTGCAGTaGTCAGGAGAGCAGCACGGCAGCGACAGCAGCAGTGGCGGTTTG | + |
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Preference number: 1 (lower is better) Translates to: CDCALQESRVQSTVQ*SGEQHGSDSSSGGL Trigger: CAAACCGCCACTGCTGCTGTCGCTGCCGTGCTGCTCTCCTGACCACTGCACTGTGGACTGGACCCTGCTCTCCTGGAGAGCACAGTCGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| 3UTR GCA 90 bp | TGCTTCCGAAAGGCTGTCTTGATGTCAAGACTTCTGGTGCGACTGTaGTCTCCAGGAGAGCAGGGTCCAGTCCACAGTGCAGTGGTCAGG | + |
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Preference number: 1 (lower is better) Translates to: CFRKAVLMSRLLVRL*SPGEQGPVHSAVVR Trigger: CCTGACCACTGCACTGTGGACTGGACCCTGCTCTCCTGGAGAGCACAGTCGCACCAGAAGTCTTGACATCAAGACAGCCTTTCGGAAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| 3UTR GCA 90 bp | CATTTGTGTGTCTGGTACCCATCAGAGCCAGAAGAAGTCATTAGATaGCCTAACACTGGAGTTATCGATGGCTATGAGCTGCCATGTAGG | + |
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Preference number: 1 (lower is better) Translates to: HLCVWYPSEPEEVIR*PNTGVIDGYELPCR Trigger: CCTACATGGCAGCTCATAGCCATCGATAACTCCAGTGTTAGGGCATCTAATGACTTCTTCTGGCTCTGATGGGTACCAGACACACAAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| 3UTR GCA 90 bp | ATGTGTGCTGTTTATGTGTATGGGTGTTTTGCCTGCATGAATGTCTaGGTACCATTTGTGTGTCTGGTACCCATCAGAGCCAGAAGAAGT | + |
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Preference number: 1 (lower is better) Translates to: MCAVYVYGCFACMNV*VPFVCLVPIRARRS Trigger: ACTTCTTCTGGCTCTGATGGGTACCAGACACACAAATGGTACGCAGACATTCATGCAGGCAAAACACCCATACACATAAACAGCACACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| 3UTR-3UTR GCA 90 bp | TGGGTGTTTTGCCTGCATGAATGTCTGCGTACCATTTGTGTGTCTGGTACCCATCCCGCACAGCGCAGCTaGCTGCCGTCTCTGTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: WVFCLHECLRTICVSGTHPAQRS*LPSLFS Trigger: GCTGAACAGAGACGGCAGGCAGCTGCGCTGTGCGGG...ATGGGTACCAGACACACAAATGGTACGCAGACATTCATGCAGGCAAAACACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCATGAATGTCTGCGTACCATTTGTGTGTCTGGTACCCATCAGAGCCAGAAGCAGTCCACAGTGCAGTaGTCAGGAGAGCAGCACGGC | + |
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Preference number: 2 (lower is better) Translates to: LHECLRTICVSGTHQSQKQSTVQ*SGEQHG Trigger: GCCGTGCTGCTCTCCTGACCACTGCACTGTGGACTG...CTTCTGGCTCTGATGGGTACCAGACACACAAATGGTACGCAGACATTCATGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| 3UTR-3UTR GCA 90 bp | CTGCATGAATGTCTGCGTACCATTTGTGTGTCTGGTACCCATCAGAGCCAGAAGTGTCAAGACTTCTGGTaGGACTGTGCTCTCCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: LHECLRTICVSGTHQSQKCQDFW*DCALQE Trigger: CTCCTGGAGAGCACAGTCGCACCAGAAGTCTTGACA...CTTCTGGCTCTGATGGGTACCAGACACACAAATGGTACGCAGACATTCATGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| 3UTR-3UTR GCA 90 bp | CTGCATGAATGTCTGCGTACCATTTGTGTGTCTGGTACCCATCAGAGCCAGAAGTATCCACCATCCTTCTaGAGGATGAGACTTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: LHECLRTICVSGTHQSQKYPPSF*RMRLLG Trigger: CCCCAGAAGTCTCATCCTGCAGAAGGATGGTGGATA...CTTCTGGCTCTGATGGGTACCAGACACACAAATGGTACGCAGACATTCATGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| 3UTR-3UTR GCA 90 bp | GCCTGCATGAATGTCTGCGTACCATTTGTGTGTCTGGTACCCATCAGAGCCAGACAATGTGCATTTGTATaGTTGTACACATATCCACCA | + |
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Preference number: 2 (lower is better) Translates to: ACMNVCVPFVCLVPIRARQCAFV*LYTYPP Trigger: TGGTGGATATGTGTACAAGCATACAAATGCACATTG...TCTGGCTCTGATGGGTACCAGACACACAAATGGTACGCAGACATTCATGCAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| 3UTR-3UTR GCA 90 bp | TGGGTGTTTTGCCTGCATGAATGTCTGCGTACCATTTGTGTGTCTGGTACCCATACCTCAAAGTCAATGTaGATTTGTATGCTTGTACAC | + |
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Preference number: 2 (lower is better) Translates to: WVFCLHECLRTICVSGTHTSKSM*ICMLVH Trigger: GTGTACAAGCATACAAATGCACATTGACTTTGAGGT...ATGGGTACCAGACACACAAATGGTACGCAGACATTCATGCAGGCAAAACACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| 3UTR TCA 72 bp | GAGAGCAGCACGGCAGCGACAGCAGCAGTGGCGGTTTaGGCTCGTGTCCTCCCGCACAGCGCAGCTGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: ESSTAATAAVAV*ARVLPHSAAAC Trigger: GCAGGCAGCTGCGCTGTGCGGGAGGACACGAGCTCAAACCGCCACTGCTGCTGTCGCTGCCGTGCTGCTCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| 3UTR CCA 72 bp | GTGGTCAGGAGAGCAGCACGGCAGCGACAGCAGCAGTaGCGGTTTGAGCTCGTGTCCTCCCGCACAGCGCAG | + |
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Preference number: 3 (lower is better) Translates to: VVRRAARQRQQQ*RFELVSSRTAQ Trigger: CTGCGCTGTGCGGGAGGACACGAGCTCAAACCGCCACTGCTGCTGTCGCTGCCGTGCTGCTCTCCTGACCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| 3UTR TCA 72 bp | ACCACGGCCACAGCAGGTGCTTCCGAAAGGCTGTCTTaGTGTCAAGACTTCTGGTGCGACTGTGCTCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: TTATAGASERLS*CQDFWCDCALQ Trigger: CTGGAGAGCACAGTCGCACCAGAAGTCTTGACATCAAGACAGCCTTTCGGAAGCACCTGCTGTGGCCGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| 3UTR GCA 72 bp | TCTGGGGCACCCCATGACTACCACGGCCACAGCAGGTaGTTCCGAAAGGCTGTCTTGATGTCAAGACTTCTG | + |
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Preference number: 3 (lower is better) Translates to: SGAPHDYHGHSR*FRKAVLMSRLL Trigger: CAGAAGTCTTGACATCAAGACAGCCTTTCGGAAGCACCTGCTGTGGCCGTGGTAGTCATGGGGTGCCCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| 3UTR GCA 72 bp | AAGGCTGTCTTGATGTCAAGACTTCTGGTGCGACTGTaGTCTCCAGGAGAGCAGGGTCCAGTCCACAGTGCA | + |
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Preference number: 3 (lower is better) Translates to: KAVLMSRLLVRL*SPGEQGPVHSA Trigger: TGCACTGTGGACTGGACCCTGCTCTCCTGGAGAGCACAGTCGCACCAGAAGTCTTGACATCAAGACAGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| 3UTR TCA 72 bp | GGAGCCGAGGAAGCCCAGGGAGACTGGAGTCCTGAGTaGATGTGTGCTGTTTATGTGTATGGGTGTTTTGCC | + |
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Preference number: 3 (lower is better) Translates to: GAEEAQGDWSPE*MCAVYVYGCFA Trigger: GGCAAAACACCCATACACATAAACAGCACACATTCACTCAGGACTCCAGTCTCCCTGGGCTTCCTCGGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| 3UTR TCA 72 bp | CTAGGGAGCCGAGGAAGCCCAGGGAGACTGGAGTCCTaGGTGAATGTGTGCTGTTTATGTGTATGGGTGTTT | + |
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Preference number: 3 (lower is better) Translates to: LGSRGSPGRLES*VNVCCLCVWVF Trigger: AAACACCCATACACATAAACAGCACACATTCACTCAGGACTCCAGTCTCCCTGGGCTTCCTCGGCTCCCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| 3UTR GCA 72 bp | GCATTTGTATGCTTGTACACATATCCACCATCCTTCTaGAGGATGAGACTTCTGGGGCACCCCATGACTACC | + |
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Preference number: 3 (lower is better) Translates to: AFVCLYTYPPSF*RMRLLGHPMTT Trigger: GGTAGTCATGGGGTGCCCCAGAAGTCTCATCCTGCAGAAGGATGGTGGATATGTGTACAAGCATACAAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| 3UTR GCA 72 bp | GTCTGGTACCCATCAGAGCCAGAAGAAGTCATTAGATaGCCTAACACTGGAGTTATCGATGGCTATGAGCTG | + |
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Preference number: 3 (lower is better) Translates to: VWYPSEPEEVIR*PNTGVIDGYEL Trigger: CAGCTCATAGCCATCGATAACTCCAGTGTTAGGGCATCTAATGACTTCTTCTGGCTCTGATGGGTACCAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| 3UTR GCA 72 bp | TTTATGTTTAAAAGGGGGCAGAGGTGGAACCAAGTGTaGAAATCCATAAGCCCTCTGCAGGCCATTCTCGTT | + |
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Preference number: 3 (lower is better) Translates to: FMFKRGQRWNQV*KSISPLQAILV Trigger: AACGAGAATGGCCTGCAGAGGGCTTATGGATTTGCACACTTGGTTCCACCTCTGCCCCCTTTTAAACATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| 3UTR CCA 72 bp | TTTCGTTTCTATGGGTTTGAGCAAGTGCTTCCCCCATaGGGTGATGCTTTCTGGAGTGTCCCATTCTGTAAT | + |
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Preference number: 3 (lower is better) Translates to: FRFYGFEQVLPP*GDAFWSVPFCN Trigger: ATTACAGAATGGGACACTCCAGAAAGCATCACCCCATGGGGGAAGCACTTGCTCAAACCCATAGAAACGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| 3UTR-3UTR CAA 90 bp | ATGTGCATTTGTATGCTTGTACACATATCCACCATCCTTCTGCAGGATGAGACTTTCCGAAAGGCTGTCTaGATGTCAAGACTTCTGGTG | + |
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Preference number: 3 (lower is better) Translates to: MCICMLVHISTILLQDETFRKAV*MSRLLV Trigger: CACCAGAAGTCTTGACATCAAGACAGCCTTTCGGAA...AGTCTCATCCTGCAGAAGGATGGTGGATATGTGTACAAGCATACAAATGCACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| 3UTR GCA 72 bp | AACTTCCCAAAACCTCAAAGTCAATGTGCATTTGTATaGTTGTACACATATCCACCATCCTTCTGCAGGATG | + |
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Preference number: 3 (lower is better) Translates to: NFPKPQSQCAFV*LYTYPPSFCRM Trigger: CATCCTGCAGAAGGATGGTGGATATGTGTACAAGCATACAAATGCACATTGACTTTGAGGTTTTGGGAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| 3UTR CAA 72 bp | GGAGAGCAGCACGGCAGCGACAGCAGCAGTGGCGGTTaGAGCTCGTGTCCTCCCGCACAGCGCAGCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: GEQHGSDSSSGG*SSCPPAQRSCL Trigger: CAGGCAGCTGCGCTGTGCGGGAGGACACGAGCTCAAACCGCCACTGCTGCTGTCGCTGCCGTGCTGCTCTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR CCA 90 bp | AGCAGTGGCGGTTTGAGCTCGTGTCCTCCCGCACAGCGCAGCTGCCTGCCGTCTCGTGCAGATCGAGGCTaGTCTGGCTGCCCATGTGCT | + |
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Preference number: 4 (lower is better) Translates to: SSGGLSSCPPAQRSCLPSRADRG*SGCPCA Trigger: AGCACATGGGCAGCCAGACCAGCCTCGATCTGCACG...AGACGGCAGGCAGCTGCGCTGTGCGGGAGGACACGAGCTCAAACCGCCACTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR GCA 90 bp | GACAGCAGCAGTGGCGGTTTGAGCTCGTGTCCTCCCGCACAGCGCAGCTGCCTGCAGTATGACGGTGGCTaGGGCTTCGCTGAGTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: DSSSGGLSSCPPAQRSCLQYDGG*GFAESA Trigger: AGCAGACTCAGCGAAGCCGCAGCCACCGTCATACTG...CAGGCAGCTGCGCTGTGCGGGAGGACACGAGCTCAAACCGCCACTGCTGCTGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR GCA 90 bp | GACAGCAGCAGTGGCGGTTTGAGCTCGTGTCCTCCCGCACAGCGCAGCTGCCTGGCCCAGGCAAACCGCTaGTCAGCAGTCAGCAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: DSSSGGLSSCPPAQRSCLAQANR*SAVSKS Trigger: AGACTTGCTGACTGCTGAGCAGCGGTTTGCCTGGGC...CAGGCAGCTGCGCTGTGCGGGAGGACACGAGCTCAAACCGCCACTGCTGCTGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR CCA 90 bp | GACAGCAGCAGTGGCGGTTTGAGCTCGTGTCCTCCCGCACAGCGCAGCTGCCTGATGACCCTCCAGAGCTaGCGCCAGAAGTCCAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: DSSSGGLSSCPPAQRSCLMTLQS*RQKSKF Trigger: GAACTTGGACTTCTGGCGCCAGCTCTGGAGGGTCAT...CAGGCAGCTGCGCTGTGCGGGAGGACACGAGCTCAAACCGCCACTGCTGCTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR GCA 90 bp | AGCAGTGGCGGTTTGAGCTCGTGTCCTCCCGCACAGCGCAGCTGCCTGCCGTCTCCTTCCTTTTCAAAGTaGACAGCCCAGGCAAACCGC | + |
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Preference number: 4 (lower is better) Translates to: SSGGLSSCPPAQRSCLPSPSFSK*TAQANR Trigger: GCGGTTTGCCTGGGCTGTGCACTTTGAAAAGGAAGG...AGACGGCAGGCAGCTGCGCTGTGCGGGAGGACACGAGCTCAAACCGCCACTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR CCA 90 bp | GGTGCGACTGTGCTCTCCAGGAGAGCAGGGTCCAGTCCACAGTGCAGTGGTCAGATGCTTGGTGTGGCCTaGCGTGGCAGACACCGATAC | + |
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Preference number: 4 (lower is better) Translates to: GATVLSRRAGSSPQCSGQMLGVA*RGRHRY Trigger: GTATCGGTGTCTGCCACGCCAGGCCACACCAAGCAT...CTGACCACTGCACTGTGGACTGGACCCTGCTCTCCTGGAGAGCACAGTCGCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR GCA 90 bp | CGACAGCAGCAGTGGCGGTTTGAGCTCGTGTCCTCCCGCACAGCGCAGCTGCCTTGCAAGTTCTGCAGTTaGAAGAAAGTCCTCCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: RQQQWRFELVSSRTAQLPCKFCS*KKVLQG Trigger: TCCCTGGAGGACTTTCTTGCAACTGCAGAACTTGCA...AGGCAGCTGCGCTGTGCGGGAGGACACGAGCTCAAACCGCCACTGCTGCTGTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR CCA 90 bp | CGACAGCAGCAGTGGCGGTTTGAGCTCGTGTCCTCCCGCACAGCGCAGCTGCCTCATTCGCATCCAAACTaGAGCTTTCAGACTCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: RQQQWRFELVSSRTAQLPHSHPN*SFQTLF Trigger: AAACAGAGTCTGAAAGCTCCAGTTTGGATGCGAATG...AGGCAGCTGCGCTGTGCGGGAGGACACGAGCTCAAACCGCCACTGCTGCTGTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR CCA 90 bp | CGACAGCAGCAGTGGCGGTTTGAGCTCGTGTCCTCCCGCACAGCGCAGCTGCCTGATCAAGTCTCTGTGTaGGATTTCATTCGCATCCAA | + |
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Preference number: 4 (lower is better) Translates to: RQQQWRFELVSSRTAQLPDQVSV*DFIRIQ Trigger: TTGGATGCGAATGAAATCCCACACAGAGACTTGATC...AGGCAGCTGCGCTGTGCGGGAGGACACGAGCTCAAACCGCCACTGCTGCTGTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR GCA 90 bp | GGTGCGACTGTGCTCTCCAGGAGAGCAGGGTCCAGTCCACAGTGCAGTGGTCAGGACAGTCCTCATATTTaGTGTCACCACTGTCACTTG | + |
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Preference number: 4 (lower is better) Translates to: GATVLSRRAGSSPQCSGQDSPHI*CHHCHL Trigger: CAAGTGACAGTGGTGACAGCAAATATGAGGACTGTC...CTGACCACTGCACTGTGGACTGGACCCTGCTCTCCTGGAGAGCACAGTCGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR CCA 90 bp | CGACTGTGCTCTCCAGGAGAGCAGGGTCCAGTCCACAGTGCAGTGGTCAGGAGAGGATCACGTTCTCCTTaGCAGCATCGATCTCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: RLCSPGEQGPVHSAVVRRGSRSP*QHRSLS Trigger: TGAAAGAGATCGATGCTGCCAAGGAGAACGTGATCC...TCTCCTGACCACTGCACTGTGGACTGGACCCTGCTCTCCTGGAGAGCACAGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| 3UTR CAA 72 bp | TACCACGGCCACAGCAGGTGCTTCCGAAAGGCTGTCTaGATGTCAAGACTTCTGGTGCGACTGTGCTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: YHGHSRCFRKAV*MSRLLVRLCSP Trigger: TGGAGAGCACAGTCGCACCAGAAGTCTTGACATCAAGACAGCCTTTCGGAAGCACCTGCTGTGGCCGTGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| 3UTR CAA 72 bp | TGTGCGCTTGAATGCTCTGGTCAGAGTCCTCCCGCTTaGGTAGACTCCAGAGACCAGACTAAGGTCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: CALECSGQSPPA*VDSRDQTKVSR Trigger: CCTGCTGACCTTAGTCTGGTCTCTGGAGTCTACCAAAGCGGGAGGACTCTGACCAGAGCATTCAAGCGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR TCA 90 bp | GGTGCGACTGTGCTCTCCAGGAGAGCAGGGTCCAGTCCACAGTGCAGTGGTCAGAGTTTCTGCCAAAGCTaGCCAGAAGATAACCTTTAC | + |
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Preference number: 4 (lower is better) Translates to: GATVLSRRAGSSPQCSGQSFCQS*PEDNLY Trigger: GTAAAGGTTATCTTCTGGTCAGCTTTGGCAGAAACT...CTGACCACTGCACTGTGGACTGGACCCTGCTCTCCTGGAGAGCACAGTCGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR CCA 90 bp | CGACTGTGCTCTCCAGGAGAGCAGGGTCCAGTCCACAGTGCAGTGGTCAGGAGACGAGCATCTACGATCTaGACCACAATATCACTTCTC | + |
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Preference number: 4 (lower is better) Translates to: RLCSPGEQGPVHSAVVRRRASTI*TTISLL Trigger: GAGAAGTGATATTGTGGTCCAGATCGTAGATGCTCG...TCTCCTGACCACTGCACTGTGGACTGGACCCTGCTCTCCTGGAGAGCACAGTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR TCA 90 bp | CTGCATGAATGTCTGCGTACCATTTGTGTGTCTGGTACCCATCAGAGCCAGAAGCGGGCTTGTAACCCATaGCAGCCTGGACACCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: LHECLRTICVSGTHQSQKRACNP*QPGHLW Trigger: CCAAAGGTGTCCAGGCTGTCATGGGTTACAAGCCCG...CTTCTGGCTCTGATGGGTACCAGACACACAAATGGTACGCAGACATTCATGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR GCA 90 bp | GCCTGCATGAATGTCTGCGTACCATTTGTGTGTCTGGTACCCATCAGAGCCAGACGAGGCTGGTCTGGCTaGCCATGTGCTGTCATGAAT | + |
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Preference number: 4 (lower is better) Translates to: ACMNVCVPFVCLVPIRARRGWSG*PCAVMN Trigger: ATTCATGACAGCACATGGGCAGCCAGACCAGCCTCG...TCTGGCTCTGATGGGTACCAGACACACAAATGGTACGCAGACATTCATGCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR CCA 90 bp | GGTGCGACTGTGCTCTCCAGGAGAGCAGGGTCCAGTCCACAGTGCAGTGGTCAGTTGTTTCAGTTCTTCTaGGCTAGTTTTTCTGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: GATVLSRRAGSSPQCSGQLFQFF*ASFSVP Trigger: TGGGACAGAAAAACTAGCCCAGAAGAACTGAAACAA...CTGACCACTGCACTGTGGACTGGACCCTGCTCTCCTGGAGAGCACAGTCGCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR CCA 90 bp | GGTGCGACTGTGCTCTCCAGGAGAGCAGGGTCCAGTCCACAGTGCAGTGGTCAGACTTTCTTTCCAGTGTaGAGTTTCTTAAAGAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: GATVLSRRAGSSPQCSGQTFFPV*SFLKSS Trigger: GGAACTCTTTAAGAAACTCCACACTGGAAAGAAAGT...CTGACCACTGCACTGTGGACTGGACCCTGCTCTCCTGGAGAGCACAGTCGCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR CCA 90 bp | CTGCATGAATGTCTGCGTACCATTTGTGTGTCTGGTACCCATCAGAGCCAGAAGAGATCGAGGCTGGTCTaGCTGCCCATGTGCTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: LHECLRTICVSGTHQSQKRSRLV*LPMCCH Trigger: ATGACAGCACATGGGCAGCCAGACCAGCCTCGATCT...CTTCTGGCTCTGATGGGTACCAGACACACAAATGGTACGCAGACATTCATGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR CCA 90 bp | CATGGGGTGATGCTTTCTGGAGTGTCCCATTCTGTAATTAGTGTGCGCTTGAATAGGAGCTGCTGGTGTTaGTGCTGGAACGCCACAGGG | + |
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Preference number: 4 (lower is better) Translates to: HGVMLSGVSHSVISVRLNRSCWC*CWNATG Trigger: CCCTGTGGCGTTCCAGCACCAACACCAGCAGCTCCT...ATTCAAGCGCACACTAATTACAGAATGGGACACTCCAGAAAGCATCACCCCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR TCA 90 bp | ATGTGCATTTGTATGCTTGTACACATATCCACCATCCTTCTGCAGGATGAGACTAGCCAGGAGTCAGTATaGCGGTGGCTGCGGCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: MCICMLVHISTILLQDETSQESV*RWLRLR Trigger: GCGAAGCCGCAGCCACCGTCATACTGACTCCTGGCT...AGTCTCATCCTGCAGAAGGATGGTGGATATGTGTACAAGCATACAAATGCACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR GCA 90 bp | GCCTGCATGAATGTCTGCGTACCATTTGTGTGTCTGGTACCCATCAGAGCCAGACACAAACTCGGTCCCTaGAAGTTCTGCAGTTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ACMNVCVPFVCLVPIRARHKLGP*KFCSCK Trigger: CTTGCAACTGCAGAACTTGCAGGGACCGAGTTTGTG...TCTGGCTCTGATGGGTACCAGACACACAAATGGTACGCAGACATTCATGCAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR CCA 90 bp | ATGTGCATTTGTATGCTTGTACACATATCCACCATCCTTCTGCAGGATGAGACTGGGTCTGGAAATGCTTaGTGTGGCCTGGCGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MCICMLVHISTILLQDETGSGNA*CGLAWQ Trigger: CTGCCACGCCAGGCCACACCAAGCATTTCCAGACCC...AGTCTCATCCTGCAGAAGGATGGTGGATATGTGTACAAGCATACAAATGCACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR GCA 90 bp | CATGGGGTGATGCTTTCTGGAGTGTCCCATTCTGTAATTAGTGTGCGCTTGAATGGTCCCTGCAAGTTCTaGAGTTGCAAGAAAGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HGVMLSGVSHSVISVRLNGPCKF*SCKKVL Trigger: GAGGACTTTCTTGCAACTGCAGAACTTGCAGGGACC...ATTCAAGCGCACACTAATTACAGAATGGGACACTCCAGAAAGCATCACCCCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR CCA 90 bp | CTGCATGAATGTCTGCGTACCATTTGTGTGTCTGGTACCCATCAGAGCCAGAAGCAGACTCTGTTTTGTTaGTGTCTCCAGCAACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LHECLRTICVSGTHQSQKQTLFC*CLQQHC Trigger: ACAGTGTTGCTGGAGACACCAACAAAACAGAGTCTG...CTTCTGGCTCTGATGGGTACCAGACACACAAATGGTACGCAGACATTCATGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR CCA 90 bp | CATGGGGTGATGCTTTCTGGAGTGTCCCATTCTGTAATTAGTGTGCGCTTGAATCATTTTCGATCTGTTTaGCTTTTCGGCCTTTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: HGVMLSGVSHSVISVRLNHFRSV*LFGLCP Trigger: CGGGCAAAGGCCGAAAAGCCAAACAGATCGAAAATG...ATTCAAGCGCACACTAATTACAGAATGGGACACTCCAGAAAGCATCACCCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
||
| CDS-3UTR TCA 90 bp | ATGTGCATTTGTATGCTTGTACACATATCCACCATCCTTCTGCAGGATGAGACTTCCTCTTCGTCCTCCTaGCAGTCCTCATATTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MCICMLVHISTILLQDETSSSSS*QSSYLL Trigger: CAGCAAATATGAGGACTGTCAGGAGGACGAAGAGGA...AGTCTCATCCTGCAGAAGGATGGTGGATATGTGTACAAGCATACAAATGCACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
||
| CDS-3UTR GCA 90 bp | GCCTGCATGAATGTCTGCGTACCATTTGTGTGTCTGGTACCCATCAGAGCCAGAGAAGTTATCTTTCTCTaGTTGTTTCAGTTCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ACMNVCVPFVCLVPIRAREVIFL*LFQFFW Trigger: CCAGAAGAACTGAAACAAGCAGAGAAAGATAACTTC...TCTGGCTCTGATGGGTACCAGACACACAAATGGTACGCAGACATTCATGCAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
||
| CDS-3UTR GCA 90 bp | CATGGGGTGATGCTTTCTGGAGTGTCCCATTCTGTAATTAGTGTGCGCTTGAATAGCAGTCAGCAAGTCTaGCTTGTTTATCAGGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: HGVMLSGVSHSVISVRLNSSQQV*LVYQDH Trigger: GTGATCCTGATAAACAAGGCAGACTTGCTGACTGCT...ATTCAAGCGCACACTAATTACAGAATGGGACACTCCAGAAAGCATCACCCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR GCA 90 bp | ATGTGCATTTGTATGCTTGTACACATATCCACCATCCTTCTGCAGGATGAGACTGTCTGGCTGCCCATGTaGTGTCATGAATCCTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: MCICMLVHISTILLQDETVWLPM*CHESSH Trigger: ATGAGAGGATTCATGACAGCACATGGGCAGCCAGAC...AGTCTCATCCTGCAGAAGGATGGTGGATATGTGTACAAGCATACAAATGCACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR CCA 90 bp | TGGGTGTTTTGCCTGCATGAATGTCTGCGTACCATTTGTGTGTCTGGTACCCATAAATCATCTCTGCTTTaGTGGACACGAAAGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WVFCLHECLRTICVSGTHKSSLL*WTRKMA Trigger: TGCCATCTTTCGTGTCCACCAAAGCAGAGATGATTT...ATGGGTACCAGACACACAAATGGTACGCAGACATTCATGCAGGCAAAACACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR CCA 90 bp | CATGGGGTGATGCTTTCTGGAGTGTCCCATTCTGTAATTAGTGTGCGCTTGAATTTTCCAGGAGGAGGGTaGCAATACAGTAGTTTACCT | + |
|
Preference number: 4 (lower is better) Translates to: HGVMLSGVSHSVISVRLNFPGGG*QYSSLP Trigger: AGGTAAACTACTGTATTGCCACCCTCCTCCTGGAAA...ATTCAAGCGCACACTAATTACAGAATGGGACACTCCAGAAAGCATCACCCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTGTTTTGCCTGCATGAATGTCTGCGTACCATTTGTGTGTCTGGTACCCATTTTTCTGTCCCAATTTaGCCTCCTTGGTATACACAA | + |
|
Preference number: 4 (lower is better) Translates to: WVFCLHECLRTICVSGTHFSVPI*PPWYTQ Trigger: TTGTGTATACCAAGGAGGCCAAATTGGGACAGAAAA...ATGGGTACCAGACACACAAATGGTACGCAGACATTCATGCAGGCAAAACACCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
||
| CDS-3UTR TCA 90 bp | ATGTGCATTTGTATGCTTGTACACATATCCACCATCCTTCTGCAGGATGAGACTAGTCATAGCCATCATTaGGTTCACTTGTATGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: MCICMLVHISTILLQDETSHSHH*VHLYAA Trigger: GGCTGCATACAAGTGAACTCAATGATGGCTATGACT...AGTCTCATCCTGCAGAAGGATGGTGGATATGTGTACAAGCATACAAATGCACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
||
| CDS-3UTR TCA 90 bp | ATAACTTCCCAAAACCTCAAAGTCAATGTGCATTTGTATGCTTGTACACATATCTATCACTTCTCTCAATaGCCCTCCAGAGCTGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: ITSQNLKVNVHLYACTHIYHFSQ*PSRAGA Trigger: GGCGCCAGCTCTGGAGGGTCATTGAGAGAAGTGATA...GATATGTGTACAAGCATACAAATGCACATTGACTTTGAGGTTTTGGGAAGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
||
| CDS-3UTR TCA 90 bp | ATAACTTCCCAAAACCTCAAAGTCAATGTGCATTTGTATGCTTGTACACATATCCGTCAACAGTTCTTCTaGGGTTGGAGGTCGGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ITSQNLKVNVHLYACTHIRQQFF*GWRSVG Trigger: CCCTACCGACCTCCAACCTCAGAAGAACTGTTGACG...GATATGTGTACAAGCATACAAATGCACATTGACTTTGAGGTTTTGGGAAGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
||
| CDS-3UTR TCA 90 bp | ATAACTTCCCAAAACCTCAAAGTCAATGTGCATTTGTATGCTTGTACACATATCGATGGTGTTGATGGTTaGGCTCTTACCAACATTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ITSQNLKVNVHLYACTHIDGVDG*ALTNIR Trigger: CCTAATGTTGGTAAGAGCTCAACCATCAACACCATC...GATATGTGTACAAGCATACAAATGCACATTGACTTTGAGGTTTTGGGAAGTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR CCA 90 bp | ATAACTTCCCAAAACCTCAAAGTCAATGTGCATTTGTATGCTTGTACACATATCCCAATTTGGCCTCCTTaGTATACACAAGAACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ITSQNLKVNVHLYACTHIPIWPP*YTQELS Trigger: AGACAGTTCTTGTGTATACCAAGGAGGCCAAATTGG...GATATGTGTACAAGCATACAAATGCACATTGACTTTGAGGTTTTGGGAAGTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
||
| CDS-3UTR CAA 90 bp | GACAGCAGCAGTGGCGGTTTGAGCTCGTGTCCTCCCGCACAGCGCAGCTGCCTGCTTTCAGACTCTGTTTaGTTGGTGTCTCCAGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: DSSSGGLSSCPPAQRSCLLSDSV*LVSPAT Trigger: TGTTGCTGGAGACACCAACAAAACAGAGTCTGAAAG...CAGGCAGCTGCGCTGTGCGGGAGGACACGAGCTCAAACCGCCACTGCTGCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCGACTGTGCTCTCCAGGAGAGCAGGGTCCAGTCCACAGTGCAGTGGTCAGGTCAGCAAGTCTGCCTaGTTTATCAGGATCACGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GATVLSRRAGSSPQCSGQVSKSA*FIRITF Trigger: GAACGTGATCCTGATAAACAAGGCAGACTTGCTGAC...CTGACCACTGCACTGTGGACTGGACCCTGCTCTCCTGGAGAGCACAGTCGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS GCA 90 bp | TTCGGCCTTTGCCCGGCTGAAGTCTCAGTTCTCCACCTTTTACTTTaGTCTCTAGGAGCTGCTGGTGTTGGTGCTGGAACGCCACAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: FGLCPAEVSVLHLLL*SLGAAGVGAGTPQG Trigger: ACCCTGTGGCGTTCCAGCACCAACACCAGCAGCTCCTAGAGAGCAAAGTAAAAGGTGGAGAACTGAGACTTCAGCCGGGCAAAGGCCGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS GCA 90 bp | GTCTCTCATCTGGTCGATAGGGAGGATCCCATTGCAAATCATCTCTaGTTTGGTGGACACGAAAGATGGCATCACCAGGCCCGGGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: VSHLVDREDPIANHL*FGGHERWHHQARAV Trigger: GACTGCCCGGGCCTGGTGATGCCATCTTTCGTGTCCACCAAAGCAGAGATGATTTGCAATGGGATCCTCCCTATCGACCAGATGAGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CCA 90 bp | CTCAGTTCTCCACCTTTTACTTTGCTCTCTAGGAGCTGCTGGTGTTaGTGCTGGAACGCCACAGGGTCTTTTCCAGGAGGAGGGTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LSSPPFTLLSRSCWC*CWNATGSFPGGGWQ Trigger: TTGCCACCCTCCTCCTGGAAAAGACCCTGTGGCGTTCCAGCACCAACACCAGCAGCTCCTAGAGAGCAAAGTAAAAGGTGGAGAACTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS GCA 90 bp | AGTTCTCCACCTTTTACTTTGCTCTCTAGGAGCTGCTGGTGTTGGTaGTGGAACGCCACAGGGTCTTTTCCAGGAGGAGGGTGGCAATAC | + |
|
Preference number: 5 (lower is better) Translates to: SSPPFTLLSRSCWCW*WNATGSFPGGGWQY Trigger: GTATTGCCACCCTCCTCCTGGAAAAGACCCTGTGGCGTTCCAGCACCAACACCAGCAGCTCCTAGAGAGCAAAGTAAAAGGTGGAGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CCA 90 bp | TCTCCACCTTTTACTTTGCTCTCTAGGAGCTGCTGGTGTTGGTGCTaGAACGCCACAGGGTCTTTTCCAGGAGGAGGGTGGCAATACAGT | + |
|
Preference number: 5 (lower is better) Translates to: SPPFTLLSRSCWCWC*NATGSFPGGGWQYS Trigger: ACTGTATTGCCACCCTCCTCCTGGAAAAGACCCTGTGGCGTTCCAGCACCAACACCAGCAGCTCCTAGAGAGCAAAGTAAAAGGTGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS TCA 90 bp | CTGTCACAGACTGAAGATTCAGACGACCCCAGTCATAGCCATCATTaGGTTCACTTGTATGCAGCCAGGAGTCAGTATGACGGTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSQTEDSDDPSHSHH*VHLYAARSQYDGGC Trigger: GCAGCCACCGTCATACTGACTCCTGGCTGCATACAAGTGAACTCAATGATGGCTATGACTGGGGTCGTCTGAATCTTCAGTCTGTGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS TCA 90 bp | CTGTCTTCTTCTGAACACGTCTGCCAATCTTCCTCTTCGTCCTCCTaGCAGTCCTCATATTTGCTGTCACCACTGTCACTTGCGGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSSSEHVCQSSSSSS*QSSYLLSPLSLADS Trigger: GGAGTCCGCAAGTGACAGTGGTGACAGCAAATATGAGGACTGTCAGGAGGACGAAGAGGAAGATTGGCAGACGTGTTCAGAAGAAGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS GCA 90 bp | ACCTTTACCCCTTCCTTTTCAAAGTGCACAGCCCAGGCAAACCGCTaGTCAGCAGTCAGCAAGTCTGCCTTGTTTATCAGGATCACGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TFTPSFSKCTAQANR*SAVSKSALFIRITF Trigger: GAACGTGATCCTGATAAACAAGGCAGACTTGCTGACTGCTGAGCAGCGGTTTGCCTGGGCTGTGCACTTTGAAAAGGAAGGGGTAAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CCA 90 bp | ACTCGCCGTGGGATATTCTGGCAAACTAGTGATACGGGTGGAACGTaGTCTCTCATCTGGTCGATAGGGAGGATCCCATTGCAAATCATC | + |
|
Preference number: 5 (lower is better) Translates to: TRRGIFWQTSDTGGT*SLIWSIGRIPLQII Trigger: GATGATTTGCAATGGGATCCTCCCTATCGACCAGATGAGAGACCACGTTCCACCCGTATCACTAGTTTGCCAGAATATCCCACGGCGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS GCA 90 bp | GGGTACAAACTTAATATTCAGCTTCTCAGCCACAAACTCGGTCCCTaGAAGTTCTGCAGTTGCAAGAAAGTCCTCCAGGGAGCTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GYKLNIQLLSHKLGP*KFCSCKKVLQGALL Trigger: GAGCAGAGCTCCCTGGAGGACTTTCTTGCAACTGCAGAACTTGCAGGGACCGAGTTTGTGGCTGAGAAGCTGAATATTAAGTTTGTACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CCA 90 bp | ACGATCTGGACCACAATATCACTTCTCTCAATGACCCTCCAGAGCTaGCGCCAGAAGTCCAAGTTCCGTTCAAAGGGAGTCAATATCAAC | + |
|
Preference number: 5 (lower is better) Translates to: TIWTTISLLSMTLQS*RQKSKFRSKGVNIN Trigger: GTTGATATTGACTCCCTTTGAACGGAACTTGGACTTCTGGCGCCAGCTCTGGAGGGTCATTGAGAGAAGTGATATTGTGGTCCAGATCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CCA 90 bp | CAGCAGTCAGCAAGTCTGCCTTGTTTATCAGGATCACGTTCTCCTTaGCAGCATCGATCTCTTTCACGTAACACTCCAAATCCTCACATC | + |
|
Preference number: 5 (lower is better) Translates to: QQSASLPCLSGSRSP*QHRSLSRNTPNPHI Trigger: GATGTGAGGATTTGGAGTGTTACGTGAAAGAGATCGATGCTGCCAAGGAGAACGTGATCCTGATAAACAAGGCAGACTTGCTGACTGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS TCA 90 bp | TGTCATGAATCCTCTCATGCATCCATAAGCCGTCAACAGTTCTTCTaGGGTTGGAGGTCGGTAGGGGTCTTCATCTTCTCTAGGCTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: CHESSHASISRQQFF*GWRSVGVFIFSRLY Trigger: ATAAAGCCTAGAGAAGATGAAGACCCCTACCGACCTCCAACCTCAGAAGAACTGTTGACGGCTTATGGATGCATGAGAGGATTCATGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CCA 90 bp | ATGTTAATACCATATGTCACTTCCAAAACTCGCCGTGGGATATTCTaGCAAACTAGTGATACGGGTGGAACGTGGTCTCTCATCTGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: MLIPYVTSKTRRGIF*QTSDTGGTWSLIWS Trigger: CGACCAGATGAGAGACCACGTTCCACCCGTATCACTAGTTTGCCAGAATATCCCACGGCGAGTTTTGGAAGTGACATATGGTATTAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR CAA 90 bp | ATGTGCATTTGTATGCTTGTACACATATCCACCATCCTTCTGCAGGATGAGACTCTGCAAGTTCTGCAGTaGCAAGAAAGTCCTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: MCICMLVHISTILLQDETLQVLQ*QESPPG Trigger: CCCTGGAGGACTTTCTTGCAACTGCAGAACTTGCAG...AGTCTCATCCTGCAGAAGGATGGTGGATATGTGTACAAGCATACAAATGCACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR CAA 90 bp | CTGCATGAATGTCTGCGTACCATTTGTGTGTCTGGTACCCATCAGAGCCAGAAGTTTTTCTGTCCCAATTaGGCCTCCTTGGTATACACA | + |
|
Preference number: 5 (lower is better) Translates to: LHECLRTICVSGTHQSQKFFCPN*ASLVYT Trigger: TGTGTATACCAAGGAGGCCAAATTGGGACAGAAAAA...CTTCTGGCTCTGATGGGTACCAGACACACAAATGGTACGCAGACATTCATGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS-3UTR CAA 90 bp | CATGGGGTGATGCTTTCTGGAGTGTCCCATTCTGTAATTAGTGTGCGCTTGAATGACACCGATACTTTCTaGTTGCCCATGATGGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HGVMLSGVSHSVISVRLNDTDTF*LPMMVL Trigger: CAACACCATCATGGGCAACAAGAAAGTATCGGTGTC...ATTCAAGCGCACACTAATTACAGAATGGGACACTCCAGAAAGCATCACCCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS TCA 90 bp | TCTCCAGCAACACTGTCTACTTCCTCCTTCAAGTCACCATTTAGGTaGTCAGTTTCTGCCAAAGCTGACCAGAAGATAACCTTTACCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPATLSTSSFKSPFR*SVSAKADQKITFTP Trigger: AGGGGTAAAGGTTATCTTCTGGTCAGCTTTGGCAGAAACTGATCACCTAAATGGTGACTTGAAGGAGGAAGTAGACAGTGTTGCTGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
||
| CDS CCA 90 bp | CAATTTGGCCTCCTTGGTATACACAAGAACTGTCTGTTTTCTTCGTaGAGTTTCTTAATTCTCTGGCTCTCCTCAAAAGACAGCAGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: QFGLLGIHKNCLFSS*SFLILWLSSKDSSP Trigger: CGGACTGCTGTCTTTTGAGGAGAGCCAGAGAATTAAGAAACTCCACGAAGAAAACAGACAGTTCTTGTGTATACCAAGGAGGCCAAATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
||
| CDS CCA 90 bp | ACCAGCCCAACAGTTAGCTGTCCATCTTTCACTTTCTTTCCAGTGTaGAGTTTCTTAAAGAGTTCCAGTAATTCCTGTTTCGACACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TSPTVSCPSFTFFPV*SFLKSSSNSCFDTR Trigger: CCTGGTGTCGAAACAGGAATTACTGGAACTCTTTAAGAAACTCCACACTGGAAAGAAAGTGAAAGATGGACAGCTAACTGTTGGGCTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
||
| CDS-3UTR CAA 90 bp | ATAACTTCCCAAAACCTCAAAGTCAATGTGCATTTGTATGCTTGTACACATATCCCCAATTTGGCCTCCTaGGTATACACAAGAACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ITSQNLKVNVHLYACTHIPNLAS*VYTRTV Trigger: GACAGTTCTTGTGTATACCAAGGAGGCCAAATTGGG...GATATGTGTACAAGCATACAAATGCACATTGACTTTGAGGTTTTGGGAAGTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
||
| CDS-3UTR CAA 90 bp | ATAACTTCCCAAAACCTCAAAGTCAATGTGCATTTGTATGCTTGTACACATATCTCAGACTCTGTTTTGTaGGTGTCTCCAGCAACACTG | + |
|
Preference number: 5 (lower is better) Translates to: ITSQNLKVNVHLYACTHISDSVL*VSPATL Trigger: CAGTGTTGCTGGAGACACCAACAAAACAGAGTCTGA...GATATGTGTACAAGCATACAAATGCACATTGACTTTGAGGTTTTGGGAAGTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
||
| CDS-3UTR CAA 90 bp | ATAACTTCCCAAAACCTCAAAGTCAATGTGCATTTGTATGCTTGTACACATATCTTGCCCATGATGGTGTaGATGGTTGAGCTCTTACCA | + |
|
Preference number: 5 (lower is better) Translates to: ITSQNLKVNVHLYACTHILPMMV*MVELLP Trigger: TGGTAAGAGCTCAACCATCAACACCATCATGGGCAA...GATATGTGTACAAGCATACAAATGCACATTGACTTTGAGGTTTTGGGAAGTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
||
| CDS-3UTR CAA 90 bp | ATAACTTCCCAAAACCTCAAAGTCAATGTGCATTTGTATGCTTGTACACATATCACCGATACTTTCTTGTaGCCCATGATGGTGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: ITSQNLKVNVHLYACTHITDTFL*PMMVLM Trigger: CATCAACACCATCATGGGCAACAAGAAAGTATCGGT...GATATGTGTACAAGCATACAAATGCACATTGACTTTGAGGTTTTGGGAAGTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
||
| CDS CCA 72 bp | TCACACAGGCAGAGGCCAGGCTCCACGTACAGGGTCTaGAAATGCTTGGTGTGGCCTGGCGTGGCAGACACC | + |
|
Preference number: 6 (lower is better) Translates to: SHRQRPGSTYRV*KCLVWPGVADT Trigger: GGTGTCTGCCACGCCAGGCCACACCAAGCATTTCCAGACCCTGTACGTGGAGCCTGGCCTCTGCCTGTGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
||
| CDS CCA 72 bp | CCAGGCTCCACGTACAGGGTCTGGAAATGCTTGGTGTaGCCTGGCGTGGCAGACACCGATACTTTCTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PGSTYRVWKCLV*PGVADTDTFLL Trigger: CAACAAGAAAGTATCGGTGTCTGCCACGCCAGGCCACACCAAGCATTTCCAGACCCTGTACGTGGAGCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
||
| CDS GCA 72 bp | CCTTTTACTTTGCTCTCTAGGAGCTGCTGGTGTTGGTaGTGGAACGCCACAGGGTCTTTTCCAGGAGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: PFTLLSRSCWCW*WNATGSFPGGG Trigger: CCCTCCTCCTGGAAAAGACCCTGTGGCGTTCCAGCACCAACACCAGCAGCTCCTAGAGAGCAAAGTAAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CCA 72 bp | CTCCACGTACAGGGTCTGGAAATGCTTGGTGTGGCCTaGCGTGGCAGACACCGATACTTTCTTGTTGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: LHVQGLEMLGVA*RGRHRYFLVAH Trigger: ATGGGCAACAAGAAAGTATCGGTGTCTGCCACGCCAGGCCACACCAAGCATTTCCAGACCCTGTACGTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CCA 72 bp | TTTACTTTGCTCTCTAGGAGCTGCTGGTGTTGGTGCTaGAACGCCACAGGGTCTTTTCCAGGAGGAGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: FTLLSRSCWCWC*NATGSFPGGGW Trigger: CCACCCTCCTCCTGGAAAAGACCCTGTGGCGTTCCAGCACCAACACCAGCAGCTCCTAGAGAGCAAAGTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CAA 90 bp | CTCATCTGGTCGATAGGGAGGATCCCATTGCAAATCATCTCTGCTTaGGTGGACACGAAAGATGGCATCACCAGGCCCGGGCAGTCACAC | + |
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Preference number: 6 (lower is better) Translates to: LIWSIGRIPLQIISA*VDTKDGITRPGQSH Trigger: GTGTGACTGCCCGGGCCTGGTGATGCCATCTTTCGTGTCCACCAAAGCAGAGATGATTTGCAATGGGATCCTCCCTATCGACCAGATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CCA 72 bp | CCACCTTTTACTTTGCTCTCTAGGAGCTGCTGGTGTTaGTGCTGGAACGCCACAGGGTCTTTTCCAGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: PPFTLLSRSCWC*CWNATGSFPGG Trigger: TCCTCCTGGAAAAGACCCTGTGGCGTTCCAGCACCAACACCAGCAGCTCCTAGAGAGCAAAGTAAAAGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CAA 72 bp | CAGGCAAACCGCTGCTCAGCAGTCAGCAAGTCTGCCTaGTTTATCAGGATCACGTTCTCCTTGGCAGCATCG | + |
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Preference number: 6 (lower is better) Translates to: QANRCSAVSKSA*FIRITFSLAAS Trigger: CGATGCTGCCAAGGAGAACGTGATCCTGATAAACAAGGCAGACTTGCTGACTGCTGAGCAGCGGTTTGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CAA 72 bp | TCGATAGGGAGGATCCCATTGCAAATCATCTCTGCTTaGGTGGACACGAAAGATGGCATCACCAGGCCCGGG | + |
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Preference number: 6 (lower is better) Translates to: SIGRIPLQIISA*VDTKDGITRPG Trigger: CCCGGGCCTGGTGATGCCATCTTTCGTGTCCACCAAAGCAGAGATGATTTGCAATGGGATCCTCCCTATCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CAA 90 bp | TGCACAGCCCAGGCAAACCGCTGCTCAGCAGTCAGCAAGTCTGCCTaGTTTATCAGGATCACGTTCTCCTTGGCAGCATCGATCTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: CTAQANRCSAVSKSA*FIRITFSLAASISF Trigger: GAAAGAGATCGATGCTGCCAAGGAGAACGTGATCCTGATAAACAAGGCAGACTTGCTGACTGCTGAGCAGCGGTTTGCCTGGGCTGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS TCA 72 bp | CAGATCGAGGCTGGTCTGGCTGCCCATGTGCTGTCATaGATCCTCTCATGCATCCATAAGCCGTCAACAGTT | + |
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Preference number: 6 (lower is better) Translates to: QIEAGLAAHVLS*ILSCIHKPSTV Trigger: AACTGTTGACGGCTTATGGATGCATGAGAGGATTCATGACAGCACATGGGCAGCCAGACCAGCCTCGATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS GCA 72 bp | CCTTCCTTTTCAAAGTGCACAGCCCAGGCAAACCGCTaGTCAGCAGTCAGCAAGTCTGCCTTGTTTATCAGG | + |
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Preference number: 6 (lower is better) Translates to: PSFSKCTAQANR*SAVSKSALFIR Trigger: CCTGATAAACAAGGCAGACTTGCTGACTGCTGAGCAGCGGTTTGCCTGGGCTGTGCACTTTGAAAAGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS GCA 72 bp | CTGGTCGATAGGGAGGATCCCATTGCAAATCATCTCTaGTTTGGTGGACACGAAAGATGGCATCACCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: LVDREDPIANHL*FGGHERWHHQA Trigger: GGCCTGGTGATGCCATCTTTCGTGTCCACCAAAGCAGAGATGATTTGCAATGGGATCCTCCCTATCGACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CAA 72 bp | GTGTGGCCTGGCGTGGCAGACACCGATACTTTCTTGTaGCCCATGATGGTGTTGATGGTTGAGCTCTTACCA | + |
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Preference number: 6 (lower is better) Translates to: VWPGVADTDTFL*PMMVLMVELLP Trigger: TGGTAAGAGCTCAACCATCAACACCATCATGGGCAACAAGAAAGTATCGGTGTCTGCCACGCCAGGCCACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CAA 90 bp | ACGGGTGGAACGTGGTCTCTCATCTGGTCGATAGGGAGGATCCCATaGCAAATCATCTCTGCTTTGGTGGACACGAAAGATGGCATCACC | + |
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Preference number: 6 (lower is better) Translates to: TGGTWSLIWSIGRIP*QIISALVDTKDGIT Trigger: GGTGATGCCATCTTTCGTGTCCACCAAAGCAGAGATGATTTGCAATGGGATCCTCCCTATCGACCAGATGAGAGACCACGTTCCACCCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS GCA 72 bp | CTCAGTTCTCCACCTTTTACTTTGCTCTCTAGGAGCTaGTGGTGTTGGTGCTGGAACGCCACAGGGTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: LSSPPFTLLSRS*WCWCWNATGSF Trigger: AAAAGACCCTGTGGCGTTCCAGCACCAACACCAGCAGCTCCTAGAGAGCAAAGTAAAAGGTGGAGAACTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CCA 72 bp | ACCACAATATCACTTCTCTCAATGACCCTCCAGAGCTaGCGCCAGAAGTCCAAGTTCCGTTCAAAGGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: TTISLLSMTLQS*RQKSKFRSKGV Trigger: GACTCCCTTTGAACGGAACTTGGACTTCTGGCGCCAGCTCTGGAGGGTCATTGAGAGAAGTGATATTGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CCA 72 bp | GGGATATTCTGGCAAACTAGTGATACGGGTGGAACGTaGTCTCTCATCTGGTCGATAGGGAGGATCCCATTG | + |
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Preference number: 6 (lower is better) Translates to: GIFWQTSDTGGT*SLIWSIGRIPL Trigger: CAATGGGATCCTCCCTATCGACCAGATGAGAGACCACGTTCCACCCGTATCACTAGTTTGCCAGAATATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CCA 72 bp | AGTTCTCCACCTTTTACTTTGCTCTCTAGGAGCTGCTaGTGTTGGTGCTGGAACGCCACAGGGTCTTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: SSPPFTLLSRSC*CWCWNATGSFP Trigger: TGGAAAAGACCCTGTGGCGTTCCAGCACCAACACCAGCAGCTCCTAGAGAGCAAAGTAAAAGGTGGAGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CAA 72 bp | TTGGTGTGGCCTGGCGTGGCAGACACCGATACTTTCTaGTTGCCCATGATGGTGTTGATGGTTGAGCTCTTA | + |
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Preference number: 6 (lower is better) Translates to: LVWPGVADTDTF*LPMMVLMVELL Trigger: TAAGAGCTCAACCATCAACACCATCATGGGCAACAAGAAAGTATCGGTGTCTGCCACGCCAGGCCACACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CAA 90 bp | AAATGCTTGGTGTGGCCTGGCGTGGCAGACACCGATACTTTCTTGTaGCCCATGATGGTGTTGATGGTTGAGCTCTTACCAACATTAGGG | + |
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Preference number: 6 (lower is better) Translates to: KCLVWPGVADTDTFL*PMMVLMVELLPTLG Trigger: CCCTAATGTTGGTAAGAGCTCAACCATCAACACCATCATGGGCAACAAGAAAGTATCGGTGTCTGCCACGCCAGGCCACACCAAGCATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS TCA 72 bp | TCCTCTCATGCATCCATAAGCCGTCAACAGTTCTTCTaGGGTTGGAGGTCGGTAGGGGTCTTCATCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SSHASISRQQFF*GWRSVGVFIFS Trigger: AGAGAAGATGAAGACCCCTACCGACCTCCAACCTCAGAAGAACTGTTGACGGCTTATGGATGCATGAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CAA 90 bp | TGGAAATGCTTGGTGTGGCCTGGCGTGGCAGACACCGATACTTTCTaGTTGCCCATGATGGTGTTGATGGTTGAGCTCTTACCAACATTA | + |
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Preference number: 6 (lower is better) Translates to: WKCLVWPGVADTDTF*LPMMVLMVELLPTL Trigger: TAATGTTGGTAAGAGCTCAACCATCAACACCATCATGGGCAACAAGAAAGTATCGGTGTCTGCCACGCCAGGCCACACCAAGCATTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS TCA 72 bp | TCTGAACACGTCTGCCAATCTTCCTCTTCGTCCTCCTaGCAGTCCTCATATTTGCTGTCACCACTGTCACTT | + |
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Preference number: 6 (lower is better) Translates to: SEHVCQSSSSSS*QSSYLLSPLSL Trigger: AAGTGACAGTGGTGACAGCAAATATGAGGACTGTCAGGAGGACGAAGAGGAAGATTGGCAGACGTGTTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CCA 72 bp | CATCTAAACAGGAGCGGGTTTCGAGCATCTACGATCTaGACCACAATATCACTTCTCTCAATGACCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: HLNRSGFRASTI*TTISLLSMTLQ Trigger: CTGGAGGGTCATTGAGAGAAGTGATATTGTGGTCCAGATCGTAGATGCTCGAAACCCGCTCCTGTTTAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CCA 72 bp | TGCGGACTCCTCACTAAGCGAGATCAAGTCTCTGTGTaGGATTTCATTCGCATCCAAACTGGAGCTTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: CGLLTKRDQVSV*DFIRIQTGAFR Trigger: TCTGAAAGCTCCAGTTTGGATGCGAATGAAATCCCACACAGAGACTTGATCTCGCTTAGTGAGGAGTCCGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CAA 72 bp | ACGTGGTCTCTCATCTGGTCGATAGGGAGGATCCCATaGCAAATCATCTCTGCTTTGGTGGACACGAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: TWSLIWSIGRIP*QIISALVDTKD Trigger: ATCTTTCGTGTCCACCAAAGCAGAGATGATTTGCAATGGGATCCTCCCTATCGACCAGATGAGAGACCACGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CAA 90 bp | CCGCACAAGCTGGCGCCTCCATTTCAGGAAGTTATCTTTCTCTGCTaGTTTCAGTTCTTCTGGGCTAGTTTTTCTGTCCCAATTTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: PHKLAPPFQEVIFLC*FQFFWASFSVPIWP Trigger: AGGCCAAATTGGGACAGAAAAACTAGCCCAGAAGAACTGAAACAAGCAGAGAAAGATAACTTCCTGAAATGGAGGCGCCAGCTTGTGCGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CAA 90 bp | GGGATTTCATTCGCATCCAAACTGGAGCTTTCAGACTCTGTTTTGTaGGTGTCTCCAGCAACACTGTCTACTTCCTCCTTCAAGTCACCA | + |
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Preference number: 6 (lower is better) Translates to: GISFASKLELSDSVL*VSPATLSTSSFKSP Trigger: TGGTGACTTGAAGGAGGAAGTAGACAGTGTTGCTGGAGACACCAACAAAACAGAGTCTGAAAGCTCCAGTTTGGATGCGAATGAAATCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS TCA 72 bp | ACTGAAGATTCAGACGACCCCAGTCATAGCCATCATTaGGTTCACTTGTATGCAGCCAGGAGTCAGTATGAC | + |
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Preference number: 6 (lower is better) Translates to: TEDSDDPSHSHH*VHLYAARSQYD Trigger: GTCATACTGACTCCTGGCTGCATACAAGTGAACTCAATGATGGCTATGACTGGGGTCGTCTGAATCTTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CCA 72 bp | TCGCATCCAAACTGGAGCTTTCAGACTCTGTTTTGTTaGTGTCTCCAGCAACACTGTCTACTTCCTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SHPNWSFQTLFC*CLQQHCLLPPS Trigger: TGAAGGAGGAAGTAGACAGTGTTGCTGGAGACACCAACAAAACAGAGTCTGAAAGCTCCAGTTTGGATGCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CAA 72 bp | TTCGCATCCAAACTGGAGCTTTCAGACTCTGTTTTGTaGGTGTCTCCAGCAACACTGTCTACTTCCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: FASKLELSDSVL*VSPATLSTSSF Trigger: GAAGGAGGAAGTAGACAGTGTTGCTGGAGACACCAACAAAACAGAGTCTGAAAGCTCCAGTTTGGATGCGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CCA 72 bp | GCAAGTCTGCCTTGTTTATCAGGATCACGTTCTCCTTaGCAGCATCGATCTCTTTCACGTAACACTCCAAAT | + |
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Preference number: 6 (lower is better) Translates to: ASLPCLSGSRSP*QHRSLSRNTPN Trigger: ATTTGGAGTGTTACGTGAAAGAGATCGATGCTGCCAAGGAGAACGTGATCCTGATAAACAAGGCAGACTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS TCA 72 bp | ACACTGTCTACTTCCTCCTTCAAGTCACCATTTAGGTaGTCAGTTTCTGCCAAAGCTGACCAGAAGATAACC | + |
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Preference number: 6 (lower is better) Translates to: TLSTSSFKSPFR*SVSAKADQKIT Trigger: GGTTATCTTCTGGTCAGCTTTGGCAGAAACTGATCACCTAAATGGTGACTTGAAGGAGGAAGTAGACAGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CCA 72 bp | TTCTGGGCTAGTTTTTCTGTCCCAATTTGGCCTCCTTaGTATACACAAGAACTGTCTGTTTTCTTCGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: FWASFSVPIWPP*YTQELSVFFVE Trigger: CTCCACGAAGAAAACAGACAGTTCTTGTGTATACCAAGGAGGCCAAATTGGGACAGAAAAACTAGCCCAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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| CDS CCA 72 bp | CTCCTTGGTATACACAAGAACTGTCTGTTTTCTTCGTaGAGTTTCTTAATTCTCTGGCTCTCCTCAAAAGAC | + |
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Preference number: 6 (lower is better) Translates to: LLGIHKNCLFSS*SFLILWLSSKD Trigger: GTCTTTTGAGGAGAGCCAGAGAATTAAGAAACTCCACGAAGAAAACAGACAGTTCTTGTGTATACCAAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117363.9 |
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