RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LSAMP (Mus musculus)

Ensembl gene IDs: ENSMUSG00000061080

Ensembl transcript IDs: ENSMUST00000078873.11, ENSMUST00000099761.10, ENSMUST00000133853.3, ENSMUST00000145951.8, ENSMUST00000187695.7

Found 347 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACGAGCACCATCCAAAAAGCTGTGCCTAGGAAGGATCGATGGGACTaGGGAGGTGTTGGGTGGGCGGGTCTCTCTCCCCTTACAGAGTGT +
Preference number: 1 (lower is better)
Translates to: TSTIQKAVPRKDRWD*GGVGWAGLSPLTEC
Trigger: ACACTCTGTAAGGGGAGAGAGACCCGCCCACCCAACACCTCCCCAGTCCCATCGATCCTTCCTAGGCACAGCTTTTTGGATGGTGCTCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR GCA 90 bp CCAGGCCCAGGAGTCCCTGCTATCCTAGTCCTCTTTCTTTCCGTTTaGCTAGGGTTGGTTGGGTCAGGCTGGAGAATCTCCACTGAGGGA +
Preference number: 1 (lower is better)
Translates to: PGPGVPAILVLFLSV*LGLVGSGWRISTEG
Trigger: TCCCTCAGTGGAGATTCTCCAGCCTGACCCAACCAACCCTAGGCAAACGGAAAGAAAGAGGACTAGGATAGCAGGGACTCCTGGGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR CCA 90 bp TTGAAGATTAGTGAAGGGACAAAGCAGGTCTGCTTAGGGTCACCTTaGGCTCCTCTTCCCTTGGTGGGGGAGGGGCCACCATTCAGATAC +
Preference number: 1 (lower is better)
Translates to: LKISEGTKQVCLGSP*APLPLVGEGPPFRY
Trigger: GTATCTGAATGGTGGCCCCTCCCCCACCAAGGGAAGAGGAGCCCAAGGTGACCCTAAGCAGACCTGCTTTGTCCCTTCACTAATCTTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR TCA 90 bp TTCCGTTTGCCTAGGGTTGGTTGGGTCAGGCTGGAGAATCTCCACTaGGGGAGAAGGAGCAAAGAAAGCCAGCTGACCTTGGCTAGAAGA +
Preference number: 1 (lower is better)
Translates to: FRLPRVGWVRLENLH*GRRSKESQLTLARR
Trigger: TCTTCTAGCCAAGGTCAGCTGGCTTTCTTTGCTCCTTCTCCCTCAGTGGAGATTCTCCAGCCTGACCCAACCAACCCTAGGCAAACGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR CCA 90 bp CAGAGAGGCAGCCTTCCTGTAAGATGTCCCCTAGGCCAACTCTGTTaGCGATGTGATGATGTCGGGCTTTGGAATGCTCATACTGCTGCT +
Preference number: 1 (lower is better)
Translates to: QRGSLPVRCPLGQLC*RCDDVGLWNAHTAA
Trigger: AGCAGCAGTATGAGCATTCCAAAGCCCGACATCATCACATCGCCAACAGAGTTGGCCTAGGGGACATCTTACAGGAAGGCTGCCTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR TCA 90 bp GGCTGGAGAATCTCCACTGAGGGAGAAGGAGCAAAGAAAGCCAGCTaGCCTTGGCTAGAAGAGCGTCTAAGTGTTCTGAGTGTCTGCTTC +
Preference number: 1 (lower is better)
Translates to: GWRISTEGEGAKKAS*PWLEERLSVLSVCF
Trigger: GAAGCAGACACTCAGAACACTTAGACGCTCTTCTAGCCAAGGTCAGCTGGCTTTCTTTGCTCCTTCTCCCTCAGTGGAGATTCTCCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR CCA 90 bp GACGGGTGGCGAGGGTTGCTGTGGTACGCCAGGAAGCTAGCTCCGTaGATTTTCTTCAATTGCAAGAAGCAGATTTTTACCGTGCCTAGA +
Preference number: 1 (lower is better)
Translates to: DGWRGLLWYARKLAP*IFFNCKKQIFTVPR
Trigger: TCTAGGCACGGTAAAAATCTGCTTCTTGCAATTGAAGAAAATCCACGGAGCTAGCTTCCTGGCGTACCACAGCAACCCTCGCCACCCGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR CCA 90 bp TACAGTGCAGGACAGTATCTACAGCACAATGGGTCTATGTACACATaGACCATTCCCCTGGCATGCTTTAGAGAAAGACACATACACGCT +
Preference number: 1 (lower is better)
Translates to: YSAGQYLQHNGSMYT*TIPLACFRERHIHA
Trigger: AGCGTGTATGTGTCTTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCTGTAGATACTGTCCTGCACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CCA 90 bp CCTTGGCTAGAAGAGCGTCTAAGTGTTCTGAGTGTCTGCTTCCTTTaGCTAAGGCAACACATTTGTAACCATGTCAGGCTTGCTTCTAAG +
Preference number: 1 (lower is better)
Translates to: PWLEERLSVLSVCFL*LRQHICNHVRLASK
Trigger: CTTAGAAGCAAGCCTGACATGGTTACAAATGTGTTGCCTTAGCCAAAGGAAGCAGACACTCAGAACACTTAGACGCTCTTCTAGCCAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR TCA 90 bp GCCAATAAAAGATGTCACATGGTAGTCATCTCAGAGAGGACCCTGTaGCTGTGGGCTGAGAAGAAAGGACTTAAAAAGCAGTTTCACGCT +
Preference number: 1 (lower is better)
Translates to: ANKRCHMVVISERTL*LWAEKKGLKKQFHA
Trigger: AGCGTGAAACTGCTTTTTAAGTCCTTTCTTCTCAGCCCACAGTCACAGGGTCCTCTCTGAGATGACTACCATGTGACATCTTTTATTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR GCA 90 bp ATCCCTTCTCTGCCAACTTTCAGGGTCTTCTCTGATCTTCAGAAATaGTCCCTTTCCTACGATTCTACCTCTGCTGCAAATGGTGAATCA +
Preference number: 1 (lower is better)
Translates to: IPSLPTFRVFSDLQK*SLSYDSTSAANGES
Trigger: TGATTCACCATTTGCAGCAGAGGTAGAATCGTAGGAAAGGGAGCATTTCTGAAGATCAGAGAAGACCCTGAAAGTTGGCAGAGAAGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
3UTR TCA 90 bp GTATTACTAGCTACCCTCTTGGATAGGAATCCCCATCCTATCTCTTaGTCATCCATAAATACTTTTCTGCATCCTGAACCCTGTCTGTCC +
Preference number: 1 (lower is better)
Translates to: VLLATLLDRNPHPIS*SSINTFLHPEPCLS
Trigger: GGACAGACAGGGTTCAGGATGCAGAAAAGTATTTATGGATGATCAAGAGATAGGATGGGGATTCCTATCCAAGAGGGTAGCTAGTAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR CCA 90 bp ACTTTGTATGCAAAGGATATGGAATCCGTGAGTGTTCCTGGTTTATaGATGCAACCCCTTCACTCCATGCTACCTATTTGTTCCAATCAC +
Preference number: 1 (lower is better)
Translates to: TLYAKDMESVSVPGL*MQPLHSMLPICSNH
Trigger: GTGATTGGAACAAATAGGTAGCATGGAGTGAAGGGGTTGCATCCATAAACCAGGAACACTCACGGATTCCATATCCTTTGCATACAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR GCA 90 bp CTCAGCAATAACCCTTCATCCTTTCTCAAGGTGAATCACTTTGGATaGTTCTATACAGTTTTAAGGGAAAGTAGCCACTGGTTTTCTAGC +
Preference number: 1 (lower is better)
Translates to: LSNNPSSFLKVNHFG*FYTVLRESSHWFSS
Trigger: GCTAGAAAACCAGTGGCTACTTTCCCTTAAAACTGTATAGAAGCATCCAAAGTGATTCACCTTGAGAAAGGATGAAGGGTTATTGCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CCA 90 bp TTACATTTCCCAATATTACGAACAAGGCAGCCACCTCAGCTATTTTaGTGCCCTCGCTTTAATATGAAAATGCCTTTCCTCTGTATCTCT +
Preference number: 1 (lower is better)
Translates to: LHFPILRTRQPPQLF*CPRFNMKMPFLCIS
Trigger: AGAGATACAGAGGAAAGGCATTTTCATATTAAAGCGAGGGCACCAAAATAGCTGAGGTGGCTGCCTTGTTCGTAATATTGGGAAATGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR TCA 90 bp GAACAAGGCAGCCACCTCAGCTATTTTGGTGCCCTCGCTTTAATATaGAAATGCCTTTCCTCTGTATCTCTAAGAAATTTTCTCAGAAAA +
Preference number: 1 (lower is better)
Translates to: EQGSHLSYFGALALI*KCLSSVSLRNFLRK
Trigger: TTTTCTGAGAAAATTTCTTAGAGATACAGAGGAAAGGCATTTTCATATTAAAGCGAGGGCACCAAAATAGCTGAGGTGGCTGCCTTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR TCA 90 bp TTTAAAAATAAGTTTTCTACAATATCCATAAACATTCCACTGGCGTaGATGCTAAATCTAAACCTAAGCTTAACGCCAGCCACCTCACCA +
Preference number: 1 (lower is better)
Translates to: FKNKFSTISINIPLA*MLNLNLSLTPATSP
Trigger: TGGTGAGGTGGCTGGCGTTAAGCTTAGGTTTAGATTTAGCATTCACGCCAGTGGAATGTTTATGGATATTGTAGAAAACTTATTTTTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR CCA 90 bp ACAGAAGACTCGGGTCTATTTTATGTCTCATTCACAATATTTTATTaGACCAACAATCTCCAATTAAGGGCATTATGGAGCAAATGCAGT +
Preference number: 1 (lower is better)
Translates to: TEDSGLFYVSFTIFY*TNNLQLRALWSKCS
Trigger: ACTGCATTTGCTCCATAATGCCCTTAATTGGAGATTGTTGGTCCAATAAAATATTGTGAATGAGACATAAAATAGACCCGAGTCTTCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CCA 90 bp CTACTTTTTAAACTGAAAGCTGAGGCTAAAGTTTTGTCTTATGAATaGCATAACTTTCACTTTGTATGCAAAGGATATGGAATCCGTGAG +
Preference number: 1 (lower is better)
Translates to: LLFKLKAEAKVLSYE*HNFHFVCKGYGIRE
Trigger: CTCACGGATTCCATATCCTTTGCATACAAAGTGAAAGTTATGCCATTCATAAGACAAAACTTTAGCCTCAGCTTTCAGTTTAAAAAGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR-3UTR GCA 90 bp GACAAAGCAGGTCTGCTTAGGGTCACCTTGGGCTCCTCTTCCCTTGGTGGGGGAAAGGGGGAGGAATTCTaGTCCTGGCCTCCCACCCAG +
Preference number: 2 (lower is better)
Translates to: DKAGLLRVTLGSSSLGGGKGEEF*SWPPTQ
Trigger: CTGGGTGGGAGGCCAGGAGCAGAATTCCTCCCCCTT...TCCCCCACCAAGGGAAGAGGAGCCCAAGGTGACCCTAAGCAGACCTGCTTTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CAA 90 bp GGGACAAAGCAGGTCTGCTTAGGGTCACCTTGGGCTCCTCTTCCCTaGGTGGGGGAGGGGCCACCATTCAGATACCCACTTGTCTCTGGA +
Preference number: 2 (lower is better)
Translates to: GTKQVCLGSPWAPLP*VGEGPPFRYPLVSG
Trigger: TCCAGAGACAAGTGGGTATCTGAATGGTGGCCCCTCCCCCACCAAGGGAAGAGGAGCCCAAGGTGACCCTAAGCAGACCTGCTTTGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR CCA 90 bp AGTGAAGGGACAAAGCAGGTCTGCTTAGGGTCACCTTGGGCTCCTCTTCCCTTGCGTGTTCTGGGTTGCTaGGGCAAAAGGGAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: SEGTKQVCLGSPWAPLPLRVLGC*GKREVG
Trigger: CCCCACCTCCCTTTTGCCCCAGCAACCCAGAACACG...CAAGGGAAGAGGAGCCCAAGGTGACCCTAAGCAGACCTGCTTTGTCCCTTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR CCA 90 bp AGTGAAGGGACAAAGCAGGTCTGCTTAGGGTCACCTTGGGCTCCTCTTCCCTTGAGACCAGGAGGGGTATaGGGTCCTGCCCTCGAAAGG +
Preference number: 2 (lower is better)
Translates to: SEGTKQVCLGSPWAPLPLRPGGV*GPALER
Trigger: CCTTTCGAGGGCAGGACCCCATACCCCTCCTGGTCT...CAAGGGAAGAGGAGCCCAAGGTGACCCTAAGCAGACCTGCTTTGTCCCTTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR GCA 90 bp TGCCCCAGTGGCCTGGCTTGGGGTATTGACTGGCCTCTATGGGCAATGGTGCCAGTACTTCCTAAAGTTTaGGGCGTGACTCGTGTTCTG +
Preference number: 2 (lower is better)
Translates to: CPSGLAWGIDWPLWAMVPVLPKV*GVTRVL
Trigger: CAGAACACGAGTCACGCCGCAAACTTTAGGAAGTAC...TGGCACCATTGCCCATAGAGGCCAGTCAATACCCCAAGCCAGGCCACTGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR GCA 90 bp GGGCTCCTCTTCCCTTGGTGGGGGAGGGGCCACCATTCAGATACCCACTTGTCTTGGATTCTCCAGGCTTaGACACTGAGAGTGAAATCA +
Preference number: 2 (lower is better)
Translates to: GLLFPWWGRGHHSDTHLSWILQA*TLRVKS
Trigger: TGATTTCACTCTCAGTGTGCAAGCCTGGAGAATCCA...AGACAAGTGGGTATCTGAATGGTGGCCCCTCCCCCACCAAGGGAAGAGGAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR CCA 90 bp TCTCAGAAAAGAGATACAGAACTGGTCCAGAGCCCCTGTGGTTCTAGAAGGTGCCTCCTCTTCCCTTGGTaGGGGAGGGGCCACCATTCA +
Preference number: 2 (lower is better)
Translates to: SQKRDTELVQSPCGSRRCLLFPW*GRGHHS
Trigger: TGAATGGTGGCCCCTCCCCCACCAAGGGAAGAGGAG...GCACCTTCTAGAACCACAGGGGCTCTGGACCAGTTCTGTATCTCTTTTCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR-3UTR GCA 90 bp CAAGAAACCAGTAACCCAGGCCCAGGAGTCCCTGCTATCCTAGTCCTCTTTCTTGGGACAAAGCAGGTCTaGTTAGGGTCACCTTGGGCT +
Preference number: 2 (lower is better)
Translates to: QETSNPGPGVPAILVLFLGTKQV*LGSPWA
Trigger: AGCCCAAGGTGACCCTAAGCAGACCTGCTTTGTCCC...AAGAAAGAGGACTAGGATAGCAGGGACTCCTGGGCCTGGGTTACTGGTTTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR-3UTR TCA 90 bp GACAAAGCAGGTCTGCTTAGGGTCACCTTGGGCTCCTCTTCCCTTGGTGGGGGACTTTTTCCCCACAGATaGAAATGGATGAAGGAAGGA +
Preference number: 2 (lower is better)
Translates to: DKAGLLRVTLGSSSLGGGLFPHR*KWMKEG
Trigger: TCCTTCCTTCATCCATTTTCATCTGTGGGGAAAAAG...TCCCCCACCAAGGGAAGAGGAGCCCAAGGTGACCCTAAGCAGACCTGCTTTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR TCA 90 bp CAAGAAACCAGTAACCCAGGCCCAGGAGTCCCTGCTATCCTAGTCCTCTTTCTTATAGGATGGGGACCCTaGAGGCCAGGTGCATTATCA +
Preference number: 2 (lower is better)
Translates to: QETSNPGPGVPAILVLFLIGWGP*RPGALS
Trigger: TGATAATGCACCTGGCCTTCAGGGTCCCCATCCTAT...AAGAAAGAGGACTAGGATAGCAGGGACTCCTGGGCCTGGGTTACTGGTTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR-3UTR CCA 90 bp TTCCTGGTTTATGGATGCAACCCCTTCACTCCATGCTACCTATTTGTTCCAATCGAGGAATTCTGCTCCTaGCCTCCCACCCAGCCCGTC +
Preference number: 2 (lower is better)
Translates to: FLVYGCNPFTPCYLFVPIEEFCS*PPTQPV
Trigger: GACGGGCTGGGTGGGAGGCCAGGAGCAGAATTCCTC...GATTGGAACAAATAGGTAGCATGGAGTGAAGGGGTTGCATCCATAAACCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR-3UTR CCA 90 bp CGGCTCCTTTTTGCAGTGGGGCTCAGCCTTTATAAAGCTATGAAACTGATGGATAGACCAGGAGGGGTATaGGGTCCTGCCCTCGAAAGG +
Preference number: 2 (lower is better)
Translates to: RLLFAVGLSLYKAMKLMDRPGGV*GPALER
Trigger: CCTTTCGAGGGCAGGACCCCATACCCCTCCTGGTCT...ATCCATCAGTTTCATAGCTTTATAAAGGCTGAGCCCCACTGCAAAAAGGAGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CAA 90 bp CCACGCGCATCAGCAGTGGGGCTGGAAGCCCATAAAGCGTTGGCCTaGAACTCAAGGATAAGAATCCATAAAGGAGAACAAAGCCTGGAT +
Preference number: 2 (lower is better)
Translates to: PRASAVGLEAHKALA*NSRIRIHKGEQSLD
Trigger: ATCCAGGCTTTGTTCTCCTTTATGGATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATGGGCTTCCAGCCCCACTGCTGATGCGCGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CAA 90 bp ATGGTGCCACGCGCATCAGCAGTGGGGCTGGAAGCCCATAAAGCGTaGGCCTTGAACTCAAGGATAAGAATCCATAAAGGAGAACAAAGC +
Preference number: 2 (lower is better)
Translates to: MVPRASAVGLEAHKA*ALNSRIRIHKGEQS
Trigger: GCTTTGTTCTCCTTTATGGATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATGGGCTTCCAGCCCCACTGCTGATGCGCGTGGCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CAA 90 bp ACATACACGCTCGCACACATGTACATCTACGTGAGAGCGAGAGACTaGAGCACACGCACGCGCACAGTGGAGAAGATGAAAATGGTACTT +
Preference number: 2 (lower is better)
Translates to: TYTLAHMYIYVRARD*STRTRTVEKMKMVL
Trigger: AAGTACCATTTTCATCTTCTCCACTGTGCGCGTGCGTGTGCTCAAGTCTCTCGCTCTCACGTAGATGTACATGTGTGCGAGCGTGTATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR GCA 90 bp GGGCTCCTCTTCCCTTGGTGGGGGAGGGGCCACCATTCAGATACCCACTTGTCTTACACAGCAGTCATTTaGTTAGAAGATAGACACATA +
Preference number: 2 (lower is better)
Translates to: GLLFPWWGRGHHSDTHLSYTAVI*LEDRHI
Trigger: TATGTGTCTATCTTCTAAGCAAATGACTGCTGTGTA...AGACAAGTGGGTATCTGAATGGTGGCCCCTCCCCCACCAAGGGAAGAGGAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR GCA 90 bp CAAATACTTATGGAGCAGAACGTGGCCGAAGTTCACCAGGATGAACCGTGTTCACACACGGCTCCTTTTTaGAGTGGGGCTCAGCCTTTA +
Preference number: 2 (lower is better)
Translates to: QILMEQNVAEVHQDEPCSHTAPF*SGAQPL
Trigger: TAAAGGCTGAGCCCCACTGCAAAAAGGAGCCGTGTG...TGAACACGGTTCATCCTGGTGAACTTCGGCCACGTTCTGCTCCATAAGTATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR-3UTR GCA 90 bp TCTCAGAAAAGAGATACAGAACTGGTCCAGAGCCCCTGTGGTTCTAGAAGGTGCTGTCGGGCTTTGGAATaGTCATACTGCTGCTTGGAC +
Preference number: 2 (lower is better)
Translates to: SQKRDTELVQSPCGSRRCCRALE*SYCCLD
Trigger: GTCCAAGCAGCAGTATGAGCATTCCAAAGCCCGACA...GCACCTTCTAGAACCACAGGGGCTCTGGACCAGTTCTGTATCTCTTTTCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR-3UTR CCA 90 bp AGTGTTAGTGTGAAGAGGACTCTCACAGAGATAAGTCTAAACAGAGTAGGGAAGGGCCTCTATGGGCAATaGTGCCACGCGCATCAGCAG +
Preference number: 2 (lower is better)
Translates to: SVSVKRTLTEISLNRVGKGLYGQ*CHAHQQ
Trigger: CTGCTGATGCGCGTGGCACCATTGCCCATAGAGGCC...CTTCCCTACTCTGTTTAGACTTATCTCTGTGAGAGTCCTCTTCACACTAACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR CCA 90 bp CAAATACTTATGGAGCAGAACGTGGCCGAAGTTCACCAGGATGAACCGTGTTCATTGGTTGGGTCAGGCTaGAGAATCTCCACTGAGGGA +
Preference number: 2 (lower is better)
Translates to: QILMEQNVAEVHQDEPCSLVGSG*RISTEG
Trigger: TCCCTCAGTGGAGATTCTCCAGCCTGACCCAACCAA...TGAACACGGTTCATCCTGGTGAACTTCGGCCACGTTCTGCTCCATAAGTATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR CAA 90 bp TACCTGACCAACAAGGTTGTGGGATTACAGATATTACTGAGCCTGTaGCCCATGAACAAGACTCCAAGGTGGGGTCTCCTACATCCACAC +
Preference number: 2 (lower is better)
Translates to: YLTNKVVGLQILLSL*PMNKTPRWGLLHPH
Trigger: GTGTGGATGTAGGAGACCCCACCTTGGAGTCTTGTTCATGGGCAACAGGCTCAGTAATATCTGTAATCCCACAACCTTGTTGGTCAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
3UTR CAA 90 bp GGGCTCAGCCTTTATAAAGCTATGAAACTGATGGATTCTCCAGGCTaGCACACTGAGAGTGAAATCAGCGACCATCTTCCTCCCCTAGGT +
Preference number: 2 (lower is better)
Translates to: GLSLYKAMKLMDSPG*HTESEISDHLPPLG
Trigger: ACCTAGGGGAGGAAGATGGTCGCTGATTTCACTCTCAGTGTGCAAGCCTGGAGAATCCATCAGTTTCATAGCTTTATAAAGGCTGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR TCA 90 bp CAGCAACTCGTGACAGCCGCACCTCACAACTACAGTGCAGGACAGTATCTACAGGCACAGTGGAGAAGATaGAAATGGTACTTCCTAAAG +
Preference number: 2 (lower is better)
Translates to: QQLVTAAPHNYSAGQYLQAQWRR*KWYFLK
Trigger: CTTTAGGAAGTACCATTTTCATCTTCTCCACTGTGC...CTGTAGATACTGTCCTGCACTGTAGTTGTGAGGTGCGGCTGTCACGAGTTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR CCA 90 bp CTCAGCAATAACCCTTCATCCTTTCTCAAGGTGAATCACTTTGGATGCTTCTATCTCCTCTTCCCTTGGTaGGGGAGGGGCCACCATTCA +
Preference number: 2 (lower is better)
Translates to: LSNNPSSFLKVNHFGCFYLLFPW*GRGHHS
Trigger: TGAATGGTGGCCCCTCCCCCACCAAGGGAAGAGGAG...ATAGAAGCATCCAAAGTGATTCACCTTGAGAAAGGATGAAGGGTTATTGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR CCA 90 bp CACATTGCTCAGACCTTCCTTATGGTTAAGCAAATAGCTCAGCTTTCAGTGTTAAGTGCCCCAGTGGCCTaGCTTGGGGTATTGACTGGC +
Preference number: 2 (lower is better)
Translates to: HIAQTFLMVKQIAQLSVLSAPVA*LGVLTG
Trigger: GCCAGTCAATACCCCAAGCCAGGCCACTGGGGCACT...TAACACTGAAAGCTGAGCTATTTGCTTAACCATAAGGAAGGTCTGAGCAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR CCA 90 bp TTCATCCTTTCTCAAGGTGAATCACTTTGGATGCTTCTATACAGTTTTAAGGGAGAGGAATTCTGCTCCTaGCCTCCCACCCAGCCCGTC +
Preference number: 2 (lower is better)
Translates to: FILSQGESLWMLLYSFKGEEFCS*PPTQPV
Trigger: GACGGGCTGGGTGGGAGGCCAGGAGCAGAATTCCTC...TCCCTTAAAACTGTATAGAAGCATCCAAAGTGATTCACCTTGAGAAAGGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR CCA 90 bp ATCAGAAGGTTTAGAGGTGGGAGAGACCATGAAGTGTCCTTTGAATTCTTGACTTGCTTAGGGTCACCTTaGGCTCCTCTTCCCTTGGTG +
Preference number: 2 (lower is better)
Translates to: IRRFRGGRDHEVSFEFLTCLGSP*APLPLV
Trigger: CACCAAGGGAAGAGGAGCCCAAGGTGACCCTAAGCA...AGTCAAGAATTCAAAGGACACTTCATGGTCTCTCCCACCTCTAAACCTTCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR-3UTR CCA 90 bp GAAGCCCATAAAGCGTTGGCCTTGAACTCAAGGATAAGAATCCATAAAGGAGAATGCTTAGGGTCACCTTaGGCTCCTCTTCCCTTGGTG +
Preference number: 2 (lower is better)
Translates to: EAHKALALNSRIRIHKGECLGSP*APLPLV
Trigger: CACCAAGGGAAGAGGAGCCCAAGGTGACCCTAAGCA...TTCTCCTTTATGGATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATGGGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR CCA 90 bp TCTCAGAAAAGAGATACAGAACTGGTCCAGAGCCCCTGTGGTTCTAGAAGGTGCGCCAATGTATCATATTaGAATATGGCACCCCTTCCC +
Preference number: 2 (lower is better)
Translates to: SQKRDTELVQSPCGSRRCANVSY*NMAPLP
Trigger: GGGAAGGGGTGCCATATTCCAATATGATACATTGGC...GCACCTTCTAGAACCACAGGGGCTCTGGACCAGTTCTGTATCTCTTTTCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR-3UTR CCA 90 bp TATGCATATAACACTGTTAATGAGGAGACGTCTAACCAAGAACAGGATTTATACGGACTGGGGAGGTGTTaGGTGGGCGGGTCTCTCTCC +
Preference number: 2 (lower is better)
Translates to: YAYNTVNEETSNQEQDLYGLGRC*VGGSLS
Trigger: GGAGAGAGACCCGCCCACCCAACACCTCCCCAGTCC...GTATAAATCCTGTTCTTGGTTAGACGTCTCCTCATTAACAGTGTTATATGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR-3UTR TCA 90 bp GAAGCCCATAAAGCGTTGGCCTTGAACTCAAGGATAAGAATCCATAAAGGAGAACTAAAGTTTGCGGCGTaGCTCGTGTTCTGGGTTGCT +
Preference number: 2 (lower is better)
Translates to: EAHKALALNSRIRIHKGELKFAA*LVFWVA
Trigger: AGCAACCCAGAACACGAGTCACGCCGCAAACTTTAG...TTCTCCTTTATGGATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATGGGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR CCA 90 bp CGGCTCCTTTTTGCAGTGGGGCTCAGCCTTTATAAAGCTATGAAACTGATGGATAGGAAGGATAAAGTGTaGGGGGACTTAATAGCCACC +
Preference number: 2 (lower is better)
Translates to: RLLFAVGLSLYKAMKLMDRKDKV*GDLIAT
Trigger: GGTGGCTATTAAGTCCCCCCACACTTTATCCTTCCT...ATCCATCAGTTTCATAGCTTTATAAAGGCTGAGCCCCACTGCAAAAAGGAGCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR CCA 90 bp AGTGTTAGTGTGAAGAGGACTCTCACAGAGATAAGTCTAAACAGAGTAGGGAAGGGGTCTATGTACACATaGACCATTCCCCTGGCATGC +
Preference number: 2 (lower is better)
Translates to: SVSVKRTLTEISLNRVGKGSMYT*TIPLAC
Trigger: GCATGCCAGGGGAATGGTCCATGTGTACATAGACCC...CTTCCCTACTCTGTTTAGACTTATCTCTGTGAGAGTCCTCTTCACACTAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR CCA 90 bp CTCAGCAATAACCCTTCATCCTTTCTCAAGGTGAATCACTTTGGATGCTTCTATGGGTCTATGTACACATaGACCATTCCCCTGGCATGC +
Preference number: 2 (lower is better)
Translates to: LSNNPSSFLKVNHFGCFYGSMYT*TIPLAC
Trigger: GCATGCCAGGGGAATGGTCCATGTGTACATAGACCC...ATAGAAGCATCCAAAGTGATTCACCTTGAGAAAGGATGAAGGGTTATTGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR TCA 90 bp AGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATGCTTTAGAGAAACAGATGTCCTTAGCATaGTGGAATCTTTACACAGCA +
Preference number: 2 (lower is better)
Translates to: STMGLCTHGPFPWHALEKQMSLA*WNLYTA
Trigger: TGCTGTGTAAAGATTCCATCATGCTAAGGACATCTG...TTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR TCA 90 bp AGAGGAGAGACATTCTTAAAAAGAATCTCAGATCTTGCTGGAGTTATGGGCAAACTAAAGTTTGCGGCGTaGCTCGTGTTCTGGGTTGCT +
Preference number: 2 (lower is better)
Translates to: RGETFLKRISDLAGVMGKLKFAA*LVFWVA
Trigger: AGCAACCCAGAACACGAGTCACGCCGCAAACTTTAG...TTTGCCCATAACTCCAGCAAGATCTGAGATTCTTTTTAAGAATGTCTCTCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR-3UTR TCA 90 bp ATCAGAAGGTTTAGAGGTGGGAGAGACCATGAAGTGTCCTTTGAATTCTTGACTTGTACAGTGATATTCTaGGTGACTCCCAGCTGGGTT +
Preference number: 2 (lower is better)
Translates to: IRRFRGGRDHEVSFEFLTCTVIF*VTPSWV
Trigger: AACCCAGCTGGGAGTCACTCAGAATATCACTGTACA...AGTCAAGAATTCAAAGGACACTTCATGGTCTCTCCCACCTCTAAACCTTCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR-3UTR GCA 90 bp GAAGCCCATAAAGCGTTGGCCTTGAACTCAAGGATAAGAATCCATAAAGGAGAAGTACTTCCTAAAGTTTaGGGCGTGACTCGTGTTCTG +
Preference number: 2 (lower is better)
Translates to: EAHKALALNSRIRIHKGEVLPKV*GVTRVL
Trigger: CAGAACACGAGTCACGCCGCAAACTTTAGGAAGTAC...TTCTCCTTTATGGATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATGGGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR CCA 90 bp GGTATGGTGAGTATTGTCTCCAGTTGGAGCAAAGACTTTTCACATTTAGTCGTTGAGCCATCCATTTCCTaGCCCTTACATTACCCCAGT +
Preference number: 2 (lower is better)
Translates to: GMVSIVSSWSKDFSHLVVEPSIS*PLHYPS
Trigger: ACTGGGGTAATGTAAGGGCCAGGAAATGGATGGCTC...AACGACTAAATGTGAAAAGTCTTTGCTCCAACTGGAGACAATACTCACCATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
3UTR-3UTR CCA 90 bp TACAGATGCCCTTTGTCCTTGGTAGATGAATGTAAGCCTCAGTGTGAAATCTCTAGGAAGGATAAAGTGTaGGGGGACTTAATAGCCACC +
Preference number: 2 (lower is better)
Translates to: YRCPLSLVDECKPQCEISRKDKV*GDLIAT
Trigger: GGTGGCTATTAAGTCCCCCCACACTTTATCCTTCCT...AGAGATTTCACACTGAGGCTTACATTCATCTACCAAGGACAAAGGGCATCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR CAA 90 bp TTCTTGGCTCCAATCCTGATACACCTTTCATGTTACAGATGCCCTTaGTCCTTGGTAGATGAATGTAAGCCTCAGTGTGAAATCTCTTCC +
Preference number: 2 (lower is better)
Translates to: FLAPILIHLSCYRCP*SLVDECKPQCEISS
Trigger: GGAAGAGATTTCACACTGAGGCTTACATTCATCTACCAAGGACAAAGGGCATCTGTAACATGAAAGGTGTATCAGGATTGGAGCCAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR-3UTR TCA 90 bp TTCATGTACAGTGATATTCTGAGTGACTCCCAGCTGGGTTCTGAAAATGAGACCCAGATGTCCTTAGCATaGTGGAATCTTTACACAGCA +
Preference number: 2 (lower is better)
Translates to: FMYSDILSDSQLGSENETQMSLA*WNLYTA
Trigger: TGCTGTGTAAAGATTCCATCATGCTAAGGACATCTG...GGTCTCATTTTCAGAACCCAGCTGGGAGTCACTCAGAATATCACTGTACATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR TCA 90 bp CACATTGCTCAGACCTTCCTTATGGTTAAGCAAATAGCTCAGCTTTCAGTGTTATGTACAGTGATATTCTaGGTGACTCCCAGCTGGGTT +
Preference number: 2 (lower is better)
Translates to: HIAQTFLMVKQIAQLSVLCTVIF*VTPSWV
Trigger: AACCCAGCTGGGAGTCACTCAGAATATCACTGTACA...TAACACTGAAAGCTGAGCTATTTGCTTAACCATAAGGAAGGTCTGAGCAATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR GCA 90 bp TTCATCCTTTCTCAAGGTGAATCACTTTGGATGCTTCTATACAGTTTTAAGGGACACACGGCTCCTTTTTaGAGTGGGGCTCAGCCTTTA +
Preference number: 2 (lower is better)
Translates to: FILSQGESLWMLLYSFKGHTAPF*SGAQPL
Trigger: TAAAGGCTGAGCCCCACTGCAAAAAGGAGCCGTGTG...TCCCTTAAAACTGTATAGAAGCATCCAAAGTGATTCACCTTGAGAAAGGATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR CCA 90 bp TTCATGTACAGTGATATTCTGAGTGACTCCCAGCTGGGTTCTGAAAATGAGACCGTATCTACAGCACAATaGGTCTATGTACACATGGAC +
Preference number: 2 (lower is better)
Translates to: FMYSDILSDSQLGSENETVSTAQ*VYVHMD
Trigger: GTCCATGTGTACATAGACCCATTGTGCTGTAGATAC...GGTCTCATTTTCAGAACCCAGCTGGGAGTCACTCAGAATATCACTGTACATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CAA 90 bp GCTCCAATCCTGATACACCTTTCATGTTACAGATGCCCTTTGTCCTaGGTAGATGAATGTAAGCCTCAGTGTGAAATCTCTTCCTACAAT +
Preference number: 2 (lower is better)
Translates to: APILIHLSCYRCPLS*VDECKPQCEISSYN
Trigger: ATTGTAGGAAGAGATTTCACACTGAGGCTTACATTCATCTACCAAGGACAAAGGGCATCTGTAACATGAAAGGTGTATCAGGATTGGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR-3UTR TCA 90 bp TTCCTGGTTTATGGATGCAACCCCTTCACTCCATGCTACCTATTTGTTCCAATCCCACCTGGTACTTCTTaGATAGTCTCATTTGTACAA +
Preference number: 2 (lower is better)
Translates to: FLVYGCNPFTPCYLFVPIPPGTS*IVSFVQ
Trigger: TTGTACAAATGAGACTATTCAAGAAGTACCAGGTGG...GATTGGAACAAATAGGTAGCATGGAGTGAAGGGGTTGCATCCATAAACCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR-3UTR TCA 90 bp CTCAGCAATAACCCTTCATCCTTTCTCAAGGTGAATCACTTTGGATGCTTCTATAGCACAGCTTGGTTTTaGATGCACACGGATATCATG +
Preference number: 2 (lower is better)
Translates to: LSNNPSSFLKVNHFGCFYSTAWF*MHTDIM
Trigger: CATGATATCCGTGTGCATTCAAAACCAAGCTGTGCT...ATAGAAGCATCCAAAGTGATTCACCTTGAGAAAGGATGAAGGGTTATTGCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR TCA 90 bp TTCCTGGTTTATGGATGCAACCCCTTCACTCCATGCTACCTATTTGTTCCAATCTCTCAGTTCTGCATGTaGCGTAGCAACATTCTAAAA +
Preference number: 2 (lower is better)
Translates to: FLVYGCNPFTPCYLFVPISQFCM*RSNILK
Trigger: TTTTAGAATGTTGCTACGTCACATGCAGAACTGAGA...GATTGGAACAAATAGGTAGCATGGAGTGAAGGGGTTGCATCCATAAACCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR-3UTR CCA 90 bp AGAGGAGAGACATTCTTAAAAAGAATCTCAGATCTTGCTGGAGTTATGGGCAAACATGGACCATTCCCCTaGCATGCTTTAGAGAAAGAC +
Preference number: 2 (lower is better)
Translates to: RGETFLKRISDLAGVMGKHGPFP*HALEKD
Trigger: GTCTTTCTCTAAAGCATGCCAGGGGAATGGTCCATG...TTTGCCCATAACTCCAGCAAGATCTGAGATTCTTTTTAAGAATGTCTCTCCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR-3UTR CCA 90 bp TATAATAGGATGGGGACCCTGAAGGCCAGGTGCATTATCAAAGCTTATGATATGGTATCTACAGCACAATaGGTCTATGTACACATGGAC +
Preference number: 2 (lower is better)
Translates to: YNRMGTLKARCIIKAYDMVSTAQ*VYVHMD
Trigger: GTCCATGTGTACATAGACCCATTGTGCTGTAGATAC...CATATCATAAGCTTTGATAATGCACCTGGCCTTCAGGGTCCCCATCCTATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR-3UTR GCA 90 bp AGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATGCTTTAGAGAAATACACAGCAGTCATTTaGTTAGAAGATAGACACATA +
Preference number: 2 (lower is better)
Translates to: STMGLCTHGPFPWHALEKYTAVI*LEDRHI
Trigger: TATGTGTCTATCTTCTAAGCAAATGACTGCTGTGTA...TTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR CCA 90 bp CCTTTAAAAGGACTGATCCCTTCTCTGCCAACTTTCAGGGTCTTCTCTGATCTTAGGAAAACTACTCTCTaGCATATTATAAGAGCCATC +
Preference number: 2 (lower is better)
Translates to: PLKGLIPSLPTFRVFSDLRKTTL*HIIRAI
Trigger: GATGGCTCTTATAATATGCCAGAGAGTAGTTTTCCT...AAGATCAGAGAAGACCCTGAAAGTTGGCAGAGAAGGGATCAGTCCTTTTAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
3UTR-3UTR CCA 90 bp TGTTACAGATGCCCTTTGTCCTTGGTAGATGAATGTAAGCCTCAGTGTGAAATCATACCCACTTGTCTCTaGAGATTTGCTCAATACACA +
Preference number: 2 (lower is better)
Translates to: CYRCPLSLVDECKPQCEIIPTCL*RFAQYT
Trigger: TGTGTATTGAGCAAATCTCCAGAGACAAGTGGGTAT...GATTTCACACTGAGGCTTACATTCATCTACCAAGGACAAAGGGCATCTGTAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR CAA 90 bp AAATCAGCAGATACACCTGGGAGTGACATTTTCATTCAAATGACTTaGTACCTTACTTTTAATCCATTGGCCTGTAGATCCACAAGGCTG +
Preference number: 2 (lower is better)
Translates to: KSADTPGSDIFIQMT*YLTFNPLACRSTRL
Trigger: CAGCCTTGTGGATCTACAGGCCAATGGATTAAAAGTAAGGTACAAAGTCATTTGAATGAAAATGTCACTCCCAGGTGTATCTGCTGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR-3UTR TCA 90 bp CACATTGCTCAGACCTTCCTTATGGTTAAGCAAATAGCTCAGCTTTCAGTGTTACCACCTGGTACTTCTTaGATAGTCTCATTTGTACAA +
Preference number: 2 (lower is better)
Translates to: HIAQTFLMVKQIAQLSVLPPGTS*IVSFVQ
Trigger: TTGTACAAATGAGACTATTCAAGAAGTACCAGGTGG...TAACACTGAAAGCTGAGCTATTTGCTTAACCATAAGGAAGGTCTGAGCAATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR CCA 90 bp CACATTGCTCAGACCTTCCTTATGGTTAAGCAAATAGCTCAGCTTTCAGTGTTAATACCCACTTGTCTCTaGAGATTTGCTCAATACACA +
Preference number: 2 (lower is better)
Translates to: HIAQTFLMVKQIAQLSVLIPTCL*RFAQYT
Trigger: TGTGTATTGAGCAAATCTCCAGAGACAAGTGGGTAT...TAACACTGAAAGCTGAGCTATTTGCTTAACCATAAGGAAGGTCTGAGCAATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CAA 90 bp AGAAGGTTTAGAGGTGGGAGAGACCATGAAGTGTCCTTTGAATTCTaGACTTTCCAGATGAGAAAACTAAAAACTCAGGAACTGGAATTA +
Preference number: 2 (lower is better)
Translates to: RRFRGGRDHEVSFEF*TFQMRKLKTQELEL
Trigger: TAATTCCAGTTCCTGAGTTTTTAGTTTTCTCATCTGGAAAGTCAAGAATTCAAAGGACACTTCATGGTCTCTCCCACCTCTAAACCTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR-3UTR TCA 90 bp TTCATCCTTTCTCAAGGTGAATCACTTTGGATGCTTCTATACAGTTTTAAGGGAGCACAGTGGAGAAGATaGAAATGGTACTTCCTAAAG +
Preference number: 2 (lower is better)
Translates to: FILSQGESLWMLLYSFKGAQWRR*KWYFLK
Trigger: CTTTAGGAAGTACCATTTTCATCTTCTCCACTGTGC...TCCCTTAAAACTGTATAGAAGCATCCAAAGTGATTCACCTTGAGAAAGGATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR GCA 90 bp TTCATCCTTTCTCAAGGTGAATCACTTTGGATGCTTCTATACAGTTTTAAGGGAACCATTCCCCTGGCATaGTTTAGAGAAAGACACATA +
Preference number: 2 (lower is better)
Translates to: FILSQGESLWMLLYSFKGTIPLA*FRERHI
Trigger: TATGTGTCTTTCTCTAAAGCATGCCAGGGGAATGGT...TCCCTTAAAACTGTATAGAAGCATCCAAAGTGATTCACCTTGAGAAAGGATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR GCA 90 bp CAAGGGTATGGTGAGTATTGTCTCCAGTTGGAGCAAAGACTTTTCACATTTAGTTCTATTTGTAAATATTaGTGTTTGTGGAGACTGACC +
Preference number: 2 (lower is better)
Translates to: QGYGEYCLQLEQRLFTFSSICKY*CLWRLT
Trigger: GGTCAGTCTCCACAAACAGCAATATTTACAAATAGA...ACTAAATGTGAAAAGTCTTTGCTCCAACTGGAGACAATACTCACCATACCCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
3UTR-3UTR CCA 90 bp GGTTTTGCAGACTCTCAGATTTATAATTTGAACCTAGGGTTTGCCTATATCCCTAGTATTGTCTCCAGTTaGAGCAAAGACTTTTCACAT +
Preference number: 2 (lower is better)
Translates to: GFADSQIYNLNLGFAYIPSIVSS*SKDFSH
Trigger: ATGTGAAAAGTCTTTGCTCCAACTGGAGACAATACT...AGGGATATAGGCAAACCCTAGGTTCAAATTATAAATCTGAGAGTCTGCAAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
3UTR-3UTR TCA 90 bp TTCATCCTTTCTCAAGGTGAATCACTTTGGATGCTTCTATACAGTTTTAAGGGAAAATGCAGTGTTACTTaGAGATTAGTGAAGGGACAA +
Preference number: 2 (lower is better)
Translates to: FILSQGESLWMLLYSFKGKCSVT*RLVKGQ
Trigger: TTGTCCCTTCACTAATCTTCAAGTAACACTGCATTT...TCCCTTAAAACTGTATAGAAGCATCCAAAGTGATTCACCTTGAGAAAGGATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR CCA 90 bp TCTGTCTCTCAGGGACATTTGAATCTAGAATTATATCTACCTGACCAACAAGGTACACAGATGAAAAACTaGGAAGTTATCCAAAGTAAG +
Preference number: 2 (lower is better)
Translates to: SVSQGHLNLELYLPDQQGTQMKN*EVIQSK
Trigger: CTTACTTTGGATAACTTCCCAGTTTTTCATCTGTGT...ACCTTGTTGGTCAGGTAGATATAATTCTAGATTCAAATGTCCCTGAGAGACAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
3UTR-3UTR CCA 90 bp TATGCATATAACACTGTTAATGAGGAGACGTCTAACCAAGAACAGGATTTATACGACTTAATAGCCACCTaGTACTTCTTGAATAGTCTC +
Preference number: 2 (lower is better)
Translates to: YAYNTVNEETSNQEQDLYDLIAT*YFLNSL
Trigger: GAGACTATTCAAGAAGTACCAGGTGGCTATTAAGTC...GTATAAATCCTGTTCTTGGTTAGACGTCTCCTCATTAACAGTGTTATATGCATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR-3UTR CCA 90 bp TATGCATATAACACTGTTAATGAGGAGACGTCTAACCAAGAACAGGATTTATACAGTGAGATCAGTGGATaGATTTTTCTGTCAATTGTA +
Preference number: 2 (lower is better)
Translates to: YAYNTVNEETSNQEQDLYSEISG*IFLSIV
Trigger: TACAATTGACAGAAAAATCCATCCACTGATCTCACT...GTATAAATCCTGTTCTTGGTTAGACGTCTCCTCATTAACAGTGTTATATGCATA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR CCA 72 bp GCCTGGCTTGGGGTATTGACTGGCCTCTATGGGCAATaGTGCCACGCGCATCAGCAGTGGGGCTGGAAGCCC +
Preference number: 3 (lower is better)
Translates to: AWLGVLTGLYGQ*CHAHQQWGWKP
Trigger: GGGCTTCCAGCCCCACTGCTGATGCGCGTGGCACCATTGCCCATAGAGGCCAGTCAATACCCCAAGCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CCA 72 bp AGTGAAGGGACAAAGCAGGTCTGCTTAGGGTCACCTTaGGCTCCTCTTCCCTTGGTGGGGGAGGGGCCACCA +
Preference number: 3 (lower is better)
Translates to: SEGTKQVCLGSP*APLPLVGEGPP
Trigger: TGGTGGCCCCTCCCCCACCAAGGGAAGAGGAGCCCAAGGTGACCCTAAGCAGACCTGCTTTGTCCCTTCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR CAA 90 bp GGGCTCCTCTTCCCTTGGTGGGGGAGGGGCCACCATTCAGATACCCACTTGTCTGACTCGTGTTCTGGGTaGCTGGGGCAAAAGGGAGGT +
Preference number: 3 (lower is better)
Translates to: GLLFPWWGRGHHSDTHLSDSCSG*LGQKGG
Trigger: ACCTCCCTTTTGCCCCAGCAACCCAGAACACGAGTC...AGACAAGTGGGTATCTGAATGGTGGCCCCTCCCCCACCAAGGGAAGAGGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR GCA 72 bp TGGCTTGGGGTATTGACTGGCCTCTATGGGCAATGGTaGCACGCGCATCAGCAGTGGGGCTGGAAGCCCATA +
Preference number: 3 (lower is better)
Translates to: WLGVLTGLYGQW*HAHQQWGWKPI
Trigger: TATGGGCTTCCAGCCCCACTGCTGATGCGCGTGGCACCATTGCCCATAGAGGCCAGTCAATACCCCAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CCA 72 bp AATCAGTGCCCCAGTGGCCTGGCTTGGGGTATTGACTaGCCTCTATGGGCAATGGTGCCACGCGCATCAGCA +
Preference number: 3 (lower is better)
Translates to: NQCPSGLAWGID*PLWAMVPRASA
Trigger: TGCTGATGCGCGTGGCACCATTGCCCATAGAGGCCAGTCAATACCCCAAGCCAGGCCACTGGGGCACTGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CCA 72 bp GAGAAGGCAGAACAGGGACGCTGCCAGCAGCCACAGTaGTACGGCCAGACTGACGGATCCGTTGATTCCTCT +
Preference number: 3 (lower is better)
Translates to: EKAEQGRCQQPQ*YGQTDGSVDSS
Trigger: AGAGGAATCAACGGATCCGTCAGTCTGGCCGTACCACTGTGGCTGCTGGCAGCGTCCCTGTTCTGCCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133853.3
3UTR CCA 72 bp GAAGGTGAGTGCAATCAGTGCCCCAGTGGCCTGGCTTaGGGTATTGACTGGCCTCTATGGGCAATGGTGCCA +
Preference number: 3 (lower is better)
Translates to: EGECNQCPSGLA*GIDWPLWAMVP
Trigger: TGGCACCATTGCCCATAGAGGCCAGTCAATACCCCAAGCCAGGCCACTGGGGCACTGATTGCACTCACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CCA 72 bp GTAGGGAAGGTGAGTGCAATCAGTGCCCCAGTGGCCTaGCTTGGGGTATTGACTGGCCTCTATGGGCAATGG +
Preference number: 3 (lower is better)
Translates to: VGKVSAISAPVA*LGVLTGLYGQW
Trigger: CCATTGCCCATAGAGGCCAGTCAATACCCCAAGCCAGGCCACTGGGGCACTGATTGCACTCACCTTCCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR GCA 72 bp TGTCGGGTGGACTCACGAGCACCATCCAAAAAGCTGTaGCTAGGAAGGATCGATGGGACTGGGGAGGTGTTG +
Preference number: 3 (lower is better)
Translates to: CRVDSRAPSKKL*LGRIDGTGEVL
Trigger: CAACACCTCCCCAGTCCCATCGATCCTTCCTAGGCACAGCTTTTTGGATGGTGCTCGTGAGTCCACCCGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR CCA 72 bp CCCAGCTGGGTTCTGAAAATGAGACCAGGAGGGGTATaGGGTCCTGCCCTCGAAAGGAGCACAGCTTGGTTT +
Preference number: 3 (lower is better)
Translates to: PSWVLKMRPGGV*GPALERSTAWF
Trigger: AAACCAAGCTGTGCTCCTTTCGAGGGCAGGACCCCATACCCCTCCTGGTCTCATTTTCAGAACCCAGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CCA 72 bp TCAAAAGAGGCTCCTGACGGGTGGCGAGGGTTGCTGTaGTACGCCAGGAAGCTAGCTCCGTGGATTTTCTTC +
Preference number: 3 (lower is better)
Translates to: SKEAPDGWRGLL*YARKLAPWIFF
Trigger: GAAGAAAATCCACGGAGCTAGCTTCCTGGCGTACCACAGCAACCCTCGCCACCCGTCAGGAGCCTCTTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR TCA 72 bp CCTAGGGTTGGTTGGGTCAGGCTGGAGAATCTCCACTaGGGGAGAAGGAGCAAAGAAAGCCAGCTGACCTTG +
Preference number: 3 (lower is better)
Translates to: PRVGWVRLENLH*GRRSKESQLTL
Trigger: CAAGGTCAGCTGGCTTTCTTTGCTCCTTCTCCCTCAGTGGAGATTCTCCAGCCTGACCCAACCAACCCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR GCA 72 bp CTATTAACATTTGCTGAGAAGGCAGAACAGGGACGCTaGCAGCAGCCACAGTGGTACGGCCAGACTGACGGA +
Preference number: 3 (lower is better)
Translates to: LLTFAEKAEQGR*QQPQWYGQTDG
Trigger: TCCGTCAGTCTGGCCGTACCACTGTGGCTGCTGGCAGCGTCCCTGTTCTGCCTTCTCAGCAAATGTTAATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133853.3
3UTR-3UTR CAA 90 bp CAAGAAACCAGTAACCCAGGCCCAGGAGTCCCTGCTATCCTAGTCCTCTTTCTTTCCGTTTGCCTAGGGTaGGTTGGGTCAGGCTGGAGA +
Preference number: 3 (lower is better)
Translates to: QETSNPGPGVPAILVLFLSVCLG*VGSGWR
Trigger: TCTCCAGCCTGACCCAACCAACCCTAGGCAAACGGA...AAGAAAGAGGACTAGGATAGCAGGGACTCCTGGGCCTGGGTTACTGGTTTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR GCA 72 bp AAGTCTAAACAGAGTAGGGAAGGTGAGTGCAATCAGTaGCCCAGTGGCCTGGCTTGGGGTATTGACTGGCCT +
Preference number: 3 (lower is better)
Translates to: KSKQSREGECNQ*PSGLAWGIDWP
Trigger: AGGCCAGTCAATACCCCAAGCCAGGCCACTGGGGCACTGATTGCACTCACCTTCCCTACTCTGTTTAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CCA 72 bp GGCCAACTCTGTTGGCGATGTGATGATGTCGGGCTTTaGAATGCTCATACTGCTGCTTGGACTCATCCCACA +
Preference number: 3 (lower is better)
Translates to: GQLCWRCDDVGL*NAHTAAWTHPT
Trigger: TGTGGGATGAGTCCAAGCAGCAGTATGAGCATTCCAAAGCCCGACATCATCACATCGCCAACAGAGTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR CAA 90 bp CCACCACATGCAGAGAGGCAGCCTTCCTGTAAGATGTCCCCTAGGCCAACTCTGGAGCACAGCTTGGTTTaGAATGCACACGGATATCAT +
Preference number: 3 (lower is better)
Translates to: PPHAERQPSCKMSPRPTLEHSLV*NAHGYH
Trigger: ATGATATCCGTGTGCATTCAAAACCAAGCTGTGCTC...CAGAGTTGGCCTAGGGGACATCTTACAGGAAGGCTGCCTCTCTGCATGTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR CAA 90 bp ATCTACAGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATGCTTTAGACTCGTGTTCTGGGTaGCTGGGGCAAAAGGGAGGT +
Preference number: 3 (lower is better)
Translates to: IYSTMGLCTHGPFPWHALDSCSG*LGQKGG
Trigger: ACCTCCCTTTTGCCCCAGCAACCCAGAACACGAGTC...TAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCTGTAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR GCA 72 bp CCAGCAACTCGTGACAGCCGCACCTCACAACTACAGTaGAGGACAGTATCTACAGCACAATGGGTCTATGTA +
Preference number: 3 (lower is better)
Translates to: PATRDSRTSQLQ*RTVSTAQWVYV
Trigger: TACATAGACCCATTGTGCTGTAGATACTGTCCTGCACTGTAGTTGTGAGGTGCGGCTGTCACGAGTTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR GCA 72 bp GGCCACCATTCAGATACCCACTTGTCTCTGGAGATTTaGTCAATACACACGGCTCCTTTTTGCAGTGGGGCT +
Preference number: 3 (lower is better)
Translates to: GHHSDTHLSLEI*SIHTAPFCSGA
Trigger: AGCCCCACTGCAAAAAGGAGCCGTGTGTATTGAGCAAATCTCCAGAGACAAGTGGGTATCTGAATGGTGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CCA 72 bp AGCCTTCCTGTAAGATGTCCCCTAGGCCAACTCTGTTaGCGATGTGATGATGTCGGGCTTTGGAATGCTCAT +
Preference number: 3 (lower is better)
Translates to: SLPVRCPLGQLC*RCDDVGLWNAH
Trigger: ATGAGCATTCCAAAGCCCGACATCATCACATCGCCAACAGAGTTGGCCTAGGGGACATCTTACAGGAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR CAA 90 bp CCACCACATGCAGAGAGGCAGCCTTCCTGTAAGATGTCCCCTAGGCCAACTCTGCAAATGCAGTGTTACTaGAAGATTAGTGAAGGGACA +
Preference number: 3 (lower is better)
Translates to: PPHAERQPSCKMSPRPTLQMQCY*KISEGT
Trigger: TGTCCCTTCACTAATCTTCAAGTAACACTGCATTTG...CAGAGTTGGCCTAGGGGACATCTTACAGGAAGGCTGCCTCTCTGCATGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR TCA 72 bp ATCTCCACTGAGGGAGAAGGAGCAAAGAAAGCCAGCTaGCCTTGGCTAGAAGAGCGTCTAAGTGTTCTGAGT +
Preference number: 3 (lower is better)
Translates to: ISTEGEGAKKAS*PWLEERLSVLS
Trigger: ACTCAGAACACTTAGACGCTCTTCTAGCCAAGGTCAGCTGGCTTTCTTTGCTCCTTCTCCCTCAGTGGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR GCA 72 bp TGTTACTTGAAGATTAGTGAAGGGACAAAGCAGGTCTaGTTAGGGTCACCTTGGGCTCCTCTTCCCTTGGTG +
Preference number: 3 (lower is better)
Translates to: CYLKISEGTKQV*LGSPWAPLPLV
Trigger: CACCAAGGGAAGAGGAGCCCAAGGTGACCCTAAGCAGACCTGCTTTGTCCCTTCACTAATCTTCAAGTAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CCA 72 bp GATGATGTCGGGCTTTGGAATGCTCATACTGCTGCTTaGACTCATCCCACATTGCTCAGACCTTCCTTATGG +
Preference number: 3 (lower is better)
Translates to: DDVGLWNAHTAA*THPTLLRPSLW
Trigger: CCATAAGGAAGGTCTGAGCAATGTGGGATGAGTCCAAGCAGCAGTATGAGCATTCCAAAGCCCGACATCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CCA 72 bp AGCACAATGGGTCTATGTACACATGGACCATTCCCCTaGCATGCTTTAGAGAAAGACACATACACGCTCGCA +
Preference number: 3 (lower is better)
Translates to: STMGLCTHGPFP*HALEKDTYTLA
Trigger: TGCGAGCGTGTATGTGTCTTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CCA 72 bp TCACAACTACAGTGCAGGACAGTATCTACAGCACAATaGGTCTATGTACACATGGACCATTCCCCTGGCATG +
Preference number: 3 (lower is better)
Translates to: SQLQCRTVSTAQ*VYVHMDHSPGM
Trigger: CATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCTGTAGATACTGTCCTGCACTGTAGTTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CCA 72 bp CGAGGGTTGCTGTGGTACGCCAGGAAGCTAGCTCCGTaGATTTTCTTCAATTGCAAGAAGCAGATTTTTACC +
Preference number: 3 (lower is better)
Translates to: RGLLWYARKLAP*IFFNCKKQIFT
Trigger: GGTAAAAATCTGCTTCTTGCAATTGAAGAAAATCCACGGAGCTAGCTTCCTGGCGTACCACAGCAACCCTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR-3UTR CAA 90 bp ATCAGAAGGTTTAGAGGTGGGAGAGACCATGAAGTGTCCTTTGAATTCTTGACTACACACGGCTCCTTTTaGCAGTGGGGCTCAGCCTTT +
Preference number: 3 (lower is better)
Translates to: IRRFRGGRDHEVSFEFLTTHGSF*QWGSAF
Trigger: AAAGGCTGAGCCCCACTGCAAAAAGGAGCCGTGTGT...AGTCAAGAATTCAAAGGACACTTCATGGTCTCTCCCACCTCTAAACCTTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR-3UTR CAA 90 bp CAAATACTTATGGAGCAGAACGTGGCCGAAGTTCACCAGGATGAACCGTGTTCAGGAACTGGAATTAACTaGCCTGTGTCAGCATCTCAC +
Preference number: 3 (lower is better)
Translates to: QILMEQNVAEVHQDEPCSGTGIN*PVSASH
Trigger: GTGAGATGCTGACACAGGCAAGTTAATTCCAGTTCC...TGAACACGGTTCATCCTGGTGAACTTCGGCCACGTTCTGCTCCATAAGTATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR TCA 72 bp AGATGTCACATGGTAGTCATCTCAGAGAGGACCCTGTaGCTGTGGGCTGAGAAGAAAGGACTTAAAAAGCAG +
Preference number: 3 (lower is better)
Translates to: RCHMVVISERTL*LWAEKKGLKKQ
Trigger: CTGCTTTTTAAGTCCTTTCTTCTCAGCCCACAGTCACAGGGTCCTCTCTGAGATGACTACCATGTGACATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR TCA 72 bp CCCAAAGCAACAGCCCCATTTTCTTGGCTCCAATCCTaGTACACCTTTCATGTTACAGATGCCCTTTGTCCT +
Preference number: 3 (lower is better)
Translates to: PKATAPFSWLQS*YTFHVTDALCP
Trigger: AGGACAAAGGGCATCTGTAACATGAAAGGTGTATCAGGATTGGAGCCAAGAAAATGGGGCTGTTGCTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR CCA 72 bp GGACAGTATCTACAGCACAATGGGTCTATGTACACATaGACCATTCCCCTGGCATGCTTTAGAGAAAGACAC +
Preference number: 3 (lower is better)
Translates to: GQYLQHNGSMYT*TIPLACFRERH
Trigger: GTGTCTTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCTGTAGATACTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR CAA 90 bp CCCTGTCTGCTCACCCCATTGATAGTAGGCACTTTCATGTACAGTGATATTCTGGAGCACAGCTTGGTTTaGAATGCACACGGATATCAT +
Preference number: 3 (lower is better)
Translates to: PCLLTPLIVGTFMYSDILEHSLV*NAHGYH
Trigger: ATGATATCCGTGTGCATTCAAAACCAAGCTGTGCTC...CAGAATATCACTGTACATGAAAGTGCCTACTATCAATGGGGTGAGCAGACAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR-3UTR CAA 90 bp TCTCAGAAAAGAGATACAGAACTGGTCCAGAGCCCCTGTGGTTCTAGAAGGTGCCAAATGCAGTGTTACTaGAAGATTAGTGAAGGGACA +
Preference number: 3 (lower is better)
Translates to: SQKRDTELVQSPCGSRRCQMQCY*KISEGT
Trigger: TGTCCCTTCACTAATCTTCAAGTAACACTGCATTTG...GCACCTTCTAGAACCACAGGGGCTCTGGACCAGTTCTGTATCTCTTTTCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR TCA 72 bp ACCCCAGAGCTTGTCCTTATAATAGGATGGGGACCCTaGAGGCCAGGTGCATTATCAAAGCTTATGATATGT +
Preference number: 3 (lower is better)
Translates to: TPELVLIIGWGP*RPGALSKLMIC
Trigger: ACATATCATAAGCTTTGATAATGCACCTGGCCTTCAGGGTCCCCATCCTATTATAAGGACAAGCTCTGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR TCA 72 bp GGAGCAAAACCAAATTCCTTCTTGAGGTTCACTTGGTaGCATTTGAGCAGCAGAGCTAAATGCAAACGAGGG +
Preference number: 3 (lower is better)
Translates to: GAKPNSFLRFTW*HLSSRAKCKRG
Trigger: CCCTCGTTTGCATTTAGCTCTGCTGCTCAAATGTCACCAAGTGAACCTCAAGAAGGAATTTGGTTTTGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR GCA 72 bp CTGCCAACTTTCAGGGTCTTCTCTGATCTTCAGAAATaGTCCCTTTCCTACGATTCTACCTCTGCTGCAAAT +
Preference number: 3 (lower is better)
Translates to: LPTFRVFSDLQK*SLSYDSTSAAN
Trigger: ATTTGCAGCAGAGGTAGAATCGTAGGAAAGGGAGCATTTCTGAAGATCAGAGAAGACCCTGAAAGTTGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
3UTR GCA 72 bp CTAAGCTTAACGCCAGCCACCTCACCAAGAAGAATGTaGTATACACTGGGAGCAAAACCAAATTCCTTCTTG +
Preference number: 3 (lower is better)
Translates to: LSLTPATSPRRM*YTLGAKPNSFL
Trigger: CAAGAAGGAATTTGGTTTTGCTCCCAGTGTATAGCACATTCTTCTTGGTGAGGTGGCTGGCGTTAAGCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR GCA 72 bp CCTTGGCTAGAAGAGCGTCTAAGTGTTCTGAGTGTCTaGTTCCTTTGGCTAAGGCAACACATTTGTAACCAT +
Preference number: 3 (lower is better)
Translates to: PWLEERLSVLSV*FLWLRQHICNH
Trigger: ATGGTTACAAATGTGTTGCCTTAGCCAAAGGAAGCAGACACTCAGAACACTTAGACGCTCTTCTAGCCAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR CCA 72 bp GCAAAGGATATGGAATCCGTGAGTGTTCCTGGTTTATaGATGCAACCCCTTCACTCCATGCTACCTATTTGT +
Preference number: 3 (lower is better)
Translates to: AKDMESVSVPGL*MQPLHSMLPIC
Trigger: ACAAATAGGTAGCATGGAGTGAAGGGGTTGCATCCATAAACCAGGAACACTCACGGATTCCATATCCTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR CCA 72 bp TTTGTATGCAAAGGATATGGAATCCGTGAGTGTTCCTaGTTTATGGATGCAACCCCTTCACTCCATGCTACC +
Preference number: 3 (lower is better)
Translates to: FVCKGYGIRECS*FMDATPSLHAT
Trigger: GGTAGCATGGAGTGAAGGGGTTGCATCCATAAACCAGGAACACTCACGGATTCCATATCCTTTGCATACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR CCA 72 bp GAAGAGCGTCTAAGTGTTCTGAGTGTCTGCTTCCTTTaGCTAAGGCAACACATTTGTAACCATGTCAGGCTT +
Preference number: 3 (lower is better)
Translates to: EERLSVLSVCFL*LRQHICNHVRL
Trigger: AAGCCTGACATGGTTACAAATGTGTTGCCTTAGCCAAAGGAAGCAGACACTCAGAACACTTAGACGCTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR-3UTR CAA 90 bp TACAGATGCCCTTTGTCCTTGGTAGATGAATGTAAGCCTCAGTGTGAAATCTCTCTTCTTGAGGTTCACTaGGTGACATTTGAGCAGCAG +
Preference number: 3 (lower is better)
Translates to: YRCPLSLVDECKPQCEISLLEVH*VTFEQQ
Trigger: CTGCTGCTCAAATGTCACCAAGTGAACCTCAAGAAG...AGAGATTTCACACTGAGGCTTACATTCATCTACCAAGGACAAAGGGCATCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR TCA 72 bp GCTACCCTCTTGGATAGGAATCCCCATCCTATCTCTTaGTCATCCATAAATACTTTTCTGCATCCTGAACCC +
Preference number: 3 (lower is better)
Translates to: ATLLDRNPHPIS*SSINTFLHPEP
Trigger: GGGTTCAGGATGCAGAAAAGTATTTATGGATGATCAAGAGATAGGATGGGGATTCCTATCCAAGAGGGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR GCA 72 bp TTGGCTCCAATCCTGATACACCTTTCATGTTACAGATaGCCTTTGTCCTTGGTAGATGAATGTAAGCCTCAG +
Preference number: 3 (lower is better)
Translates to: LAPILIHLSCYR*PLSLVDECKPQ
Trigger: CTGAGGCTTACATTCATCTACCAAGGACAAAGGGCATCTGTAACATGAAAGGTGTATCAGGATTGGAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR CCA 72 bp CCAATATTACGAACAAGGCAGCCACCTCAGCTATTTTaGTGCCCTCGCTTTAATATGAAAATGCCTTTCCTC +
Preference number: 3 (lower is better)
Translates to: PILRTRQPPQLF*CPRFNMKMPFL
Trigger: GAGGAAAGGCATTTTCATATTAAAGCGAGGGCACCAAAATAGCTGAGGTGGCTGCCTTGTTCGTAATATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR-3UTR CAA 90 bp TCCATTTCCTGGCCCTTACATTACCCCAGTTTCTTAAAGAGGCCACCACAAAAATGTAAATATTGCTGTTaGTGGAGACTGACCATCTCC +
Preference number: 3 (lower is better)
Translates to: SISWPLHYPSFLKRPPQKCKYCC*WRLTIS
Trigger: GGAGATGGTCAGTCTCCACAAACAGCAATATTTACA...TTTTTGTGGTGGCCTCTTTAAGAAACTGGGGTAATGTAAGGGCCAGGAAATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
3UTR-3UTR CAA 90 bp CACATTGCTCAGACCTTCCTTATGGTTAAGCAAATAGCTCAGCTTTCAGTGTTATGTCTGCTCACCCCATaGATAGTAGGCACTTTCATG +
Preference number: 3 (lower is better)
Translates to: HIAQTFLMVKQIAQLSVLCLLTP*IVGTFM
Trigger: CATGAAAGTGCCTACTATCAATGGGGTGAGCAGACA...TAACACTGAAAGCTGAGCTATTTGCTTAACCATAAGGAAGGTCTGAGCAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR GCA 72 bp GTTTTGATCACCAACTGCAAGGAGAACAGACAGTTCTaGAGTTGTAGAATCCAGGAAAGCTATCCTTCTTTG +
Preference number: 3 (lower is better)
Translates to: VLITNCKENRQF*SCRIQESYPSL
Trigger: CAAAGAAGGATAGCTTTCCTGGATTCTACAACTGCAGAACTGTCTGTTCTCCTTGCAGTTGGTGATCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR GCA 72 bp ATATTACGAACAAGGCAGCCACCTCAGCTATTTTGGTaGCCTCGCTTTAATATGAAAATGCCTTTCCTCTGT +
Preference number: 3 (lower is better)
Translates to: ILRTRQPPQLFW*PRFNMKMPFLC
Trigger: ACAGAGGAAAGGCATTTTCATATTAAAGCGAGGGCACCAAAATAGCTGAGGTGGCTGCCTTGTTCGTAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR GCA 72 bp TACGCCAGGAAGCTAGCTCCGTGGATTTTCTTCAATTaGAAGAAGCAGATTTTTACCGTGCCTAGATATTAC +
Preference number: 3 (lower is better)
Translates to: YARKLAPWIFFN*KKQIFTVPRYY
Trigger: GTAATATCTAGGCACGGTAAAAATCTGCTTCTTGCAATTGAAGAAAATCCACGGAGCTAGCTTCCTGGCGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR CCA 72 bp GGATGCTTCTATACAGTTTTAAGGGAAAGTAGCCACTaGTTTTCTAGCAAAGATAACCCACCACATGCAGAG +
Preference number: 3 (lower is better)
Translates to: GCFYTVLRESSH*FSSKDNPPHAE
Trigger: CTCTGCATGTGGTGGGTTATCTTTGCTAGAAAACCAGTGGCTACTTTCCCTTAAAACTGTATAGAAGCATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CCA 72 bp CCAGCATGTACTCTTCTAAGACTTTACTTAAGGATGTaGAGGGCTCTGAACATGGCAAACACATATCCTTCA +
Preference number: 3 (lower is better)
Translates to: PACTLLRLYLRM*RALNMANTYPS
Trigger: TGAAGGATATGTGTTTGCCATGTTCAGAGCCCTCCACATCCTTAAGTAAAGTCTTAGAAGAGTACATGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR-3UTR CAA 90 bp AGTGTTAGTGTGAAGAGGACTCTCACAGAGATAAGTCTAAACAGAGTAGGGAAGCATAAAGCGTTGGCCTaGAACTCAAGGATAAGAATC +
Preference number: 3 (lower is better)
Translates to: SVSVKRTLTEISLNRVGKHKALA*NSRIRI
Trigger: GATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATG...CTTCCCTACTCTGTTTAGACTTATCTCTGTGAGAGTCCTCTTCACACTAACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR GCA 72 bp AACCCTTCATCCTTTCTCAAGGTGAATCACTTTGGATaGTTCTATACAGTTTTAAGGGAAAGTAGCCACTGG +
Preference number: 3 (lower is better)
Translates to: NPSSFLKVNHFG*FYTVLRESSHW
Trigger: CCAGTGGCTACTTTCCCTTAAAACTGTATAGAAGCATCCAAAGTGATTCACCTTGAGAAAGGATGAAGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CCA 72 bp ACAGCCATTTCAAAGGTTAGAAAACTTGATGTGCCATaGCTCTGTAAGGTAACATCACATTATGACCTCAGC +
Preference number: 3 (lower is better)
Translates to: TAISKVRKLDVP*LCKVTSHYDLS
Trigger: GCTGAGGTCATAATGTGATGTTACCTTACAGAGCCATGGCACATCAAGTTTTCTAACCTTTGAAATGGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CCA 72 bp CAGTGGATGGATTTTTCTGTCAATTGTATGACATCTTaGTGTAGGCCATCTGGCCTGATAGTGATTCTAATC +
Preference number: 3 (lower is better)
Translates to: QWMDFSVNCMTS*CRPSGLIVILI
Trigger: GATTAGAATCACTATCAGGCCAGATGGCCTACACCAAGATGTCATACAATTGACAGAAAAATCCATCCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR-3UTR CAA 90 bp TATGCATATAACACTGTTAATGAGGAGACGTCTAACCAAGAACAGGATTTATACTGGACTCATCCCACATaGCTCAGACCTTCCTTATGG +
Preference number: 3 (lower is better)
Translates to: YAYNTVNEETSNQEQDLYWTHPT*LRPSLW
Trigger: CCATAAGGAAGGTCTGAGCAATGTGGGATGAGTCCA...GTATAAATCCTGTTCTTGGTTAGACGTCTCCTCATTAACAGTGTTATATGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR-3UTR CAA 90 bp TGTTACAGATGCCCTTTGTCCTTGGTAGATGAATGTAAGCCTCAGTGTGAAATCTTCATATCATCTCTCTaGATGAGTCTGTCAGTCGTT +
Preference number: 3 (lower is better)
Translates to: CYRCPLSLVDECKPQCEIFISSL*MSLSVV
Trigger: AACGACTGACAGACTCATCAAGAGAGATGATATGAA...GATTTCACACTGAGGCTTACATTCATCTACCAAGGACAAAGGGCATCTGTAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR TCA 72 bp AATGACCAGGAATTCTTTCCAAAGGAGATATTCCTCTaGCAAAACCCCAGAGCTTGTCCTTATAATAGGATG +
Preference number: 3 (lower is better)
Translates to: NDQEFFPKEIFL*QNPRACPYNRM
Trigger: CATCCTATTATAAGGACAAGCTCTGGGGTTTTGTCAGAGGAATATCTCCTTTGGAAAGAATTCCTGGTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR TCA 72 bp AAGTTTTCTACAATATCCATAAACATTCCACTGGCGTaGATGCTAAATCTAAACCTAAGCTTAACGCCAGCC +
Preference number: 3 (lower is better)
Translates to: KFSTISINIPLA*MLNLNLSLTPA
Trigger: GGCTGGCGTTAAGCTTAGGTTTAGATTTAGCATTCACGCCAGTGGAATGTTTATGGATATTGTAGAAAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR TCA 72 bp AGCCACCTCAGCTATTTTGGTGCCCTCGCTTTAATATaGAAATGCCTTTCCTCTGTATCTCTAAGAAATTTT +
Preference number: 3 (lower is better)
Translates to: SHLSYFGALALI*KCLSSVSLRNF
Trigger: AAAATTTCTTAGAGATACAGAGGAAAGGCATTTTCATATTAAAGCGAGGGCACCAAAATAGCTGAGGTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR CCA 72 bp ACTTCTAGAGAATCCTTGATTGCCAATGTATCATATTaGAATATGGCACCCCTTCCCTATGTATTACTAGCT +
Preference number: 3 (lower is better)
Translates to: TSRESLIANVSY*NMAPLPYVLLA
Trigger: AGCTAGTAATACATAGGGAAGGGGTGCCATATTCCAATATGATACATTGGCAATCAAGGATTCTCTAGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR CCA 72 bp AGGAGAGACATTCTTAAAAAGAATCTCAGATCTTGCTaGAGTTATGGGCAAACACCGCATTGTAAAAGAATC +
Preference number: 3 (lower is better)
Translates to: RRDILKKNLRSC*SYGQTPHCKRI
Trigger: GATTCTTTTACAATGCGGTGTTTGCCCATAACTCCAGCAAGATCTGAGATTCTTTTTAAGAATGTCTCTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR CCA 72 bp TCAAATGTAACACTGCTCTTACATTGTTATACAAACTaGCAGTTTACAGGGGAACCAAGACTAAATCTAGGC +
Preference number: 3 (lower is better)
Translates to: SNVTLLLHCYTN*QFTGEPRLNLG
Trigger: GCCTAGATTTAGTCTTGGTTCCCCTGTAAACTGCCAGTTTGTATAACAATGTAAGAGCAGTGTTACATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR CCA 72 bp GTAAGCCTCAGTGTGAAATCTCTTCCTACAATAGTCTaGTATGACATTCATATCATCTCTCTTGATGAGTCT +
Preference number: 3 (lower is better)
Translates to: VSLSVKSLPTIV*YDIHIISLDES
Trigger: AGACTCATCAAGAGAGATGATATGAATGTCATACCAGACTATTGTAGGAAGAGATTTCACACTGAGGCTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR GCA 72 bp GTTTTGTCTTATGAATGGCATAACTTTCACTTTGTATaGAAAGGATATGGAATCCGTGAGTGTTCCTGGTTT +
Preference number: 3 (lower is better)
Translates to: VLSYEWHNFHFV*KGYGIRECSWF
Trigger: AAACCAGGAACACTCACGGATTCCATATCCTTTGCATACAAAGTGAAAGTTATGCCATTCATAAGACAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR TCA 72 bp TGTCACAGGTATCCATTTTTGGAAACTAATACTAAATaGTGCGGAATTAACTCACATTTCCTTATTCCCACT +
Preference number: 3 (lower is better)
Translates to: CHRYPFLETNTK*CGINSHFLIPT
Trigger: AGTGGGAATAAGGAAATGTGAGTTAATTCCGCATCATTTAGTATTAGTTTCCAAAAATGGATACCTGTGACA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR TCA 72 bp CACTTGTTTGTATTCAGTACTTTGATTACCAACAAGTaGGATCAGTGGATGGATTTTTCTGTCAATTGTATG +
Preference number: 3 (lower is better)
Translates to: HLFVFSTLITNK*DQWMDFSVNCM
Trigger: CATACAATTGACAGAAAAATCCATCCACTGATCTCACTTGTTGGTAATCAAAGTACTGAATACAAACAAGTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
CDS-3UTR GCA 90 bp TGCCCCAGTGGCCTGGCTTGGGGTATTGACTGGCCTCTATGGGCAATGGTGCCAGCAGAACAGGGACGCTaGCAGCAGCCACAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: CPSGLAWGIDWPLWAMVPAEQGR*QQPQWY
Trigger: GTACCACTGTGGCTGCTGGCAGCGTCCCTGTTCTGC...TGGCACCATTGCCCATAGAGGCCAGTCAATACCCCAAGCCAGGCCACTGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CCA 90 bp CATGTGACGGCCATGAAAGGGGGAGGAATTCTGCTCCTGGCCTCCCACCCAGCCGTTCAGGGCGCCCATTaGCCATGCAGACCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: HVTAMKGGGILLLASHPAVQGAH*PCRPGL
Trigger: TAACCCTGGTCTGCATGGCCAATGGGCGCCCTGAAC...GGCTGGGTGGGAGGCCAGGAGCAGAATTCCTCCCCCTTTCATGGCCGTCACATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CAA 72 bp CTGTGCCTAGGAAGGATCGATGGGACTGGGGAGGTGTaGGGTGGGCGGGTCTCTCTCCCCTTACAGAGTGTC +
Preference number: 4 (lower is better)
Translates to: LCLGRIDGTGEV*GGRVSLPLQSV
Trigger: GACACTCTGTAAGGGGAGAGAGACCCGCCCACCCAACACCTCCCCAGTCCCATCGATCCTTCCTAGGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
CDS-3UTR TCA 90 bp CCACCACATGCAGAGAGGCAGCCTTCCTGTAAGATGTCCCCTAGGCCAACTCTGCCCCCTGTCTCACGGTaGTGTTGTCCGTGCCTCGGT +
Preference number: 4 (lower is better)
Translates to: PPHAERQPSCKMSPRPTLPPVSR*CCPCLG
Trigger: ACCGAGGCACGGACAACATCACCGTGAGACAGGGGG...CAGAGTTGGCCTAGGGGACATCTTACAGGAAGGCTGCCTCTCTGCATGTGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR TCA 90 bp CAGAACAGGGACGCTGCCAGCAGCCACAGTGGTACGGCCAGACTGACGGATCCGCATAGTGTTCCTCAGTaGCATTGGTCACCGTCAGGG +
Preference number: 4 (lower is better)
Translates to: QNRDAASSHSGTARLTDPHSVPQ*HWSPSG
Trigger: CCCTGACGGTGACCAATGTCACTGAGGAACACTATG...CGGATCCGTCAGTCTGGCCGTACCACTGTGGCTGCTGGCAGCGTCCCTGTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133853.3
CDS-3UTR TCA 90 bp AACAGGGACGCTGCCAGCAGCCACAGTGGTACGGCCAGACTGACGGATCCGTTGGTGGTGCCAATTTCTTaGATGGGGTGGGGGACTGTG +
Preference number: 4 (lower is better)
Translates to: NRDAASSHSGTARLTDPLVVPIS*MGWGTV
Trigger: CACAGTCCCCCACCCCATTCAAGAAATTGGCACCAC...CAACGGATCCGTCAGTCTGGCCGTACCACTGTGGCTGCTGGCAGCGTCCCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000133853.3
CDS-3UTR GCA 90 bp GGGCTCCTCTTCCCTTGGTGGGGGAGGGGCCACCATTCAGATACCCACTTGTCTGGCGCCCATTGGCCATaGAGACCAGGGTTACATTGC +
Preference number: 4 (lower is better)
Translates to: GLLFPWWGRGHHSDTHLSGAHWP*RPGLHC
Trigger: GCAATGTAACCCTGGTCTGCATGGCCAATGGGCGCC...AGACAAGTGGGTATCTGAATGGTGGCCCCTCCCCCACCAAGGGAAGAGGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CCA 90 bp CATGTGACGGCCATGAAAGGGGGAGGAATTCTGCTCCTGGCCTCCCACCCAGCCACCGTCAGGGAGGACTaGCCCTCAGTGCTCTTAATC +
Preference number: 4 (lower is better)
Translates to: HVTAMKGGGILLLASHPATVRED*PSVLLI
Trigger: GATTAAGAGCACTGAGGGCCAGTCCTCCCTGACGGT...GGCTGGGTGGGAGGCCAGGAGCAGAATTCCTCCCCCTTTCATGGCCGTCACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CAA 72 bp CAGGTCTGCTTAGGGTCACCTTGGGCTCCTCTTCCCTaGGTGGGGGAGGGGCCACCATTCAGATACCCACTT +
Preference number: 4 (lower is better)
Translates to: QVCLGSPWAPLP*VGEGPPFRYPL
Trigger: AAGTGGGTATCTGAATGGTGGCCCCTCCCCCACCAAGGGAAGAGGAGCCCAAGGTGACCCTAAGCAGACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CAA 72 bp AGTGCAATCAGTGCCCCAGTGGCCTGGCTTGGGGTATaGACTGGCCTCTATGGGCAATGGTGCCACGCGCAT +
Preference number: 4 (lower is better)
Translates to: SAISAPVAWLGV*TGLYGQWCHAH
Trigger: ATGCGCGTGGCACCATTGCCCATAGAGGCCAGTCAATACCCCAAGCCAGGCCACTGGGGCACTGATTGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CCA 90 bp GACGCTGCCAGCAGCCACAGTGGTACGGCCAGACTGACGGATCCGTTGATTCCTACCGTCAGGGAGGACTaGCCCTCAGTGCTCTTAATC +
Preference number: 4 (lower is better)
Translates to: DAASSHSGTARLTDPLIPTVRED*PSVLLI
Trigger: GATTAAGAGCACTGAGGGCCAGTCCTCCCTGACGGT...AGGAATCAACGGATCCGTCAGTCTGGCCGTACCACTGTGGCTGCTGGCAGCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133853.3
CDS-3UTR TCA 90 bp GGGCTCCTCTTCCCTTGGTGGGGGAGGGGCCACCATTCAGATACCCACTTGTCTCTGAGGCTTCACATTTaGGGGAAGCTTGTCGTCCTG +
Preference number: 4 (lower is better)
Translates to: GLLFPWWGRGHHSDTHLSLRLHI*GKLVVL
Trigger: CAGGACGACAAGCTTCCCTCAAATGTGAAGCCTCAG...AGACAAGTGGGTATCTGAATGGTGGCCCCTCCCCCACCAAGGGAAGAGGAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CCA 90 bp GGGCTCCTCTTCCCTTGGTGGGGGAGGGGCCACCATTCAGATACCCACTTGTCTCTTGTCGTCCTGTGGTaGCTTCGTTGCTCTTCGACT +
Preference number: 4 (lower is better)
Translates to: GLLFPWWGRGHHSDTHLSLVVLW*LRCSST
Trigger: AGTCGAAGAGCAACGAAGCCACCACAGGACGACAAG...AGACAAGTGGGTATCTGAATGGTGGCCCCTCCCCCACCAAGGGAAGAGGAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CCA 90 bp CAGAACAGGGACGCTGCCAGCAGCCACAGTGGTACGGCCAGACTGACGGATCCGTTGCACTGTTTATCCTaGTGTCATCCCGGTACCACT +
Preference number: 4 (lower is better)
Translates to: QNRDAASSHSGTARLTDPLHCLS*CHPGTT
Trigger: AGTGGTACCGGGATGACACCAGGATAAACAGTGCAA...CGGATCCGTCAGTCTGGCCGTACCACTGTGGCTGCTGGCAGCGTCCCTGTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133853.3
3UTR CAA 72 bp AGCAGCCACAGTGGTACGGCCAGACTGACGGATCCGTaGATTCCTCTCACCGACCCGGGTCCTGATGTCATT +
Preference number: 4 (lower is better)
Translates to: SSHSGTARLTDP*IPLTDPGPDVI
Trigger: AATGACATCAGGACCCGGGTCGGTGAGAGGAATCAACGGATCCGTCAGTCTGGCCGTACCACTGTGGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133853.3
CDS-3UTR TCA 90 bp CATGTGACGGCCATGAAAGGGGGAGGAATTCTGCTCCTGGCCTCCCACCCAGCCCAACCAGGCCACTTTTaGGTTCTTGTCTTCTACCAC +
Preference number: 4 (lower is better)
Translates to: HVTAMKGGGILLLASHPAQPGHF*VLVFYH
Trigger: GTGGTAGAAGACAAGAACTCAAAAGTGGCCTGGTTG...GGCTGGGTGGGAGGCCAGGAGCAGAATTCCTCCCCCTTTCATGGCCGTCACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR TCA 90 bp CAGCCACAGTGGTACGGCCAGACTGACGGATCCGTTGATTCCTCTCACCGACCCTTTCACCTTTTGGCTTaGAGTGCACGGTGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: QPQWYGQTDGSVDSSHRPFHLLA*SARWCQ
Trigger: TTGGCACCACCGTGCACTTCAAGCCAAAAGGTGAAA...GGGTCGGTGAGAGGAATCAACGGATCCGTCAGTCTGGCCGTACCACTGTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133853.3
CDS-3UTR CCA 90 bp GACAAAGCAGGTCTGCTTAGGGTCACCTTGGGCTCCTCTTCCCTTGGTGGGGGACCGAGGAGACCTCGTTaGCAGCCTTGCACTCATATT +
Preference number: 4 (lower is better)
Translates to: DKAGLLRVTLGSSSLGGGPRRPR*QPCTHI
Trigger: AATATGAGTGCAAGGCTGCCAACGAGGTCTCCTCGG...TCCCCCACCAAGGGAAGAGGAGCCCAAGGTGACCCTAAGCAGACCTGCTTTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR TCA 90 bp CAGCCACAGTGGTACGGCCAGACTGACGGATCCGTTGATTCCTCTCACCGACCCTGGGTAAAACACGCTTaGAAAGGACTAGGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: QPQWYGQTDGSVDSSHRPWVKHA*KGLGWH
Trigger: ATGCCAGCCTAGTCCTTTTCAAGCGTGTTTTACCCA...GGGTCGGTGAGAGGAATCAACGGATCCGTCAGTCTGGCCGTACCACTGTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133853.3
CDS-3UTR GCA 90 bp CAGCAACTCGTGACAGCCGCACCTCACAACTACAGTGCAGGACAGTATCTACAGGGCGCCCATTGGCCATaGAGACCAGGGTTACATTGC +
Preference number: 4 (lower is better)
Translates to: QQLVTAAPHNYSAGQYLQGAHWP*RPGLHC
Trigger: GCAATGTAACCCTGGTCTGCATGGCCAATGGGCGCC...CTGTAGATACTGTCCTGCACTGTAGTTGTGAGGTGCGGCTGTCACGAGTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CCA 90 bp CCACCACATGCAGAGAGGCAGCCTTCCTGTAAGATGTCCCCTAGGCCAACTCTGCCGAGGAGACCTCGTTaGCAGCCTTGCACTCATATT +
Preference number: 4 (lower is better)
Translates to: PPHAERQPSCKMSPRPTLPRRPR*QPCTHI
Trigger: AATATGAGTGCAAGGCTGCCAACGAGGTCTCCTCGG...CAGAGTTGGCCTAGGGGACATCTTACAGGAAGGCTGCCTCTCTGCATGTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CAA 72 bp CCTTGGTGGGGGAGGGGCCACCATTCAGATACCCACTaGTCTCTGGAGATTTGCTCAATACACACGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PWWGRGHHSDTH*SLEICSIHTAP
Trigger: AGGAGCCGTGTGTATTGAGCAAATCTCCAGAGACAAGTGGGTATCTGAATGGTGGCCCCTCCCCCACCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR TCA 90 bp GCAGGACAGTATCTACAGCACAATGGGTCTATGTACACATGGACCATTCCCCTGAGGTGCAGGCACCGCTaGGGCTTCACATTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: AGQYLQHNGSMYTWTIPLRCRHR*GFTFEG
Trigger: TCCCTCAAATGTGAAGCCTCAGCGGTGCCTGCACCT...CAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCTGTAGATACTGTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR TCA 90 bp CCACCACATGCAGAGAGGCAGCCTTCCTGTAAGATGTCCCCTAGGCCAACTCTGTGCCAAGACTTGCAATaGGAAGAGGGACAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: PPHAERQPSCKMSPRPTLCQDLQ*EEGQEE
Trigger: TTCTTCCTGTCCCTCTTCTCATTGCAAGTCTTGGCA...CAGAGTTGGCCTAGGGGACATCTTACAGGAAGGCTGCCTCTCTGCATGTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187695.7
CDS-3UTR GCA 90 bp AGGGACGCTGCCAGCAGCCACAGTGGTACGGCCAGACTGACGGATCCGTTGATTAATCTCAAGGCCATTTaGACTGTTTATCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: RDAASSHSGTARLTDPLINLKAI*TVYPGV
Trigger: GACACCAGGATAAACAGTGCAAATGGCCTTGAGATT...AATCAACGGATCCGTCAGTCTGGCCGTACCACTGTGGCTGCTGGCAGCGTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133853.3
CDS-3UTR GCA 90 bp TGCCCCAGTGGCCTGGCTTGGGGTATTGACTGGCCTCTATGGGCAATGGTGCCAAATCTCAAGGCCATTTaGACTGTTTATCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: CPSGLAWGIDWPLWAMVPNLKAI*TVYPGV
Trigger: GACACCAGGATAAACAGTGCAAATGGCCTTGAGATT...TGGCACCATTGCCCATAGAGGCCAGTCAATACCCCAAGCCAGGCCACTGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CCA 90 bp GACAGCCGCACCTCACAACTACAGTGCAGGACAGTATCTACAGCACAATGGGTCCTGTATTCCAGAGCATaGCGCTTCTCCAGCTCAACC +
Preference number: 4 (lower is better)
Translates to: DSRTSQLQCRTVSTAQWVLYSRA*RFSSST
Trigger: GGTTGAGCTGGAGAAGCGCCATGCTCTGGAATACAG...GACCCATTGTGCTGTAGATACTGTCCTGCACTGTAGTTGTGAGGTGCGGCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CCA 90 bp ACAAGACTCCAAGGTGGGGTCTCCTACATCCACACCTTTAAAAGGACTGATCCCGTTCAGGGCGCCCATTaGCCATGCAGACCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: TRLQGGVSYIHTFKRTDPVQGAH*PCRPGL
Trigger: TAACCCTGGTCTGCATGGCCAATGGGCGCCCTGAAC...GGGATCAGTCCTTTTAAAGGTGTGGATGTAGGAGACCCCACCTTGGAGTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
3UTR CAA 72 bp CTCGCACACATGTACATCTACGTGAGAGCGAGAGACTaGAGCACACGCACGCGCACAGTGGAGAAGATGAAA +
Preference number: 4 (lower is better)
Translates to: LAHMYIYVRARD*STRTRTVEKMK
Trigger: TTTCATCTTCTCCACTGTGCGCGTGCGTGTGCTCAAGTCTCTCGCTCTCACGTAGATGTACATGTGTGCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CAA 72 bp GGGCCACCATTCAGATACCCACTTGTCTCTGGAGATTaGCTCAATACACACGGCTCCTTTTTGCAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GPPFRYPLVSGD*LNTHGSFLQWG
Trigger: GCCCCACTGCAAAAAGGAGCCGTGTGTATTGAGCAAATCTCCAGAGACAAGTGGGTATCTGAATGGTGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CAA 72 bp GCTATCCTAGTCCTCTTTCTTTCCGTTTGCCTAGGGTaGGTTGGGTCAGGCTGGAGAATCTCCACTGAGGGA +
Preference number: 4 (lower is better)
Translates to: AILVLFLSVCLG*VGSGWRISTEG
Trigger: TCCCTCAGTGGAGATTCTCCAGCCTGACCCAACCAACCCTAGGCAAACGGAAAGAAAGAGGACTAGGATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR CAA 72 bp AGGAGTCCCTGCTATCCTAGTCCTCTTTCTTTCCGTTaGCCTAGGGTTGGTTGGGTCAGGCTGGAGAATCTC +
Preference number: 4 (lower is better)
Translates to: RSPCYPSPLSFR*PRVGWVRLENL
Trigger: GAGATTCTCCAGCCTGACCCAACCAACCCTAGGCAAACGGAAAGAAAGAGGACTAGGATAGCAGGGACTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
CDS-3UTR TCA 90 bp GGGTCTCCTACATCCACACCTTTAAAAGGACTGATCCCTTCTCTGCCAACTTTCAGGTGCAGGCACCGCTaGGGCTTCACATTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: GSPTSTPLKGLIPSLPTFRCRHR*GFTFEG
Trigger: TCCCTCAAATGTGAAGCCTCAGCGGTGCCTGCACCT...GAAAGTTGGCAGAGAAGGGATCAGTCCTTTTAAAGGTGTGGATGTAGGAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR TCA 90 bp CAGGGGAGCCTGAGAAAGGCTCAACACAGGTTTCCGTTGATAGTCCAAAATGGCCATAGTGTTCCTCAGTaGCATTGGTCACCGTCAGGG +
Preference number: 4 (lower is better)
Translates to: QGSLRKAQHRFPLIVQNGHSVPQ*HWSPSG
Trigger: CCCTGACGGTGACCAATGTCACTGAGGAACACTATG...GCCATTTTGGACTATCAACGGAAACCTGTGTTGAGCCTTTCTCAGGCTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR GCA 90 bp TTCATGTACAGTGATATTCTGAGTGACTCCCAGCTGGGTTCTGAAAATGAGACCGCAGAACAGGGACGCTaGCAGCAGCCACAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: FMYSDILSDSQLGSENETAEQGR*QQPQWY
Trigger: GTACCACTGTGGCTGCTGGCAGCGTCCCTGTTCTGC...GGTCTCATTTTCAGAACCCAGCTGGGAGTCACTCAGAATATCACTGTACATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CCA 90 bp AGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATGCTTTAGAGAAAGAACGGGCAGTCCTGTaGGAAGAAGGCAGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: STMGLCTHGPFPWHALEKERAVL*EEGRAV
Trigger: GACTGCTCTGCCTTCTTCCCACAGGACTGCCCGTTC...TTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
CDS-3UTR CCA 90 bp GCAGGACAGTATCTACAGCACAATGGGTCTATGTACACATGGACCATTCCCCTGAAGCTTGTCGTCCTGTaGTGGCTTCGTTGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: AGQYLQHNGSMYTWTIPLKLVVL*WLRCSS
Trigger: CGAAGAGCAACGAAGCCACCACAGGACGACAAGCTT...CAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCTGTAGATACTGTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CCA 90 bp GGGTCTCCTACATCCACACCTTTAAAAGGACTGATCCCTTCTCTGCCAACTTTCACCGTCAGGGAGGACTaGCCCTCAGTGCTCTTAATC +
Preference number: 4 (lower is better)
Translates to: GSPTSTPLKGLIPSLPTFTVRED*PSVLLI
Trigger: GATTAAGAGCACTGAGGGCCAGTCCTCCCTGACGGT...GAAAGTTGGCAGAGAAGGGATCAGTCCTTTTAAAGGTGTGGATGTAGGAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
3UTR CAA 72 bp ATGGGGTCCTGCCCTCGAAAGGAGCACAGCTTGGTTTaGAATGCACACGGATATCATGTGACGGCCATGAAA +
Preference number: 4 (lower is better)
Translates to: MGSCPRKEHSLV*NAHGYHVTAMK
Trigger: TTTCATGGCCGTCACATGATATCCGTGTGCATTCAAAACCAAGCTGTGCTCCTTTCGAGGGCAGGACCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CAA 72 bp CGCGCATCAGCAGTGGGGCTGGAAGCCCATAAAGCGTaGGCCTTGAACTCAAGGATAAGAATCCATAAAGGA +
Preference number: 4 (lower is better)
Translates to: RASAVGLEAHKA*ALNSRIRIHKG
Trigger: TCCTTTATGGATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATGGGCTTCCAGCCCCACTGCTGATGCGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR TCA 90 bp CACATTGCTCAGACCTTCCTTATGGTTAAGCAAATAGCTCAGCTTTCAGTGTTACCCCCTGTCTCACGGTaGTGTTGTCCGTGCCTCGGT +
Preference number: 4 (lower is better)
Translates to: HIAQTFLMVKQIAQLSVLPPVSR*CCPCLG
Trigger: ACCGAGGCACGGACAACATCACCGTGAGACAGGGGG...TAACACTGAAAGCTGAGCTATTTGCTTAACCATAAGGAAGGTCTGAGCAATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CCA 90 bp GACAGTATCTACAGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATAAGCTTGTCGTCCTGTaGTGGCTTCGTTGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: DSIYSTMGLCTHGPFPWHKLVVL*WLRCSS
Trigger: CGAAGAGCAACGAAGCCACCACAGGACGACAAGCTT...ATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCTGTAGATACTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CCA 90 bp TGTTACAGATGCCCTTTGTCCTTGGTAGATGAATGTAAGCCTCAGTGTGAAATCTGCCAGCAGCCACAGTaGTACGGCCAGACTGACGGA +
Preference number: 4 (lower is better)
Translates to: CYRCPLSLVDECKPQCEICQQPQ*YGQTDG
Trigger: TCCGTCAGTCTGGCCGTACCACTGTGGCTGCTGGCA...GATTTCACACTGAGGCTTACATTCATCTACCAAGGACAAAGGGCATCTGTAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
CDS-3UTR CCA 90 bp GAAGCCCATAAAGCGTTGGCCTTGAACTCAAGGATAAGAATCCATAAAGGAGAATGCCAGCAGCCACAGTaGTACGGCCAGACTGACGGA +
Preference number: 4 (lower is better)
Translates to: EAHKALALNSRIRIHKGECQQPQ*YGQTDG
Trigger: TCCGTCAGTCTGGCCGTACCACTGTGGCTGCTGGCA...TTCTCCTTTATGGATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATGGGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CAA 72 bp CAGGGGAGCCTGAGAAAGGCTCAACACAGGTTTCCGTaGATAGTCCAAAATGGCGACACATCAGCTCAAATG +
Preference number: 4 (lower is better)
Translates to: QGSLRKAQHRFP*IVQNGDTSAQM
Trigger: CATTTGAGCTGATGTGTCGCCATTTTGGACTATCAACGGAAACCTGTGTTGAGCCTTTCTCAGGCTCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR TCA 90 bp GGTTTTGCAGACTCTCAGATTTATAATTTGAACCTAGGGTTTGCCTATATCCCTCCCCCTGTCTCACGGTaGTGTTGTCCGTGCCTCGGT +
Preference number: 4 (lower is better)
Translates to: GFADSQIYNLNLGFAYIPPPVSR*CCPCLG
Trigger: ACCGAGGCACGGACAACATCACCGTGAGACAGGGGG...AGGGATATAGGCAAACCCTAGGTTCAAATTATAAATCTGAGAGTCTGCAAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR TCA 90 bp ATCTACAGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATGCTTTATGCCCTCATTCACAGTaGCATCCGAGGAGATGTTGG +
Preference number: 4 (lower is better)
Translates to: IYSTMGLCTHGPFPWHALCPHSQ*HPRRCW
Trigger: CCAACATCTCCTCGGATGTCACTGTGAATGAGGGCA...TAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCTGTAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR TCA 90 bp AGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATGCTTTAGAGAAACTGACTGTTCCCTGGTaGTGCCTAGGATCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: STMGLCTHGPFPWHALEKLTVPW*CLGSPD
Trigger: ATCTGGAGATCCTAGGCATCACCAGGGAACAGTCAG...TTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR TCA 90 bp CGGCTCCTTTTTGCAGTGGGGCTCAGCCTTTATAAAGCTATGAAACTGATGGATGCACTCATATTTGCCTaGCTGTTCCCTGGTGATGCC +
Preference number: 4 (lower is better)
Translates to: RLLFAVGLSLYKAMKLMDALIFA*LFPGDA
Trigger: GGCATCACCAGGGAACAGTCAGGCAAATATGAGTGC...ATCCATCAGTTTCATAGCTTTATAAAGGCTGAGCCCCACTGCAAAAAGGAGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR TCA 90 bp AGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATGCTTTAGAGAAACTGAGGCTTCACATTTaGGGGAAGCTTGTCGTCCTG +
Preference number: 4 (lower is better)
Translates to: STMGLCTHGPFPWHALEKLRLHI*GKLVVL
Trigger: CAGGACGACAAGCTTCCCTCAAATGTGAAGCCTCAG...TTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR TCA 90 bp TGTTACAGATGCCCTTTGTCCTTGGTAGATGAATGTAAGCCTCAGTGTGAAATCAGGTGCAGGCACCGCTaGGGCTTCACATTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: CYRCPLSLVDECKPQCEIRCRHR*GFTFEG
Trigger: TCCCTCAAATGTGAAGCCTCAGCGGTGCCTGCACCT...GATTTCACACTGAGGCTTACATTCATCTACCAAGGACAAAGGGCATCTGTAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
CDS-3UTR CCA 90 bp CGGCTCCTTTTTGCAGTGGGGCTCAGCCTTTATAAAGCTATGAAACTGATGGATCTTGTCGTCCTGTGGTaGCTTCGTTGCTCTTCGACT +
Preference number: 4 (lower is better)
Translates to: RLLFAVGLSLYKAMKLMDLVVLW*LRCSST
Trigger: AGTCGAAGAGCAACGAAGCCACCACAGGACGACAAG...ATCCATCAGTTTCATAGCTTTATAAAGGCTGAGCCCCACTGCAAAAAGGAGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR GCA 90 bp AAACATTCTGTCTACCCTTCCTCTTGTGCTAGGAGAAACATTTTCCTTTTCCAGGGCGCCCATTGGCCATaGAGACCAGGGTTACATTGC +
Preference number: 4 (lower is better)
Translates to: KHSVYPSSCARRNIFLFQGAHWP*RPGLHC
Trigger: GCAATGTAACCCTGGTCTGCATGGCCAATGGGCGCC...CTGGAAAAGGAAAATGTTTCTCCTAGCACAAGAGGAAGGGTAGACAGAATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR GCA 90 bp CGGCTCCTTTTTGCAGTGGGGCTCAGCCTTTATAAAGCTATGAAACTGATGGATCCTCGTTGGCAGCCTTaGACTCATATTTGCCTGACT +
Preference number: 4 (lower is better)
Translates to: RLLFAVGLSLYKAMKLMDPRWQP*THICLT
Trigger: AGTCAGGCAAATATGAGTGCAAGGCTGCCAACGAGG...ATCCATCAGTTTCATAGCTTTATAAAGGCTGAGCCCCACTGCAAAAAGGAGCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CCA 90 bp AAACATTCTGTCTACCCTTCCTCTTGTGCTAGGAGAAACATTTTCCTTTTCCAGGAACGGGCAGTCCTGTaGGAAGAAGGCAGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: KHSVYPSSCARRNIFLFQERAVL*EEGRAV
Trigger: GACTGCTCTGCCTTCTTCCCACAGGACTGCCCGTTC...CTGGAAAAGGAAAATGTTTCTCCTAGCACAAGAGGAAGGGTAGACAGAATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR CCA 90 bp CAGCAACTCGTGACAGCCGCACCTCACAACTACAGTGCAGGACAGTATCTACAGGATGTTGGAGATCTTTaGTGGAACTTGTACGATCAA +
Preference number: 4 (lower is better)
Translates to: QQLVTAAPHNYSAGQYLQDVGDL*WNLYDQ
Trigger: TTGATCGTACAAGTTCCACCAAAGATCTCCAACATC...CTGTAGATACTGTCCTGCACTGTAGTTGTGAGGTGCGGCTGTCACGAGTTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CCA 90 bp TCCATTTCCTGGCCCTTACATTACCCCAGTTTCTTAAAGAGGCCACCACAAAAACCGAGGAGACCTCGTTaGCAGCCTTGCACTCATATT +
Preference number: 4 (lower is better)
Translates to: SISWPLHYPSFLKRPPQKPRRPR*QPCTHI
Trigger: AATATGAGTGCAAGGCTGCCAACGAGGTCTCCTCGG...TTTTTGTGGTGGCCTCTTTAAGAAACTGGGGTAATGTAAGGGCCAGGAAATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR CCA 90 bp GAACAAGACTCCAAGGTGGGGTCTCCTACATCCACACCTTTAAAAGGACTGATCTTGCACTGTTTATCCTaGTGTCATCCCGGTACCACT +
Preference number: 4 (lower is better)
Translates to: EQDSKVGSPTSTPLKGLILHCLS*CHPGTT
Trigger: AGTGGTACCGGGATGACACCAGGATAAACAGTGCAA...GATCAGTCCTTTTAAAGGTGTGGATGTAGGAGACCCCACCTTGGAGTCTTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR CCA 90 bp GACAGTATCTACAGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATTTGCACTGTTTATCCTaGTGTCATCCCGGTACCACT +
Preference number: 4 (lower is better)
Translates to: DSIYSTMGLCTHGPFPWHLHCLS*CHPGTT
Trigger: AGTGGTACCGGGATGACACCAGGATAAACAGTGCAA...ATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCTGTAGATACTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CCA 90 bp GACAGTATCTACAGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATACTTCAGCAGGAGGCTaGTTCCAAAATGCCAAGACT +
Preference number: 4 (lower is better)
Translates to: DSIYSTMGLCTHGPFPWHTSAGG*FQNAKT
Trigger: AGTCTTGGCATTTTGGAACCAGCCTCCTGCTGAAGT...ATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCTGTAGATACTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187695.7
CDS-3UTR TCA 90 bp GAAGCCCATAAAGCGTTGGCCTTGAACTCAAGGATAAGAATCCATAAAGGAGAATGCCCTCATTCACAGTaGCATCCGAGGAGATGTTGG +
Preference number: 4 (lower is better)
Translates to: EAHKALALNSRIRIHKGECPHSQ*HPRRCW
Trigger: CCAACATCTCCTCGGATGTCACTGTGAATGAGGGCA...TTCTCCTTTATGGATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATGGGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CCA 90 bp GAAGCCCATAAAGCGTTGGCCTTGAACTCAAGGATAAGAATCCATAAAGGAGAACTGTATTCCAGAGCATaGCGCTTCTCCAGCTCAACC +
Preference number: 4 (lower is better)
Translates to: EAHKALALNSRIRIHKGELYSRA*RFSSST
Trigger: GGTTGAGCTGGAGAAGCGCCATGCTCTGGAATACAG...TTCTCCTTTATGGATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATGGGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CCA 90 bp AGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATGCTTTAGAGAAAAAACTTGGGAGGTCTTaGGCTCATGCTGTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: STMGLCTHGPFPWHALEKKLGRS*AHAVSE
Trigger: TTCAGACACAGCATGAGCCCAAGACCTCCCAAGTTT...TTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CCA 90 bp CAAGAAACCAGTAACCCAGGCCCAGGAGTCCCTGCTATCCTAGTCCTCTTTCTTGTTGGAGATCTTTGGTaGAACTTGTACGATCAAGTA +
Preference number: 4 (lower is better)
Translates to: QETSNPGPGVPAILVLFLVGDLW*NLYDQV
Trigger: TACTTGATCGTACAAGTTCCACCAAAGATCTCCAAC...AAGAAAGAGGACTAGGATAGCAGGGACTCCTGGGCCTGGGTTACTGGTTTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR CAA 72 bp AACAAGGTTGTGGGATTACAGATATTACTGAGCCTGTaGCCCATGAACAAGACTCCAAGGTGGGGTCTCCTA +
Preference number: 4 (lower is better)
Translates to: NKVVGLQILLSL*PMNKTPRWGLL
Trigger: TAGGAGACCCCACCTTGGAGTCTTGTTCATGGGCAACAGGCTCAGTAATATCTGTAATCCCACAACCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
3UTR CAA 72 bp TCAGCAGTGGGGCTGGAAGCCCATAAAGCGTTGGCCTaGAACTCAAGGATAAGAATCCATAAAGGAGAACAA +
Preference number: 4 (lower is better)
Translates to: SAVGLEAHKALA*NSRIRIHKGEQ
Trigger: TTGTTCTCCTTTATGGATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATGGGCTTCCAGCCCCACTGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CAA 72 bp TTGTGTGGCGAGACCCAAAGCAACAGCCCCATTTTCTaGGCTCCAATCCTGATACACCTTTCATGTTACAGA +
Preference number: 4 (lower is better)
Translates to: LCGETQSNSPIF*APILIHLSCYR
Trigger: TCTGTAACATGAAAGGTGTATCAGGATTGGAGCCAAGAAAATGGGGCTGTTGCTTTGGGTCTCGCCACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
CDS-3UTR TCA 90 bp TCCATTTCCTGGCCCTTACATTACCCCAGTTTCTTAAAGAGGCCACCACAAAAAATGCTGTGTCTGAACTaGGCATGTGTAGGATCCTTC +
Preference number: 4 (lower is better)
Translates to: SISWPLHYPSFLKRPPQKMLCLN*ACVGSF
Trigger: GAAGGATCCTACACATGCTCAGTTCAGACACAGCAT...TTTTTGTGGTGGCCTCTTTAAGAAACTGGGGTAATGTAAGGGCCAGGAAATGGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR TCA 90 bp CACATTGCTCAGACCTTCCTTATGGTTAAGCAAATAGCTCAGCTTTCAGTGTTACTGACTGTTCCCTGGTaGTGCCTAGGATCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: HIAQTFLMVKQIAQLSVLLTVPW*CLGSPD
Trigger: ATCTGGAGATCCTAGGCATCACCAGGGAACAGTCAG...TAACACTGAAAGCTGAGCTATTTGCTTAACCATAAGGAAGGTCTGAGCAATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR TCA 90 bp CAAGGGTATGGTGAGTATTGTCTCCAGTTGGAGCAAAGACTTTTCACATTTAGTGCACTCATATTTGCCTaGCTGTTCCCTGGTGATGCC +
Preference number: 4 (lower is better)
Translates to: QGYGEYCLQLEQRLFTFSALIFA*LFPGDA
Trigger: GGCATCACCAGGGAACAGTCAGGCAAATATGAGTGC...ACTAAATGTGAAAAGTCTTTGCTCCAACTGGAGACAATACTCACCATACCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR TCA 90 bp CTCAGCAATAACCCTTCATCCTTTCTCAAGGTGAATCACTTTGGATGCTTCTATCATAGTGTTCCTCAGTaGCATTGGTCACCGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LSNNPSSFLKVNHFGCFYHSVPQ*HWSPSG
Trigger: CCCTGACGGTGACCAATGTCACTGAGGAACACTATG...ATAGAAGCATCCAAAGTGATTCACCTTGAGAAAGGATGAAGGGTTATTGCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CCA 90 bp CAAGGGTATGGTGAGTATTGTCTCCAGTTGGAGCAAAGACTTTTCACATTTAGTCTGTATTCCAGAGCATaGCGCTTCTCCAGCTCAACC +
Preference number: 4 (lower is better)
Translates to: QGYGEYCLQLEQRLFTFSLYSRA*RFSSST
Trigger: GGTTGAGCTGGAGAAGCGCCATGCTCTGGAATACAG...ACTAAATGTGAAAAGTCTTTGCTCCAACTGGAGACAATACTCACCATACCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR TCA 90 bp GAAGCCCATAAAGCGTTGGCCTTGAACTCAAGGATAAGAATCCATAAAGGAGAAATGCTGTGTCTGAACTaGGCATGTGTAGGATCCTTC +
Preference number: 4 (lower is better)
Translates to: EAHKALALNSRIRIHKGEMLCLN*ACVGSF
Trigger: GAAGGATCCTACACATGCTCAGTTCAGACACAGCAT...TTCTCCTTTATGGATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATGGGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR TCA 90 bp GGTTTTGCAGACTCTCAGATTTATAATTTGAACCTAGGGTTTGCCTATATCCCTTGCCCTCATTCACAGTaGCATCCGAGGAGATGTTGG +
Preference number: 4 (lower is better)
Translates to: GFADSQIYNLNLGFAYIPCPHSQ*HPRRCW
Trigger: CCAACATCTCCTCGGATGTCACTGTGAATGAGGGCA...AGGGATATAGGCAAACCCTAGGTTCAAATTATAAATCTGAGAGTCTGCAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR TCA 90 bp GGTTTTGCAGACTCTCAGATTTATAATTTGAACCTAGGGTTTGCCTATATCCCTCTGACTGTTCCCTGGTaGTGCCTAGGATCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: GFADSQIYNLNLGFAYIPLTVPW*CLGSPD
Trigger: ATCTGGAGATCCTAGGCATCACCAGGGAACAGTCAG...AGGGATATAGGCAAACCCTAGGTTCAAATTATAAATCTGAGAGTCTGCAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR TCA 90 bp AGAGGAGAGACATTCTTAAAAAGAATCTCAGATCTTGCTGGAGTTATGGGCAAAGCACTCATATTTGCCTaGCTGTTCCCTGGTGATGCC +
Preference number: 4 (lower is better)
Translates to: RGETFLKRISDLAGVMGKALIFA*LFPGDA
Trigger: GGCATCACCAGGGAACAGTCAGGCAAATATGAGTGC...TTTGCCCATAACTCCAGCAAGATCTGAGATTCTTTTTAAGAATGTCTCTCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
CDS-3UTR CCA 90 bp TATGCATATAACACTGTTAATGAGGAGACGTCTAACCAAGAACAGGATTTATACGTTCAGGGCGCCCATTaGCCATGCAGACCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: YAYNTVNEETSNQEQDLYVQGAH*PCRPGL
Trigger: TAACCCTGGTCTGCATGGCCAATGGGCGCCCTGAAC...GTATAAATCCTGTTCTTGGTTAGACGTCTCCTCATTAACAGTGTTATATGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
CDS-3UTR CCA 90 bp ACGATTCTACCTCTGCTGCAAATGGTGAATCAGCAATGTAAACTTACTGTCATACTTGTCGTCCTGTGGTaGCTTCGTTGCTCTTCGACT +
Preference number: 4 (lower is better)
Translates to: TILPLLQMVNQQCKLTVILVVLW*LRCSST
Trigger: AGTCGAAGAGCAACGAAGCCACCACAGGACGACAAG...TATGACAGTAAGTTTACATTGCTGATTCACCATTTGCAGCAGAGGTAGAATCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR CCA 90 bp TCTGTCTCTCAGGGACATTTGAATCTAGAATTATATCTACCTGACCAACAAGGTAAGCTTGTCGTCCTGTaGTGGCTTCGTTGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: SVSQGHLNLELYLPDQQGKLVVL*WLRCSS
Trigger: CGAAGAGCAACGAAGCCACCACAGGACGACAAGCTT...ACCTTGTTGGTCAGGTAGATATAATTCTAGATTCAAATGTCCCTGAGAGACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR CCA 90 bp ATCAGAAGGTTTAGAGGTGGGAGAGACCATGAAGTGTCCTTTGAATTCTTGACTTTGCACTGTTTATCCTaGTGTCATCCCGGTACCACT +
Preference number: 4 (lower is better)
Translates to: IRRFRGGRDHEVSFEFLTLHCLS*CHPGTT
Trigger: AGTGGTACCGGGATGACACCAGGATAAACAGTGCAA...AGTCAAGAATTCAAAGGACACTTCATGGTCTCTCCCACCTCTAAACCTTCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
CDS-3UTR CCA 90 bp GACAGTATCTACAGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATTCCTGGGATTGTGATTaGAGACAAATTTACTTCAGC +
Preference number: 4 (lower is better)
Translates to: DSIYSTMGLCTHGPFPWHSWDCD*RQIYFS
Trigger: GCTGAAGTAAATTTGTCTCCAATCACAATCCCAGGA...ATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCTGTAGATACTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187695.7
3UTR CAA 72 bp TTCTGCAGTTGTAGAATCCAGGAAAGCTATCCTTCTTaGGGGCCTGCCCTAGGTCAAGGTAATTTCTACTTT +
Preference number: 4 (lower is better)
Translates to: FCSCRIQESYPS*GPALGQGNFYF
Trigger: AAAGTAGAAATTACCTTGACCTAGGGCAGGCCCCAAAGAAGGATAGCTTTCCTGGATTCTACAACTGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR CAA 72 bp ACAAGAAAAATGTGCCTCTCACGAGGCAAAGTTGTTTaGATCACCAACTGCAAGGAGAACAGACAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: TRKMCLSRGKVV*ITNCKENRQFC
Trigger: GCAGAACTGTCTGTTCTCCTTGCAGTTGGTGATCAAAACAACTTTGCCTCGTGAGAGGCACATTTTTCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
CDS-3UTR GCA 90 bp GAAGCCCATAAAGCGTTGGCCTTGAACTCAAGGATAAGAATCCATAAAGGAGAACAAAATGCCAAGACTTaGAATGAGAAGAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: EAHKALALNSRIRIHKGEQNAKT*NEKRDR
Trigger: CCTGTCCCTCTTCTCATTGCAAGTCTTGGCATTTTG...TTCTCCTTTATGGATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATGGGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187695.7
CDS-3UTR CCA 90 bp GGTATGGTGAGTATTGTCTCCAGTTGGAGCAAAGACTTTTCACATTTAGTCGTTAAACTTGGGAGGTCTTaGGCTCATGCTGTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: GMVSIVSSWSKDFSHLVVKLGRS*AHAVSE
Trigger: TTCAGACACAGCATGAGCCCAAGACCTCCCAAGTTT...AACGACTAAATGTGAAAAGTCTTTGCTCCAACTGGAGACAATACTCACCATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR CCA 90 bp CGGCTCCTTTTTGCAGTGGGGCTCAGCCTTTATAAAGCTATGAAACTGATGGATGATGTTGGAGATCTTTaGTGGAACTTGTACGATCAA +
Preference number: 4 (lower is better)
Translates to: RLLFAVGLSLYKAMKLMDDVGDL*WNLYDQ
Trigger: TTGATCGTACAAGTTCCACCAAAGATCTCCAACATC...ATCCATCAGTTTCATAGCTTTATAAAGGCTGAGCCCCACTGCAAAAAGGAGCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CCA 90 bp GAACAAGACTCCAAGGTGGGGTCTCCTACATCCACACCTTTAAAAGGACTGATCTTTACCTTTAAGGGATaGCGGATAGATTTCAAGTCA +
Preference number: 4 (lower is better)
Translates to: EQDSKVGSPTSTPLKGLIFTFKG*RIDFKS
Trigger: TGACTTGAAATCTATCCGCCATCCCTTAAAGGTAAA...GATCAGTCCTTTTAAAGGTGTGGATGTAGGAGACCCCACCTTGGAGTCTTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
3UTR CAA 72 bp CTTTATAAAGCTATGAAACTGATGGATTCTCCAGGCTaGCACACTGAGAGTGAAATCAGCGACCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: LYKAMKLMDSPG*HTESEISDHLP
Trigger: AGGAAGATGGTCGCTGATTTCACTCTCAGTGTGCAAGCCTGGAGAATCCATCAGTTTCATAGCTTTATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR TCA 90 bp AATAGTTCTTCTATTTGTAAATATTGCTGTTTGTGGAGACTGACCATCTCCACTCTGAGGCTTCACATTTaGGGGAAGCTTGTCGTCCTG +
Preference number: 4 (lower is better)
Translates to: NSSSICKYCCLWRLTISTLRLHI*GKLVVL
Trigger: CAGGACGACAAGCTTCCCTCAAATGTGAAGCCTCAG...AGTGGAGATGGTCAGTCTCCACAAACAGCAATATTTACAAATAGAAGAACTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR TCA 90 bp AATAGTTCTTCTATTTGTAAATATTGCTGTTTGTGGAGACTGACCATCTCCACTCATAGTGTTCCTCAGTaGCATTGGTCACCGTCAGGG +
Preference number: 4 (lower is better)
Translates to: NSSSICKYCCLWRLTISTHSVPQ*HWSPSG
Trigger: CCCTGACGGTGACCAATGTCACTGAGGAACACTATG...AGTGGAGATGGTCAGTCTCCACAAACAGCAATATTTACAAATAGAAGAACTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR CCA 90 bp AGAGGAGAGACATTCTTAAAAAGAATCTCAGATCTTGCTGGAGTTATGGGCAAAAAACTTGGGAGGTCTTaGGCTCATGCTGTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: RGETFLKRISDLAGVMGKKLGRS*AHAVSE
Trigger: TTCAGACACAGCATGAGCCCAAGACCTCCCAAGTTT...TTTGCCCATAACTCCAGCAAGATCTGAGATTCTTTTTAAGAATGTCTCTCCTCT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
CDS-3UTR CCA 90 bp CCTTTAAAAGGACTGATCCCTTCTCTGCCAACTTTCAGGGTCTTCTCTGATCTTGTTGGAGATCTTTGGTaGAACTTGTACGATCAAGTA +
Preference number: 4 (lower is better)
Translates to: PLKGLIPSLPTFRVFSDLVGDLW*NLYDQV
Trigger: TACTTGATCGTACAAGTTCCACCAAAGATCTCCAAC...AAGATCAGAGAAGACCCTGAAAGTTGGCAGAGAAGGGATCAGTCCTTTTAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
3UTR CAA 72 bp CCAATTAAGGGCATTATGGAGCAAATGCAGTGTTACTaGAAGATTAGTGAAGGGACAAAGCAGGTCTGCTTA +
Preference number: 4 (lower is better)
Translates to: PIKGIMEQMQCY*KISEGTKQVCL
Trigger: TAAGCAGACCTGCTTTGTCCCTTCACTAATCTTCAAGTAACACTGCATTTGCTCCATAATGCCCTTAATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
3UTR CAA 72 bp CTGATACACCTTTCATGTTACAGATGCCCTTTGTCCTaGGTAGATGAATGTAAGCCTCAGTGTGAAATCTCT +
Preference number: 4 (lower is better)
Translates to: LIHLSCYRCPLS*VDECKPQCEIS
Trigger: AGAGATTTCACACTGAGGCTTACATTCATCTACCAAGGACAAAGGGCATCTGTAACATGAAAGGTGTATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
CDS-3UTR TCA 90 bp GTAGGTTTTGCAGACTCTCAGATTTATAATTTGAACCTAGGGTTTGCCTATATCCAACCAGGCCACTTTTaGGTTCTTGTCTTCTACCAC +
Preference number: 4 (lower is better)
Translates to: VGFADSQIYNLNLGFAYIQPGHF*VLVFYH
Trigger: GTGGTAGAAGACAAGAACTCAAAAGTGGCCTGGTTG...GATATAGGCAAACCCTAGGTTCAAATTATAAATCTGAGAGTCTGCAAAACCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR GCA 90 bp AATAGTTCTTCTATTTGTAAATATTGCTGTTTGTGGAGACTGACCATCTCCACTCCTCGTTGGCAGCCTTaGACTCATATTTGCCTGACT +
Preference number: 4 (lower is better)
Translates to: NSSSICKYCCLWRLTISTPRWQP*THICLT
Trigger: AGTCAGGCAAATATGAGTGCAAGGCTGCCAACGAGG...AGTGGAGATGGTCAGTCTCCACAAACAGCAATATTTACAAATAGAAGAACTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR GCA 90 bp TCCATTTCCTGGCCCTTACATTACCCCAGTTTCTTAAAGAGGCCACCACAAAAAGATTTCAAGTCAATATaGAGGAACTCTATGACTTGC +
Preference number: 4 (lower is better)
Translates to: SISWPLHYPSFLKRPPQKDFKSI*RNSMTC
Trigger: GCAAGTCATAGAGTTCCTGCATATTGACTTGAAATC...TTTTTGTGGTGGCCTCTTTAAGAAACTGGGGTAATGTAAGGGCCAGGAAATGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR CCA 90 bp AGTGTTAGTGTGAAGAGGACTCTCACAGAGATAAGTCTAAACAGAGTAGGGAAGGTTGGAGATCTTTGGTaGAACTTGTACGATCAAGTA +
Preference number: 4 (lower is better)
Translates to: SVSVKRTLTEISLNRVGKVGDLW*NLYDQV
Trigger: TACTTGATCGTACAAGTTCCACCAAAGATCTCCAAC...CTTCCCTACTCTGTTTAGACTTATCTCTGTGAGAGTCCTCTTCACACTAACACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR TCA 90 bp TATGCATATAACACTGTTAATGAGGAGACGTCTAACCAAGAACAGGATTTATACATGCTGTGTCTGAACTaGGCATGTGTAGGATCCTTC +
Preference number: 4 (lower is better)
Translates to: YAYNTVNEETSNQEQDLYMLCLN*ACVGSF
Trigger: GAAGGATCCTACACATGCTCAGTTCAGACACAGCAT...GTATAAATCCTGTTCTTGGTTAGACGTCTCCTCATTAACAGTGTTATATGCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
CDS-3UTR TCA 90 bp GGTTTTGCAGACTCTCAGATTTATAATTTGAACCTAGGGTTTGCCTATATCCCTTTTTGGCATACTTACTaGAAAGGACTAGGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: GFADSQIYNLNLGFAYIPFWHTY*KGLGWH
Trigger: ATGCCAGCCTAGTCCTTTTCAGTAAGTATGCCAAAA...AGGGATATAGGCAAACCCTAGGTTCAAATTATAAATCTGAGAGTCTGCAAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR GCA 90 bp GGTTTTGCAGACTCTCAGATTTATAATTTGAACCTAGGGTTTGCCTATATCCCTAATCTCAAGGCCATTTaGACTGTTTATCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: GFADSQIYNLNLGFAYIPNLKAI*TVYPGV
Trigger: GACACCAGGATAAACAGTGCAAATGGCCTTGAGATT...AGGGATATAGGCAAACCCTAGGTTCAAATTATAAATCTGAGAGTCTGCAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR CCA 90 bp GGTATGGTGAGTATTGTCTCCAGTTGGAGCAAAGACTTTTCACATTTAGTCGTTGATGTTGGAGATCTTTaGTGGAACTTGTACGATCAA +
Preference number: 4 (lower is better)
Translates to: GMVSIVSSWSKDFSHLVVDVGDL*WNLYDQ
Trigger: TTGATCGTACAAGTTCCACCAAAGATCTCCAACATC...AACGACTAAATGTGAAAAGTCTTTGCTCCAACTGGAGACAATACTCACCATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
3UTR CAA 72 bp TTCATTCAAATGACTTTGTACCTTACTTTTAATCCATaGGCCTGTAGATCCACAAGGCTGCCAGGGATAATG +
Preference number: 4 (lower is better)
Translates to: FIQMTLYLTFNP*ACRSTRLPGIM
Trigger: CATTATCCCTGGCAGCCTTGTGGATCTACAGGCCAATGGATTAAAAGTAAGGTACAAAGTCATTTGAATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR CAA 72 bp AGAGGTGGGAGAGACCATGAAGTGTCCTTTGAATTCTaGACTTTCCAGATGAGAAAACTAAAAACTCAGGAA +
Preference number: 4 (lower is better)
Translates to: RGGRDHEVSFEF*TFQMRKLKTQE
Trigger: TTCCTGAGTTTTTAGTTTTCTCATCTGGAAAGTCAAGAATTCAAAGGACACTTCATGGTCTCTCCCACCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR CAA 72 bp GTTCTTGTAGGTTTTGCAGACTCTCAGATTTATAATTaGAACCTAGGGTTTGCCTATATCCCTGGAATTCCT +
Preference number: 4 (lower is better)
Translates to: VLVGFADSQIYN*NLGFAYIPGIP
Trigger: AGGAATTCCAGGGATATAGGCAAACCCTAGGTTCAAATTATAAATCTGAGAGTCTGCAAAACCTACAAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
3UTR CAA 72 bp GATATGATGTCAACCATAATGGGGAATTTACATCACTaGGGCAGACTAAGTCTCTGGAGGAGAAACATTTTT +
Preference number: 4 (lower is better)
Translates to: DMMSTIMGNLHH*GRLSLWRRNIF
Trigger: AAAAATGTTTCTCCTCCAGAGACTTAGTCTGCCCAAGTGATGTAAATTCCCCATTATGGTTGACATCATATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
CDS-3UTR GCA 90 bp TATGCATATAACACTGTTAATGAGGAGACGTCTAACCAAGAACAGGATTTATACAATCTCAAGGCCATTTaGACTGTTTATCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: YAYNTVNEETSNQEQDLYNLKAI*TVYPGV
Trigger: GACACCAGGATAAACAGTGCAAATGGCCTTGAGATT...GTATAAATCCTGTTCTTGGTTAGACGTCTCCTCATTAACAGTGTTATATGCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
3UTR CAA 72 bp TTTATGGATGCAACCCCTTCACTCCATGCTACCTATTaGTTCCAATCACTTGTTTGTATTCAGTACTTTGAT +
Preference number: 4 (lower is better)
Translates to: FMDATPSLHATY*FQSLVCIQYFD
Trigger: ATCAAAGTACTGAATACAAACAAGTGATTGGAACAAATAGGTAGCATGGAGTGAAGGGGTTGCATCCATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
CDS-3UTR CAA 90 bp CATGTGACGGCCATGAAAGGGGGAGGAATTCTGCTCCTGGCCTCCCACCCAGCCGCCTTGCACTCATATTaGCCTGACTGTTCCCTGGTG +
Preference number: 5 (lower is better)
Translates to: HVTAMKGGGILLLASHPAALHSY*PDCSLV
Trigger: CACCAGGGAACAGTCAGGCAAATATGAGTGCAAGGC...GGCTGGGTGGGAGGCCAGGAGCAGAATTCCTCCCCCTTTCATGGCCGTCACATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp TGCCCCAGTGGCCTGGCTTGGGGTATTGACTGGCCTCTATGGGCAATGGTGCCATGTTCCTCAGTGACATaGGTCACCGTCAGGGAGGAC +
Preference number: 5 (lower is better)
Translates to: CPSGLAWGIDWPLWAMVPCSSVT*VTVRED
Trigger: GTCCTCCCTGACGGTGACCAATGTCACTGAGGAACA...TGGCACCATTGCCCATAGAGGCCAGTCAATACCCCAAGCCAGGCCACTGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp GGGCTCCTCTTCCCTTGGTGGGGGAGGGGCCACCATTCAGATACCCACTTGTCTAGGACTAGGCTGGCATaGGTGACACCGAGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: GLLFPWWGRGHHSDTHLSRTRLA*VTPSLL
Trigger: CAACAAGCTCGGTGTCACCAATGCCAGCCTAGTCCT...AGACAAGTGGGTATCTGAATGGTGGCCCCTCCCCCACCAAGGGAAGAGGAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp AGGGACGCTGCCAGCAGCCACAGTGGTACGGCCAGACTGACGGATCCGTTGATTAGGACTAGGCTGGCATaGGTGACACCGAGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: RDAASSHSGTARLTDPLIRTRLA*VTPSLL
Trigger: CAACAAGCTCGGTGTCACCAATGCCAGCCTAGTCCT...AATCAACGGATCCGTCAGTCTGGCCGTACCACTGTGGCTGCTGGCAGCGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133853.3
CDS-3UTR CAA 90 bp CGCTGCCAGCAGCCACAGTGGTACGGCCAGACTGACGGATCCGTTGATTCCTCTGGTGGTGCCAATTTCTaGAATGGGGTGGGGGACTGT +
Preference number: 5 (lower is better)
Translates to: RCQQPQWYGQTDGSVDSSGGANF*NGVGDC
Trigger: ACAGTCCCCCACCCCATTCAAGAAATTGGCACCACC...AGAGGAATCAACGGATCCGTCAGTCTGGCCGTACCACTGTGGCTGCTGGCAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000133853.3
CDS-3UTR CAA 90 bp CATGTGACGGCCATGAAAGGGGGAGGAATTCTGCTCCTGGCCTCCCACCCAGCCTGTCTCACGGTGATGTaGTCCGTGCCTCGGTTAAAA +
Preference number: 5 (lower is better)
Translates to: HVTAMKGGGILLLASHPACLTVM*SVPRLK
Trigger: TTTTAACCGAGGCACGGACAACATCACCGTGAGACA...GGCTGGGTGGGAGGCCAGGAGCAGAATTCCTCCCCCTTTCATGGCCGTCACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp CAGCAACTCGTGACAGCCGCACCTCACAACTACAGTGCAGGACAGTATCTACAGGGTTCAGGGCGCCCATaGGCCATGCAGACCAGGGTT +
Preference number: 5 (lower is better)
Translates to: QQLVTAAPHNYSAGQYLQGSGRP*AMQTRV
Trigger: AACCCTGGTCTGCATGGCCAATGGGCGCCCTGAACC...CTGTAGATACTGTCCTGCACTGTAGTTGTGAGGTGCGGCTGTCACGAGTTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp TGCCCCAGTGGCCTGGCTTGGGGTATTGACTGGCCTCTATGGGCAATGGTGCCAACCTCGTTGGCAGCCTaGCACTCATATTTGCCTGAC +
Preference number: 5 (lower is better)
Translates to: CPSGLAWGIDWPLWAMVPTSLAA*HSYLPD
Trigger: GTCAGGCAAATATGAGTGCAAGGCTGCCAACGAGGT...TGGCACCATTGCCCATAGAGGCCAGTCAATACCCCAAGCCAGGCCACTGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp GACAAAGCAGGTCTGCTTAGGGTCACCTTGGGCTCCTCTTCCCTTGGTGGGGGACCTGTGGTGGCTTCGTaGCTCTTCGACTCCGTGATA +
Preference number: 5 (lower is better)
Translates to: DKAGLLRVTLGSSSLGGGPVVAS*LFDSVI
Trigger: TATCACGGAGTCGAAGAGCAACGAAGCCACCACAGG...TCCCCCACCAAGGGAAGAGGAGCCCAAGGTGACCCTAAGCAGACCTGCTTTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp GGTACGGCCAGACTGACGGATCCGTTGATTCCTCTCACCGACCCGGGTCCTGATGTTTCACCTTTTGGCTaGAAGTGCACGGTGGTGCCA +
Preference number: 5 (lower is better)
Translates to: GTARLTDPLIPLTDPGPDVSPFG*KCTVVP
Trigger: TGGCACCACCGTGCACTTCAAGCCAAAAGGTGAAAC...ATCAGGACCCGGGTCGGTGAGAGGAATCAACGGATCCGTCAGTCTGGCCGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133853.3
CDS-3UTR CAA 90 bp GCCAGACTGACGGATCCGTTGATTCCTCTCACCGACCCGGGTCCTGATGTCATTTGTTCCTCAGTGACATaGGTCACCGTCAGGGAGGAC +
Preference number: 5 (lower is better)
Translates to: ARLTDPLIPLTDPGPDVICSSVT*VTVRED
Trigger: GTCCTCCCTGACGGTGACCAATGTCACTGAGGAACA...AATGACATCAGGACCCGGGTCGGTGAGAGGAATCAACGGATCCGTCAGTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133853.3
CDS-3UTR CAA 90 bp TGCCCCAGTGGCCTGGCTTGGGGTATTGACTGGCCTCTATGGGCAATGGTGCCATACGATCAAGTAAACTaGGGAGGTCTTGGGCTCATG +
Preference number: 5 (lower is better)
Translates to: CPSGLAWGIDWPLWAMVPYDQVN*GGLGLM
Trigger: CATGAGCCCAAGACCTCCCAAGTTTACTTGATCGTA...TGGCACCATTGCCCATAGAGGCCAGTCAATACCCCAAGCCAGGCCACTGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp CAGCAACTCGTGACAGCCGCACCTCACAACTACAGTGCAGGACAGTATCTACAGGCCGAGGAGACCTCGTaGGCAGCCTTGCACTCATAT +
Preference number: 5 (lower is better)
Translates to: QQLVTAAPHNYSAGQYLQAEETS*AALHSY
Trigger: ATATGAGTGCAAGGCTGCCAACGAGGTCTCCTCGGC...CTGTAGATACTGTCCTGCACTGTAGTTGTGAGGTGCGGCTGTCACGAGTTGCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp CCACCACATGCAGAGAGGCAGCCTTCCTGTAAGATGTCCCCTAGGCCAACTCTGACATTTGAGGGAAGCTaGTCGTCCTGTGGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: PPHAERQPSCKMSPRPTLTFEGS*SSCGGF
Trigger: GAAGCCACCACAGGACGACAAGCTTCCCTCAAATGT...CAGAGTTGGCCTAGGGGACATCTTACAGGAAGGCTGCCTCTCTGCATGTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS TCA 90 bp ATGTCCAGCGAAGATGATGCCAGAGCGGTTCAACCAGGCCACTTTTaGGTTCTTGTCTTCTACCACACACCTGAGGATGGCCGTGTCCCC +
Preference number: 5 (lower is better)
Translates to: MSSEDDARAVQPGHF*VLVFYHTPEDGRVP
Trigger: GGGGACACGGCCATCCTCAGGTGTGTGGTAGAAGACAAGAACTCAAAAGTGGCCTGGTTGAACCGCTCTGGCATCATCTTCGCTGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078873.11
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp CAGCAACTCGTGACAGCCGCACCTCACAACTACAGTGCAGGACAGTATCTACAGGGGTCCAGAGACCACTaGTCATGTCCAGCGAAGATG +
Preference number: 5 (lower is better)
Translates to: QQLVTAAPHNYSAGQYLQGSRDH*SCPAKM
Trigger: CATCTTCGCTGGACATGACAAGTGGTCTCTGGACCC...CTGTAGATACTGTCCTGCACTGTAGTTGTGAGGTGCGGCTGTCACGAGTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp GGGTCTCCTACATCCACACCTTTAAAAGGACTGATCCCTTCTCTGCCAACTTTCGGTTCAGGGCGCCCATaGGCCATGCAGACCAGGGTT +
Preference number: 5 (lower is better)
Translates to: GSPTSTPLKGLIPSLPTFGSGRP*AMQTRV
Trigger: AACCCTGGTCTGCATGGCCAATGGGCGCCCTGAACC...GAAAGTTGGCAGAGAAGGGATCAGTCCTTTTAAAGGTGTGGATGTAGGAGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR CAA 90 bp GACAGCCGCACCTCACAACTACAGTGCAGGACAGTATCTACAGCACAATGGGTCGTGACCTTGACTTGTTaGACATCCGCCGAGGAGACC +
Preference number: 5 (lower is better)
Translates to: DSRTSQLQCRTVSTAQWVVTLTC*TSAEET
Trigger: GGTCTCCTCGGCGGATGTCAAACAAGTCAAGGTCAC...GACCCATTGTGCTGTAGATACTGTCCTGCACTGTAGTTGTGAGGTGCGGCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp ATCCAGGCAGGGGAGCCTGAGAAAGGCTCAACACAGGTTTCCGTTGATAGTCCAGTGACCTTGACTTGTTaGACATCCGCCGAGGAGACC +
Preference number: 5 (lower is better)
Translates to: IQAGEPEKGSTQVSVDSPVTLTC*TSAEET
Trigger: GGTCTCCTCGGCGGATGTCAAACAAGTCAAGGTCAC...TGGACTATCAACGGAAACCTGTGTTGAGCCTTTCTCAGGCTCCCCTGCCTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp AGTGAAGGGACAAAGCAGGTCTGCTTAGGGTCACCTTGGGCTCCTCTTCCCTTGCACAGTGACCTTGACTaGTTTGACATCCGCCGAGGA +
Preference number: 5 (lower is better)
Translates to: SEGTKQVCLGSPWAPLPLHSDLD*FDIRRG
Trigger: TCCTCGGCGGATGTCAAACAAGTCAAGGTCACTGTG...CAAGGGAAGAGGAGCCCAAGGTGACCCTAAGCAGACCTGCTTTGTCCCTTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp CTGACGGATCCGTTGATTCCTCTCACCGACCCGGGTCCTGATGTCATTAGCCACGTGGGTAAAACACGCTaGAAAAGGACTAGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: LTDPLIPLTDPGPDVISHVGKTR*KRTRLA
Trigger: TGCCAGCCTAGTCCTTTTCAAGCGTGTTTTACCCAC...GTGGCTAATGACATCAGGACCCGGGTCGGTGAGAGGAATCAACGGATCCGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133853.3
CDS-3UTR CAA 90 bp CGGCTCCTTTTTGCAGTGGGGCTCAGCCTTTATAAAGCTATGAAACTGATGGATGGTTCAGGGCGCCCATaGGCCATGCAGACCAGGGTT +
Preference number: 5 (lower is better)
Translates to: RLLFAVGLSLYKAMKLMDGSGRP*AMQTRV
Trigger: AACCCTGGTCTGCATGGCCAATGGGCGCCCTGAACC...ATCCATCAGTTTCATAGCTTTATAAAGGCTGAGCCCCACTGCAAAAAGGAGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp CAGCAACTCGTGACAGCCGCACCTCACAACTACAGTGCAGGACAGTATCTACAGCACAGTGACCTTGACTaGTTTGACATCCGCCGAGGA +
Preference number: 5 (lower is better)
Translates to: QQLVTAAPHNYSAGQYLQHSDLD*FDIRRG
Trigger: TCCTCGGCGGATGTCAAACAAGTCAAGGTCACTGTG...CTGTAGATACTGTCCTGCACTGTAGTTGTGAGGTGCGGCTGTCACGAGTTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp GACAGTATCTACAGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATAGACTGACGGATCCGTaGATTCCTCTCACCGACCCG +
Preference number: 5 (lower is better)
Translates to: DSIYSTMGLCTHGPFPWHRLTDP*IPLTDP
Trigger: CGGGTCGGTGAGAGGAATCAACGGATCCGTCAGTCT...ATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCTGTAGATACTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp GGGTCTCCTACATCCACACCTTTAAAAGGACTGATCCCTTCTCTGCCAACTTTCGGGTCCAGAGACCACTaGTCATGTCCAGCGAAGATG +
Preference number: 5 (lower is better)
Translates to: GSPTSTPLKGLIPSLPTFGSRDH*SCPAKM
Trigger: CATCTTCGCTGGACATGACAAGTGGTCTCTGGACCC...GAAAGTTGGCAGAGAAGGGATCAGTCCTTTTAAAGGTGTGGATGTAGGAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR CAA 90 bp GCAGGACAGTATCTACAGCACAATGGGTCTATGTACACATGGACCATTCCCCTGACCTCGTTGGCAGCCTaGCACTCATATTTGCCTGAC +
Preference number: 5 (lower is better)
Translates to: AGQYLQHNGSMYTWTIPLTSLAA*HSYLPD
Trigger: GTCAGGCAAATATGAGTGCAAGGCTGCCAACGAGGT...CAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCTGTAGATACTGTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp AGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATGCTTTAGAGAAAGCCGAGGAGACCTCGTaGGCAGCCTTGCACTCATAT +
Preference number: 5 (lower is better)
Translates to: STMGLCTHGPFPWHALEKAEETS*AALHSY
Trigger: ATATGAGTGCAAGGCTGCCAACGAGGTCTCCTCGGC...TTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp TTCGCGTCTTACATACTATCATCTTCCCATGACCCACTCAGCATCCTCTGTCTCCCTGTGGTGGCTTCGTaGCTCTTCGACTCCGTGATA +
Preference number: 5 (lower is better)
Translates to: FASYILSSSHDPLSILCLPVVAS*LFDSVI
Trigger: TATCACGGAGTCGAAGAGCAACGAAGCCACCACAGG...GAGACAGAGGATGCTGAGTGGGTCATGGGAAGATGATAGTATGTAAGACGCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR CAA 90 bp AGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATGCTTTAGAGAAAAGACTGACGGATCCGTaGATTCCTCTCACCGACCCG +
Preference number: 5 (lower is better)
Translates to: STMGLCTHGPFPWHALEKRLTDP*IPLTDP
Trigger: CGGGTCGGTGAGAGGAATCAACGGATCCGTCAGTCT...TTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp CCACCACATGCAGAGAGGCAGCCTTCCTGTAAGATGTCCCCTAGGCCAACTCTGGATCTTTGGTGGAACTaGTACGATCAAGTAAACTTG +
Preference number: 5 (lower is better)
Translates to: PPHAERQPSCKMSPRPTLDLWWN*YDQVNL
Trigger: CAAGTTTACTTGATCGTACAAGTTCCACCAAAGATC...CAGAGTTGGCCTAGGGGACATCTTACAGGAAGGCTGCCTCTCTGCATGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp GGGTCTCCTACATCCACACCTTTAAAAGGACTGATCCCTTCTCTGCCAACTTTCGCCTTGCACTCATATTaGCCTGACTGTTCCCTGGTG +
Preference number: 5 (lower is better)
Translates to: GSPTSTPLKGLIPSLPTFALHSY*PDCSLV
Trigger: CACCAGGGAACAGTCAGGCAAATATGAGTGCAAGGC...GAAAGTTGGCAGAGAAGGGATCAGTCCTTTTAAAGGTGTGGATGTAGGAGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR CAA 90 bp ATCCCTTCTCTGCCAACTTTCAGGGTCTTCTCTGATCTTCAGAAATGCTCCCTTGTGACCTTGACTTGTTaGACATCCGCCGAGGAGACC +
Preference number: 5 (lower is better)
Translates to: IPSLPTFRVFSDLQKCSLVTLTC*TSAEET
Trigger: GGTCTCCTCGGCGGATGTCAAACAAGTCAAGGTCAC...AAGGGAGCATTTCTGAAGATCAGAGAAGACCCTGAAAGTTGGCAGAGAAGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR CAA 90 bp AGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATGCTTTAGAGAAACCTGTGGTGGCTTCGTaGCTCTTCGACTCCGTGATA +
Preference number: 5 (lower is better)
Translates to: STMGLCTHGPFPWHALEKPVVAS*LFDSVI
Trigger: TATCACGGAGTCGAAGAGCAACGAAGCCACCACAGG...TTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp CCCTGTCTGCTCACCCCATTGATAGTAGGCACTTTCATGTACAGTGATATTCTGAGGACTAGGCTGGCATaGGTGACACCGAGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: PCLLTPLIVGTFMYSDILRTRLA*VTPSLL
Trigger: CAACAAGCTCGGTGTCACCAATGCCAGCCTAGTCCT...CAGAATATCACTGTACATGAAAGTGCCTACTATCAATGGGGTGAGCAGACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp CACAACTACAGTGCAGGACAGTATCTACAGCACAATGGGTCTATGTACACATGGGCCTTGCACTCATATTaGCCTGACTGTTCCCTGGTG +
Preference number: 5 (lower is better)
Translates to: HNYSAGQYLQHNGSMYTWALHSY*PDCSLV
Trigger: CACCAGGGAACAGTCAGGCAAATATGAGTGCAAGGC...CCATGTGTACATAGACCCATTGTGCTGTAGATACTGTCCTGCACTGTAGTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp CTACCTGACCAACAAGGTTGTGGGATTACAGATATTACTGAGCCTGTTGCCCATCACAGTGACCTTGACTaGTTTGACATCCGCCGAGGA +
Preference number: 5 (lower is better)
Translates to: LPDQQGCGITDITEPVAHHSDLD*FDIRRG
Trigger: TCCTCGGCGGATGTCAAACAAGTCAAGGTCACTGTG...ATGGGCAACAGGCTCAGTAATATCTGTAATCCCACAACCTTGTTGGTCAGGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR CAA 90 bp ATCCCTTCTCTGCCAACTTTCAGGGTCTTCTCTGATCTTCAGAAATGCTCCCTTACATTTGAGGGAAGCTaGTCGTCCTGTGGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: IPSLPTFRVFSDLQKCSLTFEGS*SSCGGF
Trigger: GAAGCCACCACAGGACGACAAGCTTCCCTCAAATGT...AAGGGAGCATTTCTGAAGATCAGAGAAGACCCTGAAAGTTGGCAGAGAAGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR CAA 90 bp AGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATGCTTTAGAGAAAACATTTGAGGGAAGCTaGTCGTCCTGTGGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: STMGLCTHGPFPWHALEKTFEGS*SSCGGF
Trigger: GAAGCCACCACAGGACGACAAGCTTCCCTCAAATGT...TTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp AGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATGCTTTAGAGAAAGCTGAGGCTTCACATTaGAGGGAAGCTTGTCGTCCT +
Preference number: 5 (lower is better)
Translates to: STMGLCTHGPFPWHALEKAEASH*REACRP
Trigger: AGGACGACAAGCTTCCCTCAAATGTGAAGCCTCAGC...TTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp CCTTTAAAAGGACTGATCCCTTCTCTGCCAACTTTCAGGGTCTTCTCTGATCTTTGTTCCTCAGTGACATaGGTCACCGTCAGGGAGGAC +
Preference number: 5 (lower is better)
Translates to: PLKGLIPSLPTFRVFSDLCSSVT*VTVRED
Trigger: GTCCTCCCTGACGGTGACCAATGTCACTGAGGAACA...AAGATCAGAGAAGACCCTGAAAGTTGGCAGAGAAGGGATCAGTCCTTTTAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR CAA 90 bp TTCATGTACAGTGATATTCTGAGTGACTCCCAGCTGGGTTCTGAAAATGAGACCTGTTCCTCAGTGACATaGGTCACCGTCAGGGAGGAC +
Preference number: 5 (lower is better)
Translates to: FMYSDILSDSQLGSENETCSSVT*VTVRED
Trigger: GTCCTCCCTGACGGTGACCAATGTCACTGAGGAACA...GGTCTCATTTTCAGAACCCAGCTGGGAGTCACTCAGAATATCACTGTACATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS TCA 90 bp CCTCGTTGGCAGCCTTGCACTCATATTTGCCTGACTGTTCCCTGGTaGTGCCTAGGATCTCCAGATATTCTTCTTCTCCTTCAAATTCTC +
Preference number: 5 (lower is better)
Translates to: PRWQPCTHICLTVPW*CLGSPDILLLLQIL
Trigger: GAGAATTTGAAGGAGAAGAAGAATATCTGGAGATCCTAGGCATCACCAGGGAACAGTCAGGCAAATATGAGTGCAAGGCTGCCAACGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078873.11
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp TTCGCGTCTTACATACTATCATCTTCCCATGACCCACTCAGCATCCTCTGTCTCGCCACTTTTGAGTTCTaGTCTTCTACCACACACCTG +
Preference number: 5 (lower is better)
Translates to: FASYILSSSHDPLSILCLATFEF*SSTTHL
Trigger: CAGGTGTGTGGTAGAAGACAAGAACTCAAAAGTGGC...GAGACAGAGGATGCTGAGTGGGTCATGGGAAGATGATAGTATGTAAGACGCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR CAA 90 bp TATAATAGGATGGGGACCCTGAAGGCCAGGTGCATTATCAAAGCTTATGATATGGGGTCCAGAGACCACTaGTCATGTCCAGCGAAGATG +
Preference number: 5 (lower is better)
Translates to: YNRMGTLKARCIIKAYDMGSRDH*SCPAKM
Trigger: CATCTTCGCTGGACATGACAAGTGGTCTCTGGACCC...CATATCATAAGCTTTGATAATGCACCTGGCCTTCAGGGTCCCCATCCTATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
CDS-3UTR CAA 90 bp TTCCTGGTTTATGGATGCAACCCCTTCACTCCATGCTACCTATTTGTTCCAATCGCTGAGGCTTCACATTaGAGGGAAGCTTGTCGTCCT +
Preference number: 5 (lower is better)
Translates to: FLVYGCNPFTPCYLFVPIAEASH*REACRP
Trigger: AGGACGACAAGCTTCCCTCAAATGTGAAGCCTCAGC...GATTGGAACAAATAGGTAGCATGGAGTGAAGGGGTTGCATCCATAAACCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
CDS TCA 90 bp GATCAAGTAAACTTGGGAGGTCTTGGGCTCATGCTGTGTCTGAACTaGGCATGTGTAGGATCCTTCATCATAGACATCCACCTTCTGGAT +
Preference number: 5 (lower is better)
Translates to: DQVNLGGLGLMLCLN*ACVGSFIIDIHLLD
Trigger: ATCCAGAAGGTGGATGTCTATGATGAAGGATCCTACACATGCTCAGTTCAGACACAGCATGAGCCCAAGACCTCCCAAGTTTACTTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078873.11
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp AGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATGCTTTAGAGAAATACGATCAAGTAAACTaGGGAGGTCTTGGGCTCATG +
Preference number: 5 (lower is better)
Translates to: STMGLCTHGPFPWHALEKYDQVN*GGLGLM
Trigger: CATGAGCCCAAGACCTCCCAAGTTTACTTGATCGTA...TTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp CTACCTGACCAACAAGGTTGTGGGATTACAGATATTACTGAGCCTGTTGCCCATACATCCGAGGAGATGTaGGAGATCTTTGGTGGAACT +
Preference number: 5 (lower is better)
Translates to: LPDQQGCGITDITEPVAHTSEEM*EIFGGT
Trigger: AGTTCCACCAAAGATCTCCAACATCTCCTCGGATGT...ATGGGCAACAGGCTCAGTAATATCTGTAATCCCACAACCTTGTTGGTCAGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS CCA 90 bp AGATCTTTGGTGGAACTTGTACGATCAAGTAAACTTGGGAGGTCTTaGGCTCATGCTGTGTCTGAACTGAGCATGTGTAGGATCCTTCAT +
Preference number: 5 (lower is better)
Translates to: RSLVELVRSSKLGRS*AHAVSELSMCRILH
Trigger: ATGAAGGATCCTACACATGCTCAGTTCAGACACAGCATGAGCCCAAGACCTCCCAAGTTTACTTGATCGTACAAGTTCCACCAAAGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078873.11
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp GAAGCCCATAAAGCGTTGGCCTTGAACTCAAGGATAAGAATCCATAAAGGAGAATGTCTCACGGTGATGTaGTCCGTGCCTCGGTTAAAA +
Preference number: 5 (lower is better)
Translates to: EAHKALALNSRIRIHKGECLTVM*SVPRLK
Trigger: TTTTAACCGAGGCACGGACAACATCACCGTGAGACA...TTCTCCTTTATGGATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATGGGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp TTCATGTACAGTGATATTCTGAGTGACTCCCAGCTGGGTTCTGAAAATGAGACCGCCACTTTTGAGTTCTaGTCTTCTACCACACACCTG +
Preference number: 5 (lower is better)
Translates to: FMYSDILSDSQLGSENETATFEF*SSTTHL
Trigger: CAGGTGTGTGGTAGAAGACAAGAACTCAAAAGTGGC...GGTCTCATTTTCAGAACCCAGCTGGGAGTCACTCAGAATATCACTGTACATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp CCTTTAAAAGGACTGATCCCTTCTCTGCCAACTTTCAGGGTCTTCTCTGATCTTTACGATCAAGTAAACTaGGGAGGTCTTGGGCTCATG +
Preference number: 5 (lower is better)
Translates to: PLKGLIPSLPTFRVFSDLYDQVN*GGLGLM
Trigger: CATGAGCCCAAGACCTCCCAAGTTTACTTGATCGTA...AAGATCAGAGAAGACCCTGAAAGTTGGCAGAGAAGGGATCAGTCCTTTTAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR CAA 90 bp AAACATTCTGTCTACCCTTCCTCTTGTGCTAGGAGAAACATTTTCCTTTTCCAGACCTCGTTGGCAGCCTaGCACTCATATTTGCCTGAC +
Preference number: 5 (lower is better)
Translates to: KHSVYPSSCARRNIFLFQTSLAA*HSYLPD
Trigger: GTCAGGCAAATATGAGTGCAAGGCTGCCAACGAGGT...CTGGAAAAGGAAAATGTTTCTCCTAGCACAAGAGGAAGGGTAGACAGAATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR CAA 90 bp GGTATGGTGAGTATTGTCTCCAGTTGGAGCAAAGACTTTTCACATTTAGTCGTTGCTGAGGCTTCACATTaGAGGGAAGCTTGTCGTCCT +
Preference number: 5 (lower is better)
Translates to: GMVSIVSSWSKDFSHLVVAEASH*REACRP
Trigger: AGGACGACAAGCTTCCCTCAAATGTGAAGCCTCAGC...AACGACTAAATGTGAAAAGTCTTTGCTCCAACTGGAGACAATACTCACCATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR CAA 90 bp GGTTTTGCAGACTCTCAGATTTATAATTTGAACCTAGGGTTTGCCTATATCCCTAGGACTAGGCTGGCATaGGTGACACCGAGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: GFADSQIYNLNLGFAYIPRTRLA*VTPSLL
Trigger: CAACAAGCTCGGTGTCACCAATGCCAGCCTAGTCCT...AGGGATATAGGCAAACCCTAGGTTCAAATTATAAATCTGAGAGTCTGCAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR CAA 90 bp CAAGGGTATGGTGAGTATTGTCTCCAGTTGGAGCAAAGACTTTTCACATTTAGTTGTCTCACGGTGATGTaGTCCGTGCCTCGGTTAAAA +
Preference number: 5 (lower is better)
Translates to: QGYGEYCLQLEQRLFTFSCLTVM*SVPRLK
Trigger: TTTTAACCGAGGCACGGACAACATCACCGTGAGACA...ACTAAATGTGAAAAGTCTTTGCTCCAACTGGAGACAATACTCACCATACCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR CAA 90 bp GAAGCCCATAAAGCGTTGGCCTTGAACTCAAGGATAAGAATCCATAAAGGAGAAACATCCGAGGAGATGTaGGAGATCTTTGGTGGAACT +
Preference number: 5 (lower is better)
Translates to: EAHKALALNSRIRIHKGETSEEM*EIFGGT
Trigger: AGTTCCACCAAAGATCTCCAACATCTCCTCGGATGT...TTCTCCTTTATGGATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATGGGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS-3UTR CAA 90 bp AATAGTTCTTCTATTTGTAAATATTGCTGTTTGTGGAGACTGACCATCTCCACTGCCGAGGAGACCTCGTaGGCAGCCTTGCACTCATAT +
Preference number: 5 (lower is better)
Translates to: NSSSICKYCCLWRLTISTAEETS*AALHSY
Trigger: ATATGAGTGCAAGGCTGCCAACGAGGTCTCCTCGGC...AGTGGAGATGGTCAGTCTCCACAAACAGCAATATTTACAAATAGAAGAACTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS GCA 90 bp GGATGGCGGATAGATTTCAAGTCAATATGCAGGAACTCTATGACTTaGATGGAATCAGGCTCGGTTTTGGCATACTTACTGAAAAGGACT +
Preference number: 5 (lower is better)
Translates to: GWRIDFKSICRNSMT*MESGSVLAYLLKRT
Trigger: AGTCCTTTTCAGTAAGTATGCCAAAACCGAGCCTGATTCCATGCAAGTCATAGAGTTCCTGCATATTGACTTGAAATCTATCCGCCATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR CAA 90 bp TCTGTCTCTCAGGGACATTTGAATCTAGAATTATATCTACCTGACCAACAAGGTCAGGAACTCTATGACTaGCATGGAATCAGGCTCGGT +
Preference number: 5 (lower is better)
Translates to: SVSQGHLNLELYLPDQQGQELYD*HGIRLG
Trigger: ACCGAGCCTGATTCCATGCAAGTCATAGAGTTCCTG...ACCTTGTTGGTCAGGTAGATATAATTCTAGATTCAAATGTCCCTGAGAGACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR CAA 90 bp TCCATTTCCTGGCCCTTACATTACCCCAGTTTCTTAAAGAGGCCACCACAAAAAGATCTTTGGTGGAACTaGTACGATCAAGTAAACTTG +
Preference number: 5 (lower is better)
Translates to: SISWPLHYPSFLKRPPQKDLWWN*YDQVNL
Trigger: CAAGTTTACTTGATCGTACAAGTTCCACCAAAGATC...TTTTTGTGGTGGCCTCTTTAAGAAACTGGGGTAATGTAAGGGCCAGGAAATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR CAA 90 bp TATAATAGGATGGGGACCCTGAAGGCCAGGTGCATTATCAAAGCTTATGATATGGATCTTTGGTGGAACTaGTACGATCAAGTAAACTTG +
Preference number: 5 (lower is better)
Translates to: YNRMGTLKARCIIKAYDMDLWWN*YDQVNL
Trigger: CAAGTTTACTTGATCGTACAAGTTCCACCAAAGATC...CATATCATAAGCTTTGATAATGCACCTGGCCTTCAGGGTCCCCATCCTATTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
CDS-3UTR CAA 90 bp ACGATTCTACCTCTGCTGCAAATGGTGAATCAGCAATGTAAACTTACTGTCATAGAATCAGGCTCGGTTTaGGCATACTTACTGAAAAGG +
Preference number: 5 (lower is better)
Translates to: TILPLLQMVNQQCKLTVIESGSV*AYLLKR
Trigger: CCTTTTCAGTAAGTATGCCAAAACCGAGCCTGATTC...TATGACAGTAAGTTTACATTGCTGATTCACCATTTGCAGCAGAGGTAGAATCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS-3UTR CAA 90 bp TATGCATATAACACTGTTAATGAGGAGACGTCTAACCAAGAACAGGATTTATACACATCCGAGGAGATGTaGGAGATCTTTGGTGGAACT +
Preference number: 5 (lower is better)
Translates to: YAYNTVNEETSNQEQDLYTSEEM*EIFGGT
Trigger: AGTTCCACCAAAGATCTCCAACATCTCCTCGGATGT...GTATAAATCCTGTTCTTGGTTAGACGTCTCCTCATTAACAGTGTTATATGCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099761.10
CDS CAA 90 bp GACGCTGCCAGCAGCCACAGTGGTACGGCCAGACTGACGGATCCGTaGATTCCTCTCACCGACCCGGGTCTGAAAAGGACTAGGCTGGCA +
Preference number: 6 (lower is better)
Translates to: DAASSHSGTARLTDP*IPLTDPGLKRTRLA
Trigger: TGCCAGCCTAGTCCTTTTCAGACCCGGGTCGGTGAGAGGAATCAACGGATCCGTCAGTCTGGCCGTACCACTGTGGCTGCTGGCAGCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS CAA 90 bp GACGCTGCCAGCAGCCACAGTGGTACGGCCAGACTGACGGATCCGTaGATTCCTCTCACCGACCCGGGTCCTTTTGGCTTGAAGTGCACG +
Preference number: 6 (lower is better)
Translates to: DAASSHSGTARLTDP*IPLTDPGPFGLKCT
Trigger: CGTGCACTTCAAGCCAAAAGGACCCGGGTCGGTGAGAGGAATCAACGGATCCGTCAGTCTGGCCGTACCACTGTGGCTGCTGGCAGCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145951.8
CDS CAA 72 bp AGCAGCCACAGTGGTACGGCCAGACTGACGGATCCGTaGATTCCTCTCACCGACCCGGGTCCTTTTGGCTTG +
Preference number: 6 (lower is better)
Translates to: SSHSGTARLTDP*IPLTDPGPFGL
Trigger: CAAGCCAAAAGGACCCGGGTCGGTGAGAGGAATCAACGGATCCGTCAGTCTGGCCGTACCACTGTGGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145951.8
CDS CAA 90 bp AGAGCATGGCGCTTCTCCAGCTCAACCCGAGGGTCCAGAGACCACTaGTCATGTCCAGCGAAGATGATGCCAGAGCGGTTCAACCAGGCC +
Preference number: 6 (lower is better)
Translates to: RAWRFSSSTRGSRDH*SCPAKMMPERFNQA
Trigger: GGCCTGGTTGAACCGCTCTGGCATCATCTTCGCTGGACATGACAAGTGGTCTCTGGACCCTCGGGTTGAGCTGGAGAAGCGCCATGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078873.11
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS CCA 72 bp TCCACCTTCTGGATTCGGAGGCTGTATTCCAGAGCATaGCGCTTCTCCAGCTCAACCCGAGGGTCCAGAGAC +
Preference number: 6 (lower is better)
Translates to: STFWIRRLYSRA*RFSSSTRGSRD
Trigger: GTCTCTGGACCCTCGGGTTGAGCTGGAGAAGCGCCATGCTCTGGAATACAGCCTCCGAATCCAGAAGGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078873.11
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS CAA 72 bp CGCTTCTCCAGCTCAACCCGAGGGTCCAGAGACCACTaGTCATGTCCAGCGAAGATGATGCCAGAGCGGTTC +
Preference number: 6 (lower is better)
Translates to: RFSSSTRGSRDH*SCPAKMMPERF
Trigger: GAACCGCTCTGGCATCATCTTCGCTGGACATGACAAGTGGTCTCTGGACCCTCGGGTTGAGCTGGAGAAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078873.11
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS CAA 72 bp AGCAGCCACAGTGGTACGGCCAGACTGACGGATCCGTaGATTCCTCTCACCGACCCGGGTCTGAAAAGGACT +
Preference number: 6 (lower is better)
Translates to: SSHSGTARLTDP*IPLTDPGLKRT
Trigger: AGTCCTTTTCAGACCCGGGTCGGTGAGAGGAATCAACGGATCCGTCAGTCTGGCCGTACCACTGTGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS CAA 90 bp CTTCGACTCCGTGATAGTGGGTGGATAGTTCACAGTGACCTTGACTaGTTTGACATCCGCCGAGGAGACCTCGTTGGCAGCCTTGCACTC +
Preference number: 6 (lower is better)
Translates to: LRLRDSGWIVHSDLD*FDIRRGDLVGSLAL
Trigger: GAGTGCAAGGCTGCCAACGAGGTCTCCTCGGCGGATGTCAAACAAGTCAAGGTCACTGTGAACTATCCACCCACTATCACGGAGTCGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078873.11
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS CAA 72 bp ATGCCAGAGCGGTTCAACCAGGCCACTTTTGAGTTCTaGTCTTCTACCACACACCTGAGGATGGCCGTGTCC +
Preference number: 6 (lower is better)
Translates to: MPERFNQATFEF*SSTTHLRMAVS
Trigger: GGACACGGCCATCCTCAGGTGTGTGGTAGAAGACAAGAACTCAAAAGTGGCCTGGTTGAACCGCTCTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078873.11
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS CAA 72 bp CGTGATAGTGGGTGGATAGTTCACAGTGACCTTGACTaGTTTGACATCCGCCGAGGAGACCTCGTTGGCAGC +
Preference number: 6 (lower is better)
Translates to: RDSGWIVHSDLD*FDIRRGDLVGS
Trigger: GCTGCCAACGAGGTCTCCTCGGCGGATGTCAAACAAGTCAAGGTCACTGTGAACTATCCACCCACTATCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078873.11
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS CAA 72 bp ACCTTGACTTGTTTGACATCCGCCGAGGAGACCTCGTaGGCAGCCTTGCACTCATATTTGCCTGACTGTTCC +
Preference number: 6 (lower is better)
Translates to: TLTCLTSAEETS*AALHSYLPDCS
Trigger: GGAACAGTCAGGCAAATATGAGTGCAAGGCTGCCAACGAGGTCTCCTCGGCGGATGTCAAACAAGTCAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078873.11
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS TCA 72 bp GAAGATGATGCCAGAGCGGTTCAACCAGGCCACTTTTaGGTTCTTGTCTTCTACCACACACCTGAGGATGGC +
Preference number: 6 (lower is better)
Translates to: EDDARAVQPGHF*VLVFYHTPEDG
Trigger: GCCATCCTCAGGTGTGTGGTAGAAGACAAGAACTCAAAAGTGGCCTGGTTGAACCGCTCTGGCATCATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078873.11
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS TCA 72 bp AACTTGGGAGGTCTTGGGCTCATGCTGTGTCTGAACTaGGCATGTGTAGGATCCTTCATCATAGACATCCAC +
Preference number: 6 (lower is better)
Translates to: NLGGLGLMLCLN*ACVGSFIIDIH
Trigger: GTGGATGTCTATGATGAAGGATCCTACACATGCTCAGTTCAGACACAGCATGAGCCCAAGACCTCCCAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078873.11
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS CCA 72 bp GTGGAACTTGTACGATCAAGTAAACTTGGGAGGTCTTaGGCTCATGCTGTGTCTGAACTGAGCATGTGTAGG +
Preference number: 6 (lower is better)
Translates to: VELVRSSKLGRS*AHAVSELSMCR
Trigger: CCTACACATGCTCAGTTCAGACACAGCATGAGCCCAAGACCTCCCAAGTTTACTTGATCGTACAAGTTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078873.11
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS CAA 90 bp TCAATATGCAGGAACTCTATGACTTGCATGGAATCAGGCTCGGTTTaGGCATACTTACTGAAAAGGACTAGGCTGGCATTGGTGACACCG +
Preference number: 6 (lower is better)
Translates to: SICRNSMTCMESGSV*AYLLKRTRLALVTP
Trigger: CGGTGTCACCAATGCCAGCCTAGTCCTTTTCAGTAAGTATGCCAAAACCGAGCCTGATTCCATGCAAGTCATAGAGTTCCTGCATATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS TCA 72 bp CAGCCTTGCACTCATATTTGCCTGACTGTTCCCTGGTaGTGCCTAGGATCTCCAGATATTCTTCTTCTCCTT +
Preference number: 6 (lower is better)
Translates to: QPCTHICLTVPW*CLGSPDILLLL
Trigger: AAGGAGAAGAAGAATATCTGGAGATCCTAGGCATCACCAGGGAACAGTCAGGCAAATATGAGTGCAAGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078873.11
ENSMUST00000099761.10
ENSMUST00000187695.7
CDS CAA 72 bp AGGAACTCTATGACTTGCATGGAATCAGGCTCGGTTTaGGCATACTTACTGAAAAGGACTAGGCTGGCATTG +
Preference number: 6 (lower is better)
Translates to: RNSMTCMESGSV*AYLLKRTRLAL
Trigger: CAATGCCAGCCTAGTCCTTTTCAGTAAGTATGCCAAAACCGAGCCTGATTCCATGCAAGTCATAGAGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS CAA 90 bp GGGATGGCGGATAGATTTCAAGTCAATATGCAGGAACTCTATGACTaGCATGGAATCAGGCTCGGTTTTGGCATACTTACTGAAAAGGAC +
Preference number: 6 (lower is better)
Translates to: GMADRFQVNMQELYD*HGIRLGFGILTEKD
Trigger: GTCCTTTTCAGTAAGTATGCCAAAACCGAGCCTGATTCCATGCAAGTCATAGAGTTCCTGCATATTGACTTGAAATCTATCCGCCATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS GCA 72 bp ACCTTTAAGGGATGGCGGATAGATTTCAAGTCAATATaGAGGAACTCTATGACTTGCATGGAATCAGGCTCG +
Preference number: 6 (lower is better)
Translates to: TFKGWRIDFKSI*RNSMTCMESGS
Trigger: CGAGCCTGATTCCATGCAAGTCATAGAGTTCCTGCATATTGACTTGAAATCTATCCGCCATCCCTTAAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078873.11
CDS CCA 72 bp ATTGTGATTGGAGACAAATTTACTTCAGCAGGAGGCTaGTTCCAAAATGCCAAGACTTGCAATGAGAAGAGG +
Preference number: 6 (lower is better)
Translates to: IVIGDKFTSAGG*FQNAKTCNEKR
Trigger: CCTCTTCTCATTGCAAGTCTTGGCATTTTGGAACCAGCCTCCTGCTGAAGTAAATTTGTCTCCAATCACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187695.7