Pregenerated sensors for LSAMP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061080Ensembl transcript IDs: ENSMUST00000078873.11, ENSMUST00000099761.10, ENSMUST00000133853.3, ENSMUST00000145951.8, ENSMUST00000187695.7
Found 347 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | ACGAGCACCATCCAAAAAGCTGTGCCTAGGAAGGATCGATGGGACTaGGGAGGTGTTGGGTGGGCGGGTCTCTCTCCCCTTACAGAGTGT | + |
Preference number: 1 (lower is better) Translates to: TSTIQKAVPRKDRWD*GGVGWAGLSPLTEC Trigger: ACACTCTGTAAGGGGAGAGAGACCCGCCCACCCAACACCTCCCCAGTCCCATCGATCCTTCCTAGGCACAGCTTTTTGGATGGTGCTCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR GCA 90 bp | CCAGGCCCAGGAGTCCCTGCTATCCTAGTCCTCTTTCTTTCCGTTTaGCTAGGGTTGGTTGGGTCAGGCTGGAGAATCTCCACTGAGGGA | + |
Preference number: 1 (lower is better) Translates to: PGPGVPAILVLFLSV*LGLVGSGWRISTEG Trigger: TCCCTCAGTGGAGATTCTCCAGCCTGACCCAACCAACCCTAGGCAAACGGAAAGAAAGAGGACTAGGATAGCAGGGACTCCTGGGCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR CCA 90 bp | TTGAAGATTAGTGAAGGGACAAAGCAGGTCTGCTTAGGGTCACCTTaGGCTCCTCTTCCCTTGGTGGGGGAGGGGCCACCATTCAGATAC | + |
Preference number: 1 (lower is better) Translates to: LKISEGTKQVCLGSP*APLPLVGEGPPFRY Trigger: GTATCTGAATGGTGGCCCCTCCCCCACCAAGGGAAGAGGAGCCCAAGGTGACCCTAAGCAGACCTGCTTTGTCCCTTCACTAATCTTCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR TCA 90 bp | TTCCGTTTGCCTAGGGTTGGTTGGGTCAGGCTGGAGAATCTCCACTaGGGGAGAAGGAGCAAAGAAAGCCAGCTGACCTTGGCTAGAAGA | + |
Preference number: 1 (lower is better) Translates to: FRLPRVGWVRLENLH*GRRSKESQLTLARR Trigger: TCTTCTAGCCAAGGTCAGCTGGCTTTCTTTGCTCCTTCTCCCTCAGTGGAGATTCTCCAGCCTGACCCAACCAACCCTAGGCAAACGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR CCA 90 bp | CAGAGAGGCAGCCTTCCTGTAAGATGTCCCCTAGGCCAACTCTGTTaGCGATGTGATGATGTCGGGCTTTGGAATGCTCATACTGCTGCT | + |
Preference number: 1 (lower is better) Translates to: QRGSLPVRCPLGQLC*RCDDVGLWNAHTAA Trigger: AGCAGCAGTATGAGCATTCCAAAGCCCGACATCATCACATCGCCAACAGAGTTGGCCTAGGGGACATCTTACAGGAAGGCTGCCTCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR TCA 90 bp | GGCTGGAGAATCTCCACTGAGGGAGAAGGAGCAAAGAAAGCCAGCTaGCCTTGGCTAGAAGAGCGTCTAAGTGTTCTGAGTGTCTGCTTC | + |
Preference number: 1 (lower is better) Translates to: GWRISTEGEGAKKAS*PWLEERLSVLSVCF Trigger: GAAGCAGACACTCAGAACACTTAGACGCTCTTCTAGCCAAGGTCAGCTGGCTTTCTTTGCTCCTTCTCCCTCAGTGGAGATTCTCCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR CCA 90 bp | GACGGGTGGCGAGGGTTGCTGTGGTACGCCAGGAAGCTAGCTCCGTaGATTTTCTTCAATTGCAAGAAGCAGATTTTTACCGTGCCTAGA | + |
Preference number: 1 (lower is better) Translates to: DGWRGLLWYARKLAP*IFFNCKKQIFTVPR Trigger: TCTAGGCACGGTAAAAATCTGCTTCTTGCAATTGAAGAAAATCCACGGAGCTAGCTTCCTGGCGTACCACAGCAACCCTCGCCACCCGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR CCA 90 bp | TACAGTGCAGGACAGTATCTACAGCACAATGGGTCTATGTACACATaGACCATTCCCCTGGCATGCTTTAGAGAAAGACACATACACGCT | + |
Preference number: 1 (lower is better) Translates to: YSAGQYLQHNGSMYT*TIPLACFRERHIHA Trigger: AGCGTGTATGTGTCTTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCTGTAGATACTGTCCTGCACTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR CCA 90 bp | CCTTGGCTAGAAGAGCGTCTAAGTGTTCTGAGTGTCTGCTTCCTTTaGCTAAGGCAACACATTTGTAACCATGTCAGGCTTGCTTCTAAG | + |
Preference number: 1 (lower is better) Translates to: PWLEERLSVLSVCFL*LRQHICNHVRLASK Trigger: CTTAGAAGCAAGCCTGACATGGTTACAAATGTGTTGCCTTAGCCAAAGGAAGCAGACACTCAGAACACTTAGACGCTCTTCTAGCCAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR TCA 90 bp | GCCAATAAAAGATGTCACATGGTAGTCATCTCAGAGAGGACCCTGTaGCTGTGGGCTGAGAAGAAAGGACTTAAAAAGCAGTTTCACGCT | + |
Preference number: 1 (lower is better) Translates to: ANKRCHMVVISERTL*LWAEKKGLKKQFHA Trigger: AGCGTGAAACTGCTTTTTAAGTCCTTTCTTCTCAGCCCACAGTCACAGGGTCCTCTCTGAGATGACTACCATGTGACATCTTTTATTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR GCA 90 bp | ATCCCTTCTCTGCCAACTTTCAGGGTCTTCTCTGATCTTCAGAAATaGTCCCTTTCCTACGATTCTACCTCTGCTGCAAATGGTGAATCA | + |
Preference number: 1 (lower is better) Translates to: IPSLPTFRVFSDLQK*SLSYDSTSAANGES Trigger: TGATTCACCATTTGCAGCAGAGGTAGAATCGTAGGAAAGGGAGCATTTCTGAAGATCAGAGAAGACCCTGAAAGTTGGCAGAGAAGGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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3UTR TCA 90 bp | GTATTACTAGCTACCCTCTTGGATAGGAATCCCCATCCTATCTCTTaGTCATCCATAAATACTTTTCTGCATCCTGAACCCTGTCTGTCC | + |
Preference number: 1 (lower is better) Translates to: VLLATLLDRNPHPIS*SSINTFLHPEPCLS Trigger: GGACAGACAGGGTTCAGGATGCAGAAAAGTATTTATGGATGATCAAGAGATAGGATGGGGATTCCTATCCAAGAGGGTAGCTAGTAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR CCA 90 bp | ACTTTGTATGCAAAGGATATGGAATCCGTGAGTGTTCCTGGTTTATaGATGCAACCCCTTCACTCCATGCTACCTATTTGTTCCAATCAC | + |
Preference number: 1 (lower is better) Translates to: TLYAKDMESVSVPGL*MQPLHSMLPICSNH Trigger: GTGATTGGAACAAATAGGTAGCATGGAGTGAAGGGGTTGCATCCATAAACCAGGAACACTCACGGATTCCATATCCTTTGCATACAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR GCA 90 bp | CTCAGCAATAACCCTTCATCCTTTCTCAAGGTGAATCACTTTGGATaGTTCTATACAGTTTTAAGGGAAAGTAGCCACTGGTTTTCTAGC | + |
Preference number: 1 (lower is better) Translates to: LSNNPSSFLKVNHFG*FYTVLRESSHWFSS Trigger: GCTAGAAAACCAGTGGCTACTTTCCCTTAAAACTGTATAGAAGCATCCAAAGTGATTCACCTTGAGAAAGGATGAAGGGTTATTGCTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR CCA 90 bp | TTACATTTCCCAATATTACGAACAAGGCAGCCACCTCAGCTATTTTaGTGCCCTCGCTTTAATATGAAAATGCCTTTCCTCTGTATCTCT | + |
Preference number: 1 (lower is better) Translates to: LHFPILRTRQPPQLF*CPRFNMKMPFLCIS Trigger: AGAGATACAGAGGAAAGGCATTTTCATATTAAAGCGAGGGCACCAAAATAGCTGAGGTGGCTGCCTTGTTCGTAATATTGGGAAATGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR TCA 90 bp | GAACAAGGCAGCCACCTCAGCTATTTTGGTGCCCTCGCTTTAATATaGAAATGCCTTTCCTCTGTATCTCTAAGAAATTTTCTCAGAAAA | + |
Preference number: 1 (lower is better) Translates to: EQGSHLSYFGALALI*KCLSSVSLRNFLRK Trigger: TTTTCTGAGAAAATTTCTTAGAGATACAGAGGAAAGGCATTTTCATATTAAAGCGAGGGCACCAAAATAGCTGAGGTGGCTGCCTTGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR TCA 90 bp | TTTAAAAATAAGTTTTCTACAATATCCATAAACATTCCACTGGCGTaGATGCTAAATCTAAACCTAAGCTTAACGCCAGCCACCTCACCA | + |
Preference number: 1 (lower is better) Translates to: FKNKFSTISINIPLA*MLNLNLSLTPATSP Trigger: TGGTGAGGTGGCTGGCGTTAAGCTTAGGTTTAGATTTAGCATTCACGCCAGTGGAATGTTTATGGATATTGTAGAAAACTTATTTTTAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR CCA 90 bp | ACAGAAGACTCGGGTCTATTTTATGTCTCATTCACAATATTTTATTaGACCAACAATCTCCAATTAAGGGCATTATGGAGCAAATGCAGT | + |
Preference number: 1 (lower is better) Translates to: TEDSGLFYVSFTIFY*TNNLQLRALWSKCS Trigger: ACTGCATTTGCTCCATAATGCCCTTAATTGGAGATTGTTGGTCCAATAAAATATTGTGAATGAGACATAAAATAGACCCGAGTCTTCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR CCA 90 bp | CTACTTTTTAAACTGAAAGCTGAGGCTAAAGTTTTGTCTTATGAATaGCATAACTTTCACTTTGTATGCAAAGGATATGGAATCCGTGAG | + |
Preference number: 1 (lower is better) Translates to: LLFKLKAEAKVLSYE*HNFHFVCKGYGIRE Trigger: CTCACGGATTCCATATCCTTTGCATACAAAGTGAAAGTTATGCCATTCATAAGACAAAACTTTAGCCTCAGCTTTCAGTTTAAAAAGTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR-3UTR GCA 90 bp | GACAAAGCAGGTCTGCTTAGGGTCACCTTGGGCTCCTCTTCCCTTGGTGGGGGAAAGGGGGAGGAATTCTaGTCCTGGCCTCCCACCCAG | + |
Preference number: 2 (lower is better) Translates to: DKAGLLRVTLGSSSLGGGKGEEF*SWPPTQ Trigger: CTGGGTGGGAGGCCAGGAGCAGAATTCCTCCCCCTT...TCCCCCACCAAGGGAAGAGGAGCCCAAGGTGACCCTAAGCAGACCTGCTTTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR CAA 90 bp | GGGACAAAGCAGGTCTGCTTAGGGTCACCTTGGGCTCCTCTTCCCTaGGTGGGGGAGGGGCCACCATTCAGATACCCACTTGTCTCTGGA | + |
Preference number: 2 (lower is better) Translates to: GTKQVCLGSPWAPLP*VGEGPPFRYPLVSG Trigger: TCCAGAGACAAGTGGGTATCTGAATGGTGGCCCCTCCCCCACCAAGGGAAGAGGAGCCCAAGGTGACCCTAAGCAGACCTGCTTTGTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR CCA 90 bp | AGTGAAGGGACAAAGCAGGTCTGCTTAGGGTCACCTTGGGCTCCTCTTCCCTTGCGTGTTCTGGGTTGCTaGGGCAAAAGGGAGGTGGGG | + |
Preference number: 2 (lower is better) Translates to: SEGTKQVCLGSPWAPLPLRVLGC*GKREVG Trigger: CCCCACCTCCCTTTTGCCCCAGCAACCCAGAACACG...CAAGGGAAGAGGAGCCCAAGGTGACCCTAAGCAGACCTGCTTTGTCCCTTCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR CCA 90 bp | AGTGAAGGGACAAAGCAGGTCTGCTTAGGGTCACCTTGGGCTCCTCTTCCCTTGAGACCAGGAGGGGTATaGGGTCCTGCCCTCGAAAGG | + |
Preference number: 2 (lower is better) Translates to: SEGTKQVCLGSPWAPLPLRPGGV*GPALER Trigger: CCTTTCGAGGGCAGGACCCCATACCCCTCCTGGTCT...CAAGGGAAGAGGAGCCCAAGGTGACCCTAAGCAGACCTGCTTTGTCCCTTCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR GCA 90 bp | TGCCCCAGTGGCCTGGCTTGGGGTATTGACTGGCCTCTATGGGCAATGGTGCCAGTACTTCCTAAAGTTTaGGGCGTGACTCGTGTTCTG | + |
Preference number: 2 (lower is better) Translates to: CPSGLAWGIDWPLWAMVPVLPKV*GVTRVL Trigger: CAGAACACGAGTCACGCCGCAAACTTTAGGAAGTAC...TGGCACCATTGCCCATAGAGGCCAGTCAATACCCCAAGCCAGGCCACTGGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR GCA 90 bp | GGGCTCCTCTTCCCTTGGTGGGGGAGGGGCCACCATTCAGATACCCACTTGTCTTGGATTCTCCAGGCTTaGACACTGAGAGTGAAATCA | + |
Preference number: 2 (lower is better) Translates to: GLLFPWWGRGHHSDTHLSWILQA*TLRVKS Trigger: TGATTTCACTCTCAGTGTGCAAGCCTGGAGAATCCA...AGACAAGTGGGTATCTGAATGGTGGCCCCTCCCCCACCAAGGGAAGAGGAGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR CCA 90 bp | TCTCAGAAAAGAGATACAGAACTGGTCCAGAGCCCCTGTGGTTCTAGAAGGTGCCTCCTCTTCCCTTGGTaGGGGAGGGGCCACCATTCA | + |
Preference number: 2 (lower is better) Translates to: SQKRDTELVQSPCGSRRCLLFPW*GRGHHS Trigger: TGAATGGTGGCCCCTCCCCCACCAAGGGAAGAGGAG...GCACCTTCTAGAACCACAGGGGCTCTGGACCAGTTCTGTATCTCTTTTCTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR-3UTR GCA 90 bp | CAAGAAACCAGTAACCCAGGCCCAGGAGTCCCTGCTATCCTAGTCCTCTTTCTTGGGACAAAGCAGGTCTaGTTAGGGTCACCTTGGGCT | + |
Preference number: 2 (lower is better) Translates to: QETSNPGPGVPAILVLFLGTKQV*LGSPWA Trigger: AGCCCAAGGTGACCCTAAGCAGACCTGCTTTGTCCC...AAGAAAGAGGACTAGGATAGCAGGGACTCCTGGGCCTGGGTTACTGGTTTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR-3UTR TCA 90 bp | GACAAAGCAGGTCTGCTTAGGGTCACCTTGGGCTCCTCTTCCCTTGGTGGGGGACTTTTTCCCCACAGATaGAAATGGATGAAGGAAGGA | + |
Preference number: 2 (lower is better) Translates to: DKAGLLRVTLGSSSLGGGLFPHR*KWMKEG Trigger: TCCTTCCTTCATCCATTTTCATCTGTGGGGAAAAAG...TCCCCCACCAAGGGAAGAGGAGCCCAAGGTGACCCTAAGCAGACCTGCTTTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR TCA 90 bp | CAAGAAACCAGTAACCCAGGCCCAGGAGTCCCTGCTATCCTAGTCCTCTTTCTTATAGGATGGGGACCCTaGAGGCCAGGTGCATTATCA | + |
Preference number: 2 (lower is better) Translates to: QETSNPGPGVPAILVLFLIGWGP*RPGALS Trigger: TGATAATGCACCTGGCCTTCAGGGTCCCCATCCTAT...AAGAAAGAGGACTAGGATAGCAGGGACTCCTGGGCCTGGGTTACTGGTTTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR-3UTR CCA 90 bp | TTCCTGGTTTATGGATGCAACCCCTTCACTCCATGCTACCTATTTGTTCCAATCGAGGAATTCTGCTCCTaGCCTCCCACCCAGCCCGTC | + |
Preference number: 2 (lower is better) Translates to: FLVYGCNPFTPCYLFVPIEEFCS*PPTQPV Trigger: GACGGGCTGGGTGGGAGGCCAGGAGCAGAATTCCTC...GATTGGAACAAATAGGTAGCATGGAGTGAAGGGGTTGCATCCATAAACCAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR-3UTR CCA 90 bp | CGGCTCCTTTTTGCAGTGGGGCTCAGCCTTTATAAAGCTATGAAACTGATGGATAGACCAGGAGGGGTATaGGGTCCTGCCCTCGAAAGG | + |
Preference number: 2 (lower is better) Translates to: RLLFAVGLSLYKAMKLMDRPGGV*GPALER Trigger: CCTTTCGAGGGCAGGACCCCATACCCCTCCTGGTCT...ATCCATCAGTTTCATAGCTTTATAAAGGCTGAGCCCCACTGCAAAAAGGAGCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR CAA 90 bp | CCACGCGCATCAGCAGTGGGGCTGGAAGCCCATAAAGCGTTGGCCTaGAACTCAAGGATAAGAATCCATAAAGGAGAACAAAGCCTGGAT | + |
Preference number: 2 (lower is better) Translates to: PRASAVGLEAHKALA*NSRIRIHKGEQSLD Trigger: ATCCAGGCTTTGTTCTCCTTTATGGATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATGGGCTTCCAGCCCCACTGCTGATGCGCGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR CAA 90 bp | ATGGTGCCACGCGCATCAGCAGTGGGGCTGGAAGCCCATAAAGCGTaGGCCTTGAACTCAAGGATAAGAATCCATAAAGGAGAACAAAGC | + |
Preference number: 2 (lower is better) Translates to: MVPRASAVGLEAHKA*ALNSRIRIHKGEQS Trigger: GCTTTGTTCTCCTTTATGGATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATGGGCTTCCAGCCCCACTGCTGATGCGCGTGGCACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR CAA 90 bp | ACATACACGCTCGCACACATGTACATCTACGTGAGAGCGAGAGACTaGAGCACACGCACGCGCACAGTGGAGAAGATGAAAATGGTACTT | + |
Preference number: 2 (lower is better) Translates to: TYTLAHMYIYVRARD*STRTRTVEKMKMVL Trigger: AAGTACCATTTTCATCTTCTCCACTGTGCGCGTGCGTGTGCTCAAGTCTCTCGCTCTCACGTAGATGTACATGTGTGCGAGCGTGTATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR GCA 90 bp | GGGCTCCTCTTCCCTTGGTGGGGGAGGGGCCACCATTCAGATACCCACTTGTCTTACACAGCAGTCATTTaGTTAGAAGATAGACACATA | + |
Preference number: 2 (lower is better) Translates to: GLLFPWWGRGHHSDTHLSYTAVI*LEDRHI Trigger: TATGTGTCTATCTTCTAAGCAAATGACTGCTGTGTA...AGACAAGTGGGTATCTGAATGGTGGCCCCTCCCCCACCAAGGGAAGAGGAGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR GCA 90 bp | CAAATACTTATGGAGCAGAACGTGGCCGAAGTTCACCAGGATGAACCGTGTTCACACACGGCTCCTTTTTaGAGTGGGGCTCAGCCTTTA | + |
Preference number: 2 (lower is better) Translates to: QILMEQNVAEVHQDEPCSHTAPF*SGAQPL Trigger: TAAAGGCTGAGCCCCACTGCAAAAAGGAGCCGTGTG...TGAACACGGTTCATCCTGGTGAACTTCGGCCACGTTCTGCTCCATAAGTATTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR-3UTR GCA 90 bp | TCTCAGAAAAGAGATACAGAACTGGTCCAGAGCCCCTGTGGTTCTAGAAGGTGCTGTCGGGCTTTGGAATaGTCATACTGCTGCTTGGAC | + |
Preference number: 2 (lower is better) Translates to: SQKRDTELVQSPCGSRRCCRALE*SYCCLD Trigger: GTCCAAGCAGCAGTATGAGCATTCCAAAGCCCGACA...GCACCTTCTAGAACCACAGGGGCTCTGGACCAGTTCTGTATCTCTTTTCTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR-3UTR CCA 90 bp | AGTGTTAGTGTGAAGAGGACTCTCACAGAGATAAGTCTAAACAGAGTAGGGAAGGGCCTCTATGGGCAATaGTGCCACGCGCATCAGCAG | + |
Preference number: 2 (lower is better) Translates to: SVSVKRTLTEISLNRVGKGLYGQ*CHAHQQ Trigger: CTGCTGATGCGCGTGGCACCATTGCCCATAGAGGCC...CTTCCCTACTCTGTTTAGACTTATCTCTGTGAGAGTCCTCTTCACACTAACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR CCA 90 bp | CAAATACTTATGGAGCAGAACGTGGCCGAAGTTCACCAGGATGAACCGTGTTCATTGGTTGGGTCAGGCTaGAGAATCTCCACTGAGGGA | + |
Preference number: 2 (lower is better) Translates to: QILMEQNVAEVHQDEPCSLVGSG*RISTEG Trigger: TCCCTCAGTGGAGATTCTCCAGCCTGACCCAACCAA...TGAACACGGTTCATCCTGGTGAACTTCGGCCACGTTCTGCTCCATAAGTATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR CAA 90 bp | TACCTGACCAACAAGGTTGTGGGATTACAGATATTACTGAGCCTGTaGCCCATGAACAAGACTCCAAGGTGGGGTCTCCTACATCCACAC | + |
Preference number: 2 (lower is better) Translates to: YLTNKVVGLQILLSL*PMNKTPRWGLLHPH Trigger: GTGTGGATGTAGGAGACCCCACCTTGGAGTCTTGTTCATGGGCAACAGGCTCAGTAATATCTGTAATCCCACAACCTTGTTGGTCAGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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3UTR CAA 90 bp | GGGCTCAGCCTTTATAAAGCTATGAAACTGATGGATTCTCCAGGCTaGCACACTGAGAGTGAAATCAGCGACCATCTTCCTCCCCTAGGT | + |
Preference number: 2 (lower is better) Translates to: GLSLYKAMKLMDSPG*HTESEISDHLPPLG Trigger: ACCTAGGGGAGGAAGATGGTCGCTGATTTCACTCTCAGTGTGCAAGCCTGGAGAATCCATCAGTTTCATAGCTTTATAAAGGCTGAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR TCA 90 bp | CAGCAACTCGTGACAGCCGCACCTCACAACTACAGTGCAGGACAGTATCTACAGGCACAGTGGAGAAGATaGAAATGGTACTTCCTAAAG | + |
Preference number: 2 (lower is better) Translates to: QQLVTAAPHNYSAGQYLQAQWRR*KWYFLK Trigger: CTTTAGGAAGTACCATTTTCATCTTCTCCACTGTGC...CTGTAGATACTGTCCTGCACTGTAGTTGTGAGGTGCGGCTGTCACGAGTTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR CCA 90 bp | CTCAGCAATAACCCTTCATCCTTTCTCAAGGTGAATCACTTTGGATGCTTCTATCTCCTCTTCCCTTGGTaGGGGAGGGGCCACCATTCA | + |
Preference number: 2 (lower is better) Translates to: LSNNPSSFLKVNHFGCFYLLFPW*GRGHHS Trigger: TGAATGGTGGCCCCTCCCCCACCAAGGGAAGAGGAG...ATAGAAGCATCCAAAGTGATTCACCTTGAGAAAGGATGAAGGGTTATTGCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR CCA 90 bp | CACATTGCTCAGACCTTCCTTATGGTTAAGCAAATAGCTCAGCTTTCAGTGTTAAGTGCCCCAGTGGCCTaGCTTGGGGTATTGACTGGC | + |
Preference number: 2 (lower is better) Translates to: HIAQTFLMVKQIAQLSVLSAPVA*LGVLTG Trigger: GCCAGTCAATACCCCAAGCCAGGCCACTGGGGCACT...TAACACTGAAAGCTGAGCTATTTGCTTAACCATAAGGAAGGTCTGAGCAATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR CCA 90 bp | TTCATCCTTTCTCAAGGTGAATCACTTTGGATGCTTCTATACAGTTTTAAGGGAGAGGAATTCTGCTCCTaGCCTCCCACCCAGCCCGTC | + |
Preference number: 2 (lower is better) Translates to: FILSQGESLWMLLYSFKGEEFCS*PPTQPV Trigger: GACGGGCTGGGTGGGAGGCCAGGAGCAGAATTCCTC...TCCCTTAAAACTGTATAGAAGCATCCAAAGTGATTCACCTTGAGAAAGGATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR CCA 90 bp | ATCAGAAGGTTTAGAGGTGGGAGAGACCATGAAGTGTCCTTTGAATTCTTGACTTGCTTAGGGTCACCTTaGGCTCCTCTTCCCTTGGTG | + |
Preference number: 2 (lower is better) Translates to: IRRFRGGRDHEVSFEFLTCLGSP*APLPLV Trigger: CACCAAGGGAAGAGGAGCCCAAGGTGACCCTAAGCA...AGTCAAGAATTCAAAGGACACTTCATGGTCTCTCCCACCTCTAAACCTTCTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR-3UTR CCA 90 bp | GAAGCCCATAAAGCGTTGGCCTTGAACTCAAGGATAAGAATCCATAAAGGAGAATGCTTAGGGTCACCTTaGGCTCCTCTTCCCTTGGTG | + |
Preference number: 2 (lower is better) Translates to: EAHKALALNSRIRIHKGECLGSP*APLPLV Trigger: CACCAAGGGAAGAGGAGCCCAAGGTGACCCTAAGCA...TTCTCCTTTATGGATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATGGGCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR CCA 90 bp | TCTCAGAAAAGAGATACAGAACTGGTCCAGAGCCCCTGTGGTTCTAGAAGGTGCGCCAATGTATCATATTaGAATATGGCACCCCTTCCC | + |
Preference number: 2 (lower is better) Translates to: SQKRDTELVQSPCGSRRCANVSY*NMAPLP Trigger: GGGAAGGGGTGCCATATTCCAATATGATACATTGGC...GCACCTTCTAGAACCACAGGGGCTCTGGACCAGTTCTGTATCTCTTTTCTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR-3UTR CCA 90 bp | TATGCATATAACACTGTTAATGAGGAGACGTCTAACCAAGAACAGGATTTATACGGACTGGGGAGGTGTTaGGTGGGCGGGTCTCTCTCC | + |
Preference number: 2 (lower is better) Translates to: YAYNTVNEETSNQEQDLYGLGRC*VGGSLS Trigger: GGAGAGAGACCCGCCCACCCAACACCTCCCCAGTCC...GTATAAATCCTGTTCTTGGTTAGACGTCTCCTCATTAACAGTGTTATATGCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR-3UTR TCA 90 bp | GAAGCCCATAAAGCGTTGGCCTTGAACTCAAGGATAAGAATCCATAAAGGAGAACTAAAGTTTGCGGCGTaGCTCGTGTTCTGGGTTGCT | + |
Preference number: 2 (lower is better) Translates to: EAHKALALNSRIRIHKGELKFAA*LVFWVA Trigger: AGCAACCCAGAACACGAGTCACGCCGCAAACTTTAG...TTCTCCTTTATGGATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATGGGCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR CCA 90 bp | CGGCTCCTTTTTGCAGTGGGGCTCAGCCTTTATAAAGCTATGAAACTGATGGATAGGAAGGATAAAGTGTaGGGGGACTTAATAGCCACC | + |
Preference number: 2 (lower is better) Translates to: RLLFAVGLSLYKAMKLMDRKDKV*GDLIAT Trigger: GGTGGCTATTAAGTCCCCCCACACTTTATCCTTCCT...ATCCATCAGTTTCATAGCTTTATAAAGGCTGAGCCCCACTGCAAAAAGGAGCCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR CCA 90 bp | AGTGTTAGTGTGAAGAGGACTCTCACAGAGATAAGTCTAAACAGAGTAGGGAAGGGGTCTATGTACACATaGACCATTCCCCTGGCATGC | + |
Preference number: 2 (lower is better) Translates to: SVSVKRTLTEISLNRVGKGSMYT*TIPLAC Trigger: GCATGCCAGGGGAATGGTCCATGTGTACATAGACCC...CTTCCCTACTCTGTTTAGACTTATCTCTGTGAGAGTCCTCTTCACACTAACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR CCA 90 bp | CTCAGCAATAACCCTTCATCCTTTCTCAAGGTGAATCACTTTGGATGCTTCTATGGGTCTATGTACACATaGACCATTCCCCTGGCATGC | + |
Preference number: 2 (lower is better) Translates to: LSNNPSSFLKVNHFGCFYGSMYT*TIPLAC Trigger: GCATGCCAGGGGAATGGTCCATGTGTACATAGACCC...ATAGAAGCATCCAAAGTGATTCACCTTGAGAAAGGATGAAGGGTTATTGCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR TCA 90 bp | AGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATGCTTTAGAGAAACAGATGTCCTTAGCATaGTGGAATCTTTACACAGCA | + |
Preference number: 2 (lower is better) Translates to: STMGLCTHGPFPWHALEKQMSLA*WNLYTA Trigger: TGCTGTGTAAAGATTCCATCATGCTAAGGACATCTG...TTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR TCA 90 bp | AGAGGAGAGACATTCTTAAAAAGAATCTCAGATCTTGCTGGAGTTATGGGCAAACTAAAGTTTGCGGCGTaGCTCGTGTTCTGGGTTGCT | + |
Preference number: 2 (lower is better) Translates to: RGETFLKRISDLAGVMGKLKFAA*LVFWVA Trigger: AGCAACCCAGAACACGAGTCACGCCGCAAACTTTAG...TTTGCCCATAACTCCAGCAAGATCTGAGATTCTTTTTAAGAATGTCTCTCCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR-3UTR TCA 90 bp | ATCAGAAGGTTTAGAGGTGGGAGAGACCATGAAGTGTCCTTTGAATTCTTGACTTGTACAGTGATATTCTaGGTGACTCCCAGCTGGGTT | + |
Preference number: 2 (lower is better) Translates to: IRRFRGGRDHEVSFEFLTCTVIF*VTPSWV Trigger: AACCCAGCTGGGAGTCACTCAGAATATCACTGTACA...AGTCAAGAATTCAAAGGACACTTCATGGTCTCTCCCACCTCTAAACCTTCTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR-3UTR GCA 90 bp | GAAGCCCATAAAGCGTTGGCCTTGAACTCAAGGATAAGAATCCATAAAGGAGAAGTACTTCCTAAAGTTTaGGGCGTGACTCGTGTTCTG | + |
Preference number: 2 (lower is better) Translates to: EAHKALALNSRIRIHKGEVLPKV*GVTRVL Trigger: CAGAACACGAGTCACGCCGCAAACTTTAGGAAGTAC...TTCTCCTTTATGGATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATGGGCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR CCA 90 bp | GGTATGGTGAGTATTGTCTCCAGTTGGAGCAAAGACTTTTCACATTTAGTCGTTGAGCCATCCATTTCCTaGCCCTTACATTACCCCAGT | + |
Preference number: 2 (lower is better) Translates to: GMVSIVSSWSKDFSHLVVEPSIS*PLHYPS Trigger: ACTGGGGTAATGTAAGGGCCAGGAAATGGATGGCTC...AACGACTAAATGTGAAAAGTCTTTGCTCCAACTGGAGACAATACTCACCATACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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3UTR-3UTR CCA 90 bp | TACAGATGCCCTTTGTCCTTGGTAGATGAATGTAAGCCTCAGTGTGAAATCTCTAGGAAGGATAAAGTGTaGGGGGACTTAATAGCCACC | + |
Preference number: 2 (lower is better) Translates to: YRCPLSLVDECKPQCEISRKDKV*GDLIAT Trigger: GGTGGCTATTAAGTCCCCCCACACTTTATCCTTCCT...AGAGATTTCACACTGAGGCTTACATTCATCTACCAAGGACAAAGGGCATCTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR CAA 90 bp | TTCTTGGCTCCAATCCTGATACACCTTTCATGTTACAGATGCCCTTaGTCCTTGGTAGATGAATGTAAGCCTCAGTGTGAAATCTCTTCC | + |
Preference number: 2 (lower is better) Translates to: FLAPILIHLSCYRCP*SLVDECKPQCEISS Trigger: GGAAGAGATTTCACACTGAGGCTTACATTCATCTACCAAGGACAAAGGGCATCTGTAACATGAAAGGTGTATCAGGATTGGAGCCAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR-3UTR TCA 90 bp | TTCATGTACAGTGATATTCTGAGTGACTCCCAGCTGGGTTCTGAAAATGAGACCCAGATGTCCTTAGCATaGTGGAATCTTTACACAGCA | + |
Preference number: 2 (lower is better) Translates to: FMYSDILSDSQLGSENETQMSLA*WNLYTA Trigger: TGCTGTGTAAAGATTCCATCATGCTAAGGACATCTG...GGTCTCATTTTCAGAACCCAGCTGGGAGTCACTCAGAATATCACTGTACATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR TCA 90 bp | CACATTGCTCAGACCTTCCTTATGGTTAAGCAAATAGCTCAGCTTTCAGTGTTATGTACAGTGATATTCTaGGTGACTCCCAGCTGGGTT | + |
Preference number: 2 (lower is better) Translates to: HIAQTFLMVKQIAQLSVLCTVIF*VTPSWV Trigger: AACCCAGCTGGGAGTCACTCAGAATATCACTGTACA...TAACACTGAAAGCTGAGCTATTTGCTTAACCATAAGGAAGGTCTGAGCAATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR GCA 90 bp | TTCATCCTTTCTCAAGGTGAATCACTTTGGATGCTTCTATACAGTTTTAAGGGACACACGGCTCCTTTTTaGAGTGGGGCTCAGCCTTTA | + |
Preference number: 2 (lower is better) Translates to: FILSQGESLWMLLYSFKGHTAPF*SGAQPL Trigger: TAAAGGCTGAGCCCCACTGCAAAAAGGAGCCGTGTG...TCCCTTAAAACTGTATAGAAGCATCCAAAGTGATTCACCTTGAGAAAGGATGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR CCA 90 bp | TTCATGTACAGTGATATTCTGAGTGACTCCCAGCTGGGTTCTGAAAATGAGACCGTATCTACAGCACAATaGGTCTATGTACACATGGAC | + |
Preference number: 2 (lower is better) Translates to: FMYSDILSDSQLGSENETVSTAQ*VYVHMD Trigger: GTCCATGTGTACATAGACCCATTGTGCTGTAGATAC...GGTCTCATTTTCAGAACCCAGCTGGGAGTCACTCAGAATATCACTGTACATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR CAA 90 bp | GCTCCAATCCTGATACACCTTTCATGTTACAGATGCCCTTTGTCCTaGGTAGATGAATGTAAGCCTCAGTGTGAAATCTCTTCCTACAAT | + |
Preference number: 2 (lower is better) Translates to: APILIHLSCYRCPLS*VDECKPQCEISSYN Trigger: ATTGTAGGAAGAGATTTCACACTGAGGCTTACATTCATCTACCAAGGACAAAGGGCATCTGTAACATGAAAGGTGTATCAGGATTGGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR-3UTR TCA 90 bp | TTCCTGGTTTATGGATGCAACCCCTTCACTCCATGCTACCTATTTGTTCCAATCCCACCTGGTACTTCTTaGATAGTCTCATTTGTACAA | + |
Preference number: 2 (lower is better) Translates to: FLVYGCNPFTPCYLFVPIPPGTS*IVSFVQ Trigger: TTGTACAAATGAGACTATTCAAGAAGTACCAGGTGG...GATTGGAACAAATAGGTAGCATGGAGTGAAGGGGTTGCATCCATAAACCAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR-3UTR TCA 90 bp | CTCAGCAATAACCCTTCATCCTTTCTCAAGGTGAATCACTTTGGATGCTTCTATAGCACAGCTTGGTTTTaGATGCACACGGATATCATG | + |
Preference number: 2 (lower is better) Translates to: LSNNPSSFLKVNHFGCFYSTAWF*MHTDIM Trigger: CATGATATCCGTGTGCATTCAAAACCAAGCTGTGCT...ATAGAAGCATCCAAAGTGATTCACCTTGAGAAAGGATGAAGGGTTATTGCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR TCA 90 bp | TTCCTGGTTTATGGATGCAACCCCTTCACTCCATGCTACCTATTTGTTCCAATCTCTCAGTTCTGCATGTaGCGTAGCAACATTCTAAAA | + |
Preference number: 2 (lower is better) Translates to: FLVYGCNPFTPCYLFVPISQFCM*RSNILK Trigger: TTTTAGAATGTTGCTACGTCACATGCAGAACTGAGA...GATTGGAACAAATAGGTAGCATGGAGTGAAGGGGTTGCATCCATAAACCAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR-3UTR CCA 90 bp | AGAGGAGAGACATTCTTAAAAAGAATCTCAGATCTTGCTGGAGTTATGGGCAAACATGGACCATTCCCCTaGCATGCTTTAGAGAAAGAC | + |
Preference number: 2 (lower is better) Translates to: RGETFLKRISDLAGVMGKHGPFP*HALEKD Trigger: GTCTTTCTCTAAAGCATGCCAGGGGAATGGTCCATG...TTTGCCCATAACTCCAGCAAGATCTGAGATTCTTTTTAAGAATGTCTCTCCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR-3UTR CCA 90 bp | TATAATAGGATGGGGACCCTGAAGGCCAGGTGCATTATCAAAGCTTATGATATGGTATCTACAGCACAATaGGTCTATGTACACATGGAC | + |
Preference number: 2 (lower is better) Translates to: YNRMGTLKARCIIKAYDMVSTAQ*VYVHMD Trigger: GTCCATGTGTACATAGACCCATTGTGCTGTAGATAC...CATATCATAAGCTTTGATAATGCACCTGGCCTTCAGGGTCCCCATCCTATTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR-3UTR GCA 90 bp | AGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATGCTTTAGAGAAATACACAGCAGTCATTTaGTTAGAAGATAGACACATA | + |
Preference number: 2 (lower is better) Translates to: STMGLCTHGPFPWHALEKYTAVI*LEDRHI Trigger: TATGTGTCTATCTTCTAAGCAAATGACTGCTGTGTA...TTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR CCA 90 bp | CCTTTAAAAGGACTGATCCCTTCTCTGCCAACTTTCAGGGTCTTCTCTGATCTTAGGAAAACTACTCTCTaGCATATTATAAGAGCCATC | + |
Preference number: 2 (lower is better) Translates to: PLKGLIPSLPTFRVFSDLRKTTL*HIIRAI Trigger: GATGGCTCTTATAATATGCCAGAGAGTAGTTTTCCT...AAGATCAGAGAAGACCCTGAAAGTTGGCAGAGAAGGGATCAGTCCTTTTAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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3UTR-3UTR CCA 90 bp | TGTTACAGATGCCCTTTGTCCTTGGTAGATGAATGTAAGCCTCAGTGTGAAATCATACCCACTTGTCTCTaGAGATTTGCTCAATACACA | + |
Preference number: 2 (lower is better) Translates to: CYRCPLSLVDECKPQCEIIPTCL*RFAQYT Trigger: TGTGTATTGAGCAAATCTCCAGAGACAAGTGGGTAT...GATTTCACACTGAGGCTTACATTCATCTACCAAGGACAAAGGGCATCTGTAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR CAA 90 bp | AAATCAGCAGATACACCTGGGAGTGACATTTTCATTCAAATGACTTaGTACCTTACTTTTAATCCATTGGCCTGTAGATCCACAAGGCTG | + |
Preference number: 2 (lower is better) Translates to: KSADTPGSDIFIQMT*YLTFNPLACRSTRL Trigger: CAGCCTTGTGGATCTACAGGCCAATGGATTAAAAGTAAGGTACAAAGTCATTTGAATGAAAATGTCACTCCCAGGTGTATCTGCTGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR-3UTR TCA 90 bp | CACATTGCTCAGACCTTCCTTATGGTTAAGCAAATAGCTCAGCTTTCAGTGTTACCACCTGGTACTTCTTaGATAGTCTCATTTGTACAA | + |
Preference number: 2 (lower is better) Translates to: HIAQTFLMVKQIAQLSVLPPGTS*IVSFVQ Trigger: TTGTACAAATGAGACTATTCAAGAAGTACCAGGTGG...TAACACTGAAAGCTGAGCTATTTGCTTAACCATAAGGAAGGTCTGAGCAATGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR CCA 90 bp | CACATTGCTCAGACCTTCCTTATGGTTAAGCAAATAGCTCAGCTTTCAGTGTTAATACCCACTTGTCTCTaGAGATTTGCTCAATACACA | + |
Preference number: 2 (lower is better) Translates to: HIAQTFLMVKQIAQLSVLIPTCL*RFAQYT Trigger: TGTGTATTGAGCAAATCTCCAGAGACAAGTGGGTAT...TAACACTGAAAGCTGAGCTATTTGCTTAACCATAAGGAAGGTCTGAGCAATGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR CAA 90 bp | AGAAGGTTTAGAGGTGGGAGAGACCATGAAGTGTCCTTTGAATTCTaGACTTTCCAGATGAGAAAACTAAAAACTCAGGAACTGGAATTA | + |
Preference number: 2 (lower is better) Translates to: RRFRGGRDHEVSFEF*TFQMRKLKTQELEL Trigger: TAATTCCAGTTCCTGAGTTTTTAGTTTTCTCATCTGGAAAGTCAAGAATTCAAAGGACACTTCATGGTCTCTCCCACCTCTAAACCTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR-3UTR TCA 90 bp | TTCATCCTTTCTCAAGGTGAATCACTTTGGATGCTTCTATACAGTTTTAAGGGAGCACAGTGGAGAAGATaGAAATGGTACTTCCTAAAG | + |
Preference number: 2 (lower is better) Translates to: FILSQGESLWMLLYSFKGAQWRR*KWYFLK Trigger: CTTTAGGAAGTACCATTTTCATCTTCTCCACTGTGC...TCCCTTAAAACTGTATAGAAGCATCCAAAGTGATTCACCTTGAGAAAGGATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR GCA 90 bp | TTCATCCTTTCTCAAGGTGAATCACTTTGGATGCTTCTATACAGTTTTAAGGGAACCATTCCCCTGGCATaGTTTAGAGAAAGACACATA | + |
Preference number: 2 (lower is better) Translates to: FILSQGESLWMLLYSFKGTIPLA*FRERHI Trigger: TATGTGTCTTTCTCTAAAGCATGCCAGGGGAATGGT...TCCCTTAAAACTGTATAGAAGCATCCAAAGTGATTCACCTTGAGAAAGGATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR GCA 90 bp | CAAGGGTATGGTGAGTATTGTCTCCAGTTGGAGCAAAGACTTTTCACATTTAGTTCTATTTGTAAATATTaGTGTTTGTGGAGACTGACC | + |
Preference number: 2 (lower is better) Translates to: QGYGEYCLQLEQRLFTFSSICKY*CLWRLT Trigger: GGTCAGTCTCCACAAACAGCAATATTTACAAATAGA...ACTAAATGTGAAAAGTCTTTGCTCCAACTGGAGACAATACTCACCATACCCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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3UTR-3UTR CCA 90 bp | GGTTTTGCAGACTCTCAGATTTATAATTTGAACCTAGGGTTTGCCTATATCCCTAGTATTGTCTCCAGTTaGAGCAAAGACTTTTCACAT | + |
Preference number: 2 (lower is better) Translates to: GFADSQIYNLNLGFAYIPSIVSS*SKDFSH Trigger: ATGTGAAAAGTCTTTGCTCCAACTGGAGACAATACT...AGGGATATAGGCAAACCCTAGGTTCAAATTATAAATCTGAGAGTCTGCAAAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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3UTR-3UTR TCA 90 bp | TTCATCCTTTCTCAAGGTGAATCACTTTGGATGCTTCTATACAGTTTTAAGGGAAAATGCAGTGTTACTTaGAGATTAGTGAAGGGACAA | + |
Preference number: 2 (lower is better) Translates to: FILSQGESLWMLLYSFKGKCSVT*RLVKGQ Trigger: TTGTCCCTTCACTAATCTTCAAGTAACACTGCATTT...TCCCTTAAAACTGTATAGAAGCATCCAAAGTGATTCACCTTGAGAAAGGATGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR CCA 90 bp | TCTGTCTCTCAGGGACATTTGAATCTAGAATTATATCTACCTGACCAACAAGGTACACAGATGAAAAACTaGGAAGTTATCCAAAGTAAG | + |
Preference number: 2 (lower is better) Translates to: SVSQGHLNLELYLPDQQGTQMKN*EVIQSK Trigger: CTTACTTTGGATAACTTCCCAGTTTTTCATCTGTGT...ACCTTGTTGGTCAGGTAGATATAATTCTAGATTCAAATGTCCCTGAGAGACAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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3UTR-3UTR CCA 90 bp | TATGCATATAACACTGTTAATGAGGAGACGTCTAACCAAGAACAGGATTTATACGACTTAATAGCCACCTaGTACTTCTTGAATAGTCTC | + |
Preference number: 2 (lower is better) Translates to: YAYNTVNEETSNQEQDLYDLIAT*YFLNSL Trigger: GAGACTATTCAAGAAGTACCAGGTGGCTATTAAGTC...GTATAAATCCTGTTCTTGGTTAGACGTCTCCTCATTAACAGTGTTATATGCATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR-3UTR CCA 90 bp | TATGCATATAACACTGTTAATGAGGAGACGTCTAACCAAGAACAGGATTTATACAGTGAGATCAGTGGATaGATTTTTCTGTCAATTGTA | + |
Preference number: 2 (lower is better) Translates to: YAYNTVNEETSNQEQDLYSEISG*IFLSIV Trigger: TACAATTGACAGAAAAATCCATCCACTGATCTCACT...GTATAAATCCTGTTCTTGGTTAGACGTCTCCTCATTAACAGTGTTATATGCATA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR CCA 72 bp | GCCTGGCTTGGGGTATTGACTGGCCTCTATGGGCAATaGTGCCACGCGCATCAGCAGTGGGGCTGGAAGCCC | + |
Preference number: 3 (lower is better) Translates to: AWLGVLTGLYGQ*CHAHQQWGWKP Trigger: GGGCTTCCAGCCCCACTGCTGATGCGCGTGGCACCATTGCCCATAGAGGCCAGTCAATACCCCAAGCCAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR CCA 72 bp | AGTGAAGGGACAAAGCAGGTCTGCTTAGGGTCACCTTaGGCTCCTCTTCCCTTGGTGGGGGAGGGGCCACCA | + |
Preference number: 3 (lower is better) Translates to: SEGTKQVCLGSP*APLPLVGEGPP Trigger: TGGTGGCCCCTCCCCCACCAAGGGAAGAGGAGCCCAAGGTGACCCTAAGCAGACCTGCTTTGTCCCTTCACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR-3UTR CAA 90 bp | GGGCTCCTCTTCCCTTGGTGGGGGAGGGGCCACCATTCAGATACCCACTTGTCTGACTCGTGTTCTGGGTaGCTGGGGCAAAAGGGAGGT | + |
Preference number: 3 (lower is better) Translates to: GLLFPWWGRGHHSDTHLSDSCSG*LGQKGG Trigger: ACCTCCCTTTTGCCCCAGCAACCCAGAACACGAGTC...AGACAAGTGGGTATCTGAATGGTGGCCCCTCCCCCACCAAGGGAAGAGGAGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR GCA 72 bp | TGGCTTGGGGTATTGACTGGCCTCTATGGGCAATGGTaGCACGCGCATCAGCAGTGGGGCTGGAAGCCCATA | + |
Preference number: 3 (lower is better) Translates to: WLGVLTGLYGQW*HAHQQWGWKPI Trigger: TATGGGCTTCCAGCCCCACTGCTGATGCGCGTGGCACCATTGCCCATAGAGGCCAGTCAATACCCCAAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR CCA 72 bp | AATCAGTGCCCCAGTGGCCTGGCTTGGGGTATTGACTaGCCTCTATGGGCAATGGTGCCACGCGCATCAGCA | + |
Preference number: 3 (lower is better) Translates to: NQCPSGLAWGID*PLWAMVPRASA Trigger: TGCTGATGCGCGTGGCACCATTGCCCATAGAGGCCAGTCAATACCCCAAGCCAGGCCACTGGGGCACTGATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR CCA 72 bp | GAGAAGGCAGAACAGGGACGCTGCCAGCAGCCACAGTaGTACGGCCAGACTGACGGATCCGTTGATTCCTCT | + |
Preference number: 3 (lower is better) Translates to: EKAEQGRCQQPQ*YGQTDGSVDSS Trigger: AGAGGAATCAACGGATCCGTCAGTCTGGCCGTACCACTGTGGCTGCTGGCAGCGTCCCTGTTCTGCCTTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133853.3 |
||
3UTR CCA 72 bp | GAAGGTGAGTGCAATCAGTGCCCCAGTGGCCTGGCTTaGGGTATTGACTGGCCTCTATGGGCAATGGTGCCA | + |
Preference number: 3 (lower is better) Translates to: EGECNQCPSGLA*GIDWPLWAMVP Trigger: TGGCACCATTGCCCATAGAGGCCAGTCAATACCCCAAGCCAGGCCACTGGGGCACTGATTGCACTCACCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
||
3UTR CCA 72 bp | GTAGGGAAGGTGAGTGCAATCAGTGCCCCAGTGGCCTaGCTTGGGGTATTGACTGGCCTCTATGGGCAATGG | + |
Preference number: 3 (lower is better) Translates to: VGKVSAISAPVA*LGVLTGLYGQW Trigger: CCATTGCCCATAGAGGCCAGTCAATACCCCAAGCCAGGCCACTGGGGCACTGATTGCACTCACCTTCCCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
||
3UTR GCA 72 bp | TGTCGGGTGGACTCACGAGCACCATCCAAAAAGCTGTaGCTAGGAAGGATCGATGGGACTGGGGAGGTGTTG | + |
Preference number: 3 (lower is better) Translates to: CRVDSRAPSKKL*LGRIDGTGEVL Trigger: CAACACCTCCCCAGTCCCATCGATCCTTCCTAGGCACAGCTTTTTGGATGGTGCTCGTGAGTCCACCCGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR CCA 72 bp | CCCAGCTGGGTTCTGAAAATGAGACCAGGAGGGGTATaGGGTCCTGCCCTCGAAAGGAGCACAGCTTGGTTT | + |
Preference number: 3 (lower is better) Translates to: PSWVLKMRPGGV*GPALERSTAWF Trigger: AAACCAAGCTGTGCTCCTTTCGAGGGCAGGACCCCATACCCCTCCTGGTCTCATTTTCAGAACCCAGCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
||
3UTR CCA 72 bp | TCAAAAGAGGCTCCTGACGGGTGGCGAGGGTTGCTGTaGTACGCCAGGAAGCTAGCTCCGTGGATTTTCTTC | + |
Preference number: 3 (lower is better) Translates to: SKEAPDGWRGLL*YARKLAPWIFF Trigger: GAAGAAAATCCACGGAGCTAGCTTCCTGGCGTACCACAGCAACCCTCGCCACCCGTCAGGAGCCTCTTTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR TCA 72 bp | CCTAGGGTTGGTTGGGTCAGGCTGGAGAATCTCCACTaGGGGAGAAGGAGCAAAGAAAGCCAGCTGACCTTG | + |
Preference number: 3 (lower is better) Translates to: PRVGWVRLENLH*GRRSKESQLTL Trigger: CAAGGTCAGCTGGCTTTCTTTGCTCCTTCTCCCTCAGTGGAGATTCTCCAGCCTGACCCAACCAACCCTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR GCA 72 bp | CTATTAACATTTGCTGAGAAGGCAGAACAGGGACGCTaGCAGCAGCCACAGTGGTACGGCCAGACTGACGGA | + |
Preference number: 3 (lower is better) Translates to: LLTFAEKAEQGR*QQPQWYGQTDG Trigger: TCCGTCAGTCTGGCCGTACCACTGTGGCTGCTGGCAGCGTCCCTGTTCTGCCTTCTCAGCAAATGTTAATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133853.3 |
||
3UTR-3UTR CAA 90 bp | CAAGAAACCAGTAACCCAGGCCCAGGAGTCCCTGCTATCCTAGTCCTCTTTCTTTCCGTTTGCCTAGGGTaGGTTGGGTCAGGCTGGAGA | + |
Preference number: 3 (lower is better) Translates to: QETSNPGPGVPAILVLFLSVCLG*VGSGWR Trigger: TCTCCAGCCTGACCCAACCAACCCTAGGCAAACGGA...AAGAAAGAGGACTAGGATAGCAGGGACTCCTGGGCCTGGGTTACTGGTTTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR GCA 72 bp | AAGTCTAAACAGAGTAGGGAAGGTGAGTGCAATCAGTaGCCCAGTGGCCTGGCTTGGGGTATTGACTGGCCT | + |
Preference number: 3 (lower is better) Translates to: KSKQSREGECNQ*PSGLAWGIDWP Trigger: AGGCCAGTCAATACCCCAAGCCAGGCCACTGGGGCACTGATTGCACTCACCTTCCCTACTCTGTTTAGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
||
3UTR CCA 72 bp | GGCCAACTCTGTTGGCGATGTGATGATGTCGGGCTTTaGAATGCTCATACTGCTGCTTGGACTCATCCCACA | + |
Preference number: 3 (lower is better) Translates to: GQLCWRCDDVGL*NAHTAAWTHPT Trigger: TGTGGGATGAGTCCAAGCAGCAGTATGAGCATTCCAAAGCCCGACATCATCACATCGCCAACAGAGTTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
||
3UTR-3UTR CAA 90 bp | CCACCACATGCAGAGAGGCAGCCTTCCTGTAAGATGTCCCCTAGGCCAACTCTGGAGCACAGCTTGGTTTaGAATGCACACGGATATCAT | + |
Preference number: 3 (lower is better) Translates to: PPHAERQPSCKMSPRPTLEHSLV*NAHGYH Trigger: ATGATATCCGTGTGCATTCAAAACCAAGCTGTGCTC...CAGAGTTGGCCTAGGGGACATCTTACAGGAAGGCTGCCTCTCTGCATGTGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
||
3UTR-3UTR CAA 90 bp | ATCTACAGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATGCTTTAGACTCGTGTTCTGGGTaGCTGGGGCAAAAGGGAGGT | + |
Preference number: 3 (lower is better) Translates to: IYSTMGLCTHGPFPWHALDSCSG*LGQKGG Trigger: ACCTCCCTTTTGCCCCAGCAACCCAGAACACGAGTC...TAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCTGTAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
||
3UTR GCA 72 bp | CCAGCAACTCGTGACAGCCGCACCTCACAACTACAGTaGAGGACAGTATCTACAGCACAATGGGTCTATGTA | + |
Preference number: 3 (lower is better) Translates to: PATRDSRTSQLQ*RTVSTAQWVYV Trigger: TACATAGACCCATTGTGCTGTAGATACTGTCCTGCACTGTAGTTGTGAGGTGCGGCTGTCACGAGTTGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
||
3UTR GCA 72 bp | GGCCACCATTCAGATACCCACTTGTCTCTGGAGATTTaGTCAATACACACGGCTCCTTTTTGCAGTGGGGCT | + |
Preference number: 3 (lower is better) Translates to: GHHSDTHLSLEI*SIHTAPFCSGA Trigger: AGCCCCACTGCAAAAAGGAGCCGTGTGTATTGAGCAAATCTCCAGAGACAAGTGGGTATCTGAATGGTGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
||
3UTR CCA 72 bp | AGCCTTCCTGTAAGATGTCCCCTAGGCCAACTCTGTTaGCGATGTGATGATGTCGGGCTTTGGAATGCTCAT | + |
Preference number: 3 (lower is better) Translates to: SLPVRCPLGQLC*RCDDVGLWNAH Trigger: ATGAGCATTCCAAAGCCCGACATCATCACATCGCCAACAGAGTTGGCCTAGGGGACATCTTACAGGAAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
||
3UTR-3UTR CAA 90 bp | CCACCACATGCAGAGAGGCAGCCTTCCTGTAAGATGTCCCCTAGGCCAACTCTGCAAATGCAGTGTTACTaGAAGATTAGTGAAGGGACA | + |
Preference number: 3 (lower is better) Translates to: PPHAERQPSCKMSPRPTLQMQCY*KISEGT Trigger: TGTCCCTTCACTAATCTTCAAGTAACACTGCATTTG...CAGAGTTGGCCTAGGGGACATCTTACAGGAAGGCTGCCTCTCTGCATGTGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
||
3UTR TCA 72 bp | ATCTCCACTGAGGGAGAAGGAGCAAAGAAAGCCAGCTaGCCTTGGCTAGAAGAGCGTCTAAGTGTTCTGAGT | + |
Preference number: 3 (lower is better) Translates to: ISTEGEGAKKAS*PWLEERLSVLS Trigger: ACTCAGAACACTTAGACGCTCTTCTAGCCAAGGTCAGCTGGCTTTCTTTGCTCCTTCTCCCTCAGTGGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR GCA 72 bp | TGTTACTTGAAGATTAGTGAAGGGACAAAGCAGGTCTaGTTAGGGTCACCTTGGGCTCCTCTTCCCTTGGTG | + |
Preference number: 3 (lower is better) Translates to: CYLKISEGTKQV*LGSPWAPLPLV Trigger: CACCAAGGGAAGAGGAGCCCAAGGTGACCCTAAGCAGACCTGCTTTGTCCCTTCACTAATCTTCAAGTAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
||
3UTR CCA 72 bp | GATGATGTCGGGCTTTGGAATGCTCATACTGCTGCTTaGACTCATCCCACATTGCTCAGACCTTCCTTATGG | + |
Preference number: 3 (lower is better) Translates to: DDVGLWNAHTAA*THPTLLRPSLW Trigger: CCATAAGGAAGGTCTGAGCAATGTGGGATGAGTCCAAGCAGCAGTATGAGCATTCCAAAGCCCGACATCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
||
3UTR CCA 72 bp | AGCACAATGGGTCTATGTACACATGGACCATTCCCCTaGCATGCTTTAGAGAAAGACACATACACGCTCGCA | + |
Preference number: 3 (lower is better) Translates to: STMGLCTHGPFP*HALEKDTYTLA Trigger: TGCGAGCGTGTATGTGTCTTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
||
3UTR CCA 72 bp | TCACAACTACAGTGCAGGACAGTATCTACAGCACAATaGGTCTATGTACACATGGACCATTCCCCTGGCATG | + |
Preference number: 3 (lower is better) Translates to: SQLQCRTVSTAQ*VYVHMDHSPGM Trigger: CATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCTGTAGATACTGTCCTGCACTGTAGTTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
||
3UTR CCA 72 bp | CGAGGGTTGCTGTGGTACGCCAGGAAGCTAGCTCCGTaGATTTTCTTCAATTGCAAGAAGCAGATTTTTACC | + |
Preference number: 3 (lower is better) Translates to: RGLLWYARKLAP*IFFNCKKQIFT Trigger: GGTAAAAATCTGCTTCTTGCAATTGAAGAAAATCCACGGAGCTAGCTTCCTGGCGTACCACAGCAACCCTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR-3UTR CAA 90 bp | ATCAGAAGGTTTAGAGGTGGGAGAGACCATGAAGTGTCCTTTGAATTCTTGACTACACACGGCTCCTTTTaGCAGTGGGGCTCAGCCTTT | + |
Preference number: 3 (lower is better) Translates to: IRRFRGGRDHEVSFEFLTTHGSF*QWGSAF Trigger: AAAGGCTGAGCCCCACTGCAAAAAGGAGCCGTGTGT...AGTCAAGAATTCAAAGGACACTTCATGGTCTCTCCCACCTCTAAACCTTCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR-3UTR CAA 90 bp | CAAATACTTATGGAGCAGAACGTGGCCGAAGTTCACCAGGATGAACCGTGTTCAGGAACTGGAATTAACTaGCCTGTGTCAGCATCTCAC | + |
Preference number: 3 (lower is better) Translates to: QILMEQNVAEVHQDEPCSGTGIN*PVSASH Trigger: GTGAGATGCTGACACAGGCAAGTTAATTCCAGTTCC...TGAACACGGTTCATCCTGGTGAACTTCGGCCACGTTCTGCTCCATAAGTATTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR TCA 72 bp | AGATGTCACATGGTAGTCATCTCAGAGAGGACCCTGTaGCTGTGGGCTGAGAAGAAAGGACTTAAAAAGCAG | + |
Preference number: 3 (lower is better) Translates to: RCHMVVISERTL*LWAEKKGLKKQ Trigger: CTGCTTTTTAAGTCCTTTCTTCTCAGCCCACAGTCACAGGGTCCTCTCTGAGATGACTACCATGTGACATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR TCA 72 bp | CCCAAAGCAACAGCCCCATTTTCTTGGCTCCAATCCTaGTACACCTTTCATGTTACAGATGCCCTTTGTCCT | + |
Preference number: 3 (lower is better) Translates to: PKATAPFSWLQS*YTFHVTDALCP Trigger: AGGACAAAGGGCATCTGTAACATGAAAGGTGTATCAGGATTGGAGCCAAGAAAATGGGGCTGTTGCTTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR CCA 72 bp | GGACAGTATCTACAGCACAATGGGTCTATGTACACATaGACCATTCCCCTGGCATGCTTTAGAGAAAGACAC | + |
Preference number: 3 (lower is better) Translates to: GQYLQHNGSMYT*TIPLACFRERH Trigger: GTGTCTTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCTGTAGATACTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
||
3UTR-3UTR CAA 90 bp | CCCTGTCTGCTCACCCCATTGATAGTAGGCACTTTCATGTACAGTGATATTCTGGAGCACAGCTTGGTTTaGAATGCACACGGATATCAT | + |
Preference number: 3 (lower is better) Translates to: PCLLTPLIVGTFMYSDILEHSLV*NAHGYH Trigger: ATGATATCCGTGTGCATTCAAAACCAAGCTGTGCTC...CAGAATATCACTGTACATGAAAGTGCCTACTATCAATGGGGTGAGCAGACAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
||
3UTR-3UTR CAA 90 bp | TCTCAGAAAAGAGATACAGAACTGGTCCAGAGCCCCTGTGGTTCTAGAAGGTGCCAAATGCAGTGTTACTaGAAGATTAGTGAAGGGACA | + |
Preference number: 3 (lower is better) Translates to: SQKRDTELVQSPCGSRRCQMQCY*KISEGT Trigger: TGTCCCTTCACTAATCTTCAAGTAACACTGCATTTG...GCACCTTCTAGAACCACAGGGGCTCTGGACCAGTTCTGTATCTCTTTTCTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR TCA 72 bp | ACCCCAGAGCTTGTCCTTATAATAGGATGGGGACCCTaGAGGCCAGGTGCATTATCAAAGCTTATGATATGT | + |
Preference number: 3 (lower is better) Translates to: TPELVLIIGWGP*RPGALSKLMIC Trigger: ACATATCATAAGCTTTGATAATGCACCTGGCCTTCAGGGTCCCCATCCTATTATAAGGACAAGCTCTGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR TCA 72 bp | GGAGCAAAACCAAATTCCTTCTTGAGGTTCACTTGGTaGCATTTGAGCAGCAGAGCTAAATGCAAACGAGGG | + |
Preference number: 3 (lower is better) Translates to: GAKPNSFLRFTW*HLSSRAKCKRG Trigger: CCCTCGTTTGCATTTAGCTCTGCTGCTCAAATGTCACCAAGTGAACCTCAAGAAGGAATTTGGTTTTGCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR GCA 72 bp | CTGCCAACTTTCAGGGTCTTCTCTGATCTTCAGAAATaGTCCCTTTCCTACGATTCTACCTCTGCTGCAAAT | + |
Preference number: 3 (lower is better) Translates to: LPTFRVFSDLQK*SLSYDSTSAAN Trigger: ATTTGCAGCAGAGGTAGAATCGTAGGAAAGGGAGCATTTCTGAAGATCAGAGAAGACCCTGAAAGTTGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
||
3UTR GCA 72 bp | CTAAGCTTAACGCCAGCCACCTCACCAAGAAGAATGTaGTATACACTGGGAGCAAAACCAAATTCCTTCTTG | + |
Preference number: 3 (lower is better) Translates to: LSLTPATSPRRM*YTLGAKPNSFL Trigger: CAAGAAGGAATTTGGTTTTGCTCCCAGTGTATAGCACATTCTTCTTGGTGAGGTGGCTGGCGTTAAGCTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR GCA 72 bp | CCTTGGCTAGAAGAGCGTCTAAGTGTTCTGAGTGTCTaGTTCCTTTGGCTAAGGCAACACATTTGTAACCAT | + |
Preference number: 3 (lower is better) Translates to: PWLEERLSVLSV*FLWLRQHICNH Trigger: ATGGTTACAAATGTGTTGCCTTAGCCAAAGGAAGCAGACACTCAGAACACTTAGACGCTCTTCTAGCCAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR CCA 72 bp | GCAAAGGATATGGAATCCGTGAGTGTTCCTGGTTTATaGATGCAACCCCTTCACTCCATGCTACCTATTTGT | + |
Preference number: 3 (lower is better) Translates to: AKDMESVSVPGL*MQPLHSMLPIC Trigger: ACAAATAGGTAGCATGGAGTGAAGGGGTTGCATCCATAAACCAGGAACACTCACGGATTCCATATCCTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR CCA 72 bp | TTTGTATGCAAAGGATATGGAATCCGTGAGTGTTCCTaGTTTATGGATGCAACCCCTTCACTCCATGCTACC | + |
Preference number: 3 (lower is better) Translates to: FVCKGYGIRECS*FMDATPSLHAT Trigger: GGTAGCATGGAGTGAAGGGGTTGCATCCATAAACCAGGAACACTCACGGATTCCATATCCTTTGCATACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR CCA 72 bp | GAAGAGCGTCTAAGTGTTCTGAGTGTCTGCTTCCTTTaGCTAAGGCAACACATTTGTAACCATGTCAGGCTT | + |
Preference number: 3 (lower is better) Translates to: EERLSVLSVCFL*LRQHICNHVRL Trigger: AAGCCTGACATGGTTACAAATGTGTTGCCTTAGCCAAAGGAAGCAGACACTCAGAACACTTAGACGCTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR-3UTR CAA 90 bp | TACAGATGCCCTTTGTCCTTGGTAGATGAATGTAAGCCTCAGTGTGAAATCTCTCTTCTTGAGGTTCACTaGGTGACATTTGAGCAGCAG | + |
Preference number: 3 (lower is better) Translates to: YRCPLSLVDECKPQCEISLLEVH*VTFEQQ Trigger: CTGCTGCTCAAATGTCACCAAGTGAACCTCAAGAAG...AGAGATTTCACACTGAGGCTTACATTCATCTACCAAGGACAAAGGGCATCTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR TCA 72 bp | GCTACCCTCTTGGATAGGAATCCCCATCCTATCTCTTaGTCATCCATAAATACTTTTCTGCATCCTGAACCC | + |
Preference number: 3 (lower is better) Translates to: ATLLDRNPHPIS*SSINTFLHPEP Trigger: GGGTTCAGGATGCAGAAAAGTATTTATGGATGATCAAGAGATAGGATGGGGATTCCTATCCAAGAGGGTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR GCA 72 bp | TTGGCTCCAATCCTGATACACCTTTCATGTTACAGATaGCCTTTGTCCTTGGTAGATGAATGTAAGCCTCAG | + |
Preference number: 3 (lower is better) Translates to: LAPILIHLSCYR*PLSLVDECKPQ Trigger: CTGAGGCTTACATTCATCTACCAAGGACAAAGGGCATCTGTAACATGAAAGGTGTATCAGGATTGGAGCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR CCA 72 bp | CCAATATTACGAACAAGGCAGCCACCTCAGCTATTTTaGTGCCCTCGCTTTAATATGAAAATGCCTTTCCTC | + |
Preference number: 3 (lower is better) Translates to: PILRTRQPPQLF*CPRFNMKMPFL Trigger: GAGGAAAGGCATTTTCATATTAAAGCGAGGGCACCAAAATAGCTGAGGTGGCTGCCTTGTTCGTAATATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR-3UTR CAA 90 bp | TCCATTTCCTGGCCCTTACATTACCCCAGTTTCTTAAAGAGGCCACCACAAAAATGTAAATATTGCTGTTaGTGGAGACTGACCATCTCC | + |
Preference number: 3 (lower is better) Translates to: SISWPLHYPSFLKRPPQKCKYCC*WRLTIS Trigger: GGAGATGGTCAGTCTCCACAAACAGCAATATTTACA...TTTTTGTGGTGGCCTCTTTAAGAAACTGGGGTAATGTAAGGGCCAGGAAATGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
||
3UTR-3UTR CAA 90 bp | CACATTGCTCAGACCTTCCTTATGGTTAAGCAAATAGCTCAGCTTTCAGTGTTATGTCTGCTCACCCCATaGATAGTAGGCACTTTCATG | + |
Preference number: 3 (lower is better) Translates to: HIAQTFLMVKQIAQLSVLCLLTP*IVGTFM Trigger: CATGAAAGTGCCTACTATCAATGGGGTGAGCAGACA...TAACACTGAAAGCTGAGCTATTTGCTTAACCATAAGGAAGGTCTGAGCAATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
||
3UTR GCA 72 bp | GTTTTGATCACCAACTGCAAGGAGAACAGACAGTTCTaGAGTTGTAGAATCCAGGAAAGCTATCCTTCTTTG | + |
Preference number: 3 (lower is better) Translates to: VLITNCKENRQF*SCRIQESYPSL Trigger: CAAAGAAGGATAGCTTTCCTGGATTCTACAACTGCAGAACTGTCTGTTCTCCTTGCAGTTGGTGATCAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR GCA 72 bp | ATATTACGAACAAGGCAGCCACCTCAGCTATTTTGGTaGCCTCGCTTTAATATGAAAATGCCTTTCCTCTGT | + |
Preference number: 3 (lower is better) Translates to: ILRTRQPPQLFW*PRFNMKMPFLC Trigger: ACAGAGGAAAGGCATTTTCATATTAAAGCGAGGGCACCAAAATAGCTGAGGTGGCTGCCTTGTTCGTAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR GCA 72 bp | TACGCCAGGAAGCTAGCTCCGTGGATTTTCTTCAATTaGAAGAAGCAGATTTTTACCGTGCCTAGATATTAC | + |
Preference number: 3 (lower is better) Translates to: YARKLAPWIFFN*KKQIFTVPRYY Trigger: GTAATATCTAGGCACGGTAAAAATCTGCTTCTTGCAATTGAAGAAAATCCACGGAGCTAGCTTCCTGGCGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR CCA 72 bp | GGATGCTTCTATACAGTTTTAAGGGAAAGTAGCCACTaGTTTTCTAGCAAAGATAACCCACCACATGCAGAG | + |
Preference number: 3 (lower is better) Translates to: GCFYTVLRESSH*FSSKDNPPHAE Trigger: CTCTGCATGTGGTGGGTTATCTTTGCTAGAAAACCAGTGGCTACTTTCCCTTAAAACTGTATAGAAGCATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
||
3UTR CCA 72 bp | CCAGCATGTACTCTTCTAAGACTTTACTTAAGGATGTaGAGGGCTCTGAACATGGCAAACACATATCCTTCA | + |
Preference number: 3 (lower is better) Translates to: PACTLLRLYLRM*RALNMANTYPS Trigger: TGAAGGATATGTGTTTGCCATGTTCAGAGCCCTCCACATCCTTAAGTAAAGTCTTAGAAGAGTACATGCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR-3UTR CAA 90 bp | AGTGTTAGTGTGAAGAGGACTCTCACAGAGATAAGTCTAAACAGAGTAGGGAAGCATAAAGCGTTGGCCTaGAACTCAAGGATAAGAATC | + |
Preference number: 3 (lower is better) Translates to: SVSVKRTLTEISLNRVGKHKALA*NSRIRI Trigger: GATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATG...CTTCCCTACTCTGTTTAGACTTATCTCTGTGAGAGTCCTCTTCACACTAACACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
||
3UTR GCA 72 bp | AACCCTTCATCCTTTCTCAAGGTGAATCACTTTGGATaGTTCTATACAGTTTTAAGGGAAAGTAGCCACTGG | + |
Preference number: 3 (lower is better) Translates to: NPSSFLKVNHFG*FYTVLRESSHW Trigger: CCAGTGGCTACTTTCCCTTAAAACTGTATAGAAGCATCCAAAGTGATTCACCTTGAGAAAGGATGAAGGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
||
3UTR CCA 72 bp | ACAGCCATTTCAAAGGTTAGAAAACTTGATGTGCCATaGCTCTGTAAGGTAACATCACATTATGACCTCAGC | + |
Preference number: 3 (lower is better) Translates to: TAISKVRKLDVP*LCKVTSHYDLS Trigger: GCTGAGGTCATAATGTGATGTTACCTTACAGAGCCATGGCACATCAAGTTTTCTAACCTTTGAAATGGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
||
3UTR CCA 72 bp | CAGTGGATGGATTTTTCTGTCAATTGTATGACATCTTaGTGTAGGCCATCTGGCCTGATAGTGATTCTAATC | + |
Preference number: 3 (lower is better) Translates to: QWMDFSVNCMTS*CRPSGLIVILI Trigger: GATTAGAATCACTATCAGGCCAGATGGCCTACACCAAGATGTCATACAATTGACAGAAAAATCCATCCACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR-3UTR CAA 90 bp | TATGCATATAACACTGTTAATGAGGAGACGTCTAACCAAGAACAGGATTTATACTGGACTCATCCCACATaGCTCAGACCTTCCTTATGG | + |
Preference number: 3 (lower is better) Translates to: YAYNTVNEETSNQEQDLYWTHPT*LRPSLW Trigger: CCATAAGGAAGGTCTGAGCAATGTGGGATGAGTCCA...GTATAAATCCTGTTCTTGGTTAGACGTCTCCTCATTAACAGTGTTATATGCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR-3UTR CAA 90 bp | TGTTACAGATGCCCTTTGTCCTTGGTAGATGAATGTAAGCCTCAGTGTGAAATCTTCATATCATCTCTCTaGATGAGTCTGTCAGTCGTT | + |
Preference number: 3 (lower is better) Translates to: CYRCPLSLVDECKPQCEIFISSL*MSLSVV Trigger: AACGACTGACAGACTCATCAAGAGAGATGATATGAA...GATTTCACACTGAGGCTTACATTCATCTACCAAGGACAAAGGGCATCTGTAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR TCA 72 bp | AATGACCAGGAATTCTTTCCAAAGGAGATATTCCTCTaGCAAAACCCCAGAGCTTGTCCTTATAATAGGATG | + |
Preference number: 3 (lower is better) Translates to: NDQEFFPKEIFL*QNPRACPYNRM Trigger: CATCCTATTATAAGGACAAGCTCTGGGGTTTTGTCAGAGGAATATCTCCTTTGGAAAGAATTCCTGGTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR TCA 72 bp | AAGTTTTCTACAATATCCATAAACATTCCACTGGCGTaGATGCTAAATCTAAACCTAAGCTTAACGCCAGCC | + |
Preference number: 3 (lower is better) Translates to: KFSTISINIPLA*MLNLNLSLTPA Trigger: GGCTGGCGTTAAGCTTAGGTTTAGATTTAGCATTCACGCCAGTGGAATGTTTATGGATATTGTAGAAAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR TCA 72 bp | AGCCACCTCAGCTATTTTGGTGCCCTCGCTTTAATATaGAAATGCCTTTCCTCTGTATCTCTAAGAAATTTT | + |
Preference number: 3 (lower is better) Translates to: SHLSYFGALALI*KCLSSVSLRNF Trigger: AAAATTTCTTAGAGATACAGAGGAAAGGCATTTTCATATTAAAGCGAGGGCACCAAAATAGCTGAGGTGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR CCA 72 bp | ACTTCTAGAGAATCCTTGATTGCCAATGTATCATATTaGAATATGGCACCCCTTCCCTATGTATTACTAGCT | + |
Preference number: 3 (lower is better) Translates to: TSRESLIANVSY*NMAPLPYVLLA Trigger: AGCTAGTAATACATAGGGAAGGGGTGCCATATTCCAATATGATACATTGGCAATCAAGGATTCTCTAGAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR CCA 72 bp | AGGAGAGACATTCTTAAAAAGAATCTCAGATCTTGCTaGAGTTATGGGCAAACACCGCATTGTAAAAGAATC | + |
Preference number: 3 (lower is better) Translates to: RRDILKKNLRSC*SYGQTPHCKRI Trigger: GATTCTTTTACAATGCGGTGTTTGCCCATAACTCCAGCAAGATCTGAGATTCTTTTTAAGAATGTCTCTCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR CCA 72 bp | TCAAATGTAACACTGCTCTTACATTGTTATACAAACTaGCAGTTTACAGGGGAACCAAGACTAAATCTAGGC | + |
Preference number: 3 (lower is better) Translates to: SNVTLLLHCYTN*QFTGEPRLNLG Trigger: GCCTAGATTTAGTCTTGGTTCCCCTGTAAACTGCCAGTTTGTATAACAATGTAAGAGCAGTGTTACATTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR CCA 72 bp | GTAAGCCTCAGTGTGAAATCTCTTCCTACAATAGTCTaGTATGACATTCATATCATCTCTCTTGATGAGTCT | + |
Preference number: 3 (lower is better) Translates to: VSLSVKSLPTIV*YDIHIISLDES Trigger: AGACTCATCAAGAGAGATGATATGAATGTCATACCAGACTATTGTAGGAAGAGATTTCACACTGAGGCTTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR GCA 72 bp | GTTTTGTCTTATGAATGGCATAACTTTCACTTTGTATaGAAAGGATATGGAATCCGTGAGTGTTCCTGGTTT | + |
Preference number: 3 (lower is better) Translates to: VLSYEWHNFHFV*KGYGIRECSWF Trigger: AAACCAGGAACACTCACGGATTCCATATCCTTTGCATACAAAGTGAAAGTTATGCCATTCATAAGACAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
3UTR TCA 72 bp | TGTCACAGGTATCCATTTTTGGAAACTAATACTAAATaGTGCGGAATTAACTCACATTTCCTTATTCCCACT | + |
Preference number: 3 (lower is better) Translates to: CHRYPFLETNTK*CGINSHFLIPT Trigger: AGTGGGAATAAGGAAATGTGAGTTAATTCCGCATCATTTAGTATTAGTTTCCAAAAATGGATACCTGTGACA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR TCA 72 bp | CACTTGTTTGTATTCAGTACTTTGATTACCAACAAGTaGGATCAGTGGATGGATTTTTCTGTCAATTGTATG | + |
Preference number: 3 (lower is better) Translates to: HLFVFSTLITNK*DQWMDFSVNCM Trigger: CATACAATTGACAGAAAAATCCATCCACTGATCTCACTTGTTGGTAATCAAAGTACTGAATACAAACAAGTG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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CDS-3UTR GCA 90 bp | TGCCCCAGTGGCCTGGCTTGGGGTATTGACTGGCCTCTATGGGCAATGGTGCCAGCAGAACAGGGACGCTaGCAGCAGCCACAGTGGTAC | + |
Preference number: 4 (lower is better) Translates to: CPSGLAWGIDWPLWAMVPAEQGR*QQPQWY Trigger: GTACCACTGTGGCTGCTGGCAGCGTCCCTGTTCTGC...TGGCACCATTGCCCATAGAGGCCAGTCAATACCCCAAGCCAGGCCACTGGGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CCA 90 bp | CATGTGACGGCCATGAAAGGGGGAGGAATTCTGCTCCTGGCCTCCCACCCAGCCGTTCAGGGCGCCCATTaGCCATGCAGACCAGGGTTA | + |
Preference number: 4 (lower is better) Translates to: HVTAMKGGGILLLASHPAVQGAH*PCRPGL Trigger: TAACCCTGGTCTGCATGGCCAATGGGCGCCCTGAAC...GGCTGGGTGGGAGGCCAGGAGCAGAATTCCTCCCCCTTTCATGGCCGTCACATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR CAA 72 bp | CTGTGCCTAGGAAGGATCGATGGGACTGGGGAGGTGTaGGGTGGGCGGGTCTCTCTCCCCTTACAGAGTGTC | + |
Preference number: 4 (lower is better) Translates to: LCLGRIDGTGEV*GGRVSLPLQSV Trigger: GACACTCTGTAAGGGGAGAGAGACCCGCCCACCCAACACCTCCCCAGTCCCATCGATCCTTCCTAGGCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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CDS-3UTR TCA 90 bp | CCACCACATGCAGAGAGGCAGCCTTCCTGTAAGATGTCCCCTAGGCCAACTCTGCCCCCTGTCTCACGGTaGTGTTGTCCGTGCCTCGGT | + |
Preference number: 4 (lower is better) Translates to: PPHAERQPSCKMSPRPTLPPVSR*CCPCLG Trigger: ACCGAGGCACGGACAACATCACCGTGAGACAGGGGG...CAGAGTTGGCCTAGGGGACATCTTACAGGAAGGCTGCCTCTCTGCATGTGGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR TCA 90 bp | CAGAACAGGGACGCTGCCAGCAGCCACAGTGGTACGGCCAGACTGACGGATCCGCATAGTGTTCCTCAGTaGCATTGGTCACCGTCAGGG | + |
Preference number: 4 (lower is better) Translates to: QNRDAASSHSGTARLTDPHSVPQ*HWSPSG Trigger: CCCTGACGGTGACCAATGTCACTGAGGAACACTATG...CGGATCCGTCAGTCTGGCCGTACCACTGTGGCTGCTGGCAGCGTCCCTGTTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133853.3 |
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CDS-3UTR TCA 90 bp | AACAGGGACGCTGCCAGCAGCCACAGTGGTACGGCCAGACTGACGGATCCGTTGGTGGTGCCAATTTCTTaGATGGGGTGGGGGACTGTG | + |
Preference number: 4 (lower is better) Translates to: NRDAASSHSGTARLTDPLVVPIS*MGWGTV Trigger: CACAGTCCCCCACCCCATTCAAGAAATTGGCACCAC...CAACGGATCCGTCAGTCTGGCCGTACCACTGTGGCTGCTGGCAGCGTCCCTGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133853.3 |
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CDS-3UTR GCA 90 bp | GGGCTCCTCTTCCCTTGGTGGGGGAGGGGCCACCATTCAGATACCCACTTGTCTGGCGCCCATTGGCCATaGAGACCAGGGTTACATTGC | + |
Preference number: 4 (lower is better) Translates to: GLLFPWWGRGHHSDTHLSGAHWP*RPGLHC Trigger: GCAATGTAACCCTGGTCTGCATGGCCAATGGGCGCC...AGACAAGTGGGTATCTGAATGGTGGCCCCTCCCCCACCAAGGGAAGAGGAGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CCA 90 bp | CATGTGACGGCCATGAAAGGGGGAGGAATTCTGCTCCTGGCCTCCCACCCAGCCACCGTCAGGGAGGACTaGCCCTCAGTGCTCTTAATC | + |
Preference number: 4 (lower is better) Translates to: HVTAMKGGGILLLASHPATVRED*PSVLLI Trigger: GATTAAGAGCACTGAGGGCCAGTCCTCCCTGACGGT...GGCTGGGTGGGAGGCCAGGAGCAGAATTCCTCCCCCTTTCATGGCCGTCACATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR CAA 72 bp | CAGGTCTGCTTAGGGTCACCTTGGGCTCCTCTTCCCTaGGTGGGGGAGGGGCCACCATTCAGATACCCACTT | + |
Preference number: 4 (lower is better) Translates to: QVCLGSPWAPLP*VGEGPPFRYPL Trigger: AAGTGGGTATCTGAATGGTGGCCCCTCCCCCACCAAGGGAAGAGGAGCCCAAGGTGACCCTAAGCAGACCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR CAA 72 bp | AGTGCAATCAGTGCCCCAGTGGCCTGGCTTGGGGTATaGACTGGCCTCTATGGGCAATGGTGCCACGCGCAT | + |
Preference number: 4 (lower is better) Translates to: SAISAPVAWLGV*TGLYGQWCHAH Trigger: ATGCGCGTGGCACCATTGCCCATAGAGGCCAGTCAATACCCCAAGCCAGGCCACTGGGGCACTGATTGCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CCA 90 bp | GACGCTGCCAGCAGCCACAGTGGTACGGCCAGACTGACGGATCCGTTGATTCCTACCGTCAGGGAGGACTaGCCCTCAGTGCTCTTAATC | + |
Preference number: 4 (lower is better) Translates to: DAASSHSGTARLTDPLIPTVRED*PSVLLI Trigger: GATTAAGAGCACTGAGGGCCAGTCCTCCCTGACGGT...AGGAATCAACGGATCCGTCAGTCTGGCCGTACCACTGTGGCTGCTGGCAGCGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133853.3 |
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CDS-3UTR TCA 90 bp | GGGCTCCTCTTCCCTTGGTGGGGGAGGGGCCACCATTCAGATACCCACTTGTCTCTGAGGCTTCACATTTaGGGGAAGCTTGTCGTCCTG | + |
Preference number: 4 (lower is better) Translates to: GLLFPWWGRGHHSDTHLSLRLHI*GKLVVL Trigger: CAGGACGACAAGCTTCCCTCAAATGTGAAGCCTCAG...AGACAAGTGGGTATCTGAATGGTGGCCCCTCCCCCACCAAGGGAAGAGGAGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CCA 90 bp | GGGCTCCTCTTCCCTTGGTGGGGGAGGGGCCACCATTCAGATACCCACTTGTCTCTTGTCGTCCTGTGGTaGCTTCGTTGCTCTTCGACT | + |
Preference number: 4 (lower is better) Translates to: GLLFPWWGRGHHSDTHLSLVVLW*LRCSST Trigger: AGTCGAAGAGCAACGAAGCCACCACAGGACGACAAG...AGACAAGTGGGTATCTGAATGGTGGCCCCTCCCCCACCAAGGGAAGAGGAGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CCA 90 bp | CAGAACAGGGACGCTGCCAGCAGCCACAGTGGTACGGCCAGACTGACGGATCCGTTGCACTGTTTATCCTaGTGTCATCCCGGTACCACT | + |
Preference number: 4 (lower is better) Translates to: QNRDAASSHSGTARLTDPLHCLS*CHPGTT Trigger: AGTGGTACCGGGATGACACCAGGATAAACAGTGCAA...CGGATCCGTCAGTCTGGCCGTACCACTGTGGCTGCTGGCAGCGTCCCTGTTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133853.3 |
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3UTR CAA 72 bp | AGCAGCCACAGTGGTACGGCCAGACTGACGGATCCGTaGATTCCTCTCACCGACCCGGGTCCTGATGTCATT | + |
Preference number: 4 (lower is better) Translates to: SSHSGTARLTDP*IPLTDPGPDVI Trigger: AATGACATCAGGACCCGGGTCGGTGAGAGGAATCAACGGATCCGTCAGTCTGGCCGTACCACTGTGGCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133853.3 |
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CDS-3UTR TCA 90 bp | CATGTGACGGCCATGAAAGGGGGAGGAATTCTGCTCCTGGCCTCCCACCCAGCCCAACCAGGCCACTTTTaGGTTCTTGTCTTCTACCAC | + |
Preference number: 4 (lower is better) Translates to: HVTAMKGGGILLLASHPAQPGHF*VLVFYH Trigger: GTGGTAGAAGACAAGAACTCAAAAGTGGCCTGGTTG...GGCTGGGTGGGAGGCCAGGAGCAGAATTCCTCCCCCTTTCATGGCCGTCACATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR TCA 90 bp | CAGCCACAGTGGTACGGCCAGACTGACGGATCCGTTGATTCCTCTCACCGACCCTTTCACCTTTTGGCTTaGAGTGCACGGTGGTGCCAA | + |
Preference number: 4 (lower is better) Translates to: QPQWYGQTDGSVDSSHRPFHLLA*SARWCQ Trigger: TTGGCACCACCGTGCACTTCAAGCCAAAAGGTGAAA...GGGTCGGTGAGAGGAATCAACGGATCCGTCAGTCTGGCCGTACCACTGTGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133853.3 |
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CDS-3UTR CCA 90 bp | GACAAAGCAGGTCTGCTTAGGGTCACCTTGGGCTCCTCTTCCCTTGGTGGGGGACCGAGGAGACCTCGTTaGCAGCCTTGCACTCATATT | + |
Preference number: 4 (lower is better) Translates to: DKAGLLRVTLGSSSLGGGPRRPR*QPCTHI Trigger: AATATGAGTGCAAGGCTGCCAACGAGGTCTCCTCGG...TCCCCCACCAAGGGAAGAGGAGCCCAAGGTGACCCTAAGCAGACCTGCTTTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR TCA 90 bp | CAGCCACAGTGGTACGGCCAGACTGACGGATCCGTTGATTCCTCTCACCGACCCTGGGTAAAACACGCTTaGAAAGGACTAGGCTGGCAT | + |
Preference number: 4 (lower is better) Translates to: QPQWYGQTDGSVDSSHRPWVKHA*KGLGWH Trigger: ATGCCAGCCTAGTCCTTTTCAAGCGTGTTTTACCCA...GGGTCGGTGAGAGGAATCAACGGATCCGTCAGTCTGGCCGTACCACTGTGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133853.3 |
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CDS-3UTR GCA 90 bp | CAGCAACTCGTGACAGCCGCACCTCACAACTACAGTGCAGGACAGTATCTACAGGGCGCCCATTGGCCATaGAGACCAGGGTTACATTGC | + |
Preference number: 4 (lower is better) Translates to: QQLVTAAPHNYSAGQYLQGAHWP*RPGLHC Trigger: GCAATGTAACCCTGGTCTGCATGGCCAATGGGCGCC...CTGTAGATACTGTCCTGCACTGTAGTTGTGAGGTGCGGCTGTCACGAGTTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CCA 90 bp | CCACCACATGCAGAGAGGCAGCCTTCCTGTAAGATGTCCCCTAGGCCAACTCTGCCGAGGAGACCTCGTTaGCAGCCTTGCACTCATATT | + |
Preference number: 4 (lower is better) Translates to: PPHAERQPSCKMSPRPTLPRRPR*QPCTHI Trigger: AATATGAGTGCAAGGCTGCCAACGAGGTCTCCTCGG...CAGAGTTGGCCTAGGGGACATCTTACAGGAAGGCTGCCTCTCTGCATGTGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR CAA 72 bp | CCTTGGTGGGGGAGGGGCCACCATTCAGATACCCACTaGTCTCTGGAGATTTGCTCAATACACACGGCTCCT | + |
Preference number: 4 (lower is better) Translates to: PWWGRGHHSDTH*SLEICSIHTAP Trigger: AGGAGCCGTGTGTATTGAGCAAATCTCCAGAGACAAGTGGGTATCTGAATGGTGGCCCCTCCCCCACCAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR TCA 90 bp | GCAGGACAGTATCTACAGCACAATGGGTCTATGTACACATGGACCATTCCCCTGAGGTGCAGGCACCGCTaGGGCTTCACATTTGAGGGA | + |
Preference number: 4 (lower is better) Translates to: AGQYLQHNGSMYTWTIPLRCRHR*GFTFEG Trigger: TCCCTCAAATGTGAAGCCTCAGCGGTGCCTGCACCT...CAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCTGTAGATACTGTCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR TCA 90 bp | CCACCACATGCAGAGAGGCAGCCTTCCTGTAAGATGTCCCCTAGGCCAACTCTGTGCCAAGACTTGCAATaGGAAGAGGGACAGGAAGAA | + |
Preference number: 4 (lower is better) Translates to: PPHAERQPSCKMSPRPTLCQDLQ*EEGQEE Trigger: TTCTTCCTGTCCCTCTTCTCATTGCAAGTCTTGGCA...CAGAGTTGGCCTAGGGGACATCTTACAGGAAGGCTGCCTCTCTGCATGTGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187695.7 |
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CDS-3UTR GCA 90 bp | AGGGACGCTGCCAGCAGCCACAGTGGTACGGCCAGACTGACGGATCCGTTGATTAATCTCAAGGCCATTTaGACTGTTTATCCTGGTGTC | + |
Preference number: 4 (lower is better) Translates to: RDAASSHSGTARLTDPLINLKAI*TVYPGV Trigger: GACACCAGGATAAACAGTGCAAATGGCCTTGAGATT...AATCAACGGATCCGTCAGTCTGGCCGTACCACTGTGGCTGCTGGCAGCGTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133853.3 |
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CDS-3UTR GCA 90 bp | TGCCCCAGTGGCCTGGCTTGGGGTATTGACTGGCCTCTATGGGCAATGGTGCCAAATCTCAAGGCCATTTaGACTGTTTATCCTGGTGTC | + |
Preference number: 4 (lower is better) Translates to: CPSGLAWGIDWPLWAMVPNLKAI*TVYPGV Trigger: GACACCAGGATAAACAGTGCAAATGGCCTTGAGATT...TGGCACCATTGCCCATAGAGGCCAGTCAATACCCCAAGCCAGGCCACTGGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CCA 90 bp | GACAGCCGCACCTCACAACTACAGTGCAGGACAGTATCTACAGCACAATGGGTCCTGTATTCCAGAGCATaGCGCTTCTCCAGCTCAACC | + |
Preference number: 4 (lower is better) Translates to: DSRTSQLQCRTVSTAQWVLYSRA*RFSSST Trigger: GGTTGAGCTGGAGAAGCGCCATGCTCTGGAATACAG...GACCCATTGTGCTGTAGATACTGTCCTGCACTGTAGTTGTGAGGTGCGGCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CCA 90 bp | ACAAGACTCCAAGGTGGGGTCTCCTACATCCACACCTTTAAAAGGACTGATCCCGTTCAGGGCGCCCATTaGCCATGCAGACCAGGGTTA | + |
Preference number: 4 (lower is better) Translates to: TRLQGGVSYIHTFKRTDPVQGAH*PCRPGL Trigger: TAACCCTGGTCTGCATGGCCAATGGGCGCCCTGAAC...GGGATCAGTCCTTTTAAAGGTGTGGATGTAGGAGACCCCACCTTGGAGTCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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3UTR CAA 72 bp | CTCGCACACATGTACATCTACGTGAGAGCGAGAGACTaGAGCACACGCACGCGCACAGTGGAGAAGATGAAA | + |
Preference number: 4 (lower is better) Translates to: LAHMYIYVRARD*STRTRTVEKMK Trigger: TTTCATCTTCTCCACTGTGCGCGTGCGTGTGCTCAAGTCTCTCGCTCTCACGTAGATGTACATGTGTGCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR CAA 72 bp | GGGCCACCATTCAGATACCCACTTGTCTCTGGAGATTaGCTCAATACACACGGCTCCTTTTTGCAGTGGGGC | + |
Preference number: 4 (lower is better) Translates to: GPPFRYPLVSGD*LNTHGSFLQWG Trigger: GCCCCACTGCAAAAAGGAGCCGTGTGTATTGAGCAAATCTCCAGAGACAAGTGGGTATCTGAATGGTGGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR CAA 72 bp | GCTATCCTAGTCCTCTTTCTTTCCGTTTGCCTAGGGTaGGTTGGGTCAGGCTGGAGAATCTCCACTGAGGGA | + |
Preference number: 4 (lower is better) Translates to: AILVLFLSVCLG*VGSGWRISTEG Trigger: TCCCTCAGTGGAGATTCTCCAGCCTGACCCAACCAACCCTAGGCAAACGGAAAGAAAGAGGACTAGGATAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR CAA 72 bp | AGGAGTCCCTGCTATCCTAGTCCTCTTTCTTTCCGTTaGCCTAGGGTTGGTTGGGTCAGGCTGGAGAATCTC | + |
Preference number: 4 (lower is better) Translates to: RSPCYPSPLSFR*PRVGWVRLENL Trigger: GAGATTCTCCAGCCTGACCCAACCAACCCTAGGCAAACGGAAAGAAAGAGGACTAGGATAGCAGGGACTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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CDS-3UTR TCA 90 bp | GGGTCTCCTACATCCACACCTTTAAAAGGACTGATCCCTTCTCTGCCAACTTTCAGGTGCAGGCACCGCTaGGGCTTCACATTTGAGGGA | + |
Preference number: 4 (lower is better) Translates to: GSPTSTPLKGLIPSLPTFRCRHR*GFTFEG Trigger: TCCCTCAAATGTGAAGCCTCAGCGGTGCCTGCACCT...GAAAGTTGGCAGAGAAGGGATCAGTCCTTTTAAAGGTGTGGATGTAGGAGACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR TCA 90 bp | CAGGGGAGCCTGAGAAAGGCTCAACACAGGTTTCCGTTGATAGTCCAAAATGGCCATAGTGTTCCTCAGTaGCATTGGTCACCGTCAGGG | + |
Preference number: 4 (lower is better) Translates to: QGSLRKAQHRFPLIVQNGHSVPQ*HWSPSG Trigger: CCCTGACGGTGACCAATGTCACTGAGGAACACTATG...GCCATTTTGGACTATCAACGGAAACCTGTGTTGAGCCTTTCTCAGGCTCCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR GCA 90 bp | TTCATGTACAGTGATATTCTGAGTGACTCCCAGCTGGGTTCTGAAAATGAGACCGCAGAACAGGGACGCTaGCAGCAGCCACAGTGGTAC | + |
Preference number: 4 (lower is better) Translates to: FMYSDILSDSQLGSENETAEQGR*QQPQWY Trigger: GTACCACTGTGGCTGCTGGCAGCGTCCCTGTTCTGC...GGTCTCATTTTCAGAACCCAGCTGGGAGTCACTCAGAATATCACTGTACATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CCA 90 bp | AGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATGCTTTAGAGAAAGAACGGGCAGTCCTGTaGGAAGAAGGCAGAGCAGTC | + |
Preference number: 4 (lower is better) Translates to: STMGLCTHGPFPWHALEKERAVL*EEGRAV Trigger: GACTGCTCTGCCTTCTTCCCACAGGACTGCCCGTTC...TTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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CDS-3UTR CCA 90 bp | GCAGGACAGTATCTACAGCACAATGGGTCTATGTACACATGGACCATTCCCCTGAAGCTTGTCGTCCTGTaGTGGCTTCGTTGCTCTTCG | + |
Preference number: 4 (lower is better) Translates to: AGQYLQHNGSMYTWTIPLKLVVL*WLRCSS Trigger: CGAAGAGCAACGAAGCCACCACAGGACGACAAGCTT...CAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCTGTAGATACTGTCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CCA 90 bp | GGGTCTCCTACATCCACACCTTTAAAAGGACTGATCCCTTCTCTGCCAACTTTCACCGTCAGGGAGGACTaGCCCTCAGTGCTCTTAATC | + |
Preference number: 4 (lower is better) Translates to: GSPTSTPLKGLIPSLPTFTVRED*PSVLLI Trigger: GATTAAGAGCACTGAGGGCCAGTCCTCCCTGACGGT...GAAAGTTGGCAGAGAAGGGATCAGTCCTTTTAAAGGTGTGGATGTAGGAGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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3UTR CAA 72 bp | ATGGGGTCCTGCCCTCGAAAGGAGCACAGCTTGGTTTaGAATGCACACGGATATCATGTGACGGCCATGAAA | + |
Preference number: 4 (lower is better) Translates to: MGSCPRKEHSLV*NAHGYHVTAMK Trigger: TTTCATGGCCGTCACATGATATCCGTGTGCATTCAAAACCAAGCTGTGCTCCTTTCGAGGGCAGGACCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR CAA 72 bp | CGCGCATCAGCAGTGGGGCTGGAAGCCCATAAAGCGTaGGCCTTGAACTCAAGGATAAGAATCCATAAAGGA | + |
Preference number: 4 (lower is better) Translates to: RASAVGLEAHKA*ALNSRIRIHKG Trigger: TCCTTTATGGATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATGGGCTTCCAGCCCCACTGCTGATGCGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR TCA 90 bp | CACATTGCTCAGACCTTCCTTATGGTTAAGCAAATAGCTCAGCTTTCAGTGTTACCCCCTGTCTCACGGTaGTGTTGTCCGTGCCTCGGT | + |
Preference number: 4 (lower is better) Translates to: HIAQTFLMVKQIAQLSVLPPVSR*CCPCLG Trigger: ACCGAGGCACGGACAACATCACCGTGAGACAGGGGG...TAACACTGAAAGCTGAGCTATTTGCTTAACCATAAGGAAGGTCTGAGCAATGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CCA 90 bp | GACAGTATCTACAGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATAAGCTTGTCGTCCTGTaGTGGCTTCGTTGCTCTTCG | + |
Preference number: 4 (lower is better) Translates to: DSIYSTMGLCTHGPFPWHKLVVL*WLRCSS Trigger: CGAAGAGCAACGAAGCCACCACAGGACGACAAGCTT...ATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCTGTAGATACTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CCA 90 bp | TGTTACAGATGCCCTTTGTCCTTGGTAGATGAATGTAAGCCTCAGTGTGAAATCTGCCAGCAGCCACAGTaGTACGGCCAGACTGACGGA | + |
Preference number: 4 (lower is better) Translates to: CYRCPLSLVDECKPQCEICQQPQ*YGQTDG Trigger: TCCGTCAGTCTGGCCGTACCACTGTGGCTGCTGGCA...GATTTCACACTGAGGCTTACATTCATCTACCAAGGACAAAGGGCATCTGTAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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CDS-3UTR CCA 90 bp | GAAGCCCATAAAGCGTTGGCCTTGAACTCAAGGATAAGAATCCATAAAGGAGAATGCCAGCAGCCACAGTaGTACGGCCAGACTGACGGA | + |
Preference number: 4 (lower is better) Translates to: EAHKALALNSRIRIHKGECQQPQ*YGQTDG Trigger: TCCGTCAGTCTGGCCGTACCACTGTGGCTGCTGGCA...TTCTCCTTTATGGATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATGGGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR CAA 72 bp | CAGGGGAGCCTGAGAAAGGCTCAACACAGGTTTCCGTaGATAGTCCAAAATGGCGACACATCAGCTCAAATG | + |
Preference number: 4 (lower is better) Translates to: QGSLRKAQHRFP*IVQNGDTSAQM Trigger: CATTTGAGCTGATGTGTCGCCATTTTGGACTATCAACGGAAACCTGTGTTGAGCCTTTCTCAGGCTCCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR TCA 90 bp | GGTTTTGCAGACTCTCAGATTTATAATTTGAACCTAGGGTTTGCCTATATCCCTCCCCCTGTCTCACGGTaGTGTTGTCCGTGCCTCGGT | + |
Preference number: 4 (lower is better) Translates to: GFADSQIYNLNLGFAYIPPPVSR*CCPCLG Trigger: ACCGAGGCACGGACAACATCACCGTGAGACAGGGGG...AGGGATATAGGCAAACCCTAGGTTCAAATTATAAATCTGAGAGTCTGCAAAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR TCA 90 bp | ATCTACAGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATGCTTTATGCCCTCATTCACAGTaGCATCCGAGGAGATGTTGG | + |
Preference number: 4 (lower is better) Translates to: IYSTMGLCTHGPFPWHALCPHSQ*HPRRCW Trigger: CCAACATCTCCTCGGATGTCACTGTGAATGAGGGCA...TAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCTGTAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR TCA 90 bp | AGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATGCTTTAGAGAAACTGACTGTTCCCTGGTaGTGCCTAGGATCTCCAGAT | + |
Preference number: 4 (lower is better) Translates to: STMGLCTHGPFPWHALEKLTVPW*CLGSPD Trigger: ATCTGGAGATCCTAGGCATCACCAGGGAACAGTCAG...TTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR TCA 90 bp | CGGCTCCTTTTTGCAGTGGGGCTCAGCCTTTATAAAGCTATGAAACTGATGGATGCACTCATATTTGCCTaGCTGTTCCCTGGTGATGCC | + |
Preference number: 4 (lower is better) Translates to: RLLFAVGLSLYKAMKLMDALIFA*LFPGDA Trigger: GGCATCACCAGGGAACAGTCAGGCAAATATGAGTGC...ATCCATCAGTTTCATAGCTTTATAAAGGCTGAGCCCCACTGCAAAAAGGAGCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR TCA 90 bp | AGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATGCTTTAGAGAAACTGAGGCTTCACATTTaGGGGAAGCTTGTCGTCCTG | + |
Preference number: 4 (lower is better) Translates to: STMGLCTHGPFPWHALEKLRLHI*GKLVVL Trigger: CAGGACGACAAGCTTCCCTCAAATGTGAAGCCTCAG...TTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR TCA 90 bp | TGTTACAGATGCCCTTTGTCCTTGGTAGATGAATGTAAGCCTCAGTGTGAAATCAGGTGCAGGCACCGCTaGGGCTTCACATTTGAGGGA | + |
Preference number: 4 (lower is better) Translates to: CYRCPLSLVDECKPQCEIRCRHR*GFTFEG Trigger: TCCCTCAAATGTGAAGCCTCAGCGGTGCCTGCACCT...GATTTCACACTGAGGCTTACATTCATCTACCAAGGACAAAGGGCATCTGTAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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CDS-3UTR CCA 90 bp | CGGCTCCTTTTTGCAGTGGGGCTCAGCCTTTATAAAGCTATGAAACTGATGGATCTTGTCGTCCTGTGGTaGCTTCGTTGCTCTTCGACT | + |
Preference number: 4 (lower is better) Translates to: RLLFAVGLSLYKAMKLMDLVVLW*LRCSST Trigger: AGTCGAAGAGCAACGAAGCCACCACAGGACGACAAG...ATCCATCAGTTTCATAGCTTTATAAAGGCTGAGCCCCACTGCAAAAAGGAGCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR GCA 90 bp | AAACATTCTGTCTACCCTTCCTCTTGTGCTAGGAGAAACATTTTCCTTTTCCAGGGCGCCCATTGGCCATaGAGACCAGGGTTACATTGC | + |
Preference number: 4 (lower is better) Translates to: KHSVYPSSCARRNIFLFQGAHWP*RPGLHC Trigger: GCAATGTAACCCTGGTCTGCATGGCCAATGGGCGCC...CTGGAAAAGGAAAATGTTTCTCCTAGCACAAGAGGAAGGGTAGACAGAATGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR GCA 90 bp | CGGCTCCTTTTTGCAGTGGGGCTCAGCCTTTATAAAGCTATGAAACTGATGGATCCTCGTTGGCAGCCTTaGACTCATATTTGCCTGACT | + |
Preference number: 4 (lower is better) Translates to: RLLFAVGLSLYKAMKLMDPRWQP*THICLT Trigger: AGTCAGGCAAATATGAGTGCAAGGCTGCCAACGAGG...ATCCATCAGTTTCATAGCTTTATAAAGGCTGAGCCCCACTGCAAAAAGGAGCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CCA 90 bp | AAACATTCTGTCTACCCTTCCTCTTGTGCTAGGAGAAACATTTTCCTTTTCCAGGAACGGGCAGTCCTGTaGGAAGAAGGCAGAGCAGTC | + |
Preference number: 4 (lower is better) Translates to: KHSVYPSSCARRNIFLFQERAVL*EEGRAV Trigger: GACTGCTCTGCCTTCTTCCCACAGGACTGCCCGTTC...CTGGAAAAGGAAAATGTTTCTCCTAGCACAAGAGGAAGGGTAGACAGAATGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR CCA 90 bp | CAGCAACTCGTGACAGCCGCACCTCACAACTACAGTGCAGGACAGTATCTACAGGATGTTGGAGATCTTTaGTGGAACTTGTACGATCAA | + |
Preference number: 4 (lower is better) Translates to: QQLVTAAPHNYSAGQYLQDVGDL*WNLYDQ Trigger: TTGATCGTACAAGTTCCACCAAAGATCTCCAACATC...CTGTAGATACTGTCCTGCACTGTAGTTGTGAGGTGCGGCTGTCACGAGTTGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CCA 90 bp | TCCATTTCCTGGCCCTTACATTACCCCAGTTTCTTAAAGAGGCCACCACAAAAACCGAGGAGACCTCGTTaGCAGCCTTGCACTCATATT | + |
Preference number: 4 (lower is better) Translates to: SISWPLHYPSFLKRPPQKPRRPR*QPCTHI Trigger: AATATGAGTGCAAGGCTGCCAACGAGGTCTCCTCGG...TTTTTGTGGTGGCCTCTTTAAGAAACTGGGGTAATGTAAGGGCCAGGAAATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR CCA 90 bp | GAACAAGACTCCAAGGTGGGGTCTCCTACATCCACACCTTTAAAAGGACTGATCTTGCACTGTTTATCCTaGTGTCATCCCGGTACCACT | + |
Preference number: 4 (lower is better) Translates to: EQDSKVGSPTSTPLKGLILHCLS*CHPGTT Trigger: AGTGGTACCGGGATGACACCAGGATAAACAGTGCAA...GATCAGTCCTTTTAAAGGTGTGGATGTAGGAGACCCCACCTTGGAGTCTTGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR CCA 90 bp | GACAGTATCTACAGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATTTGCACTGTTTATCCTaGTGTCATCCCGGTACCACT | + |
Preference number: 4 (lower is better) Translates to: DSIYSTMGLCTHGPFPWHLHCLS*CHPGTT Trigger: AGTGGTACCGGGATGACACCAGGATAAACAGTGCAA...ATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCTGTAGATACTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CCA 90 bp | GACAGTATCTACAGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATACTTCAGCAGGAGGCTaGTTCCAAAATGCCAAGACT | + |
Preference number: 4 (lower is better) Translates to: DSIYSTMGLCTHGPFPWHTSAGG*FQNAKT Trigger: AGTCTTGGCATTTTGGAACCAGCCTCCTGCTGAAGT...ATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCTGTAGATACTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187695.7 |
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CDS-3UTR TCA 90 bp | GAAGCCCATAAAGCGTTGGCCTTGAACTCAAGGATAAGAATCCATAAAGGAGAATGCCCTCATTCACAGTaGCATCCGAGGAGATGTTGG | + |
Preference number: 4 (lower is better) Translates to: EAHKALALNSRIRIHKGECPHSQ*HPRRCW Trigger: CCAACATCTCCTCGGATGTCACTGTGAATGAGGGCA...TTCTCCTTTATGGATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATGGGCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CCA 90 bp | GAAGCCCATAAAGCGTTGGCCTTGAACTCAAGGATAAGAATCCATAAAGGAGAACTGTATTCCAGAGCATaGCGCTTCTCCAGCTCAACC | + |
Preference number: 4 (lower is better) Translates to: EAHKALALNSRIRIHKGELYSRA*RFSSST Trigger: GGTTGAGCTGGAGAAGCGCCATGCTCTGGAATACAG...TTCTCCTTTATGGATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATGGGCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CCA 90 bp | AGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATGCTTTAGAGAAAAAACTTGGGAGGTCTTaGGCTCATGCTGTGTCTGAA | + |
Preference number: 4 (lower is better) Translates to: STMGLCTHGPFPWHALEKKLGRS*AHAVSE Trigger: TTCAGACACAGCATGAGCCCAAGACCTCCCAAGTTT...TTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CCA 90 bp | CAAGAAACCAGTAACCCAGGCCCAGGAGTCCCTGCTATCCTAGTCCTCTTTCTTGTTGGAGATCTTTGGTaGAACTTGTACGATCAAGTA | + |
Preference number: 4 (lower is better) Translates to: QETSNPGPGVPAILVLFLVGDLW*NLYDQV Trigger: TACTTGATCGTACAAGTTCCACCAAAGATCTCCAAC...AAGAAAGAGGACTAGGATAGCAGGGACTCCTGGGCCTGGGTTACTGGTTTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR CAA 72 bp | AACAAGGTTGTGGGATTACAGATATTACTGAGCCTGTaGCCCATGAACAAGACTCCAAGGTGGGGTCTCCTA | + |
Preference number: 4 (lower is better) Translates to: NKVVGLQILLSL*PMNKTPRWGLL Trigger: TAGGAGACCCCACCTTGGAGTCTTGTTCATGGGCAACAGGCTCAGTAATATCTGTAATCCCACAACCTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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3UTR CAA 72 bp | TCAGCAGTGGGGCTGGAAGCCCATAAAGCGTTGGCCTaGAACTCAAGGATAAGAATCCATAAAGGAGAACAA | + |
Preference number: 4 (lower is better) Translates to: SAVGLEAHKALA*NSRIRIHKGEQ Trigger: TTGTTCTCCTTTATGGATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATGGGCTTCCAGCCCCACTGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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3UTR CAA 72 bp | TTGTGTGGCGAGACCCAAAGCAACAGCCCCATTTTCTaGGCTCCAATCCTGATACACCTTTCATGTTACAGA | + |
Preference number: 4 (lower is better) Translates to: LCGETQSNSPIF*APILIHLSCYR Trigger: TCTGTAACATGAAAGGTGTATCAGGATTGGAGCCAAGAAAATGGGGCTGTTGCTTTGGGTCTCGCCACACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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CDS-3UTR TCA 90 bp | TCCATTTCCTGGCCCTTACATTACCCCAGTTTCTTAAAGAGGCCACCACAAAAAATGCTGTGTCTGAACTaGGCATGTGTAGGATCCTTC | + |
Preference number: 4 (lower is better) Translates to: SISWPLHYPSFLKRPPQKMLCLN*ACVGSF Trigger: GAAGGATCCTACACATGCTCAGTTCAGACACAGCAT...TTTTTGTGGTGGCCTCTTTAAGAAACTGGGGTAATGTAAGGGCCAGGAAATGGA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR TCA 90 bp | CACATTGCTCAGACCTTCCTTATGGTTAAGCAAATAGCTCAGCTTTCAGTGTTACTGACTGTTCCCTGGTaGTGCCTAGGATCTCCAGAT | + |
Preference number: 4 (lower is better) Translates to: HIAQTFLMVKQIAQLSVLLTVPW*CLGSPD Trigger: ATCTGGAGATCCTAGGCATCACCAGGGAACAGTCAG...TAACACTGAAAGCTGAGCTATTTGCTTAACCATAAGGAAGGTCTGAGCAATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR TCA 90 bp | CAAGGGTATGGTGAGTATTGTCTCCAGTTGGAGCAAAGACTTTTCACATTTAGTGCACTCATATTTGCCTaGCTGTTCCCTGGTGATGCC | + |
Preference number: 4 (lower is better) Translates to: QGYGEYCLQLEQRLFTFSALIFA*LFPGDA Trigger: GGCATCACCAGGGAACAGTCAGGCAAATATGAGTGC...ACTAAATGTGAAAAGTCTTTGCTCCAACTGGAGACAATACTCACCATACCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR TCA 90 bp | CTCAGCAATAACCCTTCATCCTTTCTCAAGGTGAATCACTTTGGATGCTTCTATCATAGTGTTCCTCAGTaGCATTGGTCACCGTCAGGG | + |
Preference number: 4 (lower is better) Translates to: LSNNPSSFLKVNHFGCFYHSVPQ*HWSPSG Trigger: CCCTGACGGTGACCAATGTCACTGAGGAACACTATG...ATAGAAGCATCCAAAGTGATTCACCTTGAGAAAGGATGAAGGGTTATTGCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CCA 90 bp | CAAGGGTATGGTGAGTATTGTCTCCAGTTGGAGCAAAGACTTTTCACATTTAGTCTGTATTCCAGAGCATaGCGCTTCTCCAGCTCAACC | + |
Preference number: 4 (lower is better) Translates to: QGYGEYCLQLEQRLFTFSLYSRA*RFSSST Trigger: GGTTGAGCTGGAGAAGCGCCATGCTCTGGAATACAG...ACTAAATGTGAAAAGTCTTTGCTCCAACTGGAGACAATACTCACCATACCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR TCA 90 bp | GAAGCCCATAAAGCGTTGGCCTTGAACTCAAGGATAAGAATCCATAAAGGAGAAATGCTGTGTCTGAACTaGGCATGTGTAGGATCCTTC | + |
Preference number: 4 (lower is better) Translates to: EAHKALALNSRIRIHKGEMLCLN*ACVGSF Trigger: GAAGGATCCTACACATGCTCAGTTCAGACACAGCAT...TTCTCCTTTATGGATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATGGGCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR TCA 90 bp | GGTTTTGCAGACTCTCAGATTTATAATTTGAACCTAGGGTTTGCCTATATCCCTTGCCCTCATTCACAGTaGCATCCGAGGAGATGTTGG | + |
Preference number: 4 (lower is better) Translates to: GFADSQIYNLNLGFAYIPCPHSQ*HPRRCW Trigger: CCAACATCTCCTCGGATGTCACTGTGAATGAGGGCA...AGGGATATAGGCAAACCCTAGGTTCAAATTATAAATCTGAGAGTCTGCAAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR TCA 90 bp | GGTTTTGCAGACTCTCAGATTTATAATTTGAACCTAGGGTTTGCCTATATCCCTCTGACTGTTCCCTGGTaGTGCCTAGGATCTCCAGAT | + |
Preference number: 4 (lower is better) Translates to: GFADSQIYNLNLGFAYIPLTVPW*CLGSPD Trigger: ATCTGGAGATCCTAGGCATCACCAGGGAACAGTCAG...AGGGATATAGGCAAACCCTAGGTTCAAATTATAAATCTGAGAGTCTGCAAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR TCA 90 bp | AGAGGAGAGACATTCTTAAAAAGAATCTCAGATCTTGCTGGAGTTATGGGCAAAGCACTCATATTTGCCTaGCTGTTCCCTGGTGATGCC | + |
Preference number: 4 (lower is better) Translates to: RGETFLKRISDLAGVMGKALIFA*LFPGDA Trigger: GGCATCACCAGGGAACAGTCAGGCAAATATGAGTGC...TTTGCCCATAACTCCAGCAAGATCTGAGATTCTTTTTAAGAATGTCTCTCCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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CDS-3UTR CCA 90 bp | TATGCATATAACACTGTTAATGAGGAGACGTCTAACCAAGAACAGGATTTATACGTTCAGGGCGCCCATTaGCCATGCAGACCAGGGTTA | + |
Preference number: 4 (lower is better) Translates to: YAYNTVNEETSNQEQDLYVQGAH*PCRPGL Trigger: TAACCCTGGTCTGCATGGCCAATGGGCGCCCTGAAC...GTATAAATCCTGTTCTTGGTTAGACGTCTCCTCATTAACAGTGTTATATGCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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CDS-3UTR CCA 90 bp | ACGATTCTACCTCTGCTGCAAATGGTGAATCAGCAATGTAAACTTACTGTCATACTTGTCGTCCTGTGGTaGCTTCGTTGCTCTTCGACT | + |
Preference number: 4 (lower is better) Translates to: TILPLLQMVNQQCKLTVILVVLW*LRCSST Trigger: AGTCGAAGAGCAACGAAGCCACCACAGGACGACAAG...TATGACAGTAAGTTTACATTGCTGATTCACCATTTGCAGCAGAGGTAGAATCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR CCA 90 bp | TCTGTCTCTCAGGGACATTTGAATCTAGAATTATATCTACCTGACCAACAAGGTAAGCTTGTCGTCCTGTaGTGGCTTCGTTGCTCTTCG | + |
Preference number: 4 (lower is better) Translates to: SVSQGHLNLELYLPDQQGKLVVL*WLRCSS Trigger: CGAAGAGCAACGAAGCCACCACAGGACGACAAGCTT...ACCTTGTTGGTCAGGTAGATATAATTCTAGATTCAAATGTCCCTGAGAGACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR CCA 90 bp | ATCAGAAGGTTTAGAGGTGGGAGAGACCATGAAGTGTCCTTTGAATTCTTGACTTTGCACTGTTTATCCTaGTGTCATCCCGGTACCACT | + |
Preference number: 4 (lower is better) Translates to: IRRFRGGRDHEVSFEFLTLHCLS*CHPGTT Trigger: AGTGGTACCGGGATGACACCAGGATAAACAGTGCAA...AGTCAAGAATTCAAAGGACACTTCATGGTCTCTCCCACCTCTAAACCTTCTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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CDS-3UTR CCA 90 bp | GACAGTATCTACAGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATTCCTGGGATTGTGATTaGAGACAAATTTACTTCAGC | + |
Preference number: 4 (lower is better) Translates to: DSIYSTMGLCTHGPFPWHSWDCD*RQIYFS Trigger: GCTGAAGTAAATTTGTCTCCAATCACAATCCCAGGA...ATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCTGTAGATACTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187695.7 |
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3UTR CAA 72 bp | TTCTGCAGTTGTAGAATCCAGGAAAGCTATCCTTCTTaGGGGCCTGCCCTAGGTCAAGGTAATTTCTACTTT | + |
Preference number: 4 (lower is better) Translates to: FCSCRIQESYPS*GPALGQGNFYF Trigger: AAAGTAGAAATTACCTTGACCTAGGGCAGGCCCCAAAGAAGGATAGCTTTCCTGGATTCTACAACTGCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR CAA 72 bp | ACAAGAAAAATGTGCCTCTCACGAGGCAAAGTTGTTTaGATCACCAACTGCAAGGAGAACAGACAGTTCTGC | + |
Preference number: 4 (lower is better) Translates to: TRKMCLSRGKVV*ITNCKENRQFC Trigger: GCAGAACTGTCTGTTCTCCTTGCAGTTGGTGATCAAAACAACTTTGCCTCGTGAGAGGCACATTTTTCTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
CDS-3UTR GCA 90 bp | GAAGCCCATAAAGCGTTGGCCTTGAACTCAAGGATAAGAATCCATAAAGGAGAACAAAATGCCAAGACTTaGAATGAGAAGAGGGACAGG | + |
Preference number: 4 (lower is better) Translates to: EAHKALALNSRIRIHKGEQNAKT*NEKRDR Trigger: CCTGTCCCTCTTCTCATTGCAAGTCTTGGCATTTTG...TTCTCCTTTATGGATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATGGGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187695.7 |
||
CDS-3UTR CCA 90 bp | GGTATGGTGAGTATTGTCTCCAGTTGGAGCAAAGACTTTTCACATTTAGTCGTTAAACTTGGGAGGTCTTaGGCTCATGCTGTGTCTGAA | + |
Preference number: 4 (lower is better) Translates to: GMVSIVSSWSKDFSHLVVKLGRS*AHAVSE Trigger: TTCAGACACAGCATGAGCCCAAGACCTCCCAAGTTT...AACGACTAAATGTGAAAAGTCTTTGCTCCAACTGGAGACAATACTCACCATACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
||
CDS-3UTR CCA 90 bp | CGGCTCCTTTTTGCAGTGGGGCTCAGCCTTTATAAAGCTATGAAACTGATGGATGATGTTGGAGATCTTTaGTGGAACTTGTACGATCAA | + |
Preference number: 4 (lower is better) Translates to: RLLFAVGLSLYKAMKLMDDVGDL*WNLYDQ Trigger: TTGATCGTACAAGTTCCACCAAAGATCTCCAACATC...ATCCATCAGTTTCATAGCTTTATAAAGGCTGAGCCCCACTGCAAAAAGGAGCCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CCA 90 bp | GAACAAGACTCCAAGGTGGGGTCTCCTACATCCACACCTTTAAAAGGACTGATCTTTACCTTTAAGGGATaGCGGATAGATTTCAAGTCA | + |
Preference number: 4 (lower is better) Translates to: EQDSKVGSPTSTPLKGLIFTFKG*RIDFKS Trigger: TGACTTGAAATCTATCCGCCATCCCTTAAAGGTAAA...GATCAGTCCTTTTAAAGGTGTGGATGTAGGAGACCCCACCTTGGAGTCTTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
||
3UTR CAA 72 bp | CTTTATAAAGCTATGAAACTGATGGATTCTCCAGGCTaGCACACTGAGAGTGAAATCAGCGACCATCTTCCT | + |
Preference number: 4 (lower is better) Translates to: LYKAMKLMDSPG*HTESEISDHLP Trigger: AGGAAGATGGTCGCTGATTTCACTCTCAGTGTGCAAGCCTGGAGAATCCATCAGTTTCATAGCTTTATAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
||
CDS-3UTR TCA 90 bp | AATAGTTCTTCTATTTGTAAATATTGCTGTTTGTGGAGACTGACCATCTCCACTCTGAGGCTTCACATTTaGGGGAAGCTTGTCGTCCTG | + |
Preference number: 4 (lower is better) Translates to: NSSSICKYCCLWRLTISTLRLHI*GKLVVL Trigger: CAGGACGACAAGCTTCCCTCAAATGTGAAGCCTCAG...AGTGGAGATGGTCAGTCTCCACAAACAGCAATATTTACAAATAGAAGAACTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
||
CDS-3UTR TCA 90 bp | AATAGTTCTTCTATTTGTAAATATTGCTGTTTGTGGAGACTGACCATCTCCACTCATAGTGTTCCTCAGTaGCATTGGTCACCGTCAGGG | + |
Preference number: 4 (lower is better) Translates to: NSSSICKYCCLWRLTISTHSVPQ*HWSPSG Trigger: CCCTGACGGTGACCAATGTCACTGAGGAACACTATG...AGTGGAGATGGTCAGTCTCCACAAACAGCAATATTTACAAATAGAAGAACTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
||
CDS-3UTR CCA 90 bp | AGAGGAGAGACATTCTTAAAAAGAATCTCAGATCTTGCTGGAGTTATGGGCAAAAAACTTGGGAGGTCTTaGGCTCATGCTGTGTCTGAA | + |
Preference number: 4 (lower is better) Translates to: RGETFLKRISDLAGVMGKKLGRS*AHAVSE Trigger: TTCAGACACAGCATGAGCCCAAGACCTCCCAAGTTT...TTTGCCCATAACTCCAGCAAGATCTGAGATTCTTTTTAAGAATGTCTCTCCTCT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
CDS-3UTR CCA 90 bp | CCTTTAAAAGGACTGATCCCTTCTCTGCCAACTTTCAGGGTCTTCTCTGATCTTGTTGGAGATCTTTGGTaGAACTTGTACGATCAAGTA | + |
Preference number: 4 (lower is better) Translates to: PLKGLIPSLPTFRVFSDLVGDLW*NLYDQV Trigger: TACTTGATCGTACAAGTTCCACCAAAGATCTCCAAC...AAGATCAGAGAAGACCCTGAAAGTTGGCAGAGAAGGGATCAGTCCTTTTAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
||
3UTR CAA 72 bp | CCAATTAAGGGCATTATGGAGCAAATGCAGTGTTACTaGAAGATTAGTGAAGGGACAAAGCAGGTCTGCTTA | + |
Preference number: 4 (lower is better) Translates to: PIKGIMEQMQCY*KISEGTKQVCL Trigger: TAAGCAGACCTGCTTTGTCCCTTCACTAATCTTCAAGTAACACTGCATTTGCTCCATAATGCCCTTAATTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
||
3UTR CAA 72 bp | CTGATACACCTTTCATGTTACAGATGCCCTTTGTCCTaGGTAGATGAATGTAAGCCTCAGTGTGAAATCTCT | + |
Preference number: 4 (lower is better) Translates to: LIHLSCYRCPLS*VDECKPQCEIS Trigger: AGAGATTTCACACTGAGGCTTACATTCATCTACCAAGGACAAAGGGCATCTGTAACATGAAAGGTGTATCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
||
CDS-3UTR TCA 90 bp | GTAGGTTTTGCAGACTCTCAGATTTATAATTTGAACCTAGGGTTTGCCTATATCCAACCAGGCCACTTTTaGGTTCTTGTCTTCTACCAC | + |
Preference number: 4 (lower is better) Translates to: VGFADSQIYNLNLGFAYIQPGHF*VLVFYH Trigger: GTGGTAGAAGACAAGAACTCAAAAGTGGCCTGGTTG...GATATAGGCAAACCCTAGGTTCAAATTATAAATCTGAGAGTCTGCAAAACCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR GCA 90 bp | AATAGTTCTTCTATTTGTAAATATTGCTGTTTGTGGAGACTGACCATCTCCACTCCTCGTTGGCAGCCTTaGACTCATATTTGCCTGACT | + |
Preference number: 4 (lower is better) Translates to: NSSSICKYCCLWRLTISTPRWQP*THICLT Trigger: AGTCAGGCAAATATGAGTGCAAGGCTGCCAACGAGG...AGTGGAGATGGTCAGTCTCCACAAACAGCAATATTTACAAATAGAAGAACTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
||
CDS-3UTR GCA 90 bp | TCCATTTCCTGGCCCTTACATTACCCCAGTTTCTTAAAGAGGCCACCACAAAAAGATTTCAAGTCAATATaGAGGAACTCTATGACTTGC | + |
Preference number: 4 (lower is better) Translates to: SISWPLHYPSFLKRPPQKDFKSI*RNSMTC Trigger: GCAAGTCATAGAGTTCCTGCATATTGACTTGAAATC...TTTTTGTGGTGGCCTCTTTAAGAAACTGGGGTAATGTAAGGGCCAGGAAATGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR CCA 90 bp | AGTGTTAGTGTGAAGAGGACTCTCACAGAGATAAGTCTAAACAGAGTAGGGAAGGTTGGAGATCTTTGGTaGAACTTGTACGATCAAGTA | + |
Preference number: 4 (lower is better) Translates to: SVSVKRTLTEISLNRVGKVGDLW*NLYDQV Trigger: TACTTGATCGTACAAGTTCCACCAAAGATCTCCAAC...CTTCCCTACTCTGTTTAGACTTATCTCTGTGAGAGTCCTCTTCACACTAACACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR TCA 90 bp | TATGCATATAACACTGTTAATGAGGAGACGTCTAACCAAGAACAGGATTTATACATGCTGTGTCTGAACTaGGCATGTGTAGGATCCTTC | + |
Preference number: 4 (lower is better) Translates to: YAYNTVNEETSNQEQDLYMLCLN*ACVGSF Trigger: GAAGGATCCTACACATGCTCAGTTCAGACACAGCAT...GTATAAATCCTGTTCTTGGTTAGACGTCTCCTCATTAACAGTGTTATATGCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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CDS-3UTR TCA 90 bp | GGTTTTGCAGACTCTCAGATTTATAATTTGAACCTAGGGTTTGCCTATATCCCTTTTTGGCATACTTACTaGAAAGGACTAGGCTGGCAT | + |
Preference number: 4 (lower is better) Translates to: GFADSQIYNLNLGFAYIPFWHTY*KGLGWH Trigger: ATGCCAGCCTAGTCCTTTTCAGTAAGTATGCCAAAA...AGGGATATAGGCAAACCCTAGGTTCAAATTATAAATCTGAGAGTCTGCAAAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR GCA 90 bp | GGTTTTGCAGACTCTCAGATTTATAATTTGAACCTAGGGTTTGCCTATATCCCTAATCTCAAGGCCATTTaGACTGTTTATCCTGGTGTC | + |
Preference number: 4 (lower is better) Translates to: GFADSQIYNLNLGFAYIPNLKAI*TVYPGV Trigger: GACACCAGGATAAACAGTGCAAATGGCCTTGAGATT...AGGGATATAGGCAAACCCTAGGTTCAAATTATAAATCTGAGAGTCTGCAAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR CCA 90 bp | GGTATGGTGAGTATTGTCTCCAGTTGGAGCAAAGACTTTTCACATTTAGTCGTTGATGTTGGAGATCTTTaGTGGAACTTGTACGATCAA | + |
Preference number: 4 (lower is better) Translates to: GMVSIVSSWSKDFSHLVVDVGDL*WNLYDQ Trigger: TTGATCGTACAAGTTCCACCAAAGATCTCCAACATC...AACGACTAAATGTGAAAAGTCTTTGCTCCAACTGGAGACAATACTCACCATACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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3UTR CAA 72 bp | TTCATTCAAATGACTTTGTACCTTACTTTTAATCCATaGGCCTGTAGATCCACAAGGCTGCCAGGGATAATG | + |
Preference number: 4 (lower is better) Translates to: FIQMTLYLTFNP*ACRSTRLPGIM Trigger: CATTATCCCTGGCAGCCTTGTGGATCTACAGGCCAATGGATTAAAAGTAAGGTACAAAGTCATTTGAATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR CAA 72 bp | AGAGGTGGGAGAGACCATGAAGTGTCCTTTGAATTCTaGACTTTCCAGATGAGAAAACTAAAAACTCAGGAA | + |
Preference number: 4 (lower is better) Translates to: RGGRDHEVSFEF*TFQMRKLKTQE Trigger: TTCCTGAGTTTTTAGTTTTCTCATCTGGAAAGTCAAGAATTCAAAGGACACTTCATGGTCTCTCCCACCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR CAA 72 bp | GTTCTTGTAGGTTTTGCAGACTCTCAGATTTATAATTaGAACCTAGGGTTTGCCTATATCCCTGGAATTCCT | + |
Preference number: 4 (lower is better) Translates to: VLVGFADSQIYN*NLGFAYIPGIP Trigger: AGGAATTCCAGGGATATAGGCAAACCCTAGGTTCAAATTATAAATCTGAGAGTCTGCAAAACCTACAAGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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3UTR CAA 72 bp | GATATGATGTCAACCATAATGGGGAATTTACATCACTaGGGCAGACTAAGTCTCTGGAGGAGAAACATTTTT | + |
Preference number: 4 (lower is better) Translates to: DMMSTIMGNLHH*GRLSLWRRNIF Trigger: AAAAATGTTTCTCCTCCAGAGACTTAGTCTGCCCAAGTGATGTAAATTCCCCATTATGGTTGACATCATATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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CDS-3UTR GCA 90 bp | TATGCATATAACACTGTTAATGAGGAGACGTCTAACCAAGAACAGGATTTATACAATCTCAAGGCCATTTaGACTGTTTATCCTGGTGTC | + |
Preference number: 4 (lower is better) Translates to: YAYNTVNEETSNQEQDLYNLKAI*TVYPGV Trigger: GACACCAGGATAAACAGTGCAAATGGCCTTGAGATT...GTATAAATCCTGTTCTTGGTTAGACGTCTCCTCATTAACAGTGTTATATGCATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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3UTR CAA 72 bp | TTTATGGATGCAACCCCTTCACTCCATGCTACCTATTaGTTCCAATCACTTGTTTGTATTCAGTACTTTGAT | + |
Preference number: 4 (lower is better) Translates to: FMDATPSLHATY*FQSLVCIQYFD Trigger: ATCAAAGTACTGAATACAAACAAGTGATTGGAACAAATAGGTAGCATGGAGTGAAGGGGTTGCATCCATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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CDS-3UTR CAA 90 bp | CATGTGACGGCCATGAAAGGGGGAGGAATTCTGCTCCTGGCCTCCCACCCAGCCGCCTTGCACTCATATTaGCCTGACTGTTCCCTGGTG | + |
Preference number: 5 (lower is better) Translates to: HVTAMKGGGILLLASHPAALHSY*PDCSLV Trigger: CACCAGGGAACAGTCAGGCAAATATGAGTGCAAGGC...GGCTGGGTGGGAGGCCAGGAGCAGAATTCCTCCCCCTTTCATGGCCGTCACATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | TGCCCCAGTGGCCTGGCTTGGGGTATTGACTGGCCTCTATGGGCAATGGTGCCATGTTCCTCAGTGACATaGGTCACCGTCAGGGAGGAC | + |
Preference number: 5 (lower is better) Translates to: CPSGLAWGIDWPLWAMVPCSSVT*VTVRED Trigger: GTCCTCCCTGACGGTGACCAATGTCACTGAGGAACA...TGGCACCATTGCCCATAGAGGCCAGTCAATACCCCAAGCCAGGCCACTGGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | GGGCTCCTCTTCCCTTGGTGGGGGAGGGGCCACCATTCAGATACCCACTTGTCTAGGACTAGGCTGGCATaGGTGACACCGAGCTTGTTG | + |
Preference number: 5 (lower is better) Translates to: GLLFPWWGRGHHSDTHLSRTRLA*VTPSLL Trigger: CAACAAGCTCGGTGTCACCAATGCCAGCCTAGTCCT...AGACAAGTGGGTATCTGAATGGTGGCCCCTCCCCCACCAAGGGAAGAGGAGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | AGGGACGCTGCCAGCAGCCACAGTGGTACGGCCAGACTGACGGATCCGTTGATTAGGACTAGGCTGGCATaGGTGACACCGAGCTTGTTG | + |
Preference number: 5 (lower is better) Translates to: RDAASSHSGTARLTDPLIRTRLA*VTPSLL Trigger: CAACAAGCTCGGTGTCACCAATGCCAGCCTAGTCCT...AATCAACGGATCCGTCAGTCTGGCCGTACCACTGTGGCTGCTGGCAGCGTCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133853.3 |
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CDS-3UTR CAA 90 bp | CGCTGCCAGCAGCCACAGTGGTACGGCCAGACTGACGGATCCGTTGATTCCTCTGGTGGTGCCAATTTCTaGAATGGGGTGGGGGACTGT | + |
Preference number: 5 (lower is better) Translates to: RCQQPQWYGQTDGSVDSSGGANF*NGVGDC Trigger: ACAGTCCCCCACCCCATTCAAGAAATTGGCACCACC...AGAGGAATCAACGGATCCGTCAGTCTGGCCGTACCACTGTGGCTGCTGGCAGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133853.3 |
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CDS-3UTR CAA 90 bp | CATGTGACGGCCATGAAAGGGGGAGGAATTCTGCTCCTGGCCTCCCACCCAGCCTGTCTCACGGTGATGTaGTCCGTGCCTCGGTTAAAA | + |
Preference number: 5 (lower is better) Translates to: HVTAMKGGGILLLASHPACLTVM*SVPRLK Trigger: TTTTAACCGAGGCACGGACAACATCACCGTGAGACA...GGCTGGGTGGGAGGCCAGGAGCAGAATTCCTCCCCCTTTCATGGCCGTCACATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | CAGCAACTCGTGACAGCCGCACCTCACAACTACAGTGCAGGACAGTATCTACAGGGTTCAGGGCGCCCATaGGCCATGCAGACCAGGGTT | + |
Preference number: 5 (lower is better) Translates to: QQLVTAAPHNYSAGQYLQGSGRP*AMQTRV Trigger: AACCCTGGTCTGCATGGCCAATGGGCGCCCTGAACC...CTGTAGATACTGTCCTGCACTGTAGTTGTGAGGTGCGGCTGTCACGAGTTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | TGCCCCAGTGGCCTGGCTTGGGGTATTGACTGGCCTCTATGGGCAATGGTGCCAACCTCGTTGGCAGCCTaGCACTCATATTTGCCTGAC | + |
Preference number: 5 (lower is better) Translates to: CPSGLAWGIDWPLWAMVPTSLAA*HSYLPD Trigger: GTCAGGCAAATATGAGTGCAAGGCTGCCAACGAGGT...TGGCACCATTGCCCATAGAGGCCAGTCAATACCCCAAGCCAGGCCACTGGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | GACAAAGCAGGTCTGCTTAGGGTCACCTTGGGCTCCTCTTCCCTTGGTGGGGGACCTGTGGTGGCTTCGTaGCTCTTCGACTCCGTGATA | + |
Preference number: 5 (lower is better) Translates to: DKAGLLRVTLGSSSLGGGPVVAS*LFDSVI Trigger: TATCACGGAGTCGAAGAGCAACGAAGCCACCACAGG...TCCCCCACCAAGGGAAGAGGAGCCCAAGGTGACCCTAAGCAGACCTGCTTTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | GGTACGGCCAGACTGACGGATCCGTTGATTCCTCTCACCGACCCGGGTCCTGATGTTTCACCTTTTGGCTaGAAGTGCACGGTGGTGCCA | + |
Preference number: 5 (lower is better) Translates to: GTARLTDPLIPLTDPGPDVSPFG*KCTVVP Trigger: TGGCACCACCGTGCACTTCAAGCCAAAAGGTGAAAC...ATCAGGACCCGGGTCGGTGAGAGGAATCAACGGATCCGTCAGTCTGGCCGTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133853.3 |
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CDS-3UTR CAA 90 bp | GCCAGACTGACGGATCCGTTGATTCCTCTCACCGACCCGGGTCCTGATGTCATTTGTTCCTCAGTGACATaGGTCACCGTCAGGGAGGAC | + |
Preference number: 5 (lower is better) Translates to: ARLTDPLIPLTDPGPDVICSSVT*VTVRED Trigger: GTCCTCCCTGACGGTGACCAATGTCACTGAGGAACA...AATGACATCAGGACCCGGGTCGGTGAGAGGAATCAACGGATCCGTCAGTCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133853.3 |
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CDS-3UTR CAA 90 bp | TGCCCCAGTGGCCTGGCTTGGGGTATTGACTGGCCTCTATGGGCAATGGTGCCATACGATCAAGTAAACTaGGGAGGTCTTGGGCTCATG | + |
Preference number: 5 (lower is better) Translates to: CPSGLAWGIDWPLWAMVPYDQVN*GGLGLM Trigger: CATGAGCCCAAGACCTCCCAAGTTTACTTGATCGTA...TGGCACCATTGCCCATAGAGGCCAGTCAATACCCCAAGCCAGGCCACTGGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | CAGCAACTCGTGACAGCCGCACCTCACAACTACAGTGCAGGACAGTATCTACAGGCCGAGGAGACCTCGTaGGCAGCCTTGCACTCATAT | + |
Preference number: 5 (lower is better) Translates to: QQLVTAAPHNYSAGQYLQAEETS*AALHSY Trigger: ATATGAGTGCAAGGCTGCCAACGAGGTCTCCTCGGC...CTGTAGATACTGTCCTGCACTGTAGTTGTGAGGTGCGGCTGTCACGAGTTGCTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | CCACCACATGCAGAGAGGCAGCCTTCCTGTAAGATGTCCCCTAGGCCAACTCTGACATTTGAGGGAAGCTaGTCGTCCTGTGGTGGCTTC | + |
Preference number: 5 (lower is better) Translates to: PPHAERQPSCKMSPRPTLTFEGS*SSCGGF Trigger: GAAGCCACCACAGGACGACAAGCTTCCCTCAAATGT...CAGAGTTGGCCTAGGGGACATCTTACAGGAAGGCTGCCTCTCTGCATGTGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS TCA 90 bp | ATGTCCAGCGAAGATGATGCCAGAGCGGTTCAACCAGGCCACTTTTaGGTTCTTGTCTTCTACCACACACCTGAGGATGGCCGTGTCCCC | + |
Preference number: 5 (lower is better) Translates to: MSSEDDARAVQPGHF*VLVFYHTPEDGRVP Trigger: GGGGACACGGCCATCCTCAGGTGTGTGGTAGAAGACAAGAACTCAAAAGTGGCCTGGTTGAACCGCTCTGGCATCATCTTCGCTGGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078873.11 ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | CAGCAACTCGTGACAGCCGCACCTCACAACTACAGTGCAGGACAGTATCTACAGGGGTCCAGAGACCACTaGTCATGTCCAGCGAAGATG | + |
Preference number: 5 (lower is better) Translates to: QQLVTAAPHNYSAGQYLQGSRDH*SCPAKM Trigger: CATCTTCGCTGGACATGACAAGTGGTCTCTGGACCC...CTGTAGATACTGTCCTGCACTGTAGTTGTGAGGTGCGGCTGTCACGAGTTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | GGGTCTCCTACATCCACACCTTTAAAAGGACTGATCCCTTCTCTGCCAACTTTCGGTTCAGGGCGCCCATaGGCCATGCAGACCAGGGTT | + |
Preference number: 5 (lower is better) Translates to: GSPTSTPLKGLIPSLPTFGSGRP*AMQTRV Trigger: AACCCTGGTCTGCATGGCCAATGGGCGCCCTGAACC...GAAAGTTGGCAGAGAAGGGATCAGTCCTTTTAAAGGTGTGGATGTAGGAGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR CAA 90 bp | GACAGCCGCACCTCACAACTACAGTGCAGGACAGTATCTACAGCACAATGGGTCGTGACCTTGACTTGTTaGACATCCGCCGAGGAGACC | + |
Preference number: 5 (lower is better) Translates to: DSRTSQLQCRTVSTAQWVVTLTC*TSAEET Trigger: GGTCTCCTCGGCGGATGTCAAACAAGTCAAGGTCAC...GACCCATTGTGCTGTAGATACTGTCCTGCACTGTAGTTGTGAGGTGCGGCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | ATCCAGGCAGGGGAGCCTGAGAAAGGCTCAACACAGGTTTCCGTTGATAGTCCAGTGACCTTGACTTGTTaGACATCCGCCGAGGAGACC | + |
Preference number: 5 (lower is better) Translates to: IQAGEPEKGSTQVSVDSPVTLTC*TSAEET Trigger: GGTCTCCTCGGCGGATGTCAAACAAGTCAAGGTCAC...TGGACTATCAACGGAAACCTGTGTTGAGCCTTTCTCAGGCTCCCCTGCCTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | AGTGAAGGGACAAAGCAGGTCTGCTTAGGGTCACCTTGGGCTCCTCTTCCCTTGCACAGTGACCTTGACTaGTTTGACATCCGCCGAGGA | + |
Preference number: 5 (lower is better) Translates to: SEGTKQVCLGSPWAPLPLHSDLD*FDIRRG Trigger: TCCTCGGCGGATGTCAAACAAGTCAAGGTCACTGTG...CAAGGGAAGAGGAGCCCAAGGTGACCCTAAGCAGACCTGCTTTGTCCCTTCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | CTGACGGATCCGTTGATTCCTCTCACCGACCCGGGTCCTGATGTCATTAGCCACGTGGGTAAAACACGCTaGAAAAGGACTAGGCTGGCA | + |
Preference number: 5 (lower is better) Translates to: LTDPLIPLTDPGPDVISHVGKTR*KRTRLA Trigger: TGCCAGCCTAGTCCTTTTCAAGCGTGTTTTACCCAC...GTGGCTAATGACATCAGGACCCGGGTCGGTGAGAGGAATCAACGGATCCGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133853.3 |
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CDS-3UTR CAA 90 bp | CGGCTCCTTTTTGCAGTGGGGCTCAGCCTTTATAAAGCTATGAAACTGATGGATGGTTCAGGGCGCCCATaGGCCATGCAGACCAGGGTT | + |
Preference number: 5 (lower is better) Translates to: RLLFAVGLSLYKAMKLMDGSGRP*AMQTRV Trigger: AACCCTGGTCTGCATGGCCAATGGGCGCCCTGAACC...ATCCATCAGTTTCATAGCTTTATAAAGGCTGAGCCCCACTGCAAAAAGGAGCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | CAGCAACTCGTGACAGCCGCACCTCACAACTACAGTGCAGGACAGTATCTACAGCACAGTGACCTTGACTaGTTTGACATCCGCCGAGGA | + |
Preference number: 5 (lower is better) Translates to: QQLVTAAPHNYSAGQYLQHSDLD*FDIRRG Trigger: TCCTCGGCGGATGTCAAACAAGTCAAGGTCACTGTG...CTGTAGATACTGTCCTGCACTGTAGTTGTGAGGTGCGGCTGTCACGAGTTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | GACAGTATCTACAGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATAGACTGACGGATCCGTaGATTCCTCTCACCGACCCG | + |
Preference number: 5 (lower is better) Translates to: DSIYSTMGLCTHGPFPWHRLTDP*IPLTDP Trigger: CGGGTCGGTGAGAGGAATCAACGGATCCGTCAGTCT...ATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCTGTAGATACTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | GGGTCTCCTACATCCACACCTTTAAAAGGACTGATCCCTTCTCTGCCAACTTTCGGGTCCAGAGACCACTaGTCATGTCCAGCGAAGATG | + |
Preference number: 5 (lower is better) Translates to: GSPTSTPLKGLIPSLPTFGSRDH*SCPAKM Trigger: CATCTTCGCTGGACATGACAAGTGGTCTCTGGACCC...GAAAGTTGGCAGAGAAGGGATCAGTCCTTTTAAAGGTGTGGATGTAGGAGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR CAA 90 bp | GCAGGACAGTATCTACAGCACAATGGGTCTATGTACACATGGACCATTCCCCTGACCTCGTTGGCAGCCTaGCACTCATATTTGCCTGAC | + |
Preference number: 5 (lower is better) Translates to: AGQYLQHNGSMYTWTIPLTSLAA*HSYLPD Trigger: GTCAGGCAAATATGAGTGCAAGGCTGCCAACGAGGT...CAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCTGTAGATACTGTCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | AGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATGCTTTAGAGAAAGCCGAGGAGACCTCGTaGGCAGCCTTGCACTCATAT | + |
Preference number: 5 (lower is better) Translates to: STMGLCTHGPFPWHALEKAEETS*AALHSY Trigger: ATATGAGTGCAAGGCTGCCAACGAGGTCTCCTCGGC...TTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | TTCGCGTCTTACATACTATCATCTTCCCATGACCCACTCAGCATCCTCTGTCTCCCTGTGGTGGCTTCGTaGCTCTTCGACTCCGTGATA | + |
Preference number: 5 (lower is better) Translates to: FASYILSSSHDPLSILCLPVVAS*LFDSVI Trigger: TATCACGGAGTCGAAGAGCAACGAAGCCACCACAGG...GAGACAGAGGATGCTGAGTGGGTCATGGGAAGATGATAGTATGTAAGACGCGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR CAA 90 bp | AGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATGCTTTAGAGAAAAGACTGACGGATCCGTaGATTCCTCTCACCGACCCG | + |
Preference number: 5 (lower is better) Translates to: STMGLCTHGPFPWHALEKRLTDP*IPLTDP Trigger: CGGGTCGGTGAGAGGAATCAACGGATCCGTCAGTCT...TTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | CCACCACATGCAGAGAGGCAGCCTTCCTGTAAGATGTCCCCTAGGCCAACTCTGGATCTTTGGTGGAACTaGTACGATCAAGTAAACTTG | + |
Preference number: 5 (lower is better) Translates to: PPHAERQPSCKMSPRPTLDLWWN*YDQVNL Trigger: CAAGTTTACTTGATCGTACAAGTTCCACCAAAGATC...CAGAGTTGGCCTAGGGGACATCTTACAGGAAGGCTGCCTCTCTGCATGTGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | GGGTCTCCTACATCCACACCTTTAAAAGGACTGATCCCTTCTCTGCCAACTTTCGCCTTGCACTCATATTaGCCTGACTGTTCCCTGGTG | + |
Preference number: 5 (lower is better) Translates to: GSPTSTPLKGLIPSLPTFALHSY*PDCSLV Trigger: CACCAGGGAACAGTCAGGCAAATATGAGTGCAAGGC...GAAAGTTGGCAGAGAAGGGATCAGTCCTTTTAAAGGTGTGGATGTAGGAGACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR CAA 90 bp | ATCCCTTCTCTGCCAACTTTCAGGGTCTTCTCTGATCTTCAGAAATGCTCCCTTGTGACCTTGACTTGTTaGACATCCGCCGAGGAGACC | + |
Preference number: 5 (lower is better) Translates to: IPSLPTFRVFSDLQKCSLVTLTC*TSAEET Trigger: GGTCTCCTCGGCGGATGTCAAACAAGTCAAGGTCAC...AAGGGAGCATTTCTGAAGATCAGAGAAGACCCTGAAAGTTGGCAGAGAAGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR CAA 90 bp | AGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATGCTTTAGAGAAACCTGTGGTGGCTTCGTaGCTCTTCGACTCCGTGATA | + |
Preference number: 5 (lower is better) Translates to: STMGLCTHGPFPWHALEKPVVAS*LFDSVI Trigger: TATCACGGAGTCGAAGAGCAACGAAGCCACCACAGG...TTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | CCCTGTCTGCTCACCCCATTGATAGTAGGCACTTTCATGTACAGTGATATTCTGAGGACTAGGCTGGCATaGGTGACACCGAGCTTGTTG | + |
Preference number: 5 (lower is better) Translates to: PCLLTPLIVGTFMYSDILRTRLA*VTPSLL Trigger: CAACAAGCTCGGTGTCACCAATGCCAGCCTAGTCCT...CAGAATATCACTGTACATGAAAGTGCCTACTATCAATGGGGTGAGCAGACAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | CACAACTACAGTGCAGGACAGTATCTACAGCACAATGGGTCTATGTACACATGGGCCTTGCACTCATATTaGCCTGACTGTTCCCTGGTG | + |
Preference number: 5 (lower is better) Translates to: HNYSAGQYLQHNGSMYTWALHSY*PDCSLV Trigger: CACCAGGGAACAGTCAGGCAAATATGAGTGCAAGGC...CCATGTGTACATAGACCCATTGTGCTGTAGATACTGTCCTGCACTGTAGTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | CTACCTGACCAACAAGGTTGTGGGATTACAGATATTACTGAGCCTGTTGCCCATCACAGTGACCTTGACTaGTTTGACATCCGCCGAGGA | + |
Preference number: 5 (lower is better) Translates to: LPDQQGCGITDITEPVAHHSDLD*FDIRRG Trigger: TCCTCGGCGGATGTCAAACAAGTCAAGGTCACTGTG...ATGGGCAACAGGCTCAGTAATATCTGTAATCCCACAACCTTGTTGGTCAGGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR CAA 90 bp | ATCCCTTCTCTGCCAACTTTCAGGGTCTTCTCTGATCTTCAGAAATGCTCCCTTACATTTGAGGGAAGCTaGTCGTCCTGTGGTGGCTTC | + |
Preference number: 5 (lower is better) Translates to: IPSLPTFRVFSDLQKCSLTFEGS*SSCGGF Trigger: GAAGCCACCACAGGACGACAAGCTTCCCTCAAATGT...AAGGGAGCATTTCTGAAGATCAGAGAAGACCCTGAAAGTTGGCAGAGAAGGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR CAA 90 bp | AGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATGCTTTAGAGAAAACATTTGAGGGAAGCTaGTCGTCCTGTGGTGGCTTC | + |
Preference number: 5 (lower is better) Translates to: STMGLCTHGPFPWHALEKTFEGS*SSCGGF Trigger: GAAGCCACCACAGGACGACAAGCTTCCCTCAAATGT...TTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | AGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATGCTTTAGAGAAAGCTGAGGCTTCACATTaGAGGGAAGCTTGTCGTCCT | + |
Preference number: 5 (lower is better) Translates to: STMGLCTHGPFPWHALEKAEASH*REACRP Trigger: AGGACGACAAGCTTCCCTCAAATGTGAAGCCTCAGC...TTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | CCTTTAAAAGGACTGATCCCTTCTCTGCCAACTTTCAGGGTCTTCTCTGATCTTTGTTCCTCAGTGACATaGGTCACCGTCAGGGAGGAC | + |
Preference number: 5 (lower is better) Translates to: PLKGLIPSLPTFRVFSDLCSSVT*VTVRED Trigger: GTCCTCCCTGACGGTGACCAATGTCACTGAGGAACA...AAGATCAGAGAAGACCCTGAAAGTTGGCAGAGAAGGGATCAGTCCTTTTAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR CAA 90 bp | TTCATGTACAGTGATATTCTGAGTGACTCCCAGCTGGGTTCTGAAAATGAGACCTGTTCCTCAGTGACATaGGTCACCGTCAGGGAGGAC | + |
Preference number: 5 (lower is better) Translates to: FMYSDILSDSQLGSENETCSSVT*VTVRED Trigger: GTCCTCCCTGACGGTGACCAATGTCACTGAGGAACA...GGTCTCATTTTCAGAACCCAGCTGGGAGTCACTCAGAATATCACTGTACATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS TCA 90 bp | CCTCGTTGGCAGCCTTGCACTCATATTTGCCTGACTGTTCCCTGGTaGTGCCTAGGATCTCCAGATATTCTTCTTCTCCTTCAAATTCTC | + |
Preference number: 5 (lower is better) Translates to: PRWQPCTHICLTVPW*CLGSPDILLLLQIL Trigger: GAGAATTTGAAGGAGAAGAAGAATATCTGGAGATCCTAGGCATCACCAGGGAACAGTCAGGCAAATATGAGTGCAAGGCTGCCAACGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078873.11 ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | TTCGCGTCTTACATACTATCATCTTCCCATGACCCACTCAGCATCCTCTGTCTCGCCACTTTTGAGTTCTaGTCTTCTACCACACACCTG | + |
Preference number: 5 (lower is better) Translates to: FASYILSSSHDPLSILCLATFEF*SSTTHL Trigger: CAGGTGTGTGGTAGAAGACAAGAACTCAAAAGTGGC...GAGACAGAGGATGCTGAGTGGGTCATGGGAAGATGATAGTATGTAAGACGCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR CAA 90 bp | TATAATAGGATGGGGACCCTGAAGGCCAGGTGCATTATCAAAGCTTATGATATGGGGTCCAGAGACCACTaGTCATGTCCAGCGAAGATG | + |
Preference number: 5 (lower is better) Translates to: YNRMGTLKARCIIKAYDMGSRDH*SCPAKM Trigger: CATCTTCGCTGGACATGACAAGTGGTCTCTGGACCC...CATATCATAAGCTTTGATAATGCACCTGGCCTTCAGGGTCCCCATCCTATTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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CDS-3UTR CAA 90 bp | TTCCTGGTTTATGGATGCAACCCCTTCACTCCATGCTACCTATTTGTTCCAATCGCTGAGGCTTCACATTaGAGGGAAGCTTGTCGTCCT | + |
Preference number: 5 (lower is better) Translates to: FLVYGCNPFTPCYLFVPIAEASH*REACRP Trigger: AGGACGACAAGCTTCCCTCAAATGTGAAGCCTCAGC...GATTGGAACAAATAGGTAGCATGGAGTGAAGGGGTTGCATCCATAAACCAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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CDS TCA 90 bp | GATCAAGTAAACTTGGGAGGTCTTGGGCTCATGCTGTGTCTGAACTaGGCATGTGTAGGATCCTTCATCATAGACATCCACCTTCTGGAT | + |
Preference number: 5 (lower is better) Translates to: DQVNLGGLGLMLCLN*ACVGSFIIDIHLLD Trigger: ATCCAGAAGGTGGATGTCTATGATGAAGGATCCTACACATGCTCAGTTCAGACACAGCATGAGCCCAAGACCTCCCAAGTTTACTTGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078873.11 ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | AGCACAATGGGTCTATGTACACATGGACCATTCCCCTGGCATGCTTTAGAGAAATACGATCAAGTAAACTaGGGAGGTCTTGGGCTCATG | + |
Preference number: 5 (lower is better) Translates to: STMGLCTHGPFPWHALEKYDQVN*GGLGLM Trigger: CATGAGCCCAAGACCTCCCAAGTTTACTTGATCGTA...TTTCTCTAAAGCATGCCAGGGGAATGGTCCATGTGTACATAGACCCATTGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | CTACCTGACCAACAAGGTTGTGGGATTACAGATATTACTGAGCCTGTTGCCCATACATCCGAGGAGATGTaGGAGATCTTTGGTGGAACT | + |
Preference number: 5 (lower is better) Translates to: LPDQQGCGITDITEPVAHTSEEM*EIFGGT Trigger: AGTTCCACCAAAGATCTCCAACATCTCCTCGGATGT...ATGGGCAACAGGCTCAGTAATATCTGTAATCCCACAACCTTGTTGGTCAGGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS CCA 90 bp | AGATCTTTGGTGGAACTTGTACGATCAAGTAAACTTGGGAGGTCTTaGGCTCATGCTGTGTCTGAACTGAGCATGTGTAGGATCCTTCAT | + |
Preference number: 5 (lower is better) Translates to: RSLVELVRSSKLGRS*AHAVSELSMCRILH Trigger: ATGAAGGATCCTACACATGCTCAGTTCAGACACAGCATGAGCCCAAGACCTCCCAAGTTTACTTGATCGTACAAGTTCCACCAAAGATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078873.11 ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | GAAGCCCATAAAGCGTTGGCCTTGAACTCAAGGATAAGAATCCATAAAGGAGAATGTCTCACGGTGATGTaGTCCGTGCCTCGGTTAAAA | + |
Preference number: 5 (lower is better) Translates to: EAHKALALNSRIRIHKGECLTVM*SVPRLK Trigger: TTTTAACCGAGGCACGGACAACATCACCGTGAGACA...TTCTCCTTTATGGATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATGGGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | TTCATGTACAGTGATATTCTGAGTGACTCCCAGCTGGGTTCTGAAAATGAGACCGCCACTTTTGAGTTCTaGTCTTCTACCACACACCTG | + |
Preference number: 5 (lower is better) Translates to: FMYSDILSDSQLGSENETATFEF*SSTTHL Trigger: CAGGTGTGTGGTAGAAGACAAGAACTCAAAAGTGGC...GGTCTCATTTTCAGAACCCAGCTGGGAGTCACTCAGAATATCACTGTACATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | CCTTTAAAAGGACTGATCCCTTCTCTGCCAACTTTCAGGGTCTTCTCTGATCTTTACGATCAAGTAAACTaGGGAGGTCTTGGGCTCATG | + |
Preference number: 5 (lower is better) Translates to: PLKGLIPSLPTFRVFSDLYDQVN*GGLGLM Trigger: CATGAGCCCAAGACCTCCCAAGTTTACTTGATCGTA...AAGATCAGAGAAGACCCTGAAAGTTGGCAGAGAAGGGATCAGTCCTTTTAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR CAA 90 bp | AAACATTCTGTCTACCCTTCCTCTTGTGCTAGGAGAAACATTTTCCTTTTCCAGACCTCGTTGGCAGCCTaGCACTCATATTTGCCTGAC | + |
Preference number: 5 (lower is better) Translates to: KHSVYPSSCARRNIFLFQTSLAA*HSYLPD Trigger: GTCAGGCAAATATGAGTGCAAGGCTGCCAACGAGGT...CTGGAAAAGGAAAATGTTTCTCCTAGCACAAGAGGAAGGGTAGACAGAATGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR CAA 90 bp | GGTATGGTGAGTATTGTCTCCAGTTGGAGCAAAGACTTTTCACATTTAGTCGTTGCTGAGGCTTCACATTaGAGGGAAGCTTGTCGTCCT | + |
Preference number: 5 (lower is better) Translates to: GMVSIVSSWSKDFSHLVVAEASH*REACRP Trigger: AGGACGACAAGCTTCCCTCAAATGTGAAGCCTCAGC...AACGACTAAATGTGAAAAGTCTTTGCTCCAACTGGAGACAATACTCACCATACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR CAA 90 bp | GGTTTTGCAGACTCTCAGATTTATAATTTGAACCTAGGGTTTGCCTATATCCCTAGGACTAGGCTGGCATaGGTGACACCGAGCTTGTTG | + |
Preference number: 5 (lower is better) Translates to: GFADSQIYNLNLGFAYIPRTRLA*VTPSLL Trigger: CAACAAGCTCGGTGTCACCAATGCCAGCCTAGTCCT...AGGGATATAGGCAAACCCTAGGTTCAAATTATAAATCTGAGAGTCTGCAAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR CAA 90 bp | CAAGGGTATGGTGAGTATTGTCTCCAGTTGGAGCAAAGACTTTTCACATTTAGTTGTCTCACGGTGATGTaGTCCGTGCCTCGGTTAAAA | + |
Preference number: 5 (lower is better) Translates to: QGYGEYCLQLEQRLFTFSCLTVM*SVPRLK Trigger: TTTTAACCGAGGCACGGACAACATCACCGTGAGACA...ACTAAATGTGAAAAGTCTTTGCTCCAACTGGAGACAATACTCACCATACCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR CAA 90 bp | GAAGCCCATAAAGCGTTGGCCTTGAACTCAAGGATAAGAATCCATAAAGGAGAAACATCCGAGGAGATGTaGGAGATCTTTGGTGGAACT | + |
Preference number: 5 (lower is better) Translates to: EAHKALALNSRIRIHKGETSEEM*EIFGGT Trigger: AGTTCCACCAAAGATCTCCAACATCTCCTCGGATGT...TTCTCCTTTATGGATTCTTATCCTTGAGTTCAAGGCCAACGCTTTATGGGCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS-3UTR CAA 90 bp | AATAGTTCTTCTATTTGTAAATATTGCTGTTTGTGGAGACTGACCATCTCCACTGCCGAGGAGACCTCGTaGGCAGCCTTGCACTCATAT | + |
Preference number: 5 (lower is better) Translates to: NSSSICKYCCLWRLTISTAEETS*AALHSY Trigger: ATATGAGTGCAAGGCTGCCAACGAGGTCTCCTCGGC...AGTGGAGATGGTCAGTCTCCACAAACAGCAATATTTACAAATAGAAGAACTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS GCA 90 bp | GGATGGCGGATAGATTTCAAGTCAATATGCAGGAACTCTATGACTTaGATGGAATCAGGCTCGGTTTTGGCATACTTACTGAAAAGGACT | + |
Preference number: 5 (lower is better) Translates to: GWRIDFKSICRNSMT*MESGSVLAYLLKRT Trigger: AGTCCTTTTCAGTAAGTATGCCAAAACCGAGCCTGATTCCATGCAAGTCATAGAGTTCCTGCATATTGACTTGAAATCTATCCGCCATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR CAA 90 bp | TCTGTCTCTCAGGGACATTTGAATCTAGAATTATATCTACCTGACCAACAAGGTCAGGAACTCTATGACTaGCATGGAATCAGGCTCGGT | + |
Preference number: 5 (lower is better) Translates to: SVSQGHLNLELYLPDQQGQELYD*HGIRLG Trigger: ACCGAGCCTGATTCCATGCAAGTCATAGAGTTCCTG...ACCTTGTTGGTCAGGTAGATATAATTCTAGATTCAAATGTCCCTGAGAGACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR CAA 90 bp | TCCATTTCCTGGCCCTTACATTACCCCAGTTTCTTAAAGAGGCCACCACAAAAAGATCTTTGGTGGAACTaGTACGATCAAGTAAACTTG | + |
Preference number: 5 (lower is better) Translates to: SISWPLHYPSFLKRPPQKDLWWN*YDQVNL Trigger: CAAGTTTACTTGATCGTACAAGTTCCACCAAAGATC...TTTTTGTGGTGGCCTCTTTAAGAAACTGGGGTAATGTAAGGGCCAGGAAATGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR CAA 90 bp | TATAATAGGATGGGGACCCTGAAGGCCAGGTGCATTATCAAAGCTTATGATATGGATCTTTGGTGGAACTaGTACGATCAAGTAAACTTG | + |
Preference number: 5 (lower is better) Translates to: YNRMGTLKARCIIKAYDMDLWWN*YDQVNL Trigger: CAAGTTTACTTGATCGTACAAGTTCCACCAAAGATC...CATATCATAAGCTTTGATAATGCACCTGGCCTTCAGGGTCCCCATCCTATTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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CDS-3UTR CAA 90 bp | ACGATTCTACCTCTGCTGCAAATGGTGAATCAGCAATGTAAACTTACTGTCATAGAATCAGGCTCGGTTTaGGCATACTTACTGAAAAGG | + |
Preference number: 5 (lower is better) Translates to: TILPLLQMVNQQCKLTVIESGSV*AYLLKR Trigger: CCTTTTCAGTAAGTATGCCAAAACCGAGCCTGATTC...TATGACAGTAAGTTTACATTGCTGATTCACCATTTGCAGCAGAGGTAGAATCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS-3UTR CAA 90 bp | TATGCATATAACACTGTTAATGAGGAGACGTCTAACCAAGAACAGGATTTATACACATCCGAGGAGATGTaGGAGATCTTTGGTGGAACT | + |
Preference number: 5 (lower is better) Translates to: YAYNTVNEETSNQEQDLYTSEEM*EIFGGT Trigger: AGTTCCACCAAAGATCTCCAACATCTCCTCGGATGT...GTATAAATCCTGTTCTTGGTTAGACGTCTCCTCATTAACAGTGTTATATGCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099761.10 |
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CDS CAA 90 bp | GACGCTGCCAGCAGCCACAGTGGTACGGCCAGACTGACGGATCCGTaGATTCCTCTCACCGACCCGGGTCTGAAAAGGACTAGGCTGGCA | + |
Preference number: 6 (lower is better) Translates to: DAASSHSGTARLTDP*IPLTDPGLKRTRLA Trigger: TGCCAGCCTAGTCCTTTTCAGACCCGGGTCGGTGAGAGGAATCAACGGATCCGTCAGTCTGGCCGTACCACTGTGGCTGCTGGCAGCGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS CAA 90 bp | GACGCTGCCAGCAGCCACAGTGGTACGGCCAGACTGACGGATCCGTaGATTCCTCTCACCGACCCGGGTCCTTTTGGCTTGAAGTGCACG | + |
Preference number: 6 (lower is better) Translates to: DAASSHSGTARLTDP*IPLTDPGPFGLKCT Trigger: CGTGCACTTCAAGCCAAAAGGACCCGGGTCGGTGAGAGGAATCAACGGATCCGTCAGTCTGGCCGTACCACTGTGGCTGCTGGCAGCGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145951.8 |
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CDS CAA 72 bp | AGCAGCCACAGTGGTACGGCCAGACTGACGGATCCGTaGATTCCTCTCACCGACCCGGGTCCTTTTGGCTTG | + |
Preference number: 6 (lower is better) Translates to: SSHSGTARLTDP*IPLTDPGPFGL Trigger: CAAGCCAAAAGGACCCGGGTCGGTGAGAGGAATCAACGGATCCGTCAGTCTGGCCGTACCACTGTGGCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145951.8 |
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CDS CAA 90 bp | AGAGCATGGCGCTTCTCCAGCTCAACCCGAGGGTCCAGAGACCACTaGTCATGTCCAGCGAAGATGATGCCAGAGCGGTTCAACCAGGCC | + |
Preference number: 6 (lower is better) Translates to: RAWRFSSSTRGSRDH*SCPAKMMPERFNQA Trigger: GGCCTGGTTGAACCGCTCTGGCATCATCTTCGCTGGACATGACAAGTGGTCTCTGGACCCTCGGGTTGAGCTGGAGAAGCGCCATGCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078873.11 ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS CCA 72 bp | TCCACCTTCTGGATTCGGAGGCTGTATTCCAGAGCATaGCGCTTCTCCAGCTCAACCCGAGGGTCCAGAGAC | + |
Preference number: 6 (lower is better) Translates to: STFWIRRLYSRA*RFSSSTRGSRD Trigger: GTCTCTGGACCCTCGGGTTGAGCTGGAGAAGCGCCATGCTCTGGAATACAGCCTCCGAATCCAGAAGGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078873.11 ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS CAA 72 bp | CGCTTCTCCAGCTCAACCCGAGGGTCCAGAGACCACTaGTCATGTCCAGCGAAGATGATGCCAGAGCGGTTC | + |
Preference number: 6 (lower is better) Translates to: RFSSSTRGSRDH*SCPAKMMPERF Trigger: GAACCGCTCTGGCATCATCTTCGCTGGACATGACAAGTGGTCTCTGGACCCTCGGGTTGAGCTGGAGAAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078873.11 ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS CAA 72 bp | AGCAGCCACAGTGGTACGGCCAGACTGACGGATCCGTaGATTCCTCTCACCGACCCGGGTCTGAAAAGGACT | + |
Preference number: 6 (lower is better) Translates to: SSHSGTARLTDP*IPLTDPGLKRT Trigger: AGTCCTTTTCAGACCCGGGTCGGTGAGAGGAATCAACGGATCCGTCAGTCTGGCCGTACCACTGTGGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS CAA 90 bp | CTTCGACTCCGTGATAGTGGGTGGATAGTTCACAGTGACCTTGACTaGTTTGACATCCGCCGAGGAGACCTCGTTGGCAGCCTTGCACTC | + |
Preference number: 6 (lower is better) Translates to: LRLRDSGWIVHSDLD*FDIRRGDLVGSLAL Trigger: GAGTGCAAGGCTGCCAACGAGGTCTCCTCGGCGGATGTCAAACAAGTCAAGGTCACTGTGAACTATCCACCCACTATCACGGAGTCGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078873.11 ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS CAA 72 bp | ATGCCAGAGCGGTTCAACCAGGCCACTTTTGAGTTCTaGTCTTCTACCACACACCTGAGGATGGCCGTGTCC | + |
Preference number: 6 (lower is better) Translates to: MPERFNQATFEF*SSTTHLRMAVS Trigger: GGACACGGCCATCCTCAGGTGTGTGGTAGAAGACAAGAACTCAAAAGTGGCCTGGTTGAACCGCTCTGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078873.11 ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS CAA 72 bp | CGTGATAGTGGGTGGATAGTTCACAGTGACCTTGACTaGTTTGACATCCGCCGAGGAGACCTCGTTGGCAGC | + |
Preference number: 6 (lower is better) Translates to: RDSGWIVHSDLD*FDIRRGDLVGS Trigger: GCTGCCAACGAGGTCTCCTCGGCGGATGTCAAACAAGTCAAGGTCACTGTGAACTATCCACCCACTATCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078873.11 ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS CAA 72 bp | ACCTTGACTTGTTTGACATCCGCCGAGGAGACCTCGTaGGCAGCCTTGCACTCATATTTGCCTGACTGTTCC | + |
Preference number: 6 (lower is better) Translates to: TLTCLTSAEETS*AALHSYLPDCS Trigger: GGAACAGTCAGGCAAATATGAGTGCAAGGCTGCCAACGAGGTCTCCTCGGCGGATGTCAAACAAGTCAAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078873.11 ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS TCA 72 bp | GAAGATGATGCCAGAGCGGTTCAACCAGGCCACTTTTaGGTTCTTGTCTTCTACCACACACCTGAGGATGGC | + |
Preference number: 6 (lower is better) Translates to: EDDARAVQPGHF*VLVFYHTPEDG Trigger: GCCATCCTCAGGTGTGTGGTAGAAGACAAGAACTCAAAAGTGGCCTGGTTGAACCGCTCTGGCATCATCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078873.11 ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS TCA 72 bp | AACTTGGGAGGTCTTGGGCTCATGCTGTGTCTGAACTaGGCATGTGTAGGATCCTTCATCATAGACATCCAC | + |
Preference number: 6 (lower is better) Translates to: NLGGLGLMLCLN*ACVGSFIIDIH Trigger: GTGGATGTCTATGATGAAGGATCCTACACATGCTCAGTTCAGACACAGCATGAGCCCAAGACCTCCCAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078873.11 ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS CCA 72 bp | GTGGAACTTGTACGATCAAGTAAACTTGGGAGGTCTTaGGCTCATGCTGTGTCTGAACTGAGCATGTGTAGG | + |
Preference number: 6 (lower is better) Translates to: VELVRSSKLGRS*AHAVSELSMCR Trigger: CCTACACATGCTCAGTTCAGACACAGCATGAGCCCAAGACCTCCCAAGTTTACTTGATCGTACAAGTTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078873.11 ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS CAA 90 bp | TCAATATGCAGGAACTCTATGACTTGCATGGAATCAGGCTCGGTTTaGGCATACTTACTGAAAAGGACTAGGCTGGCATTGGTGACACCG | + |
Preference number: 6 (lower is better) Translates to: SICRNSMTCMESGSV*AYLLKRTRLALVTP Trigger: CGGTGTCACCAATGCCAGCCTAGTCCTTTTCAGTAAGTATGCCAAAACCGAGCCTGATTCCATGCAAGTCATAGAGTTCCTGCATATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS TCA 72 bp | CAGCCTTGCACTCATATTTGCCTGACTGTTCCCTGGTaGTGCCTAGGATCTCCAGATATTCTTCTTCTCCTT | + |
Preference number: 6 (lower is better) Translates to: QPCTHICLTVPW*CLGSPDILLLL Trigger: AAGGAGAAGAAGAATATCTGGAGATCCTAGGCATCACCAGGGAACAGTCAGGCAAATATGAGTGCAAGGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078873.11 ENSMUST00000099761.10 ENSMUST00000187695.7 |
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CDS CAA 72 bp | AGGAACTCTATGACTTGCATGGAATCAGGCTCGGTTTaGGCATACTTACTGAAAAGGACTAGGCTGGCATTG | + |
Preference number: 6 (lower is better) Translates to: RNSMTCMESGSV*AYLLKRTRLAL Trigger: CAATGCCAGCCTAGTCCTTTTCAGTAAGTATGCCAAAACCGAGCCTGATTCCATGCAAGTCATAGAGTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS CAA 90 bp | GGGATGGCGGATAGATTTCAAGTCAATATGCAGGAACTCTATGACTaGCATGGAATCAGGCTCGGTTTTGGCATACTTACTGAAAAGGAC | + |
Preference number: 6 (lower is better) Translates to: GMADRFQVNMQELYD*HGIRLGFGILTEKD Trigger: GTCCTTTTCAGTAAGTATGCCAAAACCGAGCCTGATTCCATGCAAGTCATAGAGTTCCTGCATATTGACTTGAAATCTATCCGCCATCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS GCA 72 bp | ACCTTTAAGGGATGGCGGATAGATTTCAAGTCAATATaGAGGAACTCTATGACTTGCATGGAATCAGGCTCG | + |
Preference number: 6 (lower is better) Translates to: TFKGWRIDFKSI*RNSMTCMESGS Trigger: CGAGCCTGATTCCATGCAAGTCATAGAGTTCCTGCATATTGACTTGAAATCTATCCGCCATCCCTTAAAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078873.11 |
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CDS CCA 72 bp | ATTGTGATTGGAGACAAATTTACTTCAGCAGGAGGCTaGTTCCAAAATGCCAAGACTTGCAATGAGAAGAGG | + |
Preference number: 6 (lower is better) Translates to: IVIGDKFTSAGG*FQNAKTCNEKR Trigger: CCTCTTCTCATTGCAAGTCTTGGCATTTTGGAACCAGCCTCCTGCTGAAGTAAATTTGTCTCCAATCACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187695.7 |