Pregenerated sensors for LRWD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029703Ensembl transcript IDs: ENSMUST00000006301.11, ENSMUST00000128255.2, ENSMUST00000150406.2
Found 161 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTGGACTGTCACTCAGACCTGAACCACAGGCTGCTGGGCCTGCCTaGGTTAACCAAGGTAGAAACCCCAGTGGAGCCTGTGTGACTACA | + |
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Preference number: 1 (lower is better) Translates to: CGLSLRPEPQAAGPA*VNQGRNPSGACVTT Trigger: TGTAGTCACACAGGCTCCACTGGGGTTTCTACCTTGGTTAACTCAGGCAGGCCCAGCAGCCTGTGGTTCAGGTCTGAGTGACAGTCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| 3UTR-3UTR TCA 90 bp | GCGACAGCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCCATTCTGTAACTGTCACTCAGACCTaGACCACAGGCTGCTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: ATATLSSLAGHGALPHSVTVTQT*TTGCWA Trigger: GGCCCAGCAGCCTGTGGTTCAGGTCTGAGTGACAGT...TACAGAATGGGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGCTGTCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| 3UTR-3UTR GCA 90 bp | GCGACAGCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCCATTCTGTACAGAAAATGGGGCTGTaGAGTGTGTGGACTGTCACT | + |
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Preference number: 2 (lower is better) Translates to: ATATLSSLAGHGALPHSVQKMGL*SVWTVT Trigger: AGTGACAGTCCACACACTGCACAGCCCCATTTTCTG...TACAGAATGGGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGCTGTCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| 3UTR-3UTR TCA 90 bp | CAGAGCAGAAAATGGGGCTGTGCAGTGTGTGGACTGTCACTCAGACCTGAACCAGCTGCTGGGCCTGCCTaGGTTAACCAAGGTAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: QSRKWGCAVCGLSLRPEPAAGPA*VNQGRN Trigger: GTTTCTACCTTGGTTAACTCAGGCAGGCCCAGCAGC...TGGTTCAGGTCTGAGTGACAGTCCACACACTGCACAGCCCCATTTTCTGCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| 3UTR-3UTR CCA 90 bp | AGAGCAGAAAATGGGGCTGTGCAGTGTGTGGACTGTCACTCAGACCTGAACCACACACTCATTTCCCACTaGCCTCCACTCTACAATAGA | + |
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Preference number: 2 (lower is better) Translates to: RAENGAVQCVDCHSDLNHTLISH*PPLYNR Trigger: TCTATTGTAGAGTGGAGGCCAGTGGGAAATGAGTGT...GTGGTTCAGGTCTGAGTGACAGTCCACACACTGCACAGCCCCATTTTCTGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| 3UTR TCA 72 bp | TCACTCAGACCTGAACCACAGGCTGCTGGGCCTGCCTaGGTTAACCAAGGTAGAAACCCCAGTGGAGCCTGT | + |
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Preference number: 3 (lower is better) Translates to: SLRPEPQAAGPA*VNQGRNPSGAC Trigger: ACAGGCTCCACTGGGGTTTCTACCTTGGTTAACTCAGGCAGGCCCAGCAGCCTGTGGTTCAGGTCTGAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| 3UTR TCA 72 bp | GAGTTAACCAAGGTAGAAACCCCAGTGGAGCCTGTGTaGCTACACTCATTTCCCACTGGCCTCCACTCTACA | + |
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Preference number: 3 (lower is better) Translates to: ELTKVETPVEPV*LHSFPTGLHST Trigger: TGTAGAGTGGAGGCCAGTGGGAAATGAGTGTAGTCACACAGGCTCCACTGGGGTTTCTACCTTGGTTAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR GCA 90 bp | CACATGGCGACAGCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCCATCTGTCTGCCCCGGCCTaGCCATGTCTGGCTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: HMATATLSSLAGHGALPHLSAPA*PCLAPA Trigger: AGCTGGAGCCAGACATGGGCAGGCCGGGGCAGACAG...ATGGGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGCTGTCGCCATGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR TCA 90 bp | CACATGGCGACAGCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCCATTCTGCCAGTGAGCTGTaGCCCTGTCCATCAGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: HMATATLSSLAGHGALPHSASEL*PCPSAP Trigger: GGGAGCTGATGGACAGGGTCACAGCTCACTGGCAGA...ATGGGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGCTGTCGCCATGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR TCA 90 bp | CACATGGCGACAGCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCCATTCTTATGGGCCCGGATaGCGCTGCAGCAGAAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: HMATATLSSLAGHGALPHSYGPG*RCSRSL Trigger: CAGGCTTCTGCTGCAGCGTCATCCGGGCCCATAAGA...ATGGGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGCTGTCGCCATGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR GCA 90 bp | GCGACAGCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCCATTCTGTAGCGCTTCTTGTGGCCTaGCTGGGTGACCACCGTGAG | + |
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Preference number: 4 (lower is better) Translates to: ATATLSSLAGHGALPHSVALLVA*LGDHRE Trigger: CTCACGGTGGTCACCCAGGCAGGCCACAAGAAGCGC...TACAGAATGGGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGCTGTCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR CCA 90 bp | TACCACATGGCGACAGCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCCCACCTGTGAGCAGGTaGAGGCCGTGTCCTTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: YHMATATLSSLAGHGALPPPVSR*RPCPCH Trigger: ATGGCAAGGACACGGCCTCCACCTGCTCACAGGTGG...GGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGCTGTCGCCATGTGGTA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR CCA 90 bp | TACCACATGGCGACAGCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCCCTCTCCACCACATGTaGCCACGGTCTGGGATGTGG | + |
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Preference number: 4 (lower is better) Translates to: YHMATATLSSLAGHGALPPLHHM*PRSGMW Trigger: CCACATCCCAGACCGTGGCCACATGTGGTGGAGAGG...GGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGCTGTCGCCATGTGGTA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR CCA 90 bp | TACCACATGGCGACAGCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCAGTAGGCCAGGTTGGTaGGTGACCACTGCAGCCGGA | + |
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Preference number: 4 (lower is better) Translates to: YHMATATLSSLAGHGALPSRPGW*VTTAAG Trigger: TCCGGCTGCAGTGGTCACCCACCAACCTGGCCTACT...GGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGCTGTCGCCATGTGGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR TCA 90 bp | ATGGCGACAGCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCCATTCTGAGGCAGTGAAGAGGTaGGTCTCATGGCTGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: MATATLSSLAGHGALPHSEAVKR*VSWLGL Trigger: CAGCCCCAGCCATGAGACTCACCTCTTCACTGCCTC...AGAATGGGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGCTGTCGCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR GCA 90 bp | ATGGCGACAGCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCCATTCTGCAACACAGACTGTCTaGCCCGGCCTGCCCATGTCT | + |
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Preference number: 4 (lower is better) Translates to: MATATLSSLAGHGALPHSATQTV*PGLPMS Trigger: AGACATGGGCAGGCCGGGGCAGACAGTCTGTGTTGC...AGAATGGGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGCTGTCGCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR CCA 90 bp | ATGGCGACAGCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCCATTCTCTTTGCTTCTGGGGCTaGTCTAGCCGCACGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: MATATLSSLAGHGALPHSLCFWG*SSRTSQ Trigger: CTGGGACGTGCGGCTAGACCAGCCCCAGAAGCAAAG...AGAATGGGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGCTGTCGCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR TCA 90 bp | CACATGGCGACAGCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCCATGGCTCACAGTGGCTATaGACTTCTGCCAGTGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: HMATATLSSLAGHGALPHGSQWL*TSASEL Trigger: CAGCTCACTGGCAGAAGTTCATAGCCACTGTGAGCC...ATGGGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGCTGTCGCCATGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR GCA 90 bp | GCGACAGCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCCATTCTGTATGGTACAGCGAAGGATaGGCAGATGGGACAGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: ATATLSSLAGHGALPHSVWYSEG*ADGTGP Trigger: TGGGCCTGTCCCATCTGCGCATCCTTCGCTGTACCA...TACAGAATGGGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGCTGTCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR GCA 90 bp | AGCAGAGCAGAAAATGGGGCTGTGCAGTGTGTGGACTGTCACTCAGACCTGAACGCAGCAGCCGGACCATaGCGCGGAGGCCTGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: SRAENGAVQCVDCHSDLNAAAGP*RGGLQL Trigger: CAGCTGCAGGCCTCCGCGGCATGGTCCGGCTGCTGC...GTTCAGGTCTGAGTGACAGTCCACACACTGCACAGCCCCATTTTCTGCTCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR CCA 90 bp | GGCTGTGCAGTGTGTGGACTGTCACTCAGACCTGAACCACAGGCTGCTGGGCCTTTCTTGTGGCCTGCCTaGGTGACCACCGTGAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: GCAVCGLSLRPEPQAAGPFLWPA*VTTVRA Trigger: AGCCCTCACGGTGGTCACCCAGGCAGGCCACAAGAA...AGGCCCAGCAGCCTGTGGTTCAGGTCTGAGTGACAGTCCACACACTGCACAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR CCA 90 bp | GGCTGTGCAGTGTGTGGACTGTCACTCAGACCTGAACCACAGGCTGCTGGGCCTTTCCAGCGCTTCTTGTaGCCTGCCTGGGTGACCACC | + |
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Preference number: 4 (lower is better) Translates to: GCAVCGLSLRPEPQAAGPFQRFL*PAWVTT Trigger: GGTGGTCACCCAGGCAGGCCACAAGAAGCGCTGGAA...AGGCCCAGCAGCCTGTGGTTCAGGTCTGAGTGACAGTCCACACACTGCACAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR TCA 90 bp | TCAGGGCCCTTCAGTTTACCACATGGCGACAGCCACTCTCAGCTCTCTAGCTGGGGGATCCAAGTGCTCTaGGAGCAGCTGCAGCCCCGA | + |
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Preference number: 4 (lower is better) Translates to: SGPFSLPHGDSHSQLSSWGIQVL*EQLQPR Trigger: TCGGGGCTGCAGCTGCTCTCAGAGCACTTGGATCCC...CCAGCTAGAGAGCTGAGAGTGGCTGTCGCCATGTGGTAAACTGAAGGGCCCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR TCA 90 bp | TACCACATGGCGACAGCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCGGTTGCCTTCCAGATTaGGCTCCTCAAGTTCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: YHMATATLSSLAGHGALPGCLPD*APQVLG Trigger: TCCCAGAACTTGAGGAGCTCAATCTGGAAGGCAACC...GGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGCTGTCGCCATGTGGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR TCA 90 bp | GTGGACTGTCACTCAGACCTGAACCACAGGCTGCTGGGCCTGCCTGAGTTAACCTGCTGGGAGGAAGGGTaGCTGGGTCTTTACCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: VDCHSDLNHRLLGLPELTCWEEG*LGLYLA Trigger: GGCCAGGTAAAGACCCAGTCACCCTTCCTCCCAGCA...GGTTAACTCAGGCAGGCCCAGCAGCCTGTGGTTCAGGTCTGAGTGACAGTCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR TCA 90 bp | CAGAGCAGAAAATGGGGCTGTGCAGTGTGTGGACTGTCACTCAGACCTGAACCAGGACTGCCCTCAGCCTaGGCAGGTGGGAGAGCACGC | + |
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Preference number: 4 (lower is better) Translates to: QSRKWGCAVCGLSLRPEPGLPSA*AGGRAR Trigger: GCGTGCTCTCCCACCTGCTCAGGCTGAGGGCAGTCC...TGGTTCAGGTCTGAGTGACAGTCCACACACTGCACAGCCCCATTTTCTGCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR TCA 90 bp | AGAGCAGAAAATGGGGCTGTGCAGTGTGTGGACTGTCACTCAGACCTGAACCACGGCCAGGTTGGTGGGTaGCCACTGCAGCCGGACCAG | + |
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Preference number: 4 (lower is better) Translates to: RAENGAVQCVDCHSDLNHGQVGG*PLQPDQ Trigger: CTGGTCCGGCTGCAGTGGTCACCCACCAACCTGGCC...GTGGTTCAGGTCTGAGTGACAGTCCACACACTGCACAGCCCCATTTTCTGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR GCA 90 bp | GCGACAGCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCCATTCTGTAAGTTCTGGGAACTGGTaGAAGGCAGTGACATCCCCG | + |
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Preference number: 4 (lower is better) Translates to: ATATLSSLAGHGALPHSVSSGNW*KAVTSP Trigger: CGGGGATGTCACTGCCTTGCACCAGTTCCCAGAACT...TACAGAATGGGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGCTGTCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR GCA 90 bp | AACCCCAGTGGAGCCTGTGTGACTACACTCATTTCCCACTGGCCTCCACTCTACCCTGCAGCCTGGGGATaGTCCACGGGGACCTTAGCG | + |
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Preference number: 4 (lower is better) Translates to: NPSGACVTTLISHWPPLYPAAWG*STGTLA Trigger: CGCTAAGGTCCCCGTGGAGCATCCCCAGGCTGCAGG...GTAGAGTGGAGGCCAGTGGGAAATGAGTGTAGTCACACAGGCTCCACTGGGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR CCA 90 bp | GGCTGTGCAGTGTGTGGACTGTCACTCAGACCTGAACCACAGGCTGCTGGGCCTCGAAGGATGCGCAGATaGGACAGGCCCAGGTTAGCA | + |
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Preference number: 4 (lower is better) Translates to: GCAVCGLSLRPEPQAAGPRRMRR*DRPRLA Trigger: TGCTAACCTGGGCCTGTCCCATCTGCGCATCCTTCG...AGGCCCAGCAGCCTGTGGTTCAGGTCTGAGTGACAGTCCACACACTGCACAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR CCA 90 bp | AGCAGAGCAGAAAATGGGGCTGTGCAGTGTGTGGACTGTCACTCAGACCTGAACGAGGCACCTGCAGCCTaGGGATGCTCCACGGGGACC | + |
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Preference number: 4 (lower is better) Translates to: SRAENGAVQCVDCHSDLNEAPAA*GCSTGT Trigger: GGTCCCCGTGGAGCATCCCCAGGCTGCAGGTGCCTC...GTTCAGGTCTGAGTGACAGTCCACACACTGCACAGCCCCATTTTCTGCTCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR CCA 90 bp | GCGACAGCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCCATTCTGTAGGGAGGAAGGGTGACTaGGTCTTTACCTGGCCGTTT | + |
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Preference number: 4 (lower is better) Translates to: ATATLSSLAGHGALPHSVGRKGD*VFTWPF Trigger: AAACGGCCAGGTAAAGACCCAGTCACCCTTCCTCCC...TACAGAATGGGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGCTGTCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR CCA 90 bp | TCAGGGCCCTTCAGTTTACCACATGGCGACAGCCACTCTCAGCTCTCTAGCTGGCATGTGGCCACGGTCTaGGATGTGGCCCTCGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: SGPFSLPHGDSHSQLSSWHVATV*DVALEC Trigger: GCACTCGAGGGCCACATCCCAGACCGTGGCCACATG...CCAGCTAGAGAGCTGAGAGTGGCTGTCGCCATGTGGTAAACTGAAGGGCCCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR CCA 90 bp | CACATGGCGACAGCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCCATCCTGTCCACTCCCTTTaGAGGCCACCACATCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: HMATATLSSLAGHGALPHPVHSL*RPPHLH Trigger: ATGAAGATGTGGTGGCCTCCAAAGGGAGTGGACAGG...ATGGGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGCTGTCGCCATGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR TCA 90 bp | TACCACATGGCGACAGCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCAGTCCTCAGAGAAGATaGAGTTCACCTCACACACCC | + |
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Preference number: 4 (lower is better) Translates to: YHMATATLSSLAGHGALPSPQRR*SSPHTP Trigger: GGGTGTGTGAGGTGAACTTCATCTTCTCTGAGGACT...GGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGCTGTCGCCATGTGGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR CCA 90 bp | AGAGCAGAAAATGGGGCTGTGCAGTGTGTGGACTGTCACTCAGACCTGAACCACCCACGGTCTGGGATGTaGCCCTCGAGTGCCCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: RAENGAVQCVDCHSDLNHPRSGM*PSSAPP Trigger: AGGAGGGGCACTCGAGGGCCACATCCCAGACCGTGG...GTGGTTCAGGTCTGAGTGACAGTCCACACACTGCACAGCCCCATTTTCTGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR TCA 90 bp | GTGGACTGTCACTCAGACCTGAACCACAGGCTGCTGGGCCTGCCTGAGTTAACCGGGACAGGTGCTGAGTaGAAAGTAGGCCAGGTTGGT | + |
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Preference number: 4 (lower is better) Translates to: VDCHSDLNHRLLGLPELTGTGAE*KVGQVG Trigger: ACCAACCTGGCCTACTTTTCACTCAGCACCTGTCCC...GGTTAACTCAGGCAGGCCCAGCAGCCTGTGGTTCAGGTCTGAGTGACAGTCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR CCA 90 bp | TACCACATGGCGACAGCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCTCACCTTACGAAGCTTaGGCAGGAGAAAGGAGACTT | + |
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Preference number: 4 (lower is better) Translates to: YHMATATLSSLAGHGALPSPYEA*AGERRL Trigger: AAGTCTCCTTTCTCCTGCCCAAGCTTCGTAAGGTGA...GGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGCTGTCGCCATGTGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR CCA 90 bp | AGCAGAGCAGAAAATGGGGCTGTGCAGTGTGTGGACTGTCACTCAGACCTGAACGCACAGGCCCACAGCTaGGTCTCCAGGTCCTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: SRAENGAVQCVDCHSDLNAQAHS*VSRSFG Trigger: CCCAAAGGACCTGGAGACCCAGCTGTGGGCCTGTGC...GTTCAGGTCTGAGTGACAGTCCACACACTGCACAGCCCCATTTTCTGCTCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR TCA 90 bp | TCAGGGCCCTTCAGTTTACCACATGGCGACAGCCACTCTCAGCTCTCTAGCTGGTGTCGTAGGAGGCAGTaGAGAGGTGAGTCTCATGGC | + |
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Preference number: 4 (lower is better) Translates to: SGPFSLPHGDSHSQLSSWCRRRQ*RGESHG Trigger: GCCATGAGACTCACCTCTTCACTGCCTCCTACGACA...CCAGCTAGAGAGCTGAGAGTGGCTGTCGCCATGTGGTAAACTGAAGGGCCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR TCA 90 bp | GCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCCATTCTGTACATAGACAATGTCCCAGAGGATaGTCCGTTTGTCGTAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: ATLSSLAGHGALPHSVHRQCPRG*SVCRRR Trigger: CCTCCTACGACAAACGGATCATCCTCTGGGACATTG...TCTATGTACAGAATGGGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR GCA 90 bp | GCGACAGCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCCATTCTGTAACACACATCCCTGACTaGAGACCTCATGAAATCAGC | + |
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Preference number: 4 (lower is better) Translates to: ATATLSSLAGHGALPHSVTHIPD*RPHEIS Trigger: GCTGATTTCATGAGGTCTGCAGTCAGGGATGTGTGT...TACAGAATGGGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGCTGTCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR GCA 90 bp | AGAGCAGAAAATGGGGCTGTGCAGTGTGTGGACTGTCACTCAGACCTGAACCACGAACTTGGAGGCACCTaGAGCCTGGGGATGCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: RAENGAVQCVDCHSDLNHELGGT*SLGMLH Trigger: GTGGAGCATCCCCAGGCTGCAGGTGCCTCCAAGTTC...GTGGTTCAGGTCTGAGTGACAGTCCACACACTGCACAGCCCCATTTTCTGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR GCA 90 bp | AGAAACCCCAGTGGAGCCTGTGTGACTACACTCATTTCCCACTGGCCTCCACTCAGGTGTAGGGCAGCCTaGCCTCCATCAGCACCCATA | + |
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Preference number: 4 (lower is better) Translates to: RNPSGACVTTLISHWPPLRCRAA*PPSAPI Trigger: TATGGGTGCTGATGGAGGGCAGGCTGCCCTACACCT...GAGTGGAGGCCAGTGGGAAATGAGTGTAGTCACACAGGCTCCACTGGGGTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR CCA 90 bp | AGAAACCCCAGTGGAGCCTGTGTGACTACACTCATTTCCCACTGGCCTCCACTCGCAATGGCCTTCTTATaGGCCCGGATGACGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: RNPSGACVTTLISHWPPLAMAFL*ARMTLQ Trigger: CTGCAGCGTCATCCGGGCCCATAAGAAGGCCATTGC...GAGTGGAGGCCAGTGGGAAATGAGTGTAGTCACACAGGCTCCACTGGGGTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR CCA 90 bp | AGAAACCCCAGTGGAGCCTGTGTGACTACACTCATTTCCCACTGGCCTCCACTCAGTCATCTGGGCAGGTaGCAACAGGACAGAGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: RNPSGACVTTLISHWPPLSHLGR*QQDRGA Trigger: TGCGCCTCTGTCCTGTTGCCACCTGCCCAGATGACT...GAGTGGAGGCCAGTGGGAAATGAGTGTAGTCACACAGGCTCCACTGGGGTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS-3UTR CCA 90 bp | CACATGGCGACAGCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCCATTGTTTATCATGGTCTTaGTCACTGGTTGGCCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: HMATATLSSLAGHGALPHCLSWS*SLVGPM Trigger: CATTGGGCCAACCAGTGACCAAGACCATGATAAACA...ATGGGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGCTGTCGCCATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR CCA 90 bp | ATGGCGACAGCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCCATTCTCGACTGTGTTTATCATaGTCTTGGTCACTGGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: MATATLSSLAGHGALPHSRLCLS*SWSLVG Trigger: GCCAACCAGTGACCAAGACCATGATAAACACAGTCG...AGAATGGGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGCTGTCGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR TCA 90 bp | CAGAGCAGAAAATGGGGCTGTGCAGTGTGTGGACTGTCACTCAGACCTGAACCAACTGGTGCAAGGCAGTaGCATCCCCGAGCTGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QSRKWGCAVCGLSLRPEPTGARQ*HPRAGC Trigger: ACAACCAGCTCGGGGATGTCACTGCCTTGCACCAGT...TGGTTCAGGTCTGAGTGACAGTCCACACACTGCACAGCCCCATTTTCTGCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR GCA 90 bp | TCAGGGCCCTTCAGTTTACCACATGGCGACAGCCACTCTCAGCTCTCTAGCTGGGAGGTAGGTGAAGGCTaGATTGGCCACGACTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SGPFSLPHGDSHSQLSSWEVGEG*IGHDCV Trigger: AACACAGTCGTGGCCAATGCAGCCTTCACCTACCTC...CCAGCTAGAGAGCTGAGAGTGGCTGTCGCCATGTGGTAAACTGAAGGGCCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR CCA 90 bp | TCAGACCTGAACCACAGGCTGCTGGGCCTGCCTGAGTTAACCAAGGTAGAAACCCAGCAGGAAGTCATCTaGGCAGGTGGCAACAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SDLNHRLLGLPELTKVETQQEVI*AGGNRT Trigger: TGTCCTGTTGCCACCTGCCCAGATGACTTCCTGCTG...GGTTTCTACCTTGGTTAACTCAGGCAGGCCCAGCAGCCTGTGGTTCAGGTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR CCA 90 bp | AGAAACCCCAGTGGAGCCTGTGTGACTACACTCATTTCCCACTGGCCTCCACTCAGCTCCACAGGTAGATaGTGCCCTGTCCACTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RNPSGACVTTLISHWPPLSSTGR*CPVHSL Trigger: AAGGGAGTGGACAGGGCACCATCTACCTGTGGAGCT...GAGTGGAGGCCAGTGGGAAATGAGTGTAGTCACACAGGCTCCACTGGGGTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR TCA 90 bp | AGAGCAGAAAATGGGGCTGTGCAGTGTGTGGACTGTCACTCAGACCTGAACCACCCCAATGCTGTTGGCTaGGGCCACTTCAGGATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RAENGAVQCVDCHSDLNHPNAVG*GHFRIC Trigger: ACAGATCCTGAAGTGGCCTCAGCCAACAGCATTGGG...GTGGTTCAGGTCTGAGTGACAGTCCACACACTGCACAGCCCCATTTTCTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR GCA 90 bp | GGCTGTGCAGTGTGTGGACTGTCACTCAGACCTGAACCACAGGCTGCTGGGCCTTTGGGCTGTTGTTTCTaGTATGACACTGCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GCAVCGLSLRPEPQAAGPLGCCF*YDTAGS Trigger: ACTTCCTGCAGTGTCATAGCAGAAACAACAGCCCAA...AGGCCCAGCAGCCTGTGGTTCAGGTCTGAGTGACAGTCCACACACTGCACAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR GCA 90 bp | AGAGCAGAAAATGGGGCTGTGCAGTGTGTGGACTGTCACTCAGACCTGAACCACTCCACAGGTAGATGGTaGCCTGTCCACTCCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RAENGAVQCVDCHSDLNHSTGRW*PVHSLW Trigger: CCAAAGGGAGTGGACAGGGCACCATCTACCTGTGGA...GTGGTTCAGGTCTGAGTGACAGTCCACACACTGCACAGCCCCATTTTCTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR CCA 90 bp | TCAGACCTGAACCACAGGCTGCTGGGCCTGCCTGAGTTAACCAAGGTAGAAACCCATGGTCTTGGTCACTaGTTGGCCCAATGCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SDLNHRLLGLPELTKVETHGLGH*LAQCCW Trigger: CCAACAGCATTGGGCCAACCAGTGACCAAGACCATG...GGTTTCTACCTTGGTTAACTCAGGCAGGCCCAGCAGCCTGTGGTTCAGGTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR TCA 90 bp | CAGAGCAGAAAATGGGGCTGTGCAGTGTGTGGACTGTCACTCAGACCTGAACCAATGAACTTCTGCCAGTaGGCTGTGACCCTGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: QSRKWGCAVCGLSLRPEPMNFCQ*AVTLSI Trigger: GATGGACAGGGTCACAGCTCACTGGCAGAAGTTCAT...TGGTTCAGGTCTGAGTGACAGTCCACACACTGCACAGCCCCATTTTCTGCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR GCA 90 bp | AGAGCAGAAAATGGGGCTGTGCAGTGTGTGGACTGTCACTCAGACCTGAACCACAGATTGGGATCCAAGTaGTCTGAGAGCAGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RAENGAVQCVDCHSDLNHRLGSK*SESSCS Trigger: GCTGCAGCTGCTCTCAGAGCACTTGGATCCCAATCT...GTGGTTCAGGTCTGAGTGACAGTCCACACACTGCACAGCCCCATTTTCTGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGCAGAAAATGGGGCTGTGCAGTGTGTGGACTGTCACTCAGACCTGAACCAGAGTTGTTGCCTGTaGAGGCTCTTTCAGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRAENGAVQCVDCHSDLNQSCCL*RLFQEV Trigger: CACCTCCTGAAAGAGCCTCCACAGGCAACAACTCTG...GTTCAGGTCTGAGTGACAGTCCACACACTGCACAGCCCCATTTTCTGCTCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR CCA 90 bp | AGAAACCCCAGTGGAGCCTGTGTGACTACACTCATTTCCCACTGGCCTCCACTCAGCATCTCCTCCAGATaGACACGATGTTGGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RNPSGACVTTLISHWPPLSISSR*TRCWSL Trigger: CAGACTCCAACATCGTGTCCATCTGGAGGAGATGCT...GAGTGGAGGCCAGTGGGAAATGAGTGTAGTCACACAGGCTCCACTGGGGTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR TCA 90 bp | CAGAGCAGAAAATGGGGCTGTGCAGTGTGTGGACTGTCACTCAGACCTGAACCACTGTTGTTTCTGCTATaGCACTGCAGGAAGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSRKWGCAVCGLSLRPEPLLFLL*HCRKCR Trigger: CCTGCACTTCCTGCAGTGTCATAGCAGAAACAACAG...TGGTTCAGGTCTGAGTGACAGTCCACACACTGCACAGCCCCATTTTCTGCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR CCA 90 bp | AGAGCAGAAAATGGGGCTGTGCAGTGTGTGGACTGTCACTCAGACCTGAACCACTCAAGTTCTGGGAACTaGTGCAAGGCAGTGACATCC | + |
|
Preference number: 4 (lower is better) Translates to: RAENGAVQCVDCHSDLNHSSSGN*CKAVTS Trigger: GGATGTCACTGCCTTGCACCAGTTCCCAGAACTTGA...GTGGTTCAGGTCTGAGTGACAGTCCACACACTGCACAGCCCCATTTTCTGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR TCA 90 bp | AGAGCAGAAAATGGGGCTGTGCAGTGTGTGGACTGTCACTCAGACCTGAACCACGACAGATTCAAACTCTaGATCTTCCCCAGCTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: RAENGAVQCVDCHSDLNHDRFKL*IFPSLS Trigger: GGATAAGCTGGGGAAGATTCAGAGTTTGAATCTGTC...GTGGTTCAGGTCTGAGTGACAGTCCACACACTGCACAGCCCCATTTTCTGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR GCA 90 bp | TCAGACCTGAACCACAGGCTGCTGGGCCTGCCTGAGTTAACCAAGGTAGAAACCATCTTCATTCACAAATaGCAGCCCATCGACTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SDLNHRLLGLPELTKVETIFIHK*QPIDSL Trigger: CAAAGAGTCGATGGGCTGGCATTTGTGAATGAAGAT...GGTTTCTACCTTGGTTAACTCAGGCAGGCCCAGCAGCCTGTGGTTCAGGTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS TCA 90 bp | GGGATGCTCCACGGGGACCTTAGCGTCTTGCACCTGGGCCCCACCTaGGGCCACCAGTTCCTCGGCGATCATCCGCACCCGCCACTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: GMLHGDLSVLHLGPT*GHQFLGDHPHPPLR Trigger: ACGCAGTGGCGGGTGCGGATGATCGCCGAGGAACTGGTGGCCTCAGGTGGGGCCCAGGTGCAAGACGCTAAGGTCCCCGTGGAGCATCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS GCA 90 bp | GGCAATGGCCTTCTTATGGGCCCGGATGACGCTGCAGCAGAAGCCTaGGCGAACATGCAGCAGCCGGACCATGCCGCGGAGGCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GNGLLMGPDDAAAEA*ANMQQPDHAAEACS Trigger: GCTGCAGGCCTCCGCGGCATGGTCCGGCTGCTGCATGTTCGCGCAGGCTTCTGCTGCAGCGTCATCCGGGCCCATAAGAAGGCCATTGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS CCA 90 bp | TCACGCAAACAGCCTCTCCACCACATGTGGCCACGGTCTGGGATGTaGCCCTCGAGTGCCCCTCCTCCCGGGCCGGCTCAAAGGCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRKQPLHHMWPRSGM*PSSAPPPGPAQRHR Trigger: CCTGTGCCTTTGAGCCGGCCCGGGAGGAGGGGCACTCGAGGGCCACATCCCAGACCGTGGCCACATGTGGTGGAGAGGCTGTTTGCGTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS CCA 90 bp | GGCCTGTCTGGCAGTCTATCACGCAAACAGCCTCTCCACCACATGTaGCCACGGTCTGGGATGTGGCCCTCGAGTGCCCCTCCTCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GLSGSLSRKQPLHHM*PRSGMWPSSAPPPG Trigger: CCCGGGAGGAGGGGCACTCGAGGGCCACATCCCAGACCGTGGCCACATGTGGTGGAGAGGCTGTTTGCGTGATAGACTGCCAGACAGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS CCA 90 bp | ATGCCGCGGAGGCCTGCAGCTGCTAGCATGTTCCAGCGCTTCTTGTaGCCTGCCTGGGTGACCACCGTGAGGGCTGTCCAGGCCACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: MPRRPAAASMFQRFL*PAWVTTVRAVQATE Trigger: CTCAGTGGCCTGGACAGCCCTCACGGTGGTCACCCAGGCAGGCCACAAGAAGCGCTGGAACATGCTAGCAGCTGCAGGCCTCCGCGGCAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS GCA 90 bp | TTCTTATGGGCCCGGATGACGCTGCAGCAGAAGCCTGCGCGAACATaGAGCAGCCGGACCATGCCGCGGAGGCCTGCAGCTGCTAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: FLWARMTLQQKPART*SSRTMPRRPAAASM Trigger: CATGCTAGCAGCTGCAGGCCTCCGCGGCATGGTCCGGCTGCTGCATGTTCGCGCAGGCTTCTGCTGCAGCGTCATCCGGGCCCATAAGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS GCA 90 bp | CCGGACCAGGATGACTACGGGCAACACAGACTGTCTGCCCCGGCCTaGCCATGTCTGGCTCCAGCTCCACAGGTAGATGGTGCCCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PDQDDYGQHRLSAPA*PCLAPAPQVDGALS Trigger: GGACAGGGCACCATCTACCTGTGGAGCTGGAGCCAGACATGGGCAGGCCGGGGCAGACAGTCTGTGTTGCCCGTAGTCATCCTGGTCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR CAA 90 bp | GGCTGTGCAGTGTGTGGACTGTCACTCAGACCTGAACCACAGGCTGCTGGGCCTCTTGGGTCGCCCACGTaGCAGGAGCAGTTGCGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: GCAVCGLSLRPEPQAAGPLGSPT*QEQLRR Trigger: ACGCCGCAACTGCTCCTGCAACGTGGGCGACCCAAG...AGGCCCAGCAGCCTGTGGTTCAGGTCTGAGTGACAGTCCACACACTGCACAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR CAA 90 bp | ATGGCGACAGCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCCATTCTTCTCTGGCCCTGAACTaGGAGGCACCTGCAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: MATATLSSLAGHGALPHSSLALN*EAPAAW Trigger: CCAGGCTGCAGGTGCCTCCAAGTTCAGGGCCAGAGA...AGAATGGGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGCTGTCGCCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS TCA 90 bp | CCTGAGCAGGTGGGAGAGCACGCACTCGCTTGCTGGGAGGAAGGGTaGCTGGGTCTTTACCTGGCCGTTTTGAAGCCACCTCTCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PEQVGEHALACWEEG*LGLYLAVLKPPLWP Trigger: GGGCCAGAGAGGTGGCTTCAAAACGGCCAGGTAAAGACCCAGTCACCCTTCCTCCCAGCAAGCGAGTGCGTGCTCTCCCACCTGCTCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS CCA 90 bp | AGGCCTGCAGCTGCTAGCATGTTCCAGCGCTTCTTGTGGCCTGCCTaGGTGACCACCGTGAGGGCTGTCCAGGCCACTGAGAAGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: RPAAASMFQRFLWPA*VTTVRAVQATEKNS Trigger: GGAGTTCTTCTCAGTGGCCTGGACAGCCCTCACGGTGGTCACCCAGGCAGGCCACAAGAAGCGCTGGAACATGCTAGCAGCTGCAGGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS CCA 90 bp | TCTGGCTCCAGCTCCACAGGTAGATGGTGCCCTGTCCACTCCCTTTaGAGGCTGCAGGGAGAGGAGAGAGAGAGTCCAGGCTGGCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SGSSSTGRWCPVHSL*RLQGEERESPGWPP Trigger: TGGTGGCCAGCCTGGACTCTCTCTCTCCTCTCCCTGCAGCCTCCAAAGGGAGTGGACAGGGCACCATCTACCTGTGGAGCTGGAGCCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128255.2 |
||
| CDS-3UTR CAA 90 bp | TACCACATGGCGACAGCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCGTTGGCCCAATGCTGTaGGCTGAGGCCACTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: YHMATATLSSLAGHGALPVGPML*AEATSG Trigger: TCCTGAAGTGGCCTCAGCCAACAGCATTGGGCCAAC...GGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGCTGTCGCCATGTGGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS TCA 90 bp | AAAAGTAGGCCAGGTTGGTGGGTGACCACTGCAGCCGGACCAGGATaGCTACGGGCAACACAGACTGTCTGCCCCGGCCTGCCCATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KSRPGWWVTTAAGPG*LRATQTVCPGLPMS Trigger: AGACATGGGCAGGCCGGGGCAGACAGTCTGTGTTGCCCGTAGTCATCCTGGTCCGGCTGCAGTGGTCACCCACCAACCTGGCCTACTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR CAA 90 bp | CACATGGCGACAGCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCCATGGGTTGCCTTCCAGATaGAGCTCCTCAAGTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HMATATLSSLAGHGALPHGLPSR*SSSSSG Trigger: CCCAGAACTTGAGGAGCTCAATCTGGAAGGCAACCC...ATGGGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGCTGTCGCCATGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS TCA 90 bp | TCGCTTGCTGGGAGGAAGGGTGACTGGGTCTTTACCTGGCCGTTTTaGAGCCACCTCTCTGGCCCTGAACTTGGAGGCACCTGCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLAGRKGDWVFTWPF*SHLSGPELGGTCSL Trigger: CAGGCTGCAGGTGCCTCCAAGTTCAGGGCCAGAGAGGTGGCTTCAAAACGGCCAGGTAAAGACCCAGTCACCCTTCCTCCCAGCAAGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS TCA 90 bp | GCCCACAGCTGGGTCTCCAGGTCCTTTGGGCTGTTGTTTCTGCTATaGCACTGCAGGAAGTGCAGGGGTTCCAGGTGTAGGGCAGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AHSWVSRSFGLLFLL*HCRKCRGSRCRAAC Trigger: GCAGGCTGCCCTACACCTGGAACCCCTGCACTTCCTGCAGTGTCATAGCAGAAACAACAGCCCAAAGGACCTGGAGACCCAGCTGTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR CAA 90 bp | GGCTGTGCAGTGTGTGGACTGTCACTCAGACCTGAACCACAGGCTGCTGGGCCTCCCTGTCCACTCCCTTaGGAGGCCACCACATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GCAVCGLSLRPEPQAAGPPCPLP*EATTSS Trigger: TGAAGATGTGGTGGCCTCCAAAGGGAGTGGACAGGG...AGGCCCAGCAGCCTGTGGTTCAGGTCTGAGTGACAGTCCACACACTGCACAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS TCA 90 bp | CTTGTGGCCTGCCTGGGTGACCACCGTGAGGGCTGTCCAGGCCACTaGGAAGAACTCCTCGCCTGGTACCTTGTACTTATGGAGTACGAG | + |
|
Preference number: 5 (lower is better) Translates to: LVACLGDHREGCPGH*EELLAWYLVLMEYE Trigger: CTCGTACTCCATAAGTACAAGGTACCAGGCGAGGAGTTCTTCTCAGTGGCCTGGACAGCCCTCACGGTGGTCACCCAGGCAGGCCACAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS GCA 90 bp | CACAGGCCCACAGCTGGGTCTCCAGGTCCTTTGGGCTGTTGTTTCTaGTATGACACTGCAGGAAGTGCAGGGGTTCCAGGTGTAGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HRPTAGSPGPLGCCF*YDTAGSAGVPGVGQ Trigger: CTGCCCTACACCTGGAACCCCTGCACTTCCTGCAGTGTCATAGCAGAAACAACAGCCCAAAGGACCTGGAGACCCAGCTGTGGGCCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS CCA 90 bp | TCCTCAAGTTCTGGGAACTGGTGCAAGGCAGTGACATCCCCGAGCTaGTTGTTGGTACAGCGAAGGATGCGCAGATGGGACAGGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSSGNWCKAVTSPS*LLVQRRMRRWDRPR Trigger: CCTGGGCCTGTCCCATCTGCGCATCCTTCGCTGTACCAACAACCAGCTCGGGGATGTCACTGCCTTGCACCAGTTCCCAGAACTTGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006301.11 ENSMUST00000150406.2 |
||
| CDS-3UTR CAA 90 bp | CACATGGCGACAGCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCCATAGGAGAAAGGAGACTTaGAGGTTGTCACTGACCGTC | + |
|
Preference number: 5 (lower is better) Translates to: HMATATLSSLAGHGALPHRRKET*RLSLTV Trigger: GACGGTCAGTGACAACCTCAAAGTCTCCTTTCTCCT...ATGGGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGCTGTCGCCATGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR CAA 90 bp | GCGACAGCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCCATTCTGTAGGGTCTCCAGGTCCTTaGGGCTGTTGTTTCTGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: ATATLSSLAGHGALPHSVGSPGP*GCCFCY Trigger: ATAGCAGAAACAACAGCCCAAAGGACCTGGAGACCC...TACAGAATGGGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGCTGTCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR CAA 90 bp | GCCACTCTCAGCTCTCTAGCTGGGCACGGGGCTCTGCCCCATTCTGTACATAGATTGGGGGCTGCAGAGTaGTTGCCTGTGGAGGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ATLSSLAGHGALPHSVHRLGAAE*LPVEAL Trigger: AAGAGCCTCCACAGGCAACAACTCTGCAGCCCCCAA...TCTATGTACAGAATGGGGCAGAGCCCCGTGCCCAGCTAGAGAGCTGAGAGTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS CCA 90 bp | GTGACATCCCCGAGCTGGTTGTTGGTACAGCGAAGGATGCGCAGATaGGACAGGCCCAGGTTAGCAGGCAGCGTCTCCAGCAAGTTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: VTSPSWLLVQRRMRR*DRPRLAGSVSSKLL Trigger: TAACAACTTGCTGGAGACGCTGCCTGCTAACCTGGGCCTGTCCCATCTGCGCATCCTTCGCTGTACCAACAACCAGCTCGGGGATGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006301.11 ENSMUST00000150406.2 |
||
| CDS CCA 90 bp | CCCTGTCCATCAGCTCCCGATCTAGATTCTCCACCTGTGAGCAGGTaGAGGCCGTGTCCTTGCCATTCACCTTACGAAGCTTGGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PCPSAPDLDSPPVSR*RPCPCHSPYEAWAG Trigger: TCCTGCCCAAGCTTCGTAAGGTGAATGGCAAGGACACGGCCTCCACCTGCTCACAGGTGGAGAATCTAGATCGGGAGCTGATGGACAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006301.11 ENSMUST00000150406.2 |
||
| CDS-3UTR CAA 90 bp | AACCCCAGTGGAGCCTGTGTGACTACACTCATTTCCCACTGGCCTCCACTCTACATGTTCCAGCGCTTCTaGTGGCCTGCCTGGGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: NPSGACVTTLISHWPPLYMFQRF*WPAWVT Trigger: GGTCACCCAGGCAGGCCACAAGAAGCGCTGGAACAT...GTAGAGTGGAGGCCAGTGGGAAATGAGTGTAGTCACACAGGCTCCACTGGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS GCA 90 bp | GGCCACGACTGTGTTTATCATGGTCTTGGTCACTGGTTGGCCCAATaGTGTTGGCTGAGGCCACTTCAGGATCTGTGTTGGGGGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GHDCVYHGLGHWLAQ*CWLRPLQDLCWGLQ Trigger: CTGCAGCCCCCAACACAGATCCTGAAGTGGCCTCAGCCAACAGCATTGGGCCAACCAGTGACCAAGACCATGATAAACACAGTCGTGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR CAA 90 bp | CAGAGCAGAAAATGGGGCTGTGCAGTGTGTGGACTGTCACTCAGACCTGAACCAACGTTGCAGGAGCAGTaGCGGCGTGAGAGGAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: QSRKWGCAVCGLSLRPEPTLQEQ*RRERSH Trigger: ATGGCTCCTCTCACGCCGCAACTGCTCCTGCAACGT...TGGTTCAGGTCTGAGTGACAGTCCACACACTGCACAGCCCCATTTTCTGCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR CAA 90 bp | GGCTGTGCAGTGTGTGGACTGTCACTCAGACCTGAACCACAGGCTGCTGGGCCTAAGGAGACTTTGAGGTaGTCACTGACCGTCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GCAVCGLSLRPEPQAAGPKETLR*SLTVRK Trigger: CTTCCTGACGGTCAGTGACAACCTCAAAGTCTCCTT...AGGCCCAGCAGCCTGTGGTTCAGGTCTGAGTGACAGTCCACACACTGCACAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR CAA 90 bp | TCAGACCTGAACCACAGGCTGCTGGGCCTGCCTGAGTTAACCAAGGTAGAAACCGGGACAGAACCACAGTaGAGCGTGAGGAGCTGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: SDLNHRLLGLPELTKVETGTEPQ*SVRSWL Trigger: TAGCCAGCTCCTCACGCTCAACTGTGGTTCTGTCCC...GGTTTCTACCTTGGTTAACTCAGGCAGGCCCAGCAGCCTGTGGTTCAGGTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS GCA 90 bp | CGTGAACTCGATGAGCGACTCAGGGCCGTAACACACATCCCTGACTaGAGACCTCATGAAATCAGCCCGCACCTTGTCAGTTTCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RELDERLRAVTHIPD*RPHEISPHLVSFLL Trigger: GAGGAGGAAACTGACAAGGTGCGGGCTGATTTCATGAGGTCTGCAGTCAGGGATGTGTGTTACGGCCCTGAGTCGCTCATCGAGTTCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006301.11 ENSMUST00000150406.2 |
||
| CDS CCA 90 bp | AGGAAGGGGTTGCCTTCCAGATTGAGCTCCTCAAGTTCTGGGAACTaGTGCAAGGCAGTGACATCCCCGAGCTGGTTGTTGGTACAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: RKGLPSRLSSSSSGN*CKAVTSPSWLLVQR Trigger: TCGCTGTACCAACAACCAGCTCGGGGATGTCACTGCCTTGCACCAGTTCCCAGAACTTGAGGAGCTCAATCTGGAAGGCAACCCCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006301.11 ENSMUST00000150406.2 |
||
| CDS CCA 90 bp | CACTCCCTTTGGAGGCTGCAGGGAGAGGAGAGAGAGAGTCCAGGCTaGCCACCACATCTTCATTCACAAATGCCAGCCCATCGACTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HSLWRLQGEERESPG*PPHLHSQMPAHRLF Trigger: AAAGAGTCGATGGGCTGGCATTTGTGAATGAAGATGTGGTGGCCAGCCTGGACTCTCTCTCTCCTCTCCCTGCAGCCTCCAAAGGGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128255.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGCAGAAAATGGGGCTGTGCAGTGTGTGGACTGTCACTCAGACCTGAACCAACCGTCAGGAAGGGGTaGCCTTCCAGATTGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QSRKWGCAVCGLSLRPEPTVRKG*PSRLSS Trigger: GGAGCTCAATCTGGAAGGCAACCCCTTCCTGACGGT...TGGTTCAGGTCTGAGTGACAGTCCACACACTGCACAGCCCCATTTTCTGCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR CAA 90 bp | GTGGACTGTCACTCAGACCTGAACCACAGGCTGCTGGGCCTGCCTGAGTTAACCTTCACCTTACGAAGCTaGGGCAGGAGAAAGGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: VDCHSDLNHRLLGLPELTFTLRS*GRRKET Trigger: AGTCTCCTTTCTCCTGCCCAAGCTTCGTAAGGTGAA...GGTTAACTCAGGCAGGCCCAGCAGCCTGTGGTTCAGGTCTGAGTGACAGTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS TCA 90 bp | TCAGTTTCCTCCTCAGGGCTCACAGTGGCTATGAACTTCTGCCAGTaGGCTGTGACCCTGTCCATCAGCTCCCGATCTAGATTCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: SVSSSGLTVAMNFCQ*AVTLSISSRSRFST Trigger: GGTGGAGAATCTAGATCGGGAGCTGATGGACAGGGTCACAGCTCACTGGCAGAAGTTCATAGCCACTGTGAGCCCTGAGGAGGAAACTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006301.11 ENSMUST00000150406.2 |
||
| CDS TCA 90 bp | GCCCATCGACTCTTTGTCCTGACACCTTGGAGTCCTCAGAGAAGATaGAGTTCACCTCACACACCCTTTGCTTCTGGGGCTGGTCTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AHRLFVLTPWSPQRR*SSPHTPFASGAGLA Trigger: GGCTAGACCAGCCCCAGAAGCAAAGGGTGTGTGAGGTGAACTTCATCTTCTCTGAGGACTCCAAGGTGTCAGGACAAAGAGTCGATGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006301.11 ENSMUST00000128255.2 |
||
| CDS TCA 90 bp | GTGTTTATCATGGTCTTGGTCACTGGTTGGCCCAATGCTGTTGGCTaGGGCCACTTCAGGATCTGTGTTGGGGGCTGCAGAGTTGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VFIMVLVTGWPNAVG*GHFRICVGGCRVVA Trigger: GGCAACAACTCTGCAGCCCCCAACACAGATCCTGAAGTGGCCTCAGCCAACAGCATTGGGCCAACCAGTGACCAAGACCATGATAAACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS GCA 90 bp | GGACACGATGTTGGAGTCTGTCAGGGCAGTGAGGTAGGTGAAGGCTaGATTGGCCACGACTGTGTTTATCATGGTCTTGGTCACTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GHDVGVCQGSEVGEG*IGHDCVYHGLGHWL Trigger: CAACCAGTGACCAAGACCATGATAAACACAGTCGTGGCCAATGCAGCCTTCACCTACCTCACTGCCCTGACAGACTCCAACATCGTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS CCA 90 bp | GACTGTGTTTATCATGGTCTTGGTCACTGGTTGGCCCAATGCTGTTaGCTGAGGCCACTTCAGGATCTGTGTTGGGGGCTGCAGAGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: DCVYHGLGHWLAQCC*LRPLQDLCWGLQSC Trigger: ACAACTCTGCAGCCCCCAACACAGATCCTGAAGTGGCCTCAGCCAACAGCATTGGGCCAACCAGTGACCAAGACCATGATAAACACAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS CCA 90 bp | GAAGGCTGCATTGGCCACGACTGTGTTTATCATGGTCTTGGTCACTaGTTGGCCCAATGCTGTTGGCTGAGGCCACTTCAGGATCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: EGCIGHDCVYHGLGH*LAQCCWLRPLQDLC Trigger: ACACAGATCCTGAAGTGGCCTCAGCCAACAGCATTGGGCCAACCAGTGACCAAGACCATGATAAACACAGTCGTGGCCAATGCAGCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR CAA 90 bp | TCAGACCTGAACCACAGGCTGCTGGGCCTGCCTGAGTTAACCAAGGTAGAAACCAGCGTCTCCAGCAAGTaGTTAGAGAGGTCAAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SDLNHRLLGLPELTKVETSVSSK*LERSSS Trigger: GGAACTTGACCTCTCTAACAACTTGCTGGAGACGCT...GGTTTCTACCTTGGTTAACTCAGGCAGGCCCAGCAGCCTGTGGTTCAGGTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR CAA 90 bp | AGAAACCCCAGTGGAGCCTGTGTGACTACACTCATTTCCCACTGGCCTCCACTCCTTTGTCCTGACACCTaGGAGTCCTCAGAGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: RNPSGACVTTLISHWPPLLCPDT*ESSEKM Trigger: CATCTTCTCTGAGGACTCCAAGGTGTCAGGACAAAG...GAGTGGAGGCCAGTGGGAAATGAGTGTAGTCACACAGGCTCCACTGGGGTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS-3UTR CAA 90 bp | AGAGCAGAAAATGGGGCTGTGCAGTGTGTGGACTGTCACTCAGACCTGAACCACGTGTTTATCATGGTCTaGGTCACTGGTTGGCCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: RAENGAVQCVDCHSDLNHVFIMV*VTGWPN Trigger: ATTGGGCCAACCAGTGACCAAGACCATGATAAACAC...GTGGTTCAGGTCTGAGTGACAGTCCACACACTGCACAGCCCCATTTTCTGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS TCA 90 bp | CACCACATCTTCATTCACAAATGCCAGCCCATCGACTCTTTGTCCTaGCACCTTGGAGTCCTCAGAGAAGATGAAGTTCACCTCACACAC | + |
|
Preference number: 5 (lower is better) Translates to: HHIFIHKCQPIDSLS*HLGVLREDEVHLTH Trigger: GTGTGTGAGGTGAACTTCATCTTCTCTGAGGACTCCAAGGTGTCAGGACAAAGAGTCGATGGGCTGGCATTTGTGAATGAAGATGTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006301.11 ENSMUST00000128255.2 |
||
| CDS GCA 72 bp | GCCCGGATGACGCTGCAGCAGAAGCCTGCGCGAACATaGAGCAGCCGGACCATGCCGCGGAGGCCTGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: ARMTLQQKPART*SSRTMPRRPAA Trigger: AGCTGCAGGCCTCCGCGGCATGGTCCGGCTGCTGCATGTTCGCGCAGGCTTCTGCTGCAGCGTCATCCGGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS CCA 72 bp | CAGCCTCTCCACCACATGTGGCCACGGTCTGGGATGTaGCCCTCGAGTGCCCCTCCTCCCGGGCCGGCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: QPLHHMWPRSGM*PSSAPPPGPAQ Trigger: TTGAGCCGGCCCGGGAGGAGGGGCACTCGAGGGCCACATCCCAGACCGTGGCCACATGTGGTGGAGAGGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS TCA 72 bp | CACGGGGACCTTAGCGTCTTGCACCTGGGCCCCACCTaGGGCCACCAGTTCCTCGGCGATCATCCGCACCCG | + |
|
Preference number: 6 (lower is better) Translates to: HGDLSVLHLGPT*GHQFLGDHPHP Trigger: CGGGTGCGGATGATCGCCGAGGAACTGGTGGCCTCAGGTGGGGCCCAGGTGCAAGACGCTAAGGTCCCCGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS CAA 90 bp | ACCATGCCGCGGAGGCCTGCAGCTGCTAGCATGTTCCAGCGCTTCTaGTGGCCTGCCTGGGTGACCACCGTGAGGGCTGTCCAGGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: TMPRRPAAASMFQRF*WPAWVTTVRAVQAT Trigger: AGTGGCCTGGACAGCCCTCACGGTGGTCACCCAGGCAGGCCACAAGAAGCGCTGGAACATGCTAGCAGCTGCAGGCCTCCGCGGCATGGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS TCA 72 bp | CCAGGTTGGTGGGTGACCACTGCAGCCGGACCAGGATaGCTACGGGCAACACAGACTGTCTGCCCCGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PGWWVTTAAGPG*LRATQTVCPGL Trigger: CAGGCCGGGGCAGACAGTCTGTGTTGCCCGTAGTCATCCTGGTCCGGCTGCAGTGGTCACCCACCAACCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS GCA 72 bp | AGCAGAAGCCTGCGCGAACATGCAGCAGCCGGACCATaGCGCGGAGGCCTGCAGCTGCTAGCATGTTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SRSLREHAAAGP*RGGLQLLACSS Trigger: GCTGGAACATGCTAGCAGCTGCAGGCCTCCGCGGCATGGTCCGGCTGCTGCATGTTCGCGCAGGCTTCTGCT 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS GCA 72 bp | CTTCTTATGGGCCCGGATGACGCTGCAGCAGAAGCCTaGGCGAACATGCAGCAGCCGGACCATGCCGCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLMGPDDAAAEA*ANMQQPDHAAE Trigger: CTCCGCGGCATGGTCCGGCTGCTGCATGTTCGCGCAGGCTTCTGCTGCAGCGTCATCCGGGCCCATAAGAAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS CAA 72 bp | CGGAGGCCTGCAGCTGCTAGCATGTTCCAGCGCTTCTaGTGGCCTGCCTGGGTGACCACCGTGAGGGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RRPAAASMFQRF*WPAWVTTVRAV Trigger: GACAGCCCTCACGGTGGTCACCCAGGCAGGCCACAAGAAGCGCTGGAACATGCTAGCAGCTGCAGGCCTCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS CCA 72 bp | ACCTCTCTGGCCCTGAACTTGGAGGCACCTGCAGCCTaGGGATGCTCCACGGGGACCTTAGCGTCTTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: TSLALNLEAPAA*GCSTGTLASCT Trigger: GGTGCAAGACGCTAAGGTCCCCGTGGAGCATCCCCAGGCTGCAGGTGCCTCCAAGTTCAGGGCCAGAGAGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS CCA 72 bp | GCTGCTAGCATGTTCCAGCGCTTCTTGTGGCCTGCCTaGGTGACCACCGTGAGGGCTGTCCAGGCCACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: AASMFQRFLWPA*VTTVRAVQATE Trigger: CTCAGTGGCCTGGACAGCCCTCACGGTGGTCACCCAGGCAGGCCACAAGAAGCGCTGGAACATGCTAGCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS CCA 72 bp | AGGCCTGCAGCTGCTAGCATGTTCCAGCGCTTCTTGTaGCCTGCCTGGGTGACCACCGTGAGGGCTGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RPAAASMFQRFL*PAWVTTVRAVQ Trigger: CTGGACAGCCCTCACGGTGGTCACCCAGGCAGGCCACAAGAAGCGCTGGAACATGCTAGCAGCTGCAGGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS CCA 72 bp | ATCAGCACCCATAGGACTGCCCTCAGCCTGAGCAGGTaGGAGAGCACGCACTCGCTTGCTGGGAGGAAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: ISTHRTALSLSR*ESTHSLAGRKG Trigger: ACCCTTCCTCCCAGCAAGCGAGTGCGTGCTCTCCCACCTGCTCAGGCTGAGGGCAGTCCTATGGGTGCTGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS CCA 72 bp | TCCTCCCGGGCCGGCTCAAAGGCACAGGCCCACAGCTaGGTCTCCAGGTCCTTTGGGCTGTTGTTTCTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: SSRAGSKAQAHS*VSRSFGLLFLL Trigger: TAGCAGAAACAACAGCCCAAAGGACCTGGAGACCCAGCTGTGGGCCTGTGCCTTTGAGCCGGCCCGGGAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS CCA 72 bp | GGCAGTCTATCACGCAAACAGCCTCTCCACCACATGTaGCCACGGTCTGGGATGTGGCCCTCGAGTGCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: GSLSRKQPLHHM*PRSGMWPSSAP Trigger: AGGGGCACTCGAGGGCCACATCCCAGACCGTGGCCACATGTGGTGGAGAGGCTGTTTGCGTGATAGACTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS TCA 72 bp | AGCAGAGGGTGGCAATGGCCTTCTTATGGGCCCGGATaGCGCTGCAGCAGAAGCCTGCGCGAACATGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SRGWQWPSYGPG*RCSRSLREHAA Trigger: TGCTGCATGTTCGCGCAGGCTTCTGCTGCAGCGTCATCCGGGCCCATAAGAAGGCCATTGCCACCCTCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS GCA 72 bp | GATGACTACGGGCAACACAGACTGTCTGCCCCGGCCTaGCCATGTCTGGCTCCAGCTCCACAGGTAGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: DDYGQHRLSAPA*PCLAPAPQVDG Trigger: ACCATCTACCTGTGGAGCTGGAGCCAGACATGGGCAGGCCGGGGCAGACAGTCTGTGTTGCCCGTAGTCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS CCA 72 bp | CAAGTTCCCTCAGCTTCTTCAGGCGCCCCAGGAGATTaGGATCCAAGTGCTCTGAGAGCAGCTGCAGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: QVPSASSGAPGD*DPSALRAAAAP Trigger: CGGGGCTGCAGCTGCTCTCAGAGCACTTGGATCCCAATCTCCTGGGGCGCCTGAAGAAGCTGAGGGAACTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006301.11 ENSMUST00000150406.2 |
||
| CDS TCA 72 bp | CTTTACCTGGCCGTTTTGAAGCCACCTCTCTGGCCCTaGACTTGGAGGCACCTGCAGCCTGGGGATGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LYLAVLKPPLWP*TWRHLQPGDAP Trigger: TGGAGCATCCCCAGGCTGCAGGTGCCTCCAAGTTCAGGGCCAGAGAGGTGGCTTCAAAACGGCCAGGTAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS TCA 72 bp | GGGAGGAAGGGTGACTGGGTCTTTACCTGGCCGTTTTaGAGCCACCTCTCTGGCCCTGAACTTGGAGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: GRKGDWVFTWPF*SHLSGPELGGT Trigger: GGTGCCTCCAAGTTCAGGGCCAGAGAGGTGGCTTCAAAACGGCCAGGTAAAGACCCAGTCACCCTTCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS GCA 72 bp | CTGCCCATGTCTGGCTCCAGCTCCACAGGTAGATGGTaGCCTGTCCACTCCCTTTGGAGGCCACCACATCTT | + |
|
Preference number: 6 (lower is better) Translates to: LPMSGSSSTGRW*PVHSLWRPPHL Trigger: AAGATGTGGTGGCCTCCAAAGGGAGTGGACAGGGCACCATCTACCTGTGGAGCTGGAGCCAGACATGGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS CAA 72 bp | AACTGGTGCAAGGCAGTGACATCCCCGAGCTGGTTGTaGGTACAGCGAAGGATGCGCAGATGGGACAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: NWCKAVTSPSWL*VQRRMRRWDRP Trigger: GGGCCTGTCCCATCTGCGCATCCTTCGCTGTACCAACAACCAGCTCGGGGATGTCACTGCCTTGCACCAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006301.11 ENSMUST00000150406.2 |
||
| CDS CAA 90 bp | AGTTCTGGGAACTGGTGCAAGGCAGTGACATCCCCGAGCTGGTTGTaGGTACAGCGAAGGATGCGCAGATGGGACAGGCCCAGGTTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSGNWCKAVTSPSWL*VQRRMRRWDRPRLA Trigger: TGCTAACCTGGGCCTGTCCCATCTGCGCATCCTTCGCTGTACCAACAACCAGCTCGGGGATGTCACTGCCTTGCACCAGTTCCCAGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006301.11 ENSMUST00000150406.2 |
||
| CDS CAA 90 bp | TCAAGTTCTGGGAACTGGTGCAAGGCAGTGACATCCCCGAGCTGGTaGTTGGTACAGCGAAGGATGCGCAGATGGGACAGGCCCAGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: SSSGNWCKAVTSPSW*LVQRRMRRWDRPRL Trigger: TAACCTGGGCCTGTCCCATCTGCGCATCCTTCGCTGTACCAACAACCAGCTCGGGGATGTCACTGCCTTGCACCAGTTCCCAGAACTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006301.11 ENSMUST00000150406.2 |
||
| CDS TCA 72 bp | ATGGTCTTGGTCACTGGTTGGCCCAATGCTGTTGGCTaGGGCCACTTCAGGATCTGTGTTGGGGGCTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: MVLVTGWPNAVG*GHFRICVGGCR Trigger: TCTGCAGCCCCCAACACAGATCCTGAAGTGGCCTCAGCCAACAGCATTGGGCCAACCAGTGACCAAGACCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS GCA 72 bp | GATTCTCCACCTGTGAGCAGGTGGAGGCCGTGTCCTTaGCATTCACCTTACGAAGCTTGGGCAGGAGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: DSPPVSRWRPCP*HSPYEAWAGER Trigger: CCTTTCTCCTGCCCAAGCTTCGTAAGGTGAATGGCAAGGACACGGCCTCCACCTGCTCACAGGTGGAGAATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006301.11 ENSMUST00000150406.2 |
||
| CDS CCA 72 bp | TGGAGGCTGCAGGGAGAGGAGAGAGAGAGTCCAGGCTaGCCACCACATCTTCATTCACAAATGCCAGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: WRLQGEERESPG*PPHLHSQMPAH Trigger: ATGGGCTGGCATTTGTGAATGAAGATGTGGTGGCCAGCCTGGACTCTCTCTCTCCTCTCCCTGCAGCCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128255.2 |
||
| CDS CAA 72 bp | CCAATGCTGTTGGCTGAGGCCACTTCAGGATCTGTGTaGGGGGCTGCAGAGTTGTTGCCTGTGGAGGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PMLLAEATSGSV*GAAELLPVEAL Trigger: AAGAGCCTCCACAGGCAACAACTCTGCAGCCCCCAACACAGATCCTGAAGTGGCCTCAGCCAACAGCATTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS CAA 90 bp | TGTGAGCAGGTGGAGGCCGTGTCCTTGCCATTCACCTTACGAAGCTaGGGCAGGAGAAAGGAGACTTTGAGGTTGTCACTGACCGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: CEQVEAVSLPFTLRS*GRRKETLRLSLTVR Trigger: CCTGACGGTCAGTGACAACCTCAAAGTCTCCTTTCTCCTGCCCAAGCTTCGTAAGGTGAATGGCAAGGACACGGCCTCCACCTGCTCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006301.11 ENSMUST00000150406.2 |
||
| CDS CAA 90 bp | GTGAGGGCTGTCCAGGCCACTGAGAAGAACTCCTCGCCTGGTACCTaGTACTTATGGAGTACGAGGCCTGTCTGGCAGTCTATCACGCAA | + |
|
Preference number: 6 (lower is better) Translates to: VRAVQATEKNSSPGT*YLWSTRPVWQSITQ Trigger: TTGCGTGATAGACTGCCAGACAGGCCTCGTACTCCATAAGTACAAGGTACCAGGCGAGGAGTTCTTCTCAGTGGCCTGGACAGCCCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
||
| CDS TCA 72 bp | TCCTCAGGGCTCACAGTGGCTATGAACTTCTGCCAGTaGGCTGTGACCCTGTCCATCAGCTCCCGATCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSGLTVAMNFCQ*AVTLSISSRSR Trigger: TCTAGATCGGGAGCTGATGGACAGGGTCACAGCTCACTGGCAGAAGTTCATAGCCACTGTGAGCCCTGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006301.11 ENSMUST00000150406.2 |
||
| CDS TCA 72 bp | TGGGTCTCCAGGTCCTTTGGGCTGTTGTTTCTGCTATaGCACTGCAGGAAGTGCAGGGGTTCCAGGTGTAGG | + |
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Preference number: 6 (lower is better) Translates to: WVSRSFGLLFLL*HCRKCRGSRCR Trigger: CCTACACCTGGAACCCCTGCACTTCCTGCAGTGTCATAGCAGAAACAACAGCCCAAAGGACCTGGAGACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS GCA 72 bp | GATGAGCGACTCAGGGCCGTAACACACATCCCTGACTaGAGACCTCATGAAATCAGCCCGCACCTTGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: DERLRAVTHIPD*RPHEISPHLVS Trigger: ACTGACAAGGTGCGGGCTGATTTCATGAGGTCTGCAGTCAGGGATGTGTGTTACGGCCCTGAGTCGCTCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006301.11 ENSMUST00000150406.2 |
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| CDS GCA 72 bp | ACAGCTGGGTCTCCAGGTCCTTTGGGCTGTTGTTTCTaGTATGACACTGCAGGAAGTGCAGGGGTTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: TAGSPGPLGCCF*YDTAGSAGVPG Trigger: ACCTGGAACCCCTGCACTTCCTGCAGTGTCATAGCAGAAACAACAGCCCAAAGGACCTGGAGACCCAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS CCA 72 bp | TCAGCTCCCGATCTAGATTCTCCACCTGTGAGCAGGTaGAGGCCGTGTCCTTGCCATTCACCTTACGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: SAPDLDSPPVSR*RPCPCHSPYEA Trigger: AGCTTCGTAAGGTGAATGGCAAGGACACGGCCTCCACCTGCTCACAGGTGGAGAATCTAGATCGGGAGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006301.11 ENSMUST00000150406.2 |
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| CDS CCA 72 bp | TATCATGGTCTTGGTCACTGGTTGGCCCAATGCTGTTaGCTGAGGCCACTTCAGGATCTGTGTTGGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: YHGLGHWLAQCC*LRPLQDLCWGL Trigger: CAGCCCCCAACACAGATCCTGAAGTGGCCTCAGCCAACAGCATTGGGCCAACCAGTGACCAAGACCATGATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS CCA 72 bp | AGGCTGCATTGGCCACGACTGTGTTTATCATGGTCTTaGTCACTGGTTGGCCCAATGCTGTTGGCTGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: RLHWPRLCLSWS*SLVGPMLLAEA Trigger: GGCCTCAGCCAACAGCATTGGGCCAACCAGTGACCAAGACCATGATAAACACAGTCGTGGCCAATGCAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS CAA 72 bp | AGATTCTCCACCTGTGAGCAGGTGGAGGCCGTGTCCTaGCCATTCACCTTACGAAGCTTGGGCAGGAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: RFSTCEQVEAVS*PFTLRSLGRRK Trigger: CTTTCTCCTGCCCAAGCTTCGTAAGGTGAATGGCAAGGACACGGCCTCCACCTGCTCACAGGTGGAGAATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006301.11 ENSMUST00000150406.2 |
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| CDS CAA 72 bp | TCCCTGACTGCAGACCTCATGAAATCAGCCCGCACCTaGTCAGTTTCCTCCTCAGGGCTCACAGTGGCTATG | + |
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Preference number: 6 (lower is better) Translates to: SLTADLMKSART*SVSSSGLTVAM Trigger: CATAGCCACTGTGAGCCCTGAGGAGGAAACTGACAAGGTGCGGGCTGATTTCATGAGGTCTGCAGTCAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006301.11 ENSMUST00000150406.2 |
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| CDS CAA 72 bp | GTCCAGGCCACTGAGAAGAACTCCTCGCCTGGTACCTaGTACTTATGGAGTACGAGGCCTGTCTGGCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: VQATEKNSSPGT*YLWSTRPVWQS Trigger: AGACTGCCAGACAGGCCTCGTACTCCATAAGTACAAGGTACCAGGCGAGGAGTTCTTCTCAGTGGCCTGGAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS CAA 72 bp | GAGGCCACTTCAGGATCTGTGTTGGGGGCTGCAGAGTaGTTGCCTGTGGAGGCTCTTTCAGGAGGTGTTCAA | + |
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Preference number: 6 (lower is better) Translates to: EATSGSVLGAAE*LPVEALSGGVQ Trigger: TTGAACACCTCCTGAAAGAGCCTCCACAGGCAACAACTCTGCAGCCCCCAACACAGATCCTGAAGTGGCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS CAA 90 bp | TCCCGATCTAGATTCTCCACCTGTGAGCAGGTGGAGGCCGTGTCCTaGCCATTCACCTTACGAAGCTTGGGCAGGAGAAAGGAGACTTTG | + |
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Preference number: 6 (lower is better) Translates to: SRSRFSTCEQVEAVS*PFTLRSLGRRKETL Trigger: CAAAGTCTCCTTTCTCCTGCCCAAGCTTCGTAAGGTGAATGGCAAGGACACGGCCTCCACCTGCTCACAGGTGGAGAATCTAGATCGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006301.11 ENSMUST00000150406.2 |
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| CDS CAA 90 bp | GGCTGCATTGGCCACGACTGTGTTTATCATGGTCTTGGTCACTGGTaGGCCCAATGCTGTTGGCTGAGGCCACTTCAGGATCTGTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: GCIGHDCVYHGLGHW*AQCCWLRPLQDLCW Trigger: CCAACACAGATCCTGAAGTGGCCTCAGCCAACAGCATTGGGCCAACCAGTGACCAAGACCATGATAAACACAGTCGTGGCCAATGCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS GCA 72 bp | CCACTTCAGGATCTGTGTTGGGGGCTGCAGAGTTGTTaGCTGTGGAGGCTCTTTCAGGAGGTGTTCAACATC | + |
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Preference number: 6 (lower is better) Translates to: PLQDLCWGLQSC*LWRLFQEVFNI Trigger: GATGTTGAACACCTCCTGAAAGAGCCTCCACAGGCAACAACTCTGCAGCCCCCAACACAGATCCTGAAGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS CCA 72 bp | TTGCCTTCCAGATTGAGCTCCTCAAGTTCTGGGAACTaGTGCAAGGCAGTGACATCCCCGAGCTGGTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: LPSRLSSSSSGN*CKAVTSPSWLL Trigger: CAACAACCAGCTCGGGGATGTCACTGCCTTGCACCAGTTCCCAGAACTTGAGGAGCTCAATCTGGAAGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006301.11 ENSMUST00000150406.2 |
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| CDS CAA 72 bp | GTGGAGGCCGTGTCCTTGCCATTCACCTTACGAAGCTaGGGCAGGAGAAAGGAGACTTTGAGGTTGTCACTG | + |
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Preference number: 6 (lower is better) Translates to: VEAVSLPFTLRS*GRRKETLRLSL Trigger: CAGTGACAACCTCAAAGTCTCCTTTCTCCTGCCCAAGCTTCGTAAGGTGAATGGCAAGGACACGGCCTCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006301.11 ENSMUST00000150406.2 |
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| CDS CAA 72 bp | GCCACTTCAGGATCTGTGTTGGGGGCTGCAGAGTTGTaGCCTGTGGAGGCTCTTTCAGGAGGTGTTCAACAT | + |
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Preference number: 6 (lower is better) Translates to: ATSGSVLGAAEL*PVEALSGGVQH Trigger: ATGTTGAACACCTCCTGAAAGAGCCTCCACAGGCAACAACTCTGCAGCCCCCAACACAGATCCTGAAGTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS CCA 72 bp | ATTGGCCACGACTGTGTTTATCATGGTCTTGGTCACTaGTTGGCCCAATGCTGTTGGCTGAGGCCACTTCAG | + |
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Preference number: 6 (lower is better) Translates to: IGHDCVYHGLGH*LAQCCWLRPLQ Trigger: CTGAAGTGGCCTCAGCCAACAGCATTGGGCCAACCAGTGACCAAGACCATGATAAACACAGTCGTGGCCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS CAA 72 bp | GAGACTTTGAGGTTGTCACTGACCGTCAGGAAGGGGTaGCCTTCCAGATTGAGCTCCTCAAGTTCTGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: ETLRLSLTVRKG*PSRLSSSSSGN Trigger: GTTCCCAGAACTTGAGGAGCTCAATCTGGAAGGCAACCCCTTCCTGACGGTCAGTGACAACCTCAAAGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006301.11 ENSMUST00000150406.2 |
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| CDS CCA 72 bp | CAGGATCTGTGTTGGGGGCTGCAGAGTTGTTGCCTGTaGAGGCTCTTTCAGGAGGTGTTCAACATCATAGAT | + |
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Preference number: 6 (lower is better) Translates to: QDLCWGLQSCCL*RLFQEVFNIID Trigger: ATCTATGATGTTGAACACCTCCTGAAAGAGCCTCCACAGGCAACAACTCTGCAGCCCCCAACACAGATCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006301.11 |
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| CDS CAA 72 bp | ACAAATGCCAGCCCATCGACTCTTTGTCCTGACACCTaGGAGTCCTCAGAGAAGATGAAGTTCACCTCACAC | + |
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Preference number: 6 (lower is better) Translates to: TNASPSTLCPDT*ESSEKMKFTSH Trigger: GTGTGAGGTGAACTTCATCTTCTCTGAGGACTCCAAGGTGTCAGGACAAAGAGTCGATGGGCTGGCATTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006301.11 ENSMUST00000128255.2 |
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| CDS TCA 72 bp | TTCATTCACAAATGCCAGCCCATCGACTCTTTGTCCTaGCACCTTGGAGTCCTCAGAGAAGATGAAGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: FIHKCQPIDSLS*HLGVLREDEVH Trigger: GTGAACTTCATCTTCTCTGAGGACTCCAAGGTGTCAGGACAAAGAGTCGATGGGCTGGCATTTGTGAATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006301.11 ENSMUST00000128255.2 |
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