Pregenerated sensors for LRTM1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000045776

Ensembl transcript IDs: ENSMUST00000055662.4, ENSMUST00000224708.2, ENSMUST00000224760.2

Found 206 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	TACCCCAGTGATGACCACAGTAGCCACAGCATGGCGCAGGTTGGTTaGCTTTGGTTTGGGTTTGGCCTCACACTCCAAGGGATCTTGCTG	+
Preference number: 1 (lower is better) Translates to: YPSDDHSSHSMAQVG*LWFGFGLTLQGILL Trigger: CAGCAAGATCCCTTGGAGTGTGAGGCCAAACCCAAACCAAAGCCAACCAACCTGCGCCATGCTGTGGCTACTGTGGTCATCACTGGGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224760.2
3UTR CCA 90 bp	ACGATCCCACATACTACCCCAGTGATGACCACAGTAGCCACAGCATaGCGCAGGTTGGTTGGCTTTGGTTTGGGTTTGGCCTCACACTCC	+
Preference number: 1 (lower is better) Translates to: TIPHTTPVMTTVATA*RRLVGFGLGLASHS Trigger: GGAGTGTGAGGCCAAACCCAAACCAAAGCCAACCAACCTGCGCCATGCTGTGGCTACTGTGGTCATCACTGGGGTAGTATGTGGGATCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224760.2
3UTR CCA 90 bp	GGCAGAGGGGGTCTGTCTTCAGTAGTTCTCAGTGAACTTCAGCAATaGGGTTTGACTTCCAGGAGCCTTCTGCAGGATGCTCAGGTGTGG	+
Preference number: 1 (lower is better) Translates to: GRGGLSSVVLSELQQ*GLTSRSLLQDAQVW Trigger: CCACACCTGAGCATCCTGCAGAAGGCTCCTGGAAGTCAAACCCCATTGCTGAAGTTCACTGAGAACTACTGAAGACAGACCCCCTCTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR TCA 90 bp	GGTAGAGGTGGGCAGCTCTGGCTGGAATCAGAACCAGTGTCTGGATaGGCTCAAACCCTCCATGGTAGAGAGAGTATGGATGGAGAACTC	+
Preference number: 1 (lower is better) Translates to: GRGGQLWLESEPVSG*AQTLHGRESMDGEL Trigger: GAGTTCTCCATCCATACTCTCTCTACCATGGAGGGTTTGAGCTCATCCAGACACTGGTTCTGATTCCAGCCAGAGCTGCCCACCTCTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR GCA 90 bp	GCTACCTTGGCACAAAAGAGAGATGTCAGGGCAAATGACAGCCCATaGAGCTGTGGGCCTTTGCTGGGAAATCTTGGTGTGCTGTTCCCT	+
Preference number: 1 (lower is better) Translates to: ATLAQKRDVRANDSP*SCGPLLGNLGVLFP Trigger: AGGGAACAGCACACCAAGATTTCCCAGCAAAGGCCCACAGCTGCATGGGCTGTCATTTGCCCTGACATCTCTCTTTTGTGCCAAGGTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR TCA 90 bp	CGTGGGTTATCATCTGTACATCGACATCTAATAGGATCAGGGTGTTaGCAGGCGAGGGTTTGCGCCACGTTCATGGTTTGCGCAGTGTAC	+
Preference number: 1 (lower is better) Translates to: RGLSSVHRHLIGSGC*QARVCATFMVCAVY Trigger: GTACACTGCGCAAACCATGAACGTGGCGCAAACCCTCGCCTGTCAACACCCTGATCCTATTAGATGTCGATGTACAGATGATAACCCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR GCA 90 bp	CTGTACAAATCCATGCCCTCTGTGCACTGCAGATGTAGATGTGGATaGAGAGACACAGCCACCATTCAGCCTAAGCAAAAGCCATCCCTG	+
Preference number: 1 (lower is better) Translates to: LYKSMPSVHCRCRCG*RDTATIQPKQKPSL Trigger: CAGGGATGGCTTTTGCTTAGGCTGAATGGTGGCTGTGTCTCTGCATCCACATCTACATCTGCAGTGCACAGAGGGCATGGATTTGTACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR CCA 90 bp	GCAGAGACACAGCCACCATTCAGCCTAAGCAAAAGCCATCCCTGCTaGGAGAGTTCTAGGATAAGGTTCCCATTGCTTGGTGGATATGGT	+
Preference number: 1 (lower is better) Translates to: AETQPPFSLSKSHPC*ESSRIRFPLLGGYG Trigger: ACCATATCCACCAAGCAATGGGAACCTTATCCTAGAACTCTCCCAGCAGGGATGGCTTTTGCTTAGGCTGAATGGTGGCTGTGTCTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR TCA 90 bp	GTTGAATTGAGCTACCTTGGCACAAAAGAGAGATGTCAGGGCAAATaGCAGCCCATGCAGCTGTGGGCCTTTGCTGGGAAATCTTGGTGT	+
Preference number: 1 (lower is better) Translates to: VELSYLGTKERCQGK*QPMQLWAFAGKSWC Trigger: ACACCAAGATTTCCCAGCAAAGGCCCACAGCTGCATGGGCTGTCATTTGCCCTGACATCTCTCTTTTGTGCCAAGGTAGCTCAATTCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR TCA 90 bp	ACTGAAGAGCAAGGGAGGGCAAGCACAGAGACAACATCCAGCATCTaGGCAACCTGCAGTGATGCACATGTGCATTACAACAAAGCCTGT	+
Preference number: 1 (lower is better) Translates to: TEEQGRASTETTSSI*ATCSDAHVHYNKAC Trigger: ACAGGCTTTGTTGTAATGCACATGTGCATCACTGCAGGTTGCTCAGATGCTGGATGTTGTCTCTGTGCTTGCCCTCCCTTGCTCTTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR GCA 90 bp	GATGCAGAGACACAGCCACCATTCAGCCTAAGCAAAAGCCATCCCTaGTGGGAGAGTTCTAGGATAAGGTTCCCATTGCTTGGTGGATAT	+
Preference number: 1 (lower is better) Translates to: DAETQPPFSLSKSHP*WESSRIRFPLLGGY Trigger: ATATCCACCAAGCAATGGGAACCTTATCCTAGAACTCTCCCAGCAGGGATGGCTTTTGCTTAGGCTGAATGGTGGCTGTGTCTCTGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR GCA 90 bp	AGGGTGTTTATGTGTGGGTGTAGCTGTACAAATCCATGCCCTCTGTaGACTGCAGATGTAGATGTGGATGCAGAGACACAGCCACCATTC	+
Preference number: 1 (lower is better) Translates to: RVFMCGCSCTNPCPL*TADVDVDAETQPPF Trigger: GAATGGTGGCTGTGTCTCTGCATCCACATCTACATCTGCAGTGCACAGAGGGCATGGATTTGTACAGCTACACCCACACATAAACACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR CCA 90 bp	AAACTTCCTTCTTATTTCCTATCCCAGAGTGTTGAGCATACAATCTaGGTGGTGATCAACAGCTACTGGCTCCCACCCGACACGGCTGCA	+
Preference number: 1 (lower is better) Translates to: KLPSYFLSQSVEHTI*VVINSYWLPPDTAA Trigger: TGCAGCCGTGTCGGGTGGGAGCCAGTAGCTGTTGATCACCACCCAGATTGTATGCTCAACACTCTGGGATAGGAAATAAGAAGGAAGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR GCA 90 bp	ATTGCTCCAAGGGTGTTTATGTGTGGGTGTAGCTGTACAAATCCATaGCCTCTGTGCACTGCAGATGTAGATGTGGATGCAGAGACACAG	+
Preference number: 1 (lower is better) Translates to: IAPRVFMCGCSCTNP*PLCTADVDVDAETQ Trigger: CTGTGTCTCTGCATCCACATCTACATCTGCAGTGCACAGAGGGCATGGATTTGTACAGCTACACCCACACATAAACACCCTTGGAGCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR CCA 90 bp	AACCAGTGTCTGGATGAGCTCAAACCCTCCATGGTAGAGAGAGTATaGATGGAGAACTCTGGGTCCTCTGACATTTACAAGCTAGAGAAC	+
Preference number: 1 (lower is better) Translates to: NQCLDELKPSMVERV*MENSGSSDIYKLEN Trigger: GTTCTCTAGCTTGTAAATGTCAGAGGACCCAGAGTTCTCCATCCATACTCTCTCTACCATGGAGGGTTTGAGCTCATCCAGACACTGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR GCA 90 bp	TATTCTAGTTTACTATTCTCTCTGTGTTCCTTCACATCAAAACCTTaGCCAGGCTCCGGGCCTGAGTCCCATTATCCAGACATGGAACCT	+
Preference number: 1 (lower is better) Translates to: YSSLLFSLCSFTSKP*PGSGPESHYPDMEP Trigger: AGGTTCCATGTCTGGATAATGGGACTCAGGCCCGGAGCCTGGGCAAGGTTTTGATGTGAAGGAACACAGAGAGAATAGTAAACTAGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR CCA 90 bp	CTCCTCGTGCTTAAAGACTACCTATTAAGCCAGAGGCCTTTTGCGTaGGTTATCATCTGTACATCGACATCTAATAGGATCAGGGTGTTG	+
Preference number: 1 (lower is better) Translates to: LLVLKDYLLSQRPFA*VIICTSTSNRIRVL Trigger: CAACACCCTGATCCTATTAGATGTCGATGTACAGATGATAACCCACGCAAAAGGCCTCTGGCTTAATAGGTAGTCTTTAAGCACGAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR GCA 90 bp	CAGAGACAACATCCAGCATCTGAGCAACCTGCAGTGATGCACATGTaGATTACAACAAAGCCTGTTCTTTTGTTACTTAGTATGCTAGCC	+
Preference number: 1 (lower is better) Translates to: QRQHPASEQPAVMHM*ITTKPVLLLLSMLA Trigger: GGCTAGCATACTAAGTAACAAAAGAACAGGCTTTGTTGTAATGCACATGTGCATCACTGCAGGTTGCTCAGATGCTGGATGTTGTCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR TCA 90 bp	GAAAGTAGTTGCTACATCCTTAGAATAGAAACTCAGTCACACAGTTaGATTGAGCTACCTTGGCACAAAAGAGAGATGTCAGGGCAAATG	+
Preference number: 1 (lower is better) Translates to: ESSCYILRIETQSHS*IELPWHKREMSGQM Trigger: CATTTGCCCTGACATCTCTCTTTTGTGCCAAGGTAGCTCAATTCAACTGTGTGACTGAGTTTCTATTCTAAGGATGTAGCAACTACTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR-3UTR TCA 90 bp	GGATGCAGAGACACAGCCACCATTCAGCCTAAGCAAAAGCCATCCCTGCTGGGACTCAGACTTCCTGGCTaGTGCCAAGGGTCTCCCTTG	+
Preference number: 2 (lower is better) Translates to: GCRDTATIQPKQKPSLLGLRLPG*CQGSPL Trigger: CAAGGGAGACCCTTGGCATCAGCCAGGAAGTCTGAG...TCCCAGCAGGGATGGCTTTTGCTTAGGCTGAATGGTGGCTGTGTCTCTGCATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224760.2
3UTR-3UTR CCA 90 bp	GGATGCAGAGACACAGCCACCATTCAGCCTAAGCAAAAGCCATCCCTGCTGGGAGCCAAGGGTCTCCCTTaGTACTGGGCTGTGATGGCT	+
Preference number: 2 (lower is better) Translates to: GCRDTATIQPKQKPSLLGAKGLP*YWAVMA Trigger: AGCCATCACAGCCCAGTACCAAGGGAGACCCTTGGC...TCCCAGCAGGGATGGCTTTTGCTTAGGCTGAATGGTGGCTGTGTCTCTGCATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224760.2
3UTR CAA 90 bp	ATGACCACAGTAGCCACAGCATGGCGCAGGTTGGTTGGCTTTGGTTaGGGTTTGGCCTCACACTCCAAGGGATCTTGCTGTCCTGAGCTA	+
Preference number: 2 (lower is better) Translates to: MTTVATAWRRLVGFG*GLASHSKGSCCPEL Trigger: TAGCTCAGGACAGCAAGATCCCTTGGAGTGTGAGGCCAAACCCAAACCAAAGCCAACCAACCTGCGCCATGCTGTGGCTACTGTGGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224760.2
3UTR-3UTR GCA 90 bp	GAGCTACCTTGGCACAAAAGAGAGATGTCAGGGCAAATGACAGCCCATGCAGCTACTAGCCAGGATGTCTaGCCTCCAGTGCCTCGAGTC	+
Preference number: 2 (lower is better) Translates to: ELPWHKREMSGQMTAHAATSQDV*PPVPRV Trigger: GACTCGAGGCACTGGAGGGCAGACATCCTGGCTAGT...AGCTGCATGGGCTGTCATTTGCCCTGACATCTCTCTTTTGTGCCAAGGTAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR CAA 90 bp	TACTGCCTCACTCTCAGCATCACATGGCTGACATGCCCTTCTCCTTaGAGCTTCACTACAGAGAGCTGCAGTGGCTGTGAACTCAGGTCT	+
Preference number: 2 (lower is better) Translates to: YCLTLSITWLTCPSP*SFTTESCSGCELRS Trigger: AGACCTGAGTTCACAGCCACTGCAGCTCTCTGTAGTGAAGCTCAAAGGAGAAGGGCATGTCAGCCATGTGATGCTGAGAGTGAGGCAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR CAA 90 bp	GGGGGTCTGTCTTCAGTAGTTCTCAGTGAACTTCAGCAATGGGGTTaGACTTCCAGGAGCCTTCTGCAGGATGCTCAGGTGTGGATCTCT	+
Preference number: 2 (lower is better) Translates to: GGLSSVVLSELQQWG*TSRSLLQDAQVWIS Trigger: AGAGATCCACACCTGAGCATCCTGCAGAAGGCTCCTGGAAGTCAAACCCCATTGCTGAAGTTCACTGAGAACTACTGAAGACAGACCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR-3UTR TCA 90 bp	GCAAAAACAAAACTGAAGAGCAAGGGAGGGCAAGCACAGAGACAACATCCAGCAGAGCTGCAGTGGCTGTaGACTCAGGTCTCTGCAGGA	+
Preference number: 2 (lower is better) Translates to: AKTKLKSKGGQAQRQHPAELQWL*TQVSAG Trigger: TCCTGCAGAGACCTGAGTTCACAGCCACTGCAGCTC...TGCTGGATGTTGTCTCTGTGCTTGCCCTCCCTTGCTCTTCAGTTTTGTTTTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR-3UTR GCA 90 bp	ATCTGGGTGGTGATCAACAGCTACTGGCTCCCACCCGACACGGCTGCATTTCATAGCAAAAGCCATCCCTaGTGGGAGAGTTCTAGGATA	+
Preference number: 2 (lower is better) Translates to: IWVVINSYWLPPDTAAFHSKSHP*WESSRI Trigger: TATCCTAGAACTCTCCCAGCAGGGATGGCTTTTGCT...ATGAAATGCAGCCGTGTCGGGTGGGAGCCAGTAGCTGTTGATCACCACCCAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR-3UTR CCA 90 bp	AGTGGCTGTGAACTCAGGTCTCTGCAGGAGCAGAAATCACCTGCCTGTCACCACAAAAGCCATCCCTGCTaGGAGAGTTCTAGGATAAGG	+
Preference number: 2 (lower is better) Translates to: SGCELRSLQEQKSPACHHKSHPC*ESSRIR Trigger: CCTTATCCTAGAACTCTCCCAGCAGGGATGGCTTTT...GTGGTGACAGGCAGGTGATTTCTGCTCCTGCAGAGACCTGAGTTCACAGCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR-3UTR CCA 90 bp	GAGCTACCTTGGCACAAAAGAGAGATGTCAGGGCAAATGACAGCCCATGCAGCTACAGTAGCCACAGCATaGCGCAGGTTGGTTGGCTTT	+
Preference number: 2 (lower is better) Translates to: ELPWHKREMSGQMTAHAATVATA*RRLVGF Trigger: AAAGCCAACCAACCTGCGCCATGCTGTGGCTACTGT...AGCTGCATGGGCTGTCATTTGCCCTGACATCTCTCTTTTGTGCCAAGGTAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224760.2
3UTR CAA 90 bp	GCGTGGGTTATCATCTGTACATCGACATCTAATAGGATCAGGGTGTaGACAGGCGAGGGTTTGCGCCACGTTCATGGTTTGCGCAGTGTA	+
Preference number: 2 (lower is better) Translates to: AWVIICTSTSNRIRV*TGEGLRHVHGLRSV Trigger: TACACTGCGCAAACCATGAACGTGGCGCAAACCCTCGCCTGTCAACACCCTGATCCTATTAGATGTCGATGTACAGATGATAACCCACGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR-3UTR GCA 90 bp	GCAAAAACAAAACTGAAGAGCAAGGGAGGGCAAGCACAGAGACAACATCCAGCATTCACATCAAAACCTTaGCCAGGCTCCGGGCCTGAG	+
Preference number: 2 (lower is better) Translates to: AKTKLKSKGGQAQRQHPAFTSKP*PGSGPE Trigger: CTCAGGCCCGGAGCCTGGGCAAGGTTTTGATGTGAA...TGCTGGATGTTGTCTCTGTGCTTGCCCTCCCTTGCTCTTCAGTTTTGTTTTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR-3UTR GCA 90 bp	GGATGCAGAGACACAGCCACCATTCAGCCTAAGCAAAAGCCATCCCTGCTGGGAAGATGTAGATGTGGATaGAGAGACACAGCCACCATT	+
Preference number: 2 (lower is better) Translates to: GCRDTATIQPKQKPSLLGRCRCG*RDTATI Trigger: AATGGTGGCTGTGTCTCTGCATCCACATCTACATCT...TCCCAGCAGGGATGGCTTTTGCTTAGGCTGAATGGTGGCTGTGTCTCTGCATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR-3UTR CCA 90 bp	AGTGGCTGTGAACTCAGGTCTCTGCAGGAGCAGAAATCACCTGCCTGTCACCACTTTGCTGGGAAATCTTaGTGTGCTGTTCCCTTACAC	+
Preference number: 2 (lower is better) Translates to: SGCELRSLQEQKSPACHHFAGKS*CAVPLH Trigger: GTGTAAGGGAACAGCACACCAAGATTTCCCAGCAAA...GTGGTGACAGGCAGGTGATTTCTGCTCCTGCAGAGACCTGAGTTCACAGCCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR-3UTR CCA 90 bp	GAGCTACCTTGGCACAAAAGAGAGATGTCAGGGCAAATGACAGCCCATGCAGCTCAGGTTGGTTGGCTTTaGTTTGGGTTTGGCCTCACA	+
Preference number: 2 (lower is better) Translates to: ELPWHKREMSGQMTAHAAQVGWL*FGFGLT Trigger: TGTGAGGCCAAACCCAAACCAAAGCCAACCAACCTG...AGCTGCATGGGCTGTCATTTGCCCTGACATCTCTCTTTTGTGCCAAGGTAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224760.2
3UTR-3UTR TCA 90 bp	AGTCAGGACAGGAACTTAAAGGCAGGAACTGAGGCAGAAACCACTGGCTTCTCTATTTTTACATGGCCTTaGGGGGTGAAGTCGAGCCAG	+
Preference number: 2 (lower is better) Translates to: SQDRNLKAGTEAETTGFSIFTWP*GVKSSQ Trigger: CTGGCTCGACTTCACCCCTCAAGGCCATGTAAAAAT...AGAGAAGCCAGTGGTTTCTGCCTCAGTTCCTGCCTTTAAGTTCCTGTCCTGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR-3UTR TCA 90 bp	CATCCCTGCTGGGAGAGTTCTAGGATAAGGTTCCCATTGCTTGGTGGATATGGTCAGCCGCCAACATCATaGGACATACGATCCCACATA	+
Preference number: 2 (lower is better) Translates to: HPCWESSRIRFPLLGGYGQPPTS*DIRSHI Trigger: TATGTGGGATCGTATGTCTCATGATGTTGGCGGCTG...ACCATATCCACCAAGCAATGGGAACCTTATCCTAGAACTCTCCCAGCAGGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224760.2
3UTR-3UTR CCA 90 bp	GAGCTACCTTGGCACAAAAGAGAGATGTCAGGGCAAATGACAGCCCATGCAGCTCTCAGACTAAGTCTGTaGACTCTGCAAGCCATACCT	+
Preference number: 2 (lower is better) Translates to: ELPWHKREMSGQMTAHAALRLSL*TLQAIP Trigger: AGGTATGGCTTGCAGAGTCCACAGACTTAGTCTGAG...AGCTGCATGGGCTGTCATTTGCCCTGACATCTCTCTTTTGTGCCAAGGTAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR-3UTR GCA 90 bp	AGTGGCTGTGAACTCAGGTCTCTGCAGGAGCAGAAATCACCTGCCTGTCACCACAGTAATTATTTTCACTaGCAACTGCTGTGTGTGGTG	+
Preference number: 2 (lower is better) Translates to: SGCELRSLQEQKSPACHHSNYFH*QLLCVV Trigger: CACCACACACAGCAGTTGGCAGTGAAAATAATTACT...GTGGTGACAGGCAGGTGATTTCTGCTCCTGCAGAGACCTGAGTTCACAGCCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR-3UTR TCA 90 bp	GCAAAAACAAAACTGAAGAGCAAGGGAGGGCAAGCACAGAGACAACATCCAGCAACTCAGTCACACAGTTaGATTGAGCTACCTTGGCAC	+
Preference number: 2 (lower is better) Translates to: AKTKLKSKGGQAQRQHPATQSHS*IELPWH Trigger: GTGCCAAGGTAGCTCAATTCAACTGTGTGACTGAGT...TGCTGGATGTTGTCTCTGTGCTTGCCCTCCCTTGCTCTTCAGTTTTGTTTTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR-3UTR GCA 90 bp	ATCTGGGTGGTGATCAACAGCTACTGGCTCCCACCCGACACGGCTGCATTTCATGAATTCTTATTGCTCTaGAGAATCCAGCTTAATCCA	+
Preference number: 2 (lower is better) Translates to: IWVVINSYWLPPDTAAFHEFLLL*RIQLNP Trigger: TGGATTAAGCTGGATTCTGCAGAGCAATAAGAATTC...ATGAAATGCAGCCGTGTCGGGTGGGAGCCAGTAGCTGTTGATCACCACCCAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR-3UTR GCA 90 bp	CTTTTGCTTTCTAGGCTCATGTGCAATGGGACAGTAGACACCTATGGTTTTCATGCAGCTGTGGGCCTTTaGTGGGAAATCTTGGTGTGC	+
Preference number: 2 (lower is better) Translates to: LLLSRLMCNGTVDTYGFHAAVGL*WEILVC Trigger: GCACACCAAGATTTCCCAGCAAAGGCCCACAGCTGC...ATGAAAACCATAGGTGTCTACTGTCCCATTGCACATGAGCCTAGAAAGCAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR-3UTR CCA 90 bp	GAGCTACCTTGGCACAAAAGAGAGATGTCAGGGCAAATGACAGCCCATGCAGCTTTGGAAGATAAAACATaGGACAGGAGCATCGAACAC	+
Preference number: 2 (lower is better) Translates to: ELPWHKREMSGQMTAHAALEDKT*DRSIEH Trigger: GTGTTCGATGCTCCTGTCCCATGTTTTATCTTCCAA...AGCTGCATGGGCTGTCATTTGCCCTGACATCTCTCTTTTGTGCCAAGGTAGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR-3UTR CCA 90 bp	TACAAATCCATGCCCTCTGTGCACTGCAGATGTAGATGTGGATGCAGAGACACAAAAAGCCATCCCTGCTaGGAGAGTTCTAGGATAAGG	+
Preference number: 2 (lower is better) Translates to: YKSMPSVHCRCRCGCRDTKSHPC*ESSRIR Trigger: CCTTATCCTAGAACTCTCCCAGCAGGGATGGCTTTT...TGTGTCTCTGCATCCACATCTACATCTGCAGTGCACAGAGGGCATGGATTTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR CAA 90 bp	AGCAAAAGCCATCCCTGCTGGGAGAGTTCTAGGATAAGGTTCCCATaGCTTGGTGGATATGGTCTCTTGATGATATCTGCCCTGTATTCT	+
Preference number: 2 (lower is better) Translates to: SKSHPCWESSRIRFP*LGGYGLLMISALYS Trigger: AGAATACAGGGCAGATATCATCAAGAGACCATATCCACCAAGCAATGGGAACCTTATCCTAGAACTCTCCCAGCAGGGATGGCTTTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR-3UTR TCA 90 bp	TTTCAGATGACTTTCTCTGAAGCAACACTACACGTGCCTTTTGCCCTGAGCGCCGAGCTGCAGTGCTCATaGAAGATAATTTGTGGTTCT	+
Preference number: 2 (lower is better) Translates to: FQMTFSEATLHVPFALSAELQCS*KIICGS Trigger: AGAACCACAAATTATCTTTCATGAGCACTGCAGCTC...GGCGCTCAGGGCAAAAGGCACGTGTAGTGTTGCTTCAGAGAAAGTCATCTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR-3UTR GCA 90 bp	GAGCTACCTTGGCACAAAAGAGAGATGTCAGGGCAAATGACAGCCCATGCAGCTTGTCCGAATTCTTATTaGTCTGCAGAATCCAGCTTA	+
Preference number: 2 (lower is better) Translates to: ELPWHKREMSGQMTAHAACPNSY*SAESSL Trigger: TAAGCTGGATTCTGCAGAGCAATAAGAATTCGGACA...AGCTGCATGGGCTGTCATTTGCCCTGACATCTCTCTTTTGTGCCAAGGTAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR-3UTR GCA 90 bp	AGTCAGGACAGGAACTTAAAGGCAGGAACTGAGGCAGAAACCACTGGCTTCTCTGTCCATCCCAACATGTaGACATCCCATTTATATTCC	+
Preference number: 2 (lower is better) Translates to: SQDRNLKAGTEAETTGFSVHPNM*TSHLYS Trigger: GGAATATAAATGGGATGTGCACATGTTGGGATGGAC...AGAGAAGCCAGTGGTTTCTGCCTCAGTTCCTGCCTTTAAGTTCCTGTCCTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR-3UTR CCA 90 bp	GCACAAAAGAGAGATGTCAGGGCAAATGACAGCCCATGCAGCTGTGGGCCTTTGCTTAAAAATGCCTATTaGCACACATGTCCGAATTCT	+
Preference number: 2 (lower is better) Translates to: AQKRDVRANDSPCSCGPLLKNAY*HTCPNS Trigger: AGAATTCGGACATGTGTGCCAATAGGCATTTTTAAG...CAAAGGCCCACAGCTGCATGGGCTGTCATTTGCCCTGACATCTCTCTTTTGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR-3UTR CCA 90 bp	CATCCCTGCTGGGAGAGTTCTAGGATAAGGTTCCCATTGCTTGGTGGATATGGTAAGGTTCCCATTGCTTaGTGGATATGGTCTCTTGAT	+
Preference number: 2 (lower is better) Translates to: HPCWESSRIRFPLLGGYGKVPIA*WIWSLD Trigger: ATCAAGAGACCATATCCACCAAGCAATGGGAACCTT...ACCATATCCACCAAGCAATGGGAACCTTATCCTAGAACTCTCCCAGCAGGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR-3UTR TCA 90 bp	CTTTTGCTTTCTAGGCTCATGTGCAATGGGACAGTAGACACCTATGGTTTTCATATACAATCTGGGTGGTaGTCAACAGCTACTGGCTCC	+
Preference number: 2 (lower is better) Translates to: LLLSRLMCNGTVDTYGFHIQSGW*STATGS Trigger: GGAGCCAGTAGCTGTTGATCACCACCCAGATTGTAT...ATGAAAACCATAGGTGTCTACTGTCCCATTGCACATGAGCCTAGAAAGCAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR-3UTR TCA 90 bp	AAAGATAATTTGTGGTTCTTGCAGAATACCCTGAAAACTGGGTCTTTCATCTGCGCATCGCCAAACCACTaGCAGGGCAGAGTACACTTG	+
Preference number: 2 (lower is better) Translates to: KDNLWFLQNTLKTGSFICASPNH*QGRVHL Trigger: CAAGTGTACTCTGCCCTGTCAGTGGTTTGGCGATGC...GCAGATGAAAGACCCAGTTTTCAGGGTATTCTGCAAGAACCACAAATTATCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR-3UTR CCA 90 bp	TACAAATCCATGCCCTCTGTGCACTGCAGATGTAGATGTGGATGCAGAGACACATTGGAAGATAAAACATaGGACAGGAGCATCGAACAC	+
Preference number: 2 (lower is better) Translates to: YKSMPSVHCRCRCGCRDTLEDKT*DRSIEH Trigger: GTGTTCGATGCTCCTGTCCCATGTTTTATCTTCCAA...TGTGTCTCTGCATCCACATCTACATCTGCAGTGCACAGAGGGCATGGATTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR-3UTR CCA 90 bp	TACAAATCCATGCCCTCTGTGCACTGCAGATGTAGATGTGGATGCAGAGACACAAAGGTTCCCATTGCTTaGTGGATATGGTCTCTTGAT	+
Preference number: 2 (lower is better) Translates to: YKSMPSVHCRCRCGCRDTKVPIA*WIWSLD Trigger: ATCAAGAGACCATATCCACCAAGCAATGGGAACCTT...TGTGTCTCTGCATCCACATCTACATCTGCAGTGCACAGAGGGCATGGATTTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR-3UTR CCA 90 bp	CATCCCTGCTGGGAGAGTTCTAGGATAAGGTTCCCATTGCTTGGTGGATATGGTCTTAAAAATGCCTATTaGCACACATGTCCGAATTCT	+
Preference number: 2 (lower is better) Translates to: HPCWESSRIRFPLLGGYGLKNAY*HTCPNS Trigger: AGAATTCGGACATGTGTGCCAATAGGCATTTTTAAG...ACCATATCCACCAAGCAATGGGAACCTTATCCTAGAACTCTCCCAGCAGGGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR-3UTR CCA 90 bp	CTTTTGCTTTCTAGGCTCATGTGCAATGGGACAGTAGACACCTATGGTTTTCATCTCAGACTAAGTCTGTaGACTCTGCAAGCCATACCT	+
Preference number: 2 (lower is better) Translates to: LLLSRLMCNGTVDTYGFHLRLSL*TLQAIP Trigger: AGGTATGGCTTGCAGAGTCCACAGACTTAGTCTGAG...ATGAAAACCATAGGTGTCTACTGTCCCATTGCACATGAGCCTAGAAAGCAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR CAA 90 bp	AACAGCTGTCCATCCCAACATGTGCACATCCCATTTATATTCCGGTaGAGGAGTAGACAACTGACTGGGGATCCAAACCAATTTTTACAT	+
Preference number: 2 (lower is better) Translates to: NSCPSQHVHIPFIFR*RSRQLTGDPNQFLH Trigger: ATGTAAAAATTGGTTTGGATCCCCAGTCAGTTGTCTACTCCTCAACCGGAATATAAATGGGATGTGCACATGTTGGGATGGACAGCTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR-3UTR GCA 90 bp	AGTCAGGACAGGAACTTAAAGGCAGGAACTGAGGCAGAAACCACTGGCTTCTCTAAAATTCACTTTGCATaGAACTCTCTCAGACTAAGT	+
Preference number: 2 (lower is better) Translates to: SQDRNLKAGTEAETTGFSKIHFA*NSLRLS Trigger: ACTTAGTCTGAGAGAGTTGCATGCAAAGTGAATTTT...AGAGAAGCCAGTGGTTTCTGCCTCAGTTCCTGCCTTTAAGTTCCTGTCCTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR-3UTR CCA 90 bp	CTTTTGCTTTCTAGGCTCATGTGCAATGGGACAGTAGACACCTATGGTTTTCATGTTGAGCATACAATCTaGGTGGTGATCAACAGCTAC	+
Preference number: 2 (lower is better) Translates to: LLLSRLMCNGTVDTYGFHVEHTI*VVINSY Trigger: GTAGCTGTTGATCACCACCCAGATTGTATGCTCAAC...ATGAAAACCATAGGTGTCTACTGTCCCATTGCACATGAGCCTAGAAAGCAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR-3UTR TCA 90 bp	CTTTTGCTTTCTAGGCTCATGTGCAATGGGACAGTAGACACCTATGGTTTTCATTCTTGCAGAATACCCTaGAAACTGGGTCTTTCATCT	+
Preference number: 2 (lower is better) Translates to: LLLSRLMCNGTVDTYGFHSCRIP*KLGLSS Trigger: AGATGAAAGACCCAGTTTTCAGGGTATTCTGCAAGA...ATGAAAACCATAGGTGTCTACTGTCCCATTGCACATGAGCCTAGAAAGCAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR-3UTR GCA 90 bp	CTTTTGCTTTCTAGGCTCATGTGCAATGGGACAGTAGACACCTATGGTTTTCATGTTATGCATGCTAACTaGATGCTTCTGCAACTGGAT	+
Preference number: 2 (lower is better) Translates to: LLLSRLMCNGTVDTYGFHVMHAN*MLLQLD Trigger: ATCCAGTTGCAGAAGCATGCAGTTAGCATGCATAAC...ATGAAAACCATAGGTGTCTACTGTCCCATTGCACATGAGCCTAGAAAGCAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR-3UTR CCA 90 bp	AAAATTCACTTTGCATGCAACTCTCTCAGACTAAGTCTGTGGACTCTGCAAGCCATTGCTTGGTGGATATaGTCTCTTGATGATATCTGC	+
Preference number: 2 (lower is better) Translates to: KIHFACNSLRLSLWTLQAIAWWI*SLDDIC Trigger: GCAGATATCATCAAGAGACCATATCCACCAAGCAAT...GGCTTGCAGAGTCCACAGACTTAGTCTGAGAGAGTTGCATGCAAAGTGAATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR-3UTR CCA 90 bp	CTTTTGCTTTCTAGGCTCATGTGCAATGGGACAGTAGACACCTATGGTTTTCATTCTCTTATGGGCACCTaGAAAACAGATTTGAAAGGC	+
Preference number: 2 (lower is better) Translates to: LLLSRLMCNGTVDTYGFHSLMGT*KTDLKG Trigger: GCCTTTCAAATCTGTTTTCCAGGTGCCCATAAGAGA...ATGAAAACCATAGGTGTCTACTGTCCCATTGCACATGAGCCTAGAAAGCAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR CAA 90 bp	GAGAGTTCTAGGATAAGGTTCCCATTGCTTGGTGGATATGGTCTCTaGATGATATCTGCCCTGTATTCTAGTTTACTATTCTCTCTGTGT	+
Preference number: 2 (lower is better) Translates to: ESSRIRFPLLGGYGL*MISALYSSLLFSLC Trigger: ACACAGAGAGAATAGTAAACTAGAATACAGGGCAGATATCATCAAGAGACCATATCCACCAAGCAATGGGAACCTTATCCTAGAACTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR-3UTR GCA 90 bp	AAAGATAATTTGTGGTTCTTGCAGAATACCCTGAAAACTGGGTCTTTCATCTGCTCTTTAACTCCTCTGTaGTCTCTTCCTGTGCAAAAG	+
Preference number: 2 (lower is better) Translates to: KDNLWFLQNTLKTGSFICSLTPL*SLPVQK Trigger: CTTTTGCACAGGAAGAGAGCACAGAGGAGTTAAAGA...GCAGATGAAAGACCCAGTTTTCAGGGTATTCTGCAAGAACCACAAATTATCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR-3UTR GCA 90 bp	TATAATCTGAGTCTTGTGGCCAGCTATGAAATTCCCAACCAACAGACATTTCCAGAATTCTTATTGCTCTaGAGAATCCAGCTTAATCCA	+
Preference number: 2 (lower is better) Translates to: YNLSLVASYEIPNQQTFPEFLLL*RIQLNP Trigger: TGGATTAAGCTGGATTCTGCAGAGCAATAAGAATTC...TGGAAATGTCTGTTGGTTGGGAATTTCATAGCTGGCCACAAGACTCAGATTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR CCA 72 bp	GCCCAGGCTCCGGGCCTGAGTCCCATTATCCAGACATaGAACCTTCATCTTCCCCTGCAGCTTAGAGAGCCC	+
Preference number: 3 (lower is better) Translates to: AQAPGLSPIIQT*NLHLPLQLREP Trigger: GGGCTCTCTAAGCTGCAGGGGAAGATGAAGGTTCCATGTCTGGATAATGGGACTCAGGCCCGGAGCCTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR CCA 72 bp	CAGCATGGCGCAGGTTGGTTGGCTTTGGTTTGGGTTTaGCCTCACACTCCAAGGGATCTTGCTGTCCTGAGC	+
Preference number: 3 (lower is better) Translates to: QHGAGWLALVWV*PHTPRDLAVLS Trigger: GCTCAGGACAGCAAGATCCCTTGGAGTGTGAGGCCAAACCCAAACCAAAGCCAACCAACCTGCGCCATGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224760.2
3UTR CCA 72 bp	CACAGTAGCCACAGCATGGCGCAGGTTGGTTGGCTTTaGTTTGGGTTTGGCCTCACACTCCAAGGGATCTTG	+
Preference number: 3 (lower is better) Translates to: HSSHSMAQVGWL*FGFGLTLQGIL Trigger: CAAGATCCCTTGGAGTGTGAGGCCAAACCCAAACCAAAGCCAACCAACCTGCGCCATGCTGTGGCTACTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224760.2
3UTR CCA 72 bp	CATACTACCCCAGTGATGACCACAGTAGCCACAGCATaGCGCAGGTTGGTTGGCTTTGGTTTGGGTTTGGCC	+
Preference number: 3 (lower is better) Translates to: HTTPVMTTVATA*RRLVGFGLGLA Trigger: GGCCAAACCCAAACCAAAGCCAACCAACCTGCGCCATGCTGTGGCTACTGTGGTCATCACTGGGGTAGTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224760.2
3UTR TCA 72 bp	TGCCCAAGACTCCACGGGGCGAGTGTCAGAATTCTATaGGGAATGCTCATGAGAACAGTGAGCCATGCCTGC	+
Preference number: 3 (lower is better) Translates to: CPRLHGASVRIL*GMLMRTVSHAC Trigger: GCAGGCATGGCTCACTGTTCTCATGAGCATTCCTCATAGAATTCTGACACTCGCCCCGTGGAGTCTTGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR TCA 72 bp	GCCCATGATGGACAAGGAGACCAACGGCAACTGTGCTaGCATTTTCCAGGCCTCAACAGAACGGTCTTCAGG	+
Preference number: 3 (lower is better) Translates to: AHDGQGDQRQLC*HFPGLNRTVFR Trigger: CCTGAAGACCGTTCTGTTGAGGCCTGGAAAATGTCAGCACAGTTGCCGTTGGTCTCCTTGTCCATCATGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR TCA 72 bp	AGCTACCTTGGCACAAAAGAGAGATGTCAGGGCAAATaGCAGCCCATGCAGCTGTGGGCCTTTGCTGGGAAA	+
Preference number: 3 (lower is better) Translates to: SYLGTKERCQGK*QPMQLWAFAGK Trigger: TTTCCCAGCAAAGGCCCACAGCTGCATGGGCTGTCATTTGCCCTGACATCTCTCTTTTGTGCCAAGGTAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR TCA 72 bp	GGGCAGCTCTGGCTGGAATCAGAACCAGTGTCTGGATaGGCTCAAACCCTCCATGGTAGAGAGAGTATGGAT	+
Preference number: 3 (lower is better) Translates to: GQLWLESEPVSG*AQTLHGRESMD Trigger: ATCCATACTCTCTCTACCATGGAGGGTTTGAGCTCATCCAGACACTGGTTCTGATTCCAGCCAGAGCTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR GCA 72 bp	GCACAAAAGAGAGATGTCAGGGCAAATGACAGCCCATaGAGCTGTGGGCCTTTGCTGGGAAATCTTGGTGTG	+
Preference number: 3 (lower is better) Translates to: AQKRDVRANDSP*SCGPLLGNLGV Trigger: CACACCAAGATTTCCCAGCAAAGGCCCACAGCTGCATGGGCTGTCATTTGCCCTGACATCTCTCTTTTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR-3UTR CAA 90 bp	AGTGGCTGTGAACTCAGGTCTCTGCAGGAGCAGAAATCACCTGCCTGTCACCACAGGATAAGGTTCCCATaGCTTGGTGGATATGGTCTC	+
Preference number: 3 (lower is better) Translates to: SGCELRSLQEQKSPACHHRIRFP*LGGYGL Trigger: GAGACCATATCCACCAAGCAATGGGAACCTTATCCT...GTGGTGACAGGCAGGTGATTTCTGCTCCTGCAGAGACCTGAGTTCACAGCCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR-3UTR CAA 90 bp	CATCCCTGCTGGGAGAGTTCTAGGATAAGGTTCCCATTGCTTGGTGGATATGGTACAGCATGGCGCAGGTaGGTTGGCTTTGGTTTGGGT	+
Preference number: 3 (lower is better) Translates to: HPCWESSRIRFPLLGGYGTAWRR*VGFGLG Trigger: ACCCAAACCAAAGCCAACCAACCTGCGCCATGCTGT...ACCATATCCACCAAGCAATGGGAACCTTATCCTAGAACTCTCCCAGCAGGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224760.2
3UTR-3UTR CAA 90 bp	GGATGCAGAGACACAGCCACCATTCAGCCTAAGCAAAAGCCATCCCTGCTGGGAGCGTCGCTCTTCTTTTaGTTCCTACACATAGACTTC	+
Preference number: 3 (lower is better) Translates to: GCRDTATIQPKQKPSLLGASLFF*FLHIDF Trigger: GAAGTCTATGTGTAGGAACAAAAAGAAGAGCGACGC...TCCCAGCAGGGATGGCTTTTGCTTAGGCTGAATGGTGGCTGTGTCTCTGCATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR-3UTR CAA 90 bp	GCACAAAAGAGAGATGTCAGGGCAAATGACAGCCCATGCAGCTGTGGGCCTTTGCCATCTGTGGTATATTaGAGGCTCAGCTGGGAAAAG	+
Preference number: 3 (lower is better) Translates to: AQKRDVRANDSPCSCGPLPSVVY*RLSWEK Trigger: CTTTTCCCAGCTGAGCCTCAAATATACCACAGATGG...CAAAGGCCCACAGCTGCATGGGCTGTCATTTGCCCTGACATCTCTCTTTTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR-3UTR CAA 90 bp	GCACAAAAGAGAGATGTCAGGGCAAATGACAGCCCATGCAGCTGTGGGCCTTTGAATTTTTACATGGCCTaGAGGGGTGAAGTCGAGCCA	+
Preference number: 3 (lower is better) Translates to: AQKRDVRANDSPCSCGPLNFYMA*RGEVEP Trigger: TGGCTCGACTTCACCCCTCAAGGCCATGTAAAAATT...CAAAGGCCCACAGCTGCATGGGCTGTCATTTGCCCTGACATCTCTCTTTTGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR TCA 72 bp	CTCTGCAAGCCATACCTGAACTTTTTAAAGCCATGCTaGAGCACTAGCCAGGATGTCTGCCCTCCAGTGCCT	+
Preference number: 3 (lower is better) Translates to: LCKPYLNFLKPC*STSQDVCPPVP Trigger: AGGCACTGGAGGGCAGACATCCTGGCTAGTGCTTCAGCATGGCTTTAAAAAGTTCAGGTATGGCTTGCAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR TCA 72 bp	ATGAGGCAGAGGGGGTCTGTCTTCAGTAGTTCTCAGTaGACTTCAGCAATGGGGTTTGACTTCCAGGAGCCT	+
Preference number: 3 (lower is better) Translates to: MRQRGSVFSSSQ*TSAMGFDFQEP Trigger: AGGCTCCTGGAAGTCAAACCCCATTGCTGAAGTTCACTGAGAACTACTGAAGACAGACCCCCTCTGCCTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR TCA 72 bp	CAAGGGAGGGCAAGCACAGAGACAACATCCAGCATCTaGGCAACCTGCAGTGATGCACATGTGCATTACAAC	+
Preference number: 3 (lower is better) Translates to: QGRASTETTSSI*ATCSDAHVHYN Trigger: GTTGTAATGCACATGTGCATCACTGCAGGTTGCTCAGATGCTGGATGTTGTCTCTGTGCTTGCCCTCCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR GCA 72 bp	TCCATGCCCTCTGTGCACTGCAGATGTAGATGTGGATaGAGAGACACAGCCACCATTCAGCCTAAGCAAAAG	+
Preference number: 3 (lower is better) Translates to: SMPSVHCRCRCG*RDTATIQPKQK Trigger: CTTTTGCTTAGGCTGAATGGTGGCTGTGTCTCTGCATCCACATCTACATCTGCAGTGCACAGAGGGCATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR CCA 72 bp	CAGCCACCATTCAGCCTAAGCAAAAGCCATCCCTGCTaGGAGAGTTCTAGGATAAGGTTCCCATTGCTTGGT	+
Preference number: 3 (lower is better) Translates to: QPPFSLSKSHPC*ESSRIRFPLLG Trigger: ACCAAGCAATGGGAACCTTATCCTAGAACTCTCCCAGCAGGGATGGCTTTTGCTTAGGCTGAATGGTGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR GCA 72 bp	ACACAGCCACCATTCAGCCTAAGCAAAAGCCATCCCTaGTGGGAGAGTTCTAGGATAAGGTTCCCATTGCTT	+
Preference number: 3 (lower is better) Translates to: TQPPFSLSKSHP*WESSRIRFPLL Trigger: AAGCAATGGGAACCTTATCCTAGAACTCTCCCAGCAGGGATGGCTTTTGCTTAGGCTGAATGGTGGCTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR GCA 72 bp	ATGTGTGGGTGTAGCTGTACAAATCCATGCCCTCTGTaGACTGCAGATGTAGATGTGGATGCAGAGACACAG	+
Preference number: 3 (lower is better) Translates to: MCGCSCTNPCPL*TADVDVDAETQ Trigger: CTGTGTCTCTGCATCCACATCTACATCTGCAGTGCACAGAGGGCATGGATTTGTACAGCTACACCCACACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR CCA 72 bp	TCTTATTTCCTATCCCAGAGTGTTGAGCATACAATCTaGGTGGTGATCAACAGCTACTGGCTCCCACCCGAC	+
Preference number: 3 (lower is better) Translates to: SYFLSQSVEHTI*VVINSYWLPPD Trigger: GTCGGGTGGGAGCCAGTAGCTGTTGATCACCACCCAGATTGTATGCTCAACACTCTGGGATAGGAAATAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR CCA 72 bp	AAATCACTTGTTAGAGGAGGTATGTACTGCTGGCCTTaGGAGTTCTTAGGGCATGTGCTAGCTGCCCAAGAC	+
Preference number: 3 (lower is better) Translates to: KSLVRGGMYCWP*EFLGHVLAAQD Trigger: GTCTTGGGCAGCTAGCACATGCCCTAAGAACTCCCAAGGCCAGCAGTACATACCTCCTCTAACAAGTGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR CCA 72 bp	GGTCTGTCTTCAGTAGTTCTCAGTGAACTTCAGCAATaGGGTTTGACTTCCAGGAGCCTTCTGCAGGATGCT	+
Preference number: 3 (lower is better) Translates to: GLSSVVLSELQQ*GLTSRSLLQDA Trigger: AGCATCCTGCAGAAGGCTCCTGGAAGTCAAACCCCATTGCTGAAGTTCACTGAGAACTACTGAAGACAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR TCA 72 bp	TTGCGCAGTGTACTAGAAACTCTTTTATGTAATCTCTaGGAGGAGAGGGCAAGGCTGATCTGCAGCATCGCC	+
Preference number: 3 (lower is better) Translates to: LRSVLETLLCNL*EERARLICSIA Trigger: GGCGATGCTGCAGATCAGCCTTGCCCTCTCCTCTCAGAGATTACATAAAAGAGTTTCTAGTACACTGCGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR CCA 72 bp	TTGACTTCCAGGAGCCTTCTGCAGGATGCTCAGGTGTaGATCTCTTTTCAGGTCTCTGTTCTCATAAGGCAA	+
Preference number: 3 (lower is better) Translates to: LTSRSLLQDAQV*ISFQVSVLIRQ Trigger: TTGCCTTATGAGAACAGAGACCTGAAAAGAGATCCACACCTGAGCATCCTGCAGAAGGCTCCTGGAAGTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR CCA 72 bp	CTGGATGAGCTCAAACCCTCCATGGTAGAGAGAGTATaGATGGAGAACTCTGGGTCCTCTGACATTTACAAG	+
Preference number: 3 (lower is better) Translates to: LDELKPSMVERV*MENSGSSDIYK Trigger: CTTGTAAATGTCAGAGGACCCAGAGTTCTCCATCCATACTCTCTCTACCATGGAGGGTTTGAGCTCATCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR-3UTR CAA 90 bp	GCAAAAACAAAACTGAAGAGCAAGGGAGGGCAAGCACAGAGACAACATCCAGCAAATTTTTACATGGCCTaGAGGGGTGAAGTCGAGCCA	+
Preference number: 3 (lower is better) Translates to: AKTKLKSKGGQAQRQHPANFYMA*RGEVEP Trigger: TGGCTCGACTTCACCCCTCAAGGCCATGTAAAAATT...TGCTGGATGTTGTCTCTGTGCTTGCCCTCCCTTGCTCTTCAGTTTTGTTTTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR-3UTR CAA 90 bp	TATAATCTGAGTCTTGTGGCCAGCTATGAAATTCCCAACCAACAGACATTTCCAGGCTTTGGTTTGGGTTaGGCCTCACACTCCAAGGGA	+
Preference number: 3 (lower is better) Translates to: YNLSLVASYEIPNQQTFPGFGLG*ASHSKG Trigger: TCCCTTGGAGTGTGAGGCCAAACCCAAACCAAAGCC...TGGAAATGTCTGTTGGTTGGGAATTTCATAGCTGGCCACAAGACTCAGATTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224760.2
3UTR CCA 72 bp	TTTCTTCTCACATACTGCCTCACTCTCAGCATCACATaGCTGACATGCCCTTCTCCTTTGAGCTTCACTACA	+
Preference number: 3 (lower is better) Translates to: FLLTYCLTLSIT*LTCPSPLSFTT Trigger: TGTAGTGAAGCTCAAAGGAGAAGGGCATGTCAGCCATGTGATGCTGAGAGTGAGGCAGTATGTGAGAAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR CCA 72 bp	CAGCCCATGCAGCTGTGGGCCTTTGCTGGGAAATCTTaGTGTGCTGTTCCCTTACACGTTATAATTTTTAAT	+
Preference number: 3 (lower is better) Translates to: QPMQLWAFAGKS*CAVPLHVIIFN Trigger: ATTAAAAATTATAACGTGTAAGGGAACAGCACACCAAGATTTCCCAGCAAAGGCCCACAGCTGCATGGGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR-3UTR CAA 90 bp	GCAAAAACAAAACTGAAGAGCAAGGGAGGGCAAGCACAGAGACAACATCCAGCAGTCATATCTTCTCAGTaGCAAGATATGAGTGTGTCT	+
Preference number: 3 (lower is better) Translates to: AKTKLKSKGGQAQRQHPAVISSQ*QDMSVS Trigger: AGACACACTCATATCTTGCAACTGAGAAGATATGAC...TGCTGGATGTTGTCTCTGTGCTTGCCCTCCCTTGCTCTTCAGTTTTGTTTTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR-3UTR CAA 90 bp	GCAAAAACAAAACTGAAGAGCAAGGGAGGGCAAGCACAGAGACAACATCCAGCACTACACATAGACTTCTaGTCATATCTTCTCAGTTGC	+
Preference number: 3 (lower is better) Translates to: AKTKLKSKGGQAQRQHPALHIDF*SYLLSC Trigger: GCAACTGAGAAGATATGACAAGAAGTCTATGTGTAG...TGCTGGATGTTGTCTCTGTGCTTGCCCTCCCTTGCTCTTCAGTTTTGTTTTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR-3UTR CAA 90 bp	GCAAAAACAAAACTGAAGAGCAAGGGAGGGCAAGCACAGAGACAACATCCAGCATTGAACCAACTCCAATaGATTAGTTCTGGTTGCCTA	+
Preference number: 3 (lower is better) Translates to: AKTKLKSKGGQAQRQHPALNQLQ*ISSGCL Trigger: TAGGCAACCAGAACTAATCAATTGGAGTTGGTTCAA...TGCTGGATGTTGTCTCTGTGCTTGCCCTCCCTTGCTCTTCAGTTTTGTTTTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR-3UTR CAA 90 bp	AGTCAGGACAGGAACTTAAAGGCAGGAACTGAGGCAGAAACCACTGGCTTCTCTGATAATTTGTGGTTCTaGCAGAATACCCTGAAAACT	+
Preference number: 3 (lower is better) Translates to: SQDRNLKAGTEAETTGFSDNLWF*QNTLKT Trigger: AGTTTTCAGGGTATTCTGCAAGAACCACAAATTATC...AGAGAAGCCAGTGGTTTCTGCCTCAGTTCCTGCCTTTAAGTTCCTGTCCTGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR TCA 72 bp	CCTCAAACTTCCTTCTTATTTCCTATCCCAGAGTGTTaGGCATACAATCTGGGTGGTGATCAACAGCTACTG	+
Preference number: 3 (lower is better) Translates to: PQTSFLFPIPEC*AYNLGGDQQLL Trigger: CAGTAGCTGTTGATCACCACCCAGATTGTATGCTCAACACTCTGGGATAGGAAATAAGAAGGAAGTTTGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR TCA 72 bp	TTTGAAGAATATCTTGTTCAGGGATGCCTGGTAGGTTaGGGTGTCTGGTCTTGTAGGTTTCTGACAGTAGCA	+
Preference number: 3 (lower is better) Translates to: FEEYLVQGCLVG*GVWSCRFLTVA Trigger: TGCTACTGTCAGAAACCTACAAGACCAGACACCTCAACCTACCAGGCATCCCTGAACAAGATATTCTTCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR-3UTR CAA 90 bp	CTAAAATGTGCCTGTAGTGTAAACAGAAAGAGTAGGTATAGGTATATTCCACTTCATGGCGCAGGTTGGTaGGCTTTGGTTTGGGTTTGG	+
Preference number: 3 (lower is better) Translates to: LKCACSVNRKSRYRYIPLHGAGW*ALVWVW Trigger: CCAAACCCAAACCAAAGCCAACCAACCTGCGCCATG...AAGTGGAATATACCTATACCTACTCTTTCTGTTTACACTACAGGCACATTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224760.2
3UTR GCA 72 bp	CATCCAGCATCTGAGCAACCTGCAGTGATGCACATGTaGATTACAACAAAGCCTGTTCTTTTGTTACTTAGT	+
Preference number: 3 (lower is better) Translates to: HPASEQPAVMHM*ITTKPVLLLLS Trigger: ACTAAGTAACAAAAGAACAGGCTTTGTTGTAATGCACATGTGCATCACTGCAGGTTGCTCAGATGCTGGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR CCA 72 bp	ATTCACTTTGCATGCAACTCTCTCAGACTAAGTCTGTaGACTCTGCAAGCCATACCTGAACTTTTTAAAGCC	+
Preference number: 3 (lower is better) Translates to: IHFACNSLRLSL*TLQAIPELFKA Trigger: GGCTTTAAAAAGTTCAGGTATGGCTTGCAGAGTCCACAGACTTAGTCTGAGAGAGTTGCATGCAAAGTGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR TCA 72 bp	AAAATAATCTGTGAGGCGTTTGTAAATTGCCCCTCGTaGGCTGCAGTGCTCATGAAAGATAATTTGTGGTTC	+
Preference number: 3 (lower is better) Translates to: KIICEAFVNCPS*AAVLMKDNLWF Trigger: GAACCACAAATTATCTTTCATGAGCACTGCAGCTCACGAGGGGCAATTTACAAACGCCTCACAGATTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR TCA 72 bp	GTTACGCTACTTTTAATGGAAGCATGCCATTTCAGATaGCTTTCTCTGAAGCAACACTACACGTGCCTTTTG	+
Preference number: 3 (lower is better) Translates to: VTLLLMEACHFR*LSLKQHYTCLL Trigger: CAAAAGGCACGTGTAGTGTTGCTTCAGAGAAAGTCATCTGAAATGGCATGCTTCCATTAAAAGTAGCGTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR CCA 72 bp	CTTAAAGACTACCTATTAAGCCAGAGGCCTTTTGCGTaGGTTATCATCTGTACATCGACATCTAATAGGATC	+
Preference number: 3 (lower is better) Translates to: LKDYLLSQRPFA*VIICTSTSNRI Trigger: GATCCTATTAGATGTCGATGTACAGATGATAACCCACGCAAAAGGCCTCTGGCTTAATAGGTAGTCTTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR-3UTR CAA 90 bp	GCGTCGCTCTTCTTTTTGTTCCTACACATAGACTTCTTGTCATATCTTCTCAGTGTCATATCTTCTCAGTaGCAAGATATGAGTGTGTCT	+
Preference number: 3 (lower is better) Translates to: ASLFFLFLHIDFLSYLLSVISSQ*QDMSVS Trigger: AGACACACTCATATCTTGCAACTGAGAAGATATGAC...ACTGAGAAGATATGACAAGAAGTCTATGTGTAGGAACAAAAAGAAGAGCGACGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR-3UTR CAA 90 bp	TATAATCTGAGTCTTGTGGCCAGCTATGAAATTCCCAACCAACAGACATTTCCACTACACATAGACTTCTaGTCATATCTTCTCAGTTGC	+
Preference number: 3 (lower is better) Translates to: YNLSLVASYEIPNQQTFPLHIDF*SYLLSC Trigger: GCAACTGAGAAGATATGACAAGAAGTCTATGTGTAG...TGGAAATGTCTGTTGGTTGGGAATTTCATAGCTGGCCACAAGACTCAGATTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR TCA 72 bp	TGCTACATCCTTAGAATAGAAACTCAGTCACACAGTTaGATTGAGCTACCTTGGCACAAAAGAGAGATGTCA	+
Preference number: 3 (lower is better) Translates to: CYILRIETQSHS*IELPWHKREMS Trigger: TGACATCTCTCTTTTGTGCCAAGGTAGCTCAATTCAACTGTGTGACTGAGTTTCTATTCTAAGGATGTAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR GCA 72 bp	GGTAATAGGGGATTAGTTTGTGTTATGCATGCTAACTaGATGCTTCTGCAACTGGATTTATCAGTCACACAA	+
Preference number: 3 (lower is better) Translates to: GNRGLVCVMHAN*MLLQLDLSVTQ Trigger: TTGTGTGACTGATAAATCCAGTTGCAGAAGCATGCAGTTAGCATGCATAACACAAACTAATCCCCTATTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR CCA 72 bp	TTTGTGTTATGCATGCTAACTGCATGCTTCTGCAACTaGATTTATCAGTCACACAATGAACTGTGTGTGACT	+
Preference number: 3 (lower is better) Translates to: FVLCMLTACFCN*IYQSHNELCVT Trigger: AGTCACACACAGTTCATTGTGTGACTGATAAATCCAGTTGCAGAAGCATGCAGTTAGCATGCATAACACAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR CCA 72 bp	CACAACTTTTATGTGAATTTCTACTGGATCATTTACTaGTGTGATAACTTAGGACTTTTGCTTTCTAGGCTC	+
Preference number: 3 (lower is better) Translates to: HNFYVNFYWIIY*CDNLGLLLSRL Trigger: GAGCCTAGAAAGCAAAAGTCCTAAGTTATCACACCAGTAAATGATCCAGTAGAAATTCACATAAAAGTTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
CDS-3UTR GCA 90 bp	GGATGCAGAGACACAGCCACCATTCAGCCTAAGCAAAAGCCATCCCTGCTGGGAGACTTCTGGGCATCTTaGGGGGCAGAACCAGGCTGC	+
Preference number: 4 (lower is better) Translates to: GCRDTATIQPKQKPSLLGDFWAS*GAEPGC Trigger: GCAGCCTGGTTCTGCCCCGCAAGATGCCCAGAAGTC...TCCCAGCAGGGATGGCTTTTGCTTAGGCTGAATGGTGGCTGTGTCTCTGCATCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
CDS-3UTR CCA 90 bp	GGATGCAGAGACACAGCCACCATTCAGCCTAAGCAAAAGCCATCCCTGCTGGGACAGGCAGCCTGCAGATaGCACCATCTGTTTCTCCCC	+
Preference number: 4 (lower is better) Translates to: GCRDTATIQPKQKPSLLGQAACR*HHLFLP Trigger: GGGGAGAAACAGATGGTGCCATCTGCAGGCTGCCTG...TCCCAGCAGGGATGGCTTTTGCTTAGGCTGAATGGTGGCTGTGTCTCTGCATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR CAA 72 bp	CCAGTGATGACCACAGTAGCCACAGCATGGCGCAGGTaGGTTGGCTTTGGTTTGGGTTTGGCCTCACACTCC	+
Preference number: 4 (lower is better) Translates to: PVMTTVATAWRR*VGFGLGLASHS Trigger: GGAGTGTGAGGCCAAACCCAAACCAAAGCCAACCAACCTGCGCCATGCTGTGGCTACTGTGGTCATCACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224760.2
CDS-3UTR TCA 90 bp	GAGCTACCTTGGCACAAAAGAGAGATGTCAGGGCAAATGACAGCCCATGCAGCTACCTTTGACAGCCCCTaGCCACTGCAGTCCACGGAG	+
Preference number: 4 (lower is better) Translates to: ELPWHKREMSGQMTAHAATFDSP*PLQSTE Trigger: CTCCGTGGACTGCAGTGGTCAGGGGCTGTCAAAGGT...AGCTGCATGGGCTGTCATTTGCCCTGACATCTCTCTTTTGTGCCAAGGTAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
CDS-3UTR TCA 90 bp	GGTGATCAACAGCTACTGGCTCCCACCCGACACGGCTGCATTTCATTAGTGGGTGGTTGGTACAGTTCGTaGGGAATGGAGAGGAGAGCC	+
Preference number: 4 (lower is better) Translates to: GDQQLLAPTRHGCISLVGGWYSS*GMERRA Trigger: GGCTCTCCTCTCCATTCCTCACGAACTGTACCAACC...ACCCACTAATGAAATGCAGCCGTGTCGGGTGGGAGCCAGTAGCTGTTGATCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
CDS-3UTR GCA 90 bp	GCACAAAAGAGAGATGTCAGGGCAAATGACAGCCCATGCAGCTGTGGGCCTTTGATTTCATGGGGCAGCTaGCCACTCCTGGGAGCAGGA	+
Preference number: 4 (lower is better) Translates to: AQKRDVRANDSPCSCGPLISWGS*PLLGAG Trigger: TCCTGCTCCCAGGAGTGGGCAGCTGCCCCATGAAAT...CAAAGGCCCACAGCTGCATGGGCTGTCATTTGCCCTGACATCTCTCTTTTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
CDS-3UTR CCA 90 bp	GGATGCAGAGACACAGCCACCATTCAGCCTAAGCAAAAGCCATCCCTGCTGGGAGGCACAAACATTTCATaGGGCAGCTGCCCACTCCTG	+
Preference number: 4 (lower is better) Translates to: GCRDTATIQPKQKPSLLGGTNIS*GSCPLL Trigger: CAGGAGTGGGCAGCTGCCCCATGAAATGTTTGTGCC...TCCCAGCAGGGATGGCTTTTGCTTAGGCTGAATGGTGGCTGTGTCTCTGCATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR CAA 72 bp	ACAGCATGGCGCAGGTTGGTTGGCTTTGGTTTGGGTTaGGCCTCACACTCCAAGGGATCTTGCTGTCCTGAG	+
Preference number: 4 (lower is better) Translates to: TAWRRLVGFGLG*ASHSKGSCCPE Trigger: CTCAGGACAGCAAGATCCCTTGGAGTGTGAGGCCAAACCCAAACCAAAGCCAACCAACCTGCGCCATGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224760.2
3UTR CAA 72 bp	GTAGCCACAGCATGGCGCAGGTTGGTTGGCTTTGGTTaGGGTTTGGCCTCACACTCCAAGGGATCTTGCTGT	+
Preference number: 4 (lower is better) Translates to: VATAWRRLVGFG*GLASHSKGSCC Trigger: ACAGCAAGATCCCTTGGAGTGTGAGGCCAAACCCAAACCAAAGCCAACCAACCTGCGCCATGCTGTGGCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224760.2
CDS-3UTR TCA 90 bp	CATCCCTGCTGGGAGAGTTCTAGGATAAGGTTCCCATTGCTTGGTGGATATGGTACCTTTGACAGCCCCTaGCCACTGCAGTCCACGGAG	+
Preference number: 4 (lower is better) Translates to: HPCWESSRIRFPLLGGYGTFDSP*PLQSTE Trigger: CTCCGTGGACTGCAGTGGTCAGGGGCTGTCAAAGGT...ACCATATCCACCAAGCAATGGGAACCTTATCCTAGAACTCTCCCAGCAGGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
CDS-3UTR TCA 90 bp	AGTGGCTGTGAACTCAGGTCTCTGCAGGAGCAGAAATCACCTGCCTGTCACCACGAGGGTGCCAAATCCTaGGAAGGTAGAGAACAGGGT	+
Preference number: 4 (lower is better) Translates to: SGCELRSLQEQKSPACHHEGAKS*EGREQG Trigger: ACCCTGTTCTCTACCTTCTCAGGATTTGGCACCCTC...GTGGTGACAGGCAGGTGATTTCTGCTCCTGCAGAGACCTGAGTTCACAGCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
CDS-3UTR GCA 90 bp	AGTCAGGACAGGAACTTAAAGGCAGGAACTGAGGCAGAAACCACTGGCTTCTCTAGGAGAGCCTTTCCCTaGCAGGGTTCAGGCAGCCTG	+
Preference number: 4 (lower is better) Translates to: SQDRNLKAGTEAETTGFSRRAFP*QGSGSL Trigger: CAGGCTGCCTGAACCCTGGCAGGGAAAGGCTCTCCT...AGAGAAGCCAGTGGTTTCTGCCTCAGTTCCTGCCTTTAAGTTCCTGTCCTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
CDS-3UTR TCA 90 bp	CATCCCTGCTGGGAGAGTTCTAGGATAAGGTTCCCATTGCTTGGTGGATATGGTAAAGATCTAGCTCCCTaGGCCCAGGAAGGGCATGGG	+
Preference number: 4 (lower is better) Translates to: HPCWESSRIRFPLLGGYGKDLAP*AQEGHG Trigger: CCCATGCCCTTCCTGGGCTCAGGGAGCTAGATCTTT...ACCATATCCACCAAGCAATGGGAACCTTATCCTAGAACTCTCCCAGCAGGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
CDS-3UTR TCA 90 bp	GGTGATCAACAGCTACTGGCTCCCACCCGACACGGCTGCATTTCATTAGTGGGTTCTGTTTCTCCCCCTTaGAAGGTGAATCTCTCCAGC	+
Preference number: 4 (lower is better) Translates to: GDQQLLAPTRHGCISLVGSVSPP*KVNLSS Trigger: GCTGGAGAGATTCACCTTTCAAGGGGGAGAAACAGA...ACCCACTAATGAAATGCAGCCGTGTCGGGTGGGAGCCAGTAGCTGTTGATCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
CDS-3UTR TCA 90 bp	TCCATGCCCTCTGTGCACTGCAGATGTAGATGTGGATGCAGAGACACAGCCACCCAGCCGCCAACATCATaGGACATACGATCCCACATA	+
Preference number: 4 (lower is better) Translates to: SMPSVHCRCRCGCRDTATQPPTS*DIRSHI Trigger: TATGTGGGATCGTATGTCTCATGATGTTGGCGGCTG...GGTGGCTGTGTCTCTGCATCCACATCTACATCTGCAGTGCACAGAGGGCATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
CDS-3UTR GCA 90 bp	GCACAAAAGAGAGATGTCAGGGCAAATGACAGCCCATGCAGCTGTGGGCCTTTGGGGCATGGGCAAAGCTaGTTTCTATGGAAAGCAGGG	+
Preference number: 4 (lower is better) Translates to: AQKRDVRANDSPCSCGPLGHGQS*FLWKAG Trigger: CCCTGCTTTCCATAGAAAGCAGCTTTGCCCATGCCC...CAAAGGCCCACAGCTGCATGGGCTGTCATTTGCCCTGACATCTCTCTTTTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
CDS-3UTR GCA 90 bp	CTGTGTTCCTTCACATCAAAACCTTGCCCAGGCTCCGGGCCTGAGTCCCATTATGGGCATGGGCAAAGCTaGTTTCTATGGAAAGCAGGG	+
Preference number: 4 (lower is better) Translates to: LCSFTSKPCPGSGPESHYGHGQS*FLWKAG Trigger: CCCTGCTTTCCATAGAAAGCAGCTTTGCCCATGCCC...ATAATGGGACTCAGGCCCGGAGCCTGGGCAAGGTTTTGATGTGAAGGAACACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
CDS-3UTR GCA 90 bp	TACAAATCCATGCCCTCTGTGCACTGCAGATGTAGATGTGGATGCAGAGACACAGACTTCTGGGCATCTTaGGGGGCAGAACCAGGCTGC	+
Preference number: 4 (lower is better) Translates to: YKSMPSVHCRCRCGCRDTDFWAS*GAEPGC Trigger: GCAGCCTGGTTCTGCCCCGCAAGATGCCCAGAAGTC...TGTGTCTCTGCATCCACATCTACATCTGCAGTGCACAGAGGGCATGGATTTGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
CDS-3UTR CCA 90 bp	CATCCCTGCTGGGAGAGTTCTAGGATAAGGTTCCCATTGCTTGGTGGATATGGTGCAGGAGACCCACACTaGAGACCAGCAGCAGAGTAC	+
Preference number: 4 (lower is better) Translates to: HPCWESSRIRFPLLGGYGAGDPH*RPAAEY Trigger: GTACTCTGCTGCTGGTCTCCAGTGTGGGTCTCCTGC...ACCATATCCACCAAGCAATGGGAACCTTATCCTAGAACTCTCCCAGCAGGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
CDS-3UTR TCA 90 bp	GCATGGCGCAGGTTGGTTGGCTTTGGTTTGGGTTTGGCCTCACACTCCAAGGGAAGCAGTGATACAGATTaGAATGCAAGAGCAGGAAGC	+
Preference number: 4 (lower is better) Translates to: AWRRLVGFGLGLASHSKGSSDTD*NARAGS Trigger: GCTTCCTGCTCTTGCATTTCAATCTGTATCACTGCT...TCCCTTGGAGTGTGAGGCCAAACCCAAACCAAAGCCAACCAACCTGCGCCATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224760.2
CDS-3UTR TCA 90 bp	GCAAAAACAAAACTGAAGAGCAAGGGAGGGCAAGCACAGAGACAACATCCAGCACTCAGACTTCCTGGCTaGTGCCAAGGGTCTCCCTTG	+
Preference number: 4 (lower is better) Translates to: AKTKLKSKGGQAQRQHPALRLPG*CQGSPL Trigger: CAAGGGAGACCCTTGGCATCAGCCAGGAAGTCTGAG...TGCTGGATGTTGTCTCTGTGCTTGCCCTCCCTTGCTCTTCAGTTTTGTTTTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
CDS-3UTR CCA 90 bp	CCCTCAAACTTCCTTCTTATTTCCTATCCCAGAGTGTTGAGCATACAATCTGGGGCAGCTGCCCACTCCTaGGAGCAGGAGACCCACACT	+
Preference number: 4 (lower is better) Translates to: PSNFLLISYPRVLSIQSGAAAHS*EQETHT Trigger: AGTGTGGGTCTCCTGCTCCCAGGAGTGGGCAGCTGC...CCCAGATTGTATGCTCAACACTCTGGGATAGGAAATAAGAAGGAAGTTTGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
CDS-3UTR CCA 90 bp	GAGCTACCTTGGCACAAAAGAGAGATGTCAGGGCAAATGACAGCCCATGCAGCTGCCTCACCTTGGGCATaGCCTCTAGAAGTTCACGAT	+
Preference number: 4 (lower is better) Translates to: ELPWHKREMSGQMTAHAAASPWA*PLEVHD Trigger: ATCGTGAACTTCTAGAGGCCATGCCCAAGGTGAGGC...AGCTGCATGGGCTGTCATTTGCCCTGACATCTCTCTTTTGTGCCAAGGTAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
CDS-3UTR CCA 90 bp	GCACAAAAGAGAGATGTCAGGGCAAATGACAGCCCATGCAGCTGTGGGCCTTTGCAGGTTGGTTGGCTTTaGTTTGGGTTTGGCCTCACA	+
Preference number: 4 (lower is better) Translates to: AQKRDVRANDSPCSCGPLQVGWL*FGFGLT Trigger: TGTGAGGCCAAACCCAAACCAAAGCCAACCAACCTG...CAAAGGCCCACAGCTGCATGGGCTGTCATTTGCCCTGACATCTCTCTTTTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
CDS-3UTR CCA 90 bp	GGATGCAGAGACACAGCCACCATTCAGCCTAAGCAAAAGCCATCCCTGCTGGGAGAGTTTGATGATGGGTaGCACAAACATTTCATGGGG	+
Preference number: 4 (lower is better) Translates to: GCRDTATIQPKQKPSLLGEFDDG*HKHFMG Trigger: CCCCATGAAATGTTTGTGCCACCCATCATCAAACTC...TCCCAGCAGGGATGGCTTTTGCTTAGGCTGAATGGTGGCTGTGTCTCTGCATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
CDS-3UTR CCA 90 bp	CATCCCTGCTGGGAGAGTTCTAGGATAAGGTTCCCATTGCTTGGTGGATATGGTACAGTAGCCACAGCATaGCGCAGGTTGGTTGGCTTT	+
Preference number: 4 (lower is better) Translates to: HPCWESSRIRFPLLGGYGTVATA*RRLVGF Trigger: AAAGCCAACCAACCTGCGCCATGCTGTGGCTACTGT...ACCATATCCACCAAGCAATGGGAACCTTATCCTAGAACTCTCCCAGCAGGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
CDS-3UTR CCA 90 bp	CATCCCTGCTGGGAGAGTTCTAGGATAAGGTTCCCATTGCTTGGTGGATATGGTTCTTCTCAGACTTCCTaGCTGATGCCAAGGGTCTCC	+
Preference number: 4 (lower is better) Translates to: HPCWESSRIRFPLLGGYGSSQTS*LMPRVS Trigger: GGAGACCCTTGGCATCAGCCAGGAAGTCTGAGAAGA...ACCATATCCACCAAGCAATGGGAACCTTATCCTAGAACTCTCCCAGCAGGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR CAA 72 bp	ACTCTCAGCATCACATGGCTGACATGCCCTTCTCCTTaGAGCTTCACTACAGAGAGCTGCAGTGGCTGTGAA	+
Preference number: 4 (lower is better) Translates to: TLSITWLTCPSP*SFTTESCSGCE Trigger: TTCACAGCCACTGCAGCTCTCTGTAGTGAAGCTCAAAGGAGAAGGGCATGTCAGCCATGTGATGCTGAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
CDS-3UTR GCA 90 bp	AAAATTCACTTTGCATGCAACTCTCTCAGACTAAGTCTGTGGACTCTGCAAGCCATTTCATGGGGCAGCTaGCCACTCCTGGGAGCAGGA	+
Preference number: 4 (lower is better) Translates to: KIHFACNSLRLSLWTLQAISWGS*PLLGAG Trigger: TCCTGCTCCCAGGAGTGGGCAGCTGCCCCATGAAAT...GGCTTGCAGAGTCCACAGACTTAGTCTGAGAGAGTTGCATGCAAAGTGAATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
CDS-3UTR GCA 90 bp	GCAAAAACAAAACTGAAGAGCAAGGGAGGGCAAGCACAGAGACAACATCCAGCAAGGGTTCAGGCAGCCTaGAGATGGCACCATCTGTTT	+
Preference number: 4 (lower is better) Translates to: AKTKLKSKGGQAQRQHPARVQAA*RWHHLF Trigger: AAACAGATGGTGCCATCTGCAGGCTGCCTGAACCCT...TGCTGGATGTTGTCTCTGTGCTTGCCCTCCCTTGCTCTTCAGTTTTGTTTTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
CDS-3UTR GCA 90 bp	GAGCTACCTTGGCACAAAAGAGAGATGTCAGGGCAAATGACAGCCCATGCAGCTCTGGGCTGTGATGGCTaGATAGGTACATCCATAGAT	+
Preference number: 4 (lower is better) Translates to: ELPWHKREMSGQMTAHAALGCDG*IGTSID Trigger: ATCTATGGATGTACCTATGCAGCCATCACAGCCCAG...AGCTGCATGGGCTGTCATTTGCCCTGACATCTCTCTTTTGTGCCAAGGTAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
CDS-3UTR CCA 90 bp	TATAATCTGAGTCTTGTGGCCAGCTATGAAATTCCCAACCAACAGACATTTCCAGCAGCTGCCCACTCCTaGGAGCAGGAGACCCACACT	+
Preference number: 4 (lower is better) Translates to: YNLSLVASYEIPNQQTFPAAAHS*EQETHT Trigger: AGTGTGGGTCTCCTGCTCCCAGGAGTGGGCAGCTGC...TGGAAATGTCTGTTGGTTGGGAATTTCATAGCTGGCCACAAGACTCAGATTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR CAA 72 bp	TCTTCAGTAGTTCTCAGTGAACTTCAGCAATGGGGTTaGACTTCCAGGAGCCTTCTGCAGGATGCTCAGGTG	+
Preference number: 4 (lower is better) Translates to: SSVVLSELQQWG*TSRSLLQDAQV Trigger: CACCTGAGCATCCTGCAGAAGGCTCCTGGAAGTCAAACCCCATTGCTGAAGTTCACTGAGAACTACTGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
CDS-3UTR CCA 90 bp	GCACAAAAGAGAGATGTCAGGGCAAATGACAGCCCATGCAGCTGTGGGCCTTTGCAAAGCTGCTTTCTATaGAAAGCAGGGAATTTTGGG	+
Preference number: 4 (lower is better) Translates to: AQKRDVRANDSPCSCGPLQSCFL*KAGNFG Trigger: CCCAAAATTCCCTGCTTTCCATAGAAAGCAGCTTTG...CAAAGGCCCACAGCTGCATGGGCTGTCATTTGCCCTGACATCTCTCTTTTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
CDS-3UTR CCA 90 bp	CATCCCTGCTGGGAGAGTTCTAGGATAAGGTTCCCATTGCTTGGTGGATATGGTAGTTCACGATCCAGATaGAGAAGATGGTTCTGCTGC	+
Preference number: 4 (lower is better) Translates to: HPCWESSRIRFPLLGGYGSSRSR*RRWFCC Trigger: GCAGCAGAACCATCTTCTCCATCTGGATCGTGAACT...ACCATATCCACCAAGCAATGGGAACCTTATCCTAGAACTCTCCCAGCAGGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
CDS-3UTR CCA 90 bp	GCAGAATCCAGCTTAATCCAGAAACAGGTACCTAAAAGAGATGGCGTCGCTCTTGCCTCACCTTGGGCATaGCCTCTAGAAGTTCACGAT	+
Preference number: 4 (lower is better) Translates to: AESSLIQKQVPKRDGVALASPWA*PLEVHD Trigger: ATCGTGAACTTCTAGAGGCCATGCCCAAGGTGAGGC...AAGAGCGACGCCATCTCTTTTAGGTACCTGTTTCTGGATTAAGCTGGATTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
CDS-3UTR CCA 90 bp	GCAAAAACAAAACTGAAGAGCAAGGGAGGGCAAGCACAGAGACAACATCCAGCAACAGTTCGTGAGGAATaGAGAGGAGAGCCTTTCCCT	+
Preference number: 4 (lower is better) Translates to: AKTKLKSKGGQAQRQHPATVREE*RGEPFP Trigger: AGGGAAAGGCTCTCCTCTCCATTCCTCACGAACTGT...TGCTGGATGTTGTCTCTGTGCTTGCCCTCCCTTGCTCTTCAGTTTTGTTTTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
3UTR CAA 72 bp	CATCCCTGCTGGGAGAGTTCTAGGATAAGGTTCCCATaGCTTGGTGGATATGGTCTCTTGATGATATCTGCC	+
Preference number: 4 (lower is better) Translates to: HPCWESSRIRFP*LGGYGLLMISA Trigger: GGCAGATATCATCAAGAGACCATATCCACCAAGCAATGGGAACCTTATCCTAGAACTCTCCCAGCAGGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR CAA 72 bp	ATCATCTGTACATCGACATCTAATAGGATCAGGGTGTaGACAGGCGAGGGTTTGCGCCACGTTCATGGTTTG	+
Preference number: 4 (lower is better) Translates to: IICTSTSNRIRV*TGEGLRHVHGL Trigger: CAAACCATGAACGTGGCGCAAACCCTCGCCTGTCAACACCCTGATCCTATTAGATGTCGATGTACAGATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
CDS-3UTR TCA 90 bp	CATCCCTGCTGGGAGAGTTCTAGGATAAGGTTCCCATTGCTTGGTGGATATGGTAGCAGTGATACAGATTaGAATGCAAGAGCAGGAAGC	+
Preference number: 4 (lower is better) Translates to: HPCWESSRIRFPLLGGYGSSDTD*NARAGS Trigger: GCTTCCTGCTCTTGCATTTCAATCTGTATCACTGCT...ACCATATCCACCAAGCAATGGGAACCTTATCCTAGAACTCTCCCAGCAGGGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
CDS-3UTR TCA 90 bp	CATCCCTGCTGGGAGAGTTCTAGGATAAGGTTCCCATTGCTTGGTGGATATGGTCAAATCCTTGAAAGGTaGATCTCTCCAGCCAGAGTT	+
Preference number: 4 (lower is better) Translates to: HPCWESSRIRFPLLGGYGQILER*ISPARV Trigger: AACTCTGGCTGGAGAGATTCACCTTTCAAGGATTTG...ACCATATCCACCAAGCAATGGGAACCTTATCCTAGAACTCTCCCAGCAGGGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224760.2
CDS-3UTR CCA 90 bp	TTTCAGATGACTTTCTCTGAAGCAACACTACACGTGCCTTTTGCCCTGAGCGCCGAGTTTGATGATGGGTaGCACAAACATTTCATGGGG	+
Preference number: 4 (lower is better) Translates to: FQMTFSEATLHVPFALSAEFDDG*HKHFMG Trigger: CCCCATGAAATGTTTGTGCCACCCATCATCAAACTC...GGCGCTCAGGGCAAAAGGCACGTGTAGTGTTGCTTCAGAGAAAGTCATCTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
CDS-3UTR TCA 90 bp	AAAATTCACTTTGCATGCAACTCTCTCAGACTAAGTCTGTGGACTCTGCAAGCCCCTGAGCTATTCTCATaGGACTTCTGGGCATCTTGC	+
Preference number: 4 (lower is better) Translates to: KIHFACNSLRLSLWTLQAPELFS*DFWASC Trigger: GCAAGATGCCCAGAAGTCTCATGAGAATAGCTCAGG...GGCTTGCAGAGTCCACAGACTTAGTCTGAGAGAGTTGCATGCAAAGTGAATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
CDS-3UTR CCA 90 bp	GCAGAATCCAGCTTAATCCAGAAACAGGTACCTAAAAGAGATGGCGTCGCTCTTAGTTCACGATCCAGATaGAGAAGATGGTTCTGCTGC	+
Preference number: 4 (lower is better) Translates to: AESSLIQKQVPKRDGVALSSRSR*RRWFCC Trigger: GCAGCAGAACCATCTTCTCCATCTGGATCGTGAACT...AAGAGCGACGCCATCTCTTTTAGGTACCTGTTTCTGGATTAAGCTGGATTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
CDS-3UTR CCA 90 bp	GCAGAATCCAGCTTAATCCAGAAACAGGTACCTAAAAGAGATGGCGTCGCTCTTTTCAGACCCAGTAAGTaGCAGTCACAAATCCAAGGG	+
Preference number: 4 (lower is better) Translates to: AESSLIQKQVPKRDGVALFRPSK*QSQIQG Trigger: CCCTTGGATTTGTGACTGCCACTTACTGGGTCTGAA...AAGAGCGACGCCATCTCTTTTAGGTACCTGTTTCTGGATTAAGCTGGATTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
CDS-3UTR CCA 90 bp	AAAGATAATTTGTGGTTCTTGCAGAATACCCTGAAAACTGGGTCTTTCATCTGCGCCAAGGGTCTCCCTTaGTACTGGGCTGTGATGGCT	+
Preference number: 4 (lower is better) Translates to: KDNLWFLQNTLKTGSFICAKGLP*YWAVMA Trigger: AGCCATCACAGCCCAGTACCAAGGGAGACCCTTGGC...GCAGATGAAAGACCCAGTTTTCAGGGTATTCTGCAAGAACCACAAATTATCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
CDS-3UTR TCA 90 bp	GCGTCGCTCTTCTTTTTGTTCCTACACATAGACTTCTTGTCATATCTTCTCAGTCTCCCCCTTGAAAGGTaGATCTCTCCAGCCAGAGTT	+
Preference number: 4 (lower is better) Translates to: ASLFFLFLHIDFLSYLLSLPLER*ISPARV Trigger: AACTCTGGCTGGAGAGATTCACCTTTCAAGGGGGAG...ACTGAGAAGATATGACAAGAAGTCTATGTGTAGGAACAAAAAGAAGAGCGACGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
CDS-3UTR CCA 90 bp	CTAAAATGTGCCTGTAGTGTAAACAGAAAGAGTAGGTATAGGTATATTCCACTTGCAGGAGACCCACACTaGAGACCAGCAGCAGAGTAC	+
Preference number: 4 (lower is better) Translates to: LKCACSVNRKSRYRYIPLAGDPH*RPAAEY Trigger: GTACTCTGCTGCTGGTCTCCAGTGTGGGTCTCCTGC...AAGTGGAATATACCTATACCTACTCTTTCTGTTTACACTACAGGCACATTTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
CDS-3UTR CCA 90 bp	TATAATCTGAGTCTTGTGGCCAGCTATGAAATTCCCAACCAACAGACATTTCCACAAAGCTGCTTTCTATaGAAAGCAGGGAATTTTGGG	+
Preference number: 4 (lower is better) Translates to: YNLSLVASYEIPNQQTFPQSCFL*KAGNFG Trigger: CCCAAAATTCCCTGCTTTCCATAGAAAGCAGCTTTG...TGGAAATGTCTGTTGGTTGGGAATTTCATAGCTGGCCACAAGACTCAGATTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR CAA 72 bp	AGGATAAGGTTCCCATTGCTTGGTGGATATGGTCTCTaGATGATATCTGCCCTGTATTCTAGTTTACTATTC	+
Preference number: 4 (lower is better) Translates to: RIRFPLLGGYGL*MISALYSSLLF Trigger: GAATAGTAAACTAGAATACAGGGCAGATATCATCAAGAGACCATATCCACCAAGCAATGGGAACCTTATCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
3UTR CAA 72 bp	GTTCCTACACATAGACTTCTTGTCATATCTTCTCAGTaGCAAGATATGAGTGTGTCTATTATATCTATGGTA	+
Preference number: 4 (lower is better) Translates to: VPTHRLLVISSQ*QDMSVSIISMV Trigger: TACCATAGATATAATAGACACACTCATATCTTGCAACTGAGAAGATATGACAAGAAGTCTATGTGTAGGAAC 35% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
CDS CCA 90 bp	ATTTCATGGGGCAGCTGCCCACTCCTGGGAGCAGGAGACCCACACTaGAGACCAGCAGCAGAGTACCCTTCACAGAGTGGGACTGAGTAC	+
Preference number: 5 (lower is better) Translates to: ISWGSCPLLGAGDPH*RPAAEYPSQSGTEY Trigger: GTACTCAGTCCCACTCTGTGAAGGGTACTCTGCTGCTGGTCTCCAGTGTGGGTCTCCTGCTCCCAGGAGTGGGCAGCTGCCCCATGAAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224708.2
CDS CCA 90 bp	CACTGCAGTCCACGGAGTTTGATGATGGGTGGCACAAACATTTCATaGGGCAGCTGCCCACTCCTGGGAGCAGGAGACCCACACTGGAGA	+
Preference number: 5 (lower is better) Translates to: HCSPRSLMMGGTNIS*GSCPLLGAGDPHWR Trigger: TCTCCAGTGTGGGTCTCCTGCTCCCAGGAGTGGGCAGCTGCCCCATGAAATGTTTGTGCCACCCATCATCAAACTCCGTGGACTGCAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055662.4 ENSMUST00000224708.2 ENSMUST00000224760.2
CDS-3UTR CAA 90 bp	TCCATGCCCTCTGTGCACTGCAGATGTAGATGTGGATGCAGAGACACAGCCACCAATCACGGGGGACCTTaGACAGCCCCTGACCACTGC	+
Preference number: 5 (lower is better) Translates to: SMPSVHCRCRCGCRDTATNHGGP*TAPDHC Trigger: GCAGTGGTCAGGGGCTGTCAAAGGTCCCCCGTGATT...GGTGGCTGTGTCTCTGCATCCACATCTACATCTGCAGTGCACAGAGGGCATGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
CDS TCA 90 bp	GCGGGGCAGAACCAGGCTGCTGGACTAGTGAGGGTGCCAAATCCTTaGAAGGTGAATCTCTCCAGCCAGAGTTTCAGACCCAGTAAGTGG	+
Preference number: 5 (lower is better) Translates to: AGQNQAAGLVRVPNP*KVNLSSQSFRPSKW Trigger: CCACTTACTGGGTCTGAAACTCTGGCTGGAGAGATTCACCTTTCAAGGATTTGGCACCCTCACTAGTCCAGCAGCCTGGTTCTGCCCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224760.2
CDS-3UTR CAA 90 bp	GGATGCAGAGACACAGCCACCATTCAGCCTAAGCAAAAGCCATCCCTGCTGGGAGCAGGTTGGTTGGCTTaGGTTTGGGTTTGGCCTCAC	+
Preference number: 5 (lower is better) Translates to: GCRDTATIQPKQKPSLLGAGWLA*VWVWPH Trigger: GTGAGGCCAAACCCAAACCAAAGCCAACCAACCTGC...TCCCAGCAGGGATGGCTTTTGCTTAGGCTGAATGGTGGCTGTGTCTCTGCATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
CDS TCA 90 bp	CAGGCAGCCTGCAGATGGCACCATCTGTTTCTCCCCCTTGAAAGGTaGATCTCTCCAGCCAGAGTTTCAGACCCAGTAAGTGGCAGTCAC	+
Preference number: 5 (lower is better) Translates to: QAACRWHHLFLPLER*ISPARVSDPVSGSH Trigger: GTGACTGCCACTTACTGGGTCTGAAACTCTGGCTGGAGAGATTCACCTTTCAAGGGGGAGAAACAGATGGTGCCATCTGCAGGCTGCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224708.2
CDS TCA 90 bp	CAGGGTTCAGGCAGCCTGCAGATGGCACCATCTGTTTCTCCCCCTTaGAAGGTGAATCTCTCCAGCCAGAGTTTCAGACCCAGTAAGTGG	+
Preference number: 5 (lower is better) Translates to: QGSGSLQMAPSVSPP*KVNLSSQSFRPSKW Trigger: CCACTTACTGGGTCTGAAACTCTGGCTGGAGAGATTCACCTTTCAAGGGGGAGAAACAGATGGTGCCATCTGCAGGCTGCCTGAACCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224708.2
CDS CCA 90 bp	AATCCTGAGAAGGTAGAGAACAGGGTTGGTACAGTTCGTGAGGAATaGAGAGGAGAGCCTTTCCCTGCCAGGGTTCAGGCAGCCTGCAGA	+
Preference number: 5 (lower is better) Translates to: NPEKVENRVGTVREE*RGEPFPARVQAACR Trigger: TCTGCAGGCTGCCTGAACCCTGGCAGGGAAAGGCTCTCCTCTCCATTCCTCACGAACTGTACCAACCCTGTTCTCTACCTTCTCAGGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224708.2
CDS TCA 90 bp	CTTTGGTTTGGGTTTGGCCTCACACTCCAAGGGATCTTGCTGTCCTaGGCTATTCTCATGAGACTTCTGGGCATCTTGCGGGGCAGAACC	+
Preference number: 5 (lower is better) Translates to: LWFGFGLTLQGILLS*AILMRLLGILRGRT Trigger: GGTTCTGCCCCGCAAGATGCCCAGAAGTCTCATGAGAATAGCTCAGGACAGCAAGATCCCTTGGAGTGTGAGGCCAAACCCAAACCAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224708.2
CDS-3UTR CAA 90 bp	CTGTGTTCCTTCACATCAAAACCTTGCCCAGGCTCCGGGCCTGAGTCCCATTATTGCAGTCCACGGAGTTaGATGATGGGTGGCACAAAC	+
Preference number: 5 (lower is better) Translates to: LCSFTSKPCPGSGPESHYCSPRS*MMGGTN Trigger: GTTTGTGCCACCCATCATCAAACTCCGTGGACTGCA...ATAATGGGACTCAGGCCCGGAGCCTGGGCAAGGTTTTGATGTGAAGGAACACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
CDS-3UTR CAA 90 bp	GGATGCAGAGACACAGCCACCATTCAGCCTAAGCAAAAGCCATCCCTGCTGGGAGAGGGTGCCAAATCCTaGAAAGGTGAATCTCTCCAG	+
Preference number: 5 (lower is better) Translates to: GCRDTATIQPKQKPSLLGEGAKS*KGESLQ Trigger: CTGGAGAGATTCACCTTTCAAGGATTTGGCACCCTC...TCCCAGCAGGGATGGCTTTTGCTTAGGCTGAATGGTGGCTGTGTCTCTGCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224760.2
CDS CCA 90 bp	ACCTTGGGCATGGCCTCTAGAAGTTCACGATCCAGATGGAGAAGATaGTTCTGCTGCACAGCAAACACAGTCAGGTTCTCCCAAGGCTTC	+
Preference number: 5 (lower is better) Translates to: TLGMASRSSRSRWRR*FCCTANTVRFSQGF Trigger: GAAGCCTTGGGAGAACCTGACTGTGTTTGCTGTGCAGCAGAACCATCTTCTCCATCTGGATCGTGAACTTCTAGAGGCCATGCCCAAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055662.4 ENSMUST00000224708.2 ENSMUST00000224760.2
CDS-3UTR CAA 90 bp	GAGCTACCTTGGCACAAAAGAGAGATGTCAGGGCAAATGACAGCCCATGCAGCTTGCAGTCCACGGAGTTaGATGATGGGTGGCACAAAC	+
Preference number: 5 (lower is better) Translates to: ELPWHKREMSGQMTAHAACSPRS*MMGGTN Trigger: GTTTGTGCCACCCATCATCAAACTCCGTGGACTGCA...AGCTGCATGGGCTGTCATTTGCCCTGACATCTCTCTTTTGTGCCAAGGTAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
CDS-3UTR CAA 90 bp	TTTCAGATGACTTTCTCTGAAGCAACACTACACGTGCCTTTTGCCCTGAGCGCCCATGGCGCAGGTTGGTaGGCTTTGGTTTGGGTTTGG	+
Preference number: 5 (lower is better) Translates to: FQMTFSEATLHVPFALSAHGAGW*ALVWVW Trigger: CCAAACCCAAACCAAAGCCAACCAACCTGCGCCATG...GGCGCTCAGGGCAAAAGGCACGTGTAGTGTTGCTTCAGAGAAAGTCATCTGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
CDS-3UTR CAA 90 bp	TCCATGCCCTCTGTGCACTGCAGATGTAGATGTGGATGCAGAGACACAGCCACCTCACAAATCCAAGGGTaGTCCTTAAGAAGTACCAGC	+
Preference number: 5 (lower is better) Translates to: SMPSVHCRCRCGCRDTATSQIQG*SLRSTS Trigger: GCTGGTACTTCTTAAGGACAACCCTTGGATTTGTGA...GGTGGCTGTGTCTCTGCATCCACATCTACATCTGCAGTGCACAGAGGGCATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
CDS-3UTR CAA 90 bp	GCAAAAACAAAACTGAAGAGCAAGGGAGGGCAAGCACAGAGACAACATCCAGCAACAGCATGGCGCAGGTaGGTTGGCTTTGGTTTGGGT	+
Preference number: 5 (lower is better) Translates to: AKTKLKSKGGQAQRQHPATAWRR*VGFGLG Trigger: ACCCAAACCAAAGCCAACCAACCTGCGCCATGCTGT...TGCTGGATGTTGTCTCTGTGCTTGCCCTCCCTTGCTCTTCAGTTTTGTTTTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
CDS CCA 90 bp	AGGCTGTTGGATGAAAGATCTAGCTCCCTGAGCCCAGGAAGGGCATaGGCAAAGCTGCTTTCTATGGAAAGCAGGGAATTTTGGGTTACA	+
Preference number: 5 (lower is better) Translates to: RLLDERSSSLSPGRA*AKLLSMESREFWVT Trigger: TGTAACCCAAAATTCCCTGCTTTCCATAGAAAGCAGCTTTGCCCATGCCCTTCCTGGGCTCAGGGAGCTAGATCTTTCATCCAACAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055662.4 ENSMUST00000224708.2 ENSMUST00000224760.2
CDS-3UTR CAA 90 bp	TTTCAGATGACTTTCTCTGAAGCAACACTACACGTGCCTTTTGCCCTGAGCGCCTCACAAATCCAAGGGTaGTCCTTAAGAAGTACCAGC	+
Preference number: 5 (lower is better) Translates to: FQMTFSEATLHVPFALSASQIQG*SLRSTS Trigger: GCTGGTACTTCTTAAGGACAACCCTTGGATTTGTGA...GGCGCTCAGGGCAAAAGGCACGTGTAGTGTTGCTTCAGAGAAAGTCATCTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
CDS-3UTR CAA 90 bp	TACAAATCCATGCCCTCTGTGCACTGCAGATGTAGATGTGGATGCAGAGACACAATCTGTTTCTCCCCCTaGAAAGGTGAATCTCTCCAG	+
Preference number: 5 (lower is better) Translates to: YKSMPSVHCRCRCGCRDTICFSP*KGESLQ Trigger: CTGGAGAGATTCACCTTTCAAGGGGGAGAAACAGAT...TGTGTCTCTGCATCCACATCTACATCTGCAGTGCACAGAGGGCATGGATTTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055662.4
CDS CAA 72 bp	GGCTTCCCCAGAGACGTGGGGAGGATCCTGAGGCTGTaGGATGAAAGATCTAGCTCCCTGAGCCCAGGAAGG	+
Preference number: 6 (lower is better) Translates to: GFPRDVGRILRL*DERSSSLSPGR Trigger: CCTTCCTGGGCTCAGGGAGCTAGATCTTTCATCCAACAGCCTCAGGATCCTCCCCACGTCTCTGGGGAAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055662.4 ENSMUST00000224708.2 ENSMUST00000224760.2
CDS GCA 72 bp	AGAGGAGAGCCTTTCCCTGCCAGGGTTCAGGCAGCCTaGAGATGGCACCATCTGTTTCTCCCCCTTGAAAGG	+
Preference number: 6 (lower is better) Translates to: RGEPFPARVQAA*RWHHLFLPLER Trigger: CCTTTCAAGGGGGAGAAACAGATGGTGCCATCTGCAGGCTGCCTGAACCCTGGCAGGGAAAGGCTCTCCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224708.2
CDS CCA 72 bp	CCACGGAGTTTGATGATGGGTGGCACAAACATTTCATaGGGCAGCTGCCCACTCCTGGGAGCAGGAGACCCA	+
Preference number: 6 (lower is better) Translates to: PRSLMMGGTNIS*GSCPLLGAGDP Trigger: TGGGTCTCCTGCTCCCAGGAGTGGGCAGCTGCCCCATGAAATGTTTGTGCCACCCATCATCAAACTCCGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055662.4 ENSMUST00000224708.2 ENSMUST00000224760.2
CDS CCA 72 bp	GACCCACACTGGAGACCAGCAGCAGAGTACCTTTCATaGCCCAGGCTCCGCAGCACAAACCCTCATTCAACA	+
Preference number: 6 (lower is better) Translates to: DPHWRPAAEYLS*PRLRSTNPHST Trigger: TGTTGAATGAGGGTTTGTGCTGCGGAGCCTGGGCCATGAAAGGTACTCTGCTGCTGGTCTCCAGTGTGGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224760.2
CDS TCA 72 bp	GGCAGCCTGCAGATGGCACCATCTGTTTCTCCCCCTTaGAAGGTGAATCTCTCCAGCCAGAGTTTCAGACCC	+
Preference number: 6 (lower is better) Translates to: GSLQMAPSVSPP*KVNLSSQSFRP Trigger: GGGTCTGAAACTCTGGCTGGAGAGATTCACCTTTCAAGGGGGAGAAACAGATGGTGCCATCTGCAGGCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224708.2
CDS TCA 72 bp	CACTCCAAGGGATCTTGCTGTCCTGAGCTATTCTCATaGGACTTCTGGGCATCTTGCGGGGCAGAACCAGGC	+
Preference number: 6 (lower is better) Translates to: HSKGSCCPELFS*DFWASCGAEPG Trigger: GCCTGGTTCTGCCCCGCAAGATGCCCAGAAGTCTCATGAGAATAGCTCAGGACAGCAAGATCCCTTGGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224708.2
CDS CCA 72 bp	GACTTCTGGGCATCTTGCGGGGCAGAACCAGGCTGCTaGACTAGTGAGGGTGCCAAATCCTTGAAAGGTGAA	+
Preference number: 6 (lower is better) Translates to: DFWASCGAEPGC*TSEGAKSLKGE Trigger: TTCACCTTTCAAGGATTTGGCACCCTCACTAGTCCAGCAGCCTGGTTCTGCCCCGCAAGATGCCCAGAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224760.2
CDS TCA 72 bp	GGGTTTGGCCTCACACTCCAAGGGATCTTGCTGTCCTaGGCTATTCTCATGAGACTTCTGGGCATCTTGCGG	+
Preference number: 6 (lower is better) Translates to: GFGLTLQGILLS*AILMRLLGILR Trigger: CCGCAAGATGCCCAGAAGTCTCATGAGAATAGCTCAGGACAGCAAGATCCCTTGGAGTGTGAGGCCAAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224708.2
CDS CCA 72 bp	AAGGTAGAGAACAGGGTTGGTACAGTTCGTGAGGAATaGAGAGGAGAGCCTTTCCCTGCCAGGGTTCAGGCA	+
Preference number: 6 (lower is better) Translates to: KVENRVGTVREE*RGEPFPARVQA Trigger: TGCCTGAACCCTGGCAGGGAAAGGCTCTCCTCTCCATTCCTCACGAACTGTACCAACCCTGTTCTCTACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224708.2
CDS CCA 72 bp	CACGCAGGCCGGCCACTGAGGCTACTGTGGCTGACTTaGTCGTCAGACTGTGTAAGACTGATATCACATGAA	+
Preference number: 6 (lower is better) Translates to: HAGRPLRLLWLT*SSDCVRLISHE Trigger: TTCATGTGATATCAGTCTTACACAGTCTGACGACCAAGTCAGCCACAGTAGCCTCAGTGGCCGGCCTGCGTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224708.2
CDS CAA 72 bp	AGGCAGCCTGCAGATGGCACCATCTGTTTCTCCCCCTaGAAAGGTGAATCTCTCCAGCCAGAGTTTCAGACC	+
Preference number: 6 (lower is better) Translates to: RQPADGTICFSP*KGESLQPEFQT Trigger: GGTCTGAAACTCTGGCTGGAGAGATTCACCTTTCAAGGGGGAGAAACAGATGGTGCCATCTGCAGGCTGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224708.2
CDS CAA 90 bp	ACAGTAGCCACAGCATGGCGCAGGTTGGTTGGCTTTGGTTTGGGTTaGGCCTCACACTCCAAGGGATCTTGCTGTCCTGAGCTATTCTCA	+
Preference number: 6 (lower is better) Translates to: TVATAWRRLVGFGLG*ASHSKGSCCPELFS Trigger: TGAGAATAGCTCAGGACAGCAAGATCCCTTGGAGTGTGAGGCCAAACCCAAACCAAAGCCAACCAACCTGCGCCATGCTGTGGCTACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224708.2
CDS TCA 72 bp	AACCAGGCTGCTGGACTAGTGAGGGTGCCAAATCCTTaGAAGGTGAATCTCTCCAGCCAGAGTTTCAGACCC	+
Preference number: 6 (lower is better) Translates to: NQAAGLVRVPNP*KVNLSSQSFRP Trigger: GGGTCTGAAACTCTGGCTGGAGAGATTCACCTTTCAAGGATTTGGCACCCTCACTAGTCCAGCAGCCTGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224760.2
CDS CAA 72 bp	GAACCAGGCTGCTGGACTAGTGAGGGTGCCAAATCCTaGAAAGGTGAATCTCTCCAGCCAGAGTTTCAGACC	+
Preference number: 6 (lower is better) Translates to: EPGCWTSEGAKS*KGESLQPEFQT Trigger: GGTCTGAAACTCTGGCTGGAGAGATTCACCTTTCAAGGATTTGGCACCCTCACTAGTCCAGCAGCCTGGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224760.2
CDS CAA 90 bp	AGCCAGAGTTTCAGACCCAGTAAGTGGCAGTCACAAATCCAAGGGTaGTCCTTAAGAAGTACCAGCCTCACCTTGGGCATGGCCTCTAGA	+
Preference number: 6 (lower is better) Translates to: SQSFRPSKWQSQIQG*SLRSTSLTLGMASR Trigger: TCTAGAGGCCATGCCCAAGGTGAGGCTGGTACTTCTTAAGGACAACCCTTGGATTTGTGACTGCCACTTACTGGGTCTGAAACTCTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055662.4 ENSMUST00000224708.2 ENSMUST00000224760.2
CDS CCA 72 bp	ACCTTGGGCATGGCCTCTAGAAGTTCACGATCCAGATaGAGAAGATGGTTCTGCTGCACAGCAAACACAGTC	+
Preference number: 6 (lower is better) Translates to: TLGMASRSSRSR*RRWFCCTANTV Trigger: GACTGTGTTTGCTGTGCAGCAGAACCATCTTCTCCATCTGGATCGTGAACTTCTAGAGGCCATGCCCAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055662.4 ENSMUST00000224708.2 ENSMUST00000224760.2
CDS TCA 72 bp	TGCAGATGGCACCATCTGTTTCTCCCCCTTGAAAGGTaGATCTCTCCAGCCAGAGTTTCAGACCCAGTAAGT	+
Preference number: 6 (lower is better) Translates to: CRWHHLFLPLER*ISPARVSDPVS Trigger: ACTTACTGGGTCTGAAACTCTGGCTGGAGAGATTCACCTTTCAAGGGGGAGAAACAGATGGTGCCATCTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055662.4 ENSMUST00000224708.2
CDS GCA 72 bp	AGAAGTTCACGATCCAGATGGAGAAGATGGTTCTGCTaGACAGCAAACACAGTCAGGTTCTCCCAAGGCTTC	+
Preference number: 6 (lower is better) Translates to: RSSRSRWRRWFC*TANTVRFSQGF Trigger: GAAGCCTTGGGAGAACCTGACTGTGTTTGCTGTGCAGCAGAACCATCTTCTCCATCTGGATCGTGAACTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055662.4 ENSMUST00000224708.2 ENSMUST00000224760.2
CDS CCA 72 bp	GATGAAAGATCTAGCTCCCTGAGCCCAGGAAGGGCATaGGCAAAGCTGCTTTCTATGGAAAGCAGGGAATTT	+
Preference number: 6 (lower is better) Translates to: DERSSSLSPGRA*AKLLSMESREF Trigger: AAATTCCCTGCTTTCCATAGAAAGCAGCTTTGCCCATGCCCTTCCTGGGCTCAGGGAGCTAGATCTTTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055662.4 ENSMUST00000224708.2 ENSMUST00000224760.2
CDS CCA 72 bp	ATGGCCTCTAGAAGTTCACGATCCAGATGGAGAAGATaGTTCTGCTGCACAGCAAACACAGTCAGGTTCTCC	+
Preference number: 6 (lower is better) Translates to: MASRSSRSRWRR*FCCTANTVRFS Trigger: GGAGAACCTGACTGTGTTTGCTGTGCAGCAGAACCATCTTCTCCATCTGGATCGTGAACTTCTAGAGGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055662.4 ENSMUST00000224708.2 ENSMUST00000224760.2
CDS CAA 72 bp	TTCAGACCCAGTAAGTGGCAGTCACAAATCCAAGGGTaGTCCTTAAGAAGTACCAGCCTCACCTTGGGCATG	+
Preference number: 6 (lower is better) Translates to: FRPSKWQSQIQG*SLRSTSLTLGM Trigger: CATGCCCAAGGTGAGGCTGGTACTTCTTAAGGACAACCCTTGGATTTGTGACTGCCACTTACTGGGTCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055662.4 ENSMUST00000224708.2 ENSMUST00000224760.2
CDS CCA 72 bp	GTGAATCTCTCCAGCCAGAGTTTCAGACCCAGTAAGTaGCAGTCACAAATCCAAGGGTTGTCCTTAAGAAGT	+
Preference number: 6 (lower is better) Translates to: VNLSSQSFRPSK*QSQIQGLSLRS Trigger: ACTTCTTAAGGACAACCCTTGGATTTGTGACTGCCACTTACTGGGTCTGAAACTCTGGCTGGAGAGATTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055662.4 ENSMUST00000224708.2 ENSMUST00000224760.2

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu