Pregenerated sensors for LRSAM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026792Ensembl transcript IDs: ENSMUST00000028132.14, ENSMUST00000113200.8, ENSMUST00000124492.8, ENSMUST00000127321.8, ENSMUST00000133832.8, ENSMUST00000145578.8, ENSMUST00000147528.8, ENSMUST00000191838.6, ENSMUST00000195713.2
Found 307 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTGAGTCCTGCAGGGCCACCTCCCTACGCTGGACCTTGGCCCCCTaGCCCAAGGCTCCACCACCAGCAGATTTGCCCTGTCTTTTGTTC | + |
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Preference number: 1 (lower is better) Translates to: PESCRATSLRWTLAP*PKAPPPADLPCLLF Trigger: GAACAAAAGACAGGGCAAATCTGCTGGTGGTGGAGCCTTGGGGCAGGGGGCCAAGGTCCAGCGTAGGGAGGTGGCCCTGCAGGACTCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR GCA 90 bp | GGGTGTAGCGCTGAGGCTTGGCTACTAACATGGATTCCTGAGTCCTaGAGGGCCACCTCCCTACGCTGGACCTTGGCCCCCTGCCCCAAG | + |
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Preference number: 1 (lower is better) Translates to: GCSAEAWLLTWIPES*RATSLRWTLAPCPK Trigger: CTTGGGGCAGGGGGCCAAGGTCCAGCGTAGGGAGGTGGCCCTGCAGGACTCAGGAATCCATGTTAGTAGCCAAGCCTCAGCGCTACACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR GCA 90 bp | GGGTCGGGGTGGCAGGTGGTGGGTGACAAAGGCCTATGGCAGTCTTaGCCTAGTCTGGGGAATGAGGGTAGGTGGGAGTCCAGCAGTGGT | + |
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Preference number: 1 (lower is better) Translates to: GSGWQVVGDKGLWQS*PSLGNEGRWESSSG Trigger: ACCACTGCTGGACTCCCACCTACCCTCATTCCCCAGACTAGGGCAAGACTGCCATAGGCCTTTGTCACCCACCACCTGCCACCCCGACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR CCA 90 bp | GGACACCTCCAGGAGGGGCAGACAGCTGGGTGTAGCGCTGAGGCTTaGCTACTAACATGGATTCCTGAGTCCTGCAGGGCCACCTCCCTA | + |
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Preference number: 1 (lower is better) Translates to: GHLQEGQTAGCSAEA*LLTWIPESCRATSL Trigger: TAGGGAGGTGGCCCTGCAGGACTCAGGAATCCATGTTAGTAGCCAAGCCTCAGCGCTACACCCAGCTGTCTGCCCCTCCTGGAGGTGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR GCA 90 bp | CTGTTCAGAATAGCTATGTCACAGGCCAGGAACATTCCACCTGCCTaGCTAGTGCTCAGAGCAGTGGGGGTCGGGGTGGCAGGTGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: LFRIAMSQARNIPPA*LVLRAVGVGVAGGG Trigger: CCCACCACCTGCCACCCCGACCCCCACTGCTCTGAGCACTAGGCAGGCAGGTGGAATGTTCCTGGCCTGTGACATAGCTATTCTGAACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR TCA 90 bp | CTTCCCGCTGCTTCTTCTCTTTCAGGAGCTGCTGGAGCAGGTTGCTaGGTGCCCAGCGCTGCTCTGAGACCATCTCCTGAAGCGTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: LPAASSLSGAAGAGC*VPSAALRPSPEASL Trigger: CAGAGACGCTTCAGGAGATGGTCTCAGAGCAGCGCTGGGCACTCAGCAACCTGCTCCAGCAGCTCCTGAAAGAGAAGAAGCAGCGGGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195713.2 |
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| 3UTR CCA 90 bp | AAAGGCCTATGGCAGTCTTGCCCTAGTCTGGGGAATGAGGGTAGGTaGGAGTCCAGCAGTGGTGGAGATGGTACCAAGGAAGGGCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: KGLWQSCPSLGNEGR*ESSSGGDGTKEGPG Trigger: CCCTGGCCCTTCCTTGGTACCATCTCCACCACTGCTGGACTCCCACCTACCCTCATTCCCCAGACTAGGGCAAGACTGCCATAGGCCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR CCA 90 bp | GGCAGGTGGTGGGTGACAAAGGCCTATGGCAGTCTTGCCCTAGTCTaGGGAATGAGGGTAGGTGGGAGTCCAGCAGTGGTGGAGATGGTA | + |
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Preference number: 1 (lower is better) Translates to: GRWWVTKAYGSLALV*GMRVGGSPAVVEMV Trigger: TACCATCTCCACCACTGCTGGACTCCCACCTACCCTCATTCCCCAGACTAGGGCAAGACTGCCATAGGCCTTTGTCACCCACCACCTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR CCA 90 bp | CCATGGAGTTCCTCTTCCCGCTGCTTCTTCTCTTTCAGGAGCTGCTaGAGCAGGTTGCTGAGTGCCCAGCGCTGCTCTGAGACCATCTCC | + |
|
Preference number: 1 (lower is better) Translates to: PWSSSSRCFFSFRSC*SRLLSAQRCSETIS Trigger: GGAGATGGTCTCAGAGCAGCGCTGGGCACTCAGCAACCTGCTCCAGCAGCTCCTGAAAGAGAAGAAGCAGCGGGAAGAGGAACTCCATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195713.2 |
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| 3UTR TCA 90 bp | CACATGGAACCCTTCACTACAGCTGGTGAGGGTGGGCTGCCCCTCTaGAAGTTAACATGCCTTCCAGTTGCCTCAGCAGCCCCCTCACCT | + |
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Preference number: 1 (lower is better) Translates to: HMEPFTTAGEGGLPL*KLTCLPVASAAPSP Trigger: AGGTGAGGGGGCTGCTGAGGCAACTGGAAGGCATGTTAACTTTCAGAGGGGCAGCCCACCCTCACCAGCTGTAGTGAAGGGTTCCATGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR GCA 90 bp | ATGCCATGGAGTTCCTCTTCCCGCTGCTTCTTCTCTTTCAGGAGCTaGTGGAGCAGGTTGCTGAGTGCCCAGCGCTGCTCTGAGACCATC | + |
|
Preference number: 1 (lower is better) Translates to: MPWSSSSRCFFSFRS*WSRLLSAQRCSETI Trigger: GATGGTCTCAGAGCAGCGCTGGGCACTCAGCAACCTGCTCCAGCAGCTCCTGAAAGAGAAGAAGCAGCGGGAAGAGGAACTCCATGGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195713.2 |
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| 3UTR CCA 90 bp | ACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTAGGACGGGATaGCTGATACATTCCACAGATATGGACACCTCCAGGAGGGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: TTHPFPETLVHLRTG*LIHSTDMDTSRRGR Trigger: TCTGCCCCTCCTGGAGGTGTCCATATCTGTGGAATGTATCAGCCATCCCGTCCTAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR CCA 90 bp | GCCATATACACTATACTGGGGAGGGCAGTAGGGTGCCATGTCACATaGAACCCTTCACTACAGCTGGTGAGGGTGGGCTGCCCCTCTGAA | + |
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Preference number: 1 (lower is better) Translates to: AIYTILGRAVGCHVT*NPSLQLVRVGCPSE Trigger: TTCAGAGGGGCAGCCCACCCTCACCAGCTGTAGTGAAGGGTTCCATGTGACATGGCACCCTACTGCCCTCCCCAGTATAGTGTATATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR TCA 90 bp | ACTGGTGAGTCCCAGGGTCTGCCGGCTTCAGCTTCCTCAGTACTTTaGTTACATGTACTGGCCTGGCTCTGTGAGATCTGGGGAGCCAGA | + |
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Preference number: 1 (lower is better) Translates to: TGESQGLPASASSVL*LHVLAWLCEIWGAR Trigger: TCTGGCTCCCCAGATCTCACAGAGCCAGGCCAGTACATGTAATCAAAGTACTGAGGAAGCTGAAGCCGGCAGACCCTGGGACTCACCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR CCA 90 bp | TGCAGATATGGGAGGGTGGGTGTTCAGAAAGAAGCAAAAGGGTGCTaGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCA | + |
|
Preference number: 1 (lower is better) Translates to: CRYGRVGVQKEAKGC*GVLHNPPLPRDTGA Trigger: TGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGCACCCTTTTGCTTCTTTCTGAACACCCACCCTCCCATATCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR TCA 90 bp | CTCATTAGCCTGGAACTCACTAACTCGGTTAGCTTGGCTGACTGGTaGGTCCCAGGGTCTGCCGGCTTCAGCTTCCTCAGTACTTTGATT | + |
|
Preference number: 1 (lower is better) Translates to: LISLELTNSVSLADW*VPGSAGFSFLSTLI Trigger: AATCAAAGTACTGAGGAAGCTGAAGCCGGCAGACCCTGGGACTCACCAGTCAGCCAAGCTAACCGAGTTAGTGAGTTCCAGGCTAATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR TCA 90 bp | GTGGAAGCCAAAGGATCTCGGATCATTCCGCCTCGTGTTTTGAGATaGGGTCTCATTAGCCTGGAACTCACTAACTCGGTTAGCTTGGCT | + |
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Preference number: 1 (lower is better) Translates to: VEAKGSRIIPPRVLR*GLISLELTNSVSLA Trigger: AGCCAAGCTAACCGAGTTAGTGAGTTCCAGGCTAATGAGACCTCATCTCAAAACACGAGGCGGAATGATCCGAGATCCTTTGGCTTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR GCA 90 bp | TCTCATGGACCTAGGGGTGACTCTGCAAGGAGTCAGATTTACTGGTaGTCCTGTTTTGAATCAACCTGCCTGTGTAGGCTAAGGATGCAG | + |
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Preference number: 1 (lower is better) Translates to: SHGPRGDSARSQIYW*SCFESTCLCRLRMQ Trigger: CTGCATCCTTAGCCTACACAGGCAGGTTGATTCAAAACAGGAGCACCAGTAAATCTGACTCCTTGCAGAGTCACCCCTAGGTCCATGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR GCA 90 bp | AGTAACTCAGTTTCTATTAGCCTAATCTGGTTCCTGATCTGCCGATaGATCAGGTCCTTCTTCACCTGGAGAGCCTCGAAGGCAGCCTTC | + |
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Preference number: 1 (lower is better) Translates to: SNSVSISLIWFLICR*IRSFFTWRASKAAF Trigger: GAAGGCTGCCTTCGAGGCTCTCCAGGTGAAGAAGGACCTGATGCATCGGCAGATCAGGAACCAGATTAGGCTAATAGAAACTGAGTTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195713.2 |
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| 3UTR CCA 90 bp | AGTTCTCATGGACCTAGGGGTGACTCTGCAAGGAGTCAGATTTACTaGTGCTCCTGTTTTGAATCAACCTGCCTGTGTAGGCTAAGGATG | + |
|
Preference number: 1 (lower is better) Translates to: SSHGPRGDSARSQIY*CSCFESTCLCRLRM Trigger: CATCCTTAGCCTACACAGGCAGGTTGATTCAAAACAGGAGCACCAGTAAATCTGACTCCTTGCAGAGTCACCCCTAGGTCCATGAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR GCA 90 bp | TGCTCATCAATAAACGCTTTATTTAAAGCTCATTTCCTCATGTGCTaGTGGGGTGGGGGAGATCTGGGCCTACCGTATCTAGGGATCCAT | + |
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Preference number: 1 (lower is better) Translates to: CSSINALFKAHFLMC*WGGGDLGLPYLGIH Trigger: ATGGATCCCTAGATACGGTAGGCCCAGATCTCCCCCACCCCAGCAGCACATGAGGAAATGAGCTTTAAATAAAGCGTTTATTGATGAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR CCA 90 bp | TCATCAATAAACGCTTTATTTAAAGCTCATTTCCTCATGTGCTGCTaGGGTGGGGGAGATCTGGGCCTACCGTATCTAGGGATCCATTCA | + |
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Preference number: 1 (lower is better) Translates to: SSINALFKAHFLMCC*GGGDLGLPYLGIHS Trigger: TGAATGGATCCCTAGATACGGTAGGCCCAGATCTCCCCCACCCCAGCAGCACATGAGGAAATGAGCTTTAAATAAAGCGTTTATTGATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR TCA 90 bp | GTTTCAAGGACAAAGGCTTCTGGTTTAAAAGCCGTTGGTACTGGATaGGCCAGTAATTTTCCTGCTTCGTTTCGCTCTTGGCCTCTAATT | + |
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Preference number: 1 (lower is better) Translates to: VSRTKASGLKAVGTG*ASNFPASFRSWPLI Trigger: AATTAGAGGCCAAGAGCGAAACGAAGCAGGAAAATTACTGGCTCATCCAGTACCAACGGCTTTTAAACCAGAAGCCTTTGTCCTTGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195713.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGAGTCCTGCAGGGCCACCTCCCTACGCTGGACCTTGGCCCCCTGCCCCACAGCAGTGGTGGAGATaGTACCAAGGAAGGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: FLSPAGPPPYAGPWPPAPQQWWR*YQGRAR Trigger: CCTGGCCCTTCCTTGGTACCATCTCCACCACTGCTG...TGGGGCAGGGGGCCAAGGTCCAGCGTAGGGAGGTGGCCCTGCAGGACTCAGGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTAGGCCCTACGCTGGACCTTaGCCCCCTGCCCCAAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: AGESCTTHPFPETLVHLRPYAGP*PPAPRL Trigger: GAGCCTTGGGGCAGGGGGCCAAGGTCCAGCGTAGGG...CCTAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR CAA 90 bp | ACATGGATTCCTGAGTCCTGCAGGGCCACCTCCCTACGCTGGACCTaGGCCCCCTGCCCCAAGGCTCCACCACCAGCAGATTTGCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: TWIPESCRATSLRWT*APCPKAPPPADLPC Trigger: ACAGGGCAAATCTGCTGGTGGTGGAGCCTTGGGGCAGGGGGCCAAGGTCCAGCGTAGGGAGGTGGCCCTGCAGGACTCAGGAATCCATGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTGGGGGTCGGGGTGGCAGGTGGTGGGTGACAAAGGCCTATGGCAGTCTTGCGGGAATGAGGGTAGGTaGGAGTCCAGCAGTGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: QWGSGWQVVGDKGLWQSCGNEGR*ESSSGG Trigger: TCCACCACTGCTGGACTCCCACCTACCCTCATTCCC...GCAAGACTGCCATAGGCCTTTGTCACCCACCACCTGCCACCCCGACCCCCACTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTAGGCGGGGTGGCAGGTGGTaGGTGACAAAGGCCTATGGC | + |
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Preference number: 2 (lower is better) Translates to: AGESCTTHPFPETLVHLRRGGRW*VTKAYG Trigger: GCCATAGGCCTTTGTCACCCACCACCTGCCACCCCG...CCTAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR-3UTR TCA 90 bp | TCATTCGGCTCAGCATGTCCAGTGAGATGCGGTGGTGGGCGAAGAGGGGCAGGTTGCCCAGCGCTGCTCTaGGACCATCTCCTGAAGCGT | + |
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Preference number: 2 (lower is better) Translates to: SFGSACPVRCGGGRRGAGCPALL*DHLLKR Trigger: ACGCTTCAGGAGATGGTCTCAGAGCAGCGCTGGGCA...ACCTGCCCCTCTTCGCCCACCACCGCATCTCACTGGACATGCTGAGCCGAATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195713.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAACATTCCACCTGCCTGCCTAGTGCTCAGAGCAGTGGGGGTCGGGGTGGCAGGGAATGAGGGTAGGTaGGAGTCCAGCAGTGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: RNIPPACLVLRAVGVGVAGNEGR*ESSSGG Trigger: TCCACCACTGCTGGACTCCCACCTACCCTCATTCCC...TGCCACCCCGACCCCCACTGCTCTGAGCACTAGGCAGGCAGGTGGAATGTTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR-3UTR CCA 90 bp | CTTAGGACGGGATGGCTGATACATTCCACAGATATGGACACCTCCAGGAGGGGCCCCTACGCTGGACCTTaGCCCCCTGCCCCAAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: LRTGWLIHSTDMDTSRRGPYAGP*PPAPRL Trigger: GAGCCTTGGGGCAGGGGGCCAAGGTCCAGCGTAGGG...GCCCCTCCTGGAGGTGTCCATATCTGTGGAATGTATCAGCCATCCCGTCCTAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR-3UTR CCA 90 bp | TATACTGGGGAGGGCAGTAGGGTGCCATGTCACATGGAACCCTTCACTACAGCTGCCACCTCCCTACGCTaGACCTTGGCCCCCTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: YTGEGSRVPCHMEPFTTAATSLR*TLAPCP Trigger: GGGGCAGGGGGCCAAGGTCCAGCGTAGGGAGGTGGC...AGCTGTAGTGAAGGGTTCCATGTGACATGGCACCCTACTGCCCTCCCCAGTATA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR-3UTR CCA 90 bp | GTTGCCTCAGCAGCCCCCTCACCTAGGATAATCATTGCAGGAACACAACCTGTCGCCACCTCCCTACGCTaGACCTTGGCCCCCTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: VASAAPSPRIIIAGTQPVATSLR*TLAPCP Trigger: GGGGCAGGGGGCCAAGGTCCAGCGTAGGGAGGTGGC...GACAGGTTGTGTTCCTGCAATGATTATCCTAGGTGAGGGGGCTGCTGAGGCAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR-3UTR TCA 90 bp | GTTGCCTCAGCAGCCCCCTCACCTAGGATAATCATTGCAGGAACACAACCTGTCCTGTTGCCTTCCCTCTaGCCCAGGGGCAGCAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: VASAAPSPRIIIAGTQPVLLPSL*PRGSSS Trigger: AGAGCTGCTGCCCCTGGGTCAGAGGGAAGGCAACAG...GACAGGTTGTGTTCCTGCAATGATTATCCTAGGTGAGGGGGCTGCTGAGGCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR-3UTR CCA 90 bp | GTGCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTAGTGGGAGTCCAGCAGTaGTGGAGATGGTACCAAGGA | + |
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Preference number: 2 (lower is better) Translates to: VLGSLAQPTPSQRHWCTLVGVQQ*WRWYQG Trigger: TCCTTGGTACCATCTCCACCACTGCTGGACTCCCAC...TAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTAGGGGTGACAAAGGCCTATaGCAGTCTTGCCCTAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: AGESCTTHPFPETLVHLRGDKGL*QSCPSL Trigger: CAGACTAGGGCAAGACTGCCATAGGCCTTTGTCACC...CCTAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR-3UTR CCA 90 bp | CTTAGGACGGGATGGCTGATACATTCCACAGATATGGACACCTCCAGGAGGGGCGGTCGGGGTGGCAGGTaGTGGGTGACAAAGGCCTAT | + |
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Preference number: 2 (lower is better) Translates to: LRTGWLIHSTDMDTSRRGGRGGR*WVTKAY Trigger: ATAGGCCTTTGTCACCCACCACCTGCCACCCCGACC...GCCCCTCCTGGAGGTGTCCATATCTGTGGAATGTATCAGCCATCCCGTCCTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGTCTCATTAGCCTGGAACTCACTAACTCGGTTAGCTTGGCTGACTGGTGAGCTTCACTACAGCTGGTaGGGGTGGGCTGCCCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: EVSLAWNSLTRLAWLTGELHYSW*GWAAPL Trigger: CAGAGGGGCAGCCCACCCTCACCAGCTGTAGTGAAG...CTCACCAGTCAGCCAAGCTAACCGAGTTAGTGAGTTCCAGGCTAATGAGACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGTCTCATTAGCCTGGAACTCACTAACTCGGTTAGCTTGGCTGACTGGTGAGCCTCTCCCCGGACTCTaGCTACTCCTACCCCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: EVSLAWNSLTRLAWLTGEPLPGL*LLLPLP Trigger: TGGGAGGGGTAGGAGTAGGCAGAGTCCGGGGAGAGG...CTCACCAGTCAGCCAAGCTAACCGAGTTAGTGAGTTCCAGGCTAATGAGACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR-3UTR GCA 90 bp | TCATTCGGCTCAGCATGTCCAGTGAGATGCGGTGGTGGGCGAAGAGGGGCAGGTTTCCTGATCTGCCGATaGATCAGGTCCTTCTTCACC | + |
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Preference number: 2 (lower is better) Translates to: SFGSACPVRCGGGRRGAGFLICR*IRSFFT Trigger: GGTGAAGAAGGACCTGATGCATCGGCAGATCAGGAA...ACCTGCCCCTCTTCGCCCACCACCGCATCTCACTGGACATGCTGAGCCGAATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195713.2 |
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| 3UTR-3UTR CCA 90 bp | TATACTGGGGAGGGCAGTAGGGTGCCATGTCACATGGAACCCTTCACTACAGCTGGTCGGGGTGGCAGGTaGTGGGTGACAAAGGCCTAT | + |
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Preference number: 2 (lower is better) Translates to: YTGEGSRVPCHMEPFTTAGRGGR*WVTKAY Trigger: ATAGGCCTTTGTCACCCACCACCTGCCACCCCGACC...AGCTGTAGTGAAGGGTTCCATGTGACATGGCACCCTACTGCCCTCCCCAGTATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTAGGGCTTGGCTACTAACATaGATTCCTGAGTCCTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: AGESCTTHPFPETLVHLRAWLLT*IPESCR Trigger: CCTGCAGGACTCAGGAATCCATGTTAGTAGCCAAGC...CCTAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGTCTCATTAGCCTGGAACTCACTAACTCGGTTAGCTTGGCTGACTGGTGAGAACATGCCTTCCAGTTaGCTCAGCAGCCCCCTCACC | + |
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Preference number: 2 (lower is better) Translates to: EVSLAWNSLTRLAWLTGENMPSS*LSSPLT Trigger: GGTGAGGGGGCTGCTGAGGCAACTGGAAGGCATGTT...CTCACCAGTCAGCCAAGCTAACCGAGTTAGTGAGTTCCAGGCTAATGAGACCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCTGATCTGCCGATGCATCAGGTCCTTCTTCACCTGGAGAGCCTCGAAGGCACCTGAAGGATCTGGCTaGTGGCTTTGTTCTGATCCA | + |
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Preference number: 2 (lower is better) Translates to: FLICRCIRSFFTWRASKAPEGSG*WLCSDP Trigger: TGGATCAGAACAAAGCCATCAGCCAGATCCTTCAGG...TGCCTTCGAGGCTCTCCAGGTGAAGAAGGACCTGATGCATCGGCAGATCAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195713.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCTGATCTGCCGATGCATCAGGTCCTTCTTCACCTGGAGAGCCTCGAAGGCATGCATTACACTCTCCTaGAGGATCTGGCTGATGGCT | + |
|
Preference number: 2 (lower is better) Translates to: FLICRCIRSFFTWRASKACITLS*RIWLMA Trigger: AGCCATCAGCCAGATCCTTCAGGAGAGTGTAATGCA...TGCCTTCGAGGCTCTCCAGGTGAAGAAGGACCTGATGCATCGGCAGATCAGGAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195713.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGCACCTTAGGACGGGATGGCTGATACATTCCACAGATATGGACACCTCCAGGGGTGACAAAGGCCTATaGCAGTCTTGCCCTAGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: VHLRTGWLIHSTDMDTSRGDKGL*QSCPSL Trigger: CAGACTAGGGCAAGACTGCCATAGGCCTTTGTCACC...CCTGGAGGTGTCCATATCTGTGGAATGTATCAGCCATCCCGTCCTAAGGTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGGTCTCATTAGCCTGGAACTCACTAACTCGGTTAGCTTGGCTGACTGGTGAGAACATTCCACCTGCCTaGCTAGTGCTCAGAGCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: EVSLAWNSLTRLAWLTGENIPPA*LVLRAV Trigger: CACTGCTCTGAGCACTAGGCAGGCAGGTGGAATGTT...CTCACCAGTCAGCCAAGCTAACCGAGTTAGTGAGTTCCAGGCTAATGAGACCTC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR-3UTR CCA 90 bp | TACAAATTCACATGTGCATGTGGAAGCCAAAGGATCTCGGATCATTCCGCCTCGCAGCAGTGGTGGAGATaGTACCAAGGAAGGGCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: YKFTCACGSQRISDHSASQQWWR*YQGRAR Trigger: CCTGGCCCTTCCTTGGTACCATCTCCACCACTGCTG...CGAGGCGGAATGATCCGAGATCCTTTGGCTTCCACATGCACATGTGAATTTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGGTCTCATTAGCCTGGAACTCACTAACTCGGTTAGCTTGGCTGACTGGTGAGCACCACCAGCAGATTTaGCCTGTCTTTTGTTCACTG | + |
|
Preference number: 2 (lower is better) Translates to: EVSLAWNSLTRLAWLTGEHHQQI*PVFCSL Trigger: CAGTGAACAAAAGACAGGGCAAATCTGCTGGTGGTG...CTCACCAGTCAGCCAAGCTAACCGAGTTAGTGAGTTCCAGGCTAATGAGACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAGGTACAAATTCACATGTGCATGTGGAAGCCAAAGGATCTCGGATCATTCCGGGGCAATGTTTCTGTTaGCTTCCCTCTGACCCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: TGTNSHVHVEAKGSRIIPGQCFC*LPSDPG Trigger: CCCTGGGTCAGAGGGAAGGCAACAGAAACATTGCCC...CGGAATGATCCGAGATCCTTTGGCTTCCACATGCACATGTGAATTTGTACCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTAATTTTCCTGCTTCGTTTCGCTCTTGGCCTCTAATTCCGCCAGGATGCCATTTCTCTTTCAGGAGCTaGTGGAGCAGGTTGCTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: SNFPASFRSWPLIPPGCHFSFRS*WSRLLS Trigger: ACTCAGCAACCTGCTCCAGCAGCTCCTGAAAGAGAA...ATGGCATCCTGGCGGAATTAGAGGCCAAGAGCGAAACGAAGCAGGAAAATTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195713.2 |
||
| 3UTR-3UTR CCA 90 bp | TACAAATTCACATGTGCATGTGGAAGCCAAAGGATCTCGGATCATTCCGCCTCGGCTTGGCTACTAACATaGATTCCTGAGTCCTGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: YKFTCACGSQRISDHSASAWLLT*IPESCR Trigger: CCTGCAGGACTCAGGAATCCATGTTAGTAGCCAAGC...CGAGGCGGAATGATCCGAGATCCTTTGGCTTCCACATGCACATGTGAATTTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGGTACAAATTCACATGTGCATGTGGAAGCCAAAGGATCTCGGATCATTCCGCTAACTCGGTTAGCTTaGCTGACTGGTGAGTCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: TGTNSHVHVEAKGSRIIPLTRLA*LTGESQ Trigger: CTGGGACTCACCAGTCAGCCAAGCTAACCGAGTTAG...CGGAATGATCCGAGATCCTTTGGCTTCCACATGCACATGTGAATTTGTACCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR-3UTR TCA 90 bp | TACAAATTCACATGTGCATGTGGAAGCCAAAGGATCTCGGATCATTCCGCCTCGGCTTCCTCAGTACTTTaGTTACATGTACTGGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: YKFTCACGSQRISDHSASASSVL*LHVLAW Trigger: CCAGGCCAGTACATGTAATCAAAGTACTGAGGAAGC...CGAGGCGGAATGATCCGAGATCCTTTGGCTTCCACATGCACATGTGAATTTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCAGTTTCAAGGACAAAGGCTTCTGGTTTAAAAGCCGTTGGTACTGGATGAGCATCTGGTTCCTGATCTaGCGATGCATCAGGTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: CSFKDKGFWFKSRWYWMSIWFLI*RCIRSF Trigger: GAAGGACCTGATGCATCGGCAGATCAGGAACCAGAT...GCTCATCCAGTACCAACGGCTTTTAAACCAGAAGCCTTTGTCCTTGAAACTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195713.2 |
||
| 3UTR-3UTR CCA 90 bp | TATACTGGGGAGGGCAGTAGGGTGCCATGTCACATGGAACCCTTCACTACAGCTAGGAGTCAGATTTACTaGTGCTCCTGTTTTGAATCA | + |
|
Preference number: 2 (lower is better) Translates to: YTGEGSRVPCHMEPFTTARSQIY*CSCFES Trigger: TGATTCAAAACAGGAGCACCAGTAAATCTGACTCCT...AGCTGTAGTGAAGGGTTCCATGTGACATGGCACCCTACTGCCCTCCCCAGTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR GCA 72 bp | GCTGAGGCTTGGCTACTAACATGGATTCCTGAGTCCTaGAGGGCCACCTCCCTACGCTGGACCTTGGCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: AEAWLLTWIPES*RATSLRWTLAP Trigger: GGGGGCCAAGGTCCAGCGTAGGGAGGTGGCCCTGCAGGACTCAGGAATCCATGTTAGTAGCCAAGCCTCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR CCA 72 bp | GGGTCGGGGTGGCAGGTGGTGGGTGACAAAGGCCTATaGCAGTCTTGCCCTAGTCTGGGGAATGAGGGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: GSGWQVVGDKGL*QSCPSLGNEGR Trigger: CCTACCCTCATTCCCCAGACTAGGGCAAGACTGCCATAGGCCTTTGTCACCCACCACCTGCCACCCCGACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR CCA 72 bp | CAGGAGGGGCAGACAGCTGGGTGTAGCGCTGAGGCTTaGCTACTAACATGGATTCCTGAGTCCTGCAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: QEGQTAGCSAEA*LLTWIPESCRA Trigger: GGCCCTGCAGGACTCAGGAATCCATGTTAGTAGCCAAGCCTCAGCGCTACACCCAGCTGTCTGCCCCTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTGCCTCAGCAGCCCCCTCACCTAGGATAATCATTGCAGGAACACAACCTGTCTCCCTACGCTGGACCTaGGCCCCCTGCCCCAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VASAAPSPRIIIAGTQPVSLRWT*APCPKA Trigger: AGCCTTGGGGCAGGGGGCCAAGGTCCAGCGTAGGGA...GACAGGTTGTGTTCCTGCAATGATTATCCTAGGTGAGGGGGCTGCTGAGGCAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR GCA 72 bp | TGGCAGGTGGTGGGTGACAAAGGCCTATGGCAGTCTTaGCCTAGTCTGGGGAATGAGGGTAGGTGGGAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: WQVVGDKGLWQS*PSLGNEGRWES Trigger: GGACTCCCACCTACCCTCATTCCCCAGACTAGGGCAAGACTGCCATAGGCCTTTGTCACCCACCACCTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR TCA 72 bp | CCCTTCACTACAGCTGGTGAGGGTGGGCTGCCCCTCTaGAAGTTAACATGCCTTCCAGTTGCCTCAGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: PFTTAGEGGLPL*KLTCLPVASAA Trigger: GGCTGCTGAGGCAACTGGAAGGCATGTTAACTTTCAGAGGGGCAGCCCACCCTCACCAGCTGTAGTGAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR CCA 72 bp | TGGGTGACAAAGGCCTATGGCAGTCTTGCCCTAGTCTaGGGAATGAGGGTAGGTGGGAGTCCAGCAGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: WVTKAYGSLALV*GMRVGGSPAVV Trigger: CACCACTGCTGGACTCCCACCTACCCTCATTCCCCAGACTAGGGCAAGACTGCCATAGGCCTTTGTCACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR CCA 72 bp | GGGAGGGTGGGTGTTCAGAAAGAAGCAAAAGGGTGCTaGGGAGTCTTGCACAACCCACCCCTTCCCAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: GRVGVQKEAKGC*GVLHNPPLPRD Trigger: GTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGCACCCTTTTGCTTCTTTCTGAACACCCACCCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR CCA 72 bp | ACTATACTGGGGAGGGCAGTAGGGTGCCATGTCACATaGAACCCTTCACTACAGCTGGTGAGGGTGGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TILGRAVGCHVT*NPSLQLVRVGC Trigger: GCAGCCCACCCTCACCAGCTGTAGTGAAGGGTTCCATGTGACATGGCACCCTACTGCCCTCCCCAGTATAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR TCA 72 bp | CTGGAACTCACTAACTCGGTTAGCTTGGCTGACTGGTaGGTCCCAGGGTCTGCCGGCTTCAGCTTCCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LELTNSVSLADW*VPGSAGFSFLS Trigger: ACTGAGGAAGCTGAAGCCGGCAGACCCTGGGACTCACCAGTCAGCCAAGCTAACCGAGTTAGTGAGTTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR TCA 72 bp | GCTTCTTCTCTTTCAGGAGCTGCTGGAGCAGGTTGCTaGGTGCCCAGCGCTGCTCTGAGACCATCTCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: ASSLSGAAGAGC*VPSAALRPSPE Trigger: TTCAGGAGATGGTCTCAGAGCAGCGCTGGGCACTCAGCAACCTGCTCCAGCAGCTCCTGAAAGAGAAGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195713.2 |
||
| 3UTR CCA 72 bp | TGGCAGTCTTGCCCTAGTCTGGGGAATGAGGGTAGGTaGGAGTCCAGCAGTGGTGGAGATGGTACCAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: WQSCPSLGNEGR*ESSSGGDGTKE Trigger: TTCCTTGGTACCATCTCCACCACTGCTGGACTCCCACCTACCCTCATTCCCCAGACTAGGGCAAGACTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR TCA 72 bp | TCCCAGAGACACTGGTGCACCTTAGGACGGGATGGCTaGTACATTCCACAGATATGGACACCTCCAGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SQRHWCTLGRDG*YIPQIWTPPGG Trigger: CCCTCCTGGAGGTGTCCATATCTGTGGAATGTATCAGCCATCCCGTCCTAAGGTGCACCAGTGTCTCTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR GCA 72 bp | AATTCCGCCAGGATGCCATGGAGTTCCTCTTCCCGCTaGTTCTTCTCTTTCAGGAGCTGCTGGAGCAGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: NSARMPWSSSSR*FFSFRSCWSRL Trigger: CAACCTGCTCCAGCAGCTCCTGAAAGAGAAGAAGCAGCGGGAAGAGGAACTCCATGGCATCCTGGCGGAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195713.2 |
||
| 3UTR CCA 72 bp | CCCTTCCCAGAGACACTGGTGCACCTTAGGACGGGATaGCTGATACATTCCACAGATATGGACACCTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PFPETLVHLRTG*LIHSTDMDTSR Trigger: CCTGGAGGTGTCCATATCTGTGGAATGTATCAGCCATCCCGTCCTAAGGTGCACCAGTGTCTCTGGGAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR CCA 72 bp | GTCTCATTAGCCTGGAACTCACTAACTCGGTTAGCTTaGCTGACTGGTGAGTCCCAGGGTCTGCCGGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: VSLAWNSLTRLA*LTGESQGLPAS Trigger: TGAAGCCGGCAGACCCTGGGACTCACCAGTCAGCCAAGCTAACCGAGTTAGTGAGTTCCAGGCTAATGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR TCA 72 bp | TCCCAGGGTCTGCCGGCTTCAGCTTCCTCAGTACTTTaGTTACATGTACTGGCCTGGCTCTGTGAGATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SQGLPASASSVL*LHVLAWLCEIW Trigger: CCAGATCTCACAGAGCCAGGCCAGTACATGTAATCAAAGTACTGAGGAAGCTGAAGCCGGCAGACCCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR CCA 72 bp | TTCCTGATCTGCCGATGCATCAGGTCCTTCTTCACCTaGAGAGCCTCGAAGGCAGCCTTCTGCATTACACTC | + |
|
Preference number: 3 (lower is better) Translates to: FLICRCIRSFFT*RASKAAFCITL Trigger: GAGTGTAATGCAGAAGGCTGCCTTCGAGGCTCTCCAGGTGAAGAAGGACCTGATGCATCGGCAGATCAGGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195713.2 |
||
| 3UTR CCA 72 bp | GTTTCGCTCTTGGCCTCTAATTCCGCCAGGATGCCATaGAGTTCCTCTTCCCGCTGCTTCTTCTCTTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: VSLLASNSARMP*SSSSRCFFSFR Trigger: CCTGAAAGAGAAGAAGCAGCGGGAAGAGGAACTCCATGGCATCCTGGCGGAATTAGAGGCCAAGAGCGAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195713.2 |
||
| 3UTR TCA 72 bp | GATCTCTTGGGCTCATCATATGAGCTACCAGGCCCCTaGTCTGAGTGTGTTCCTGCACGTGTGTACAGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: DLLGSSYELPGP*SECVPARVYRY Trigger: GTACCTGTACACACGTGCAGGAACACACTCAGATCAGGGGCCTGGTAGCTCATATGATGAGCCCAAGAGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTAGATTTGCCCTGTCTTTaGTTCACTGTTCAGAATAGC | + |
|
Preference number: 3 (lower is better) Translates to: VLGSLAQPTPSQRHWCTLDLPCL*FTVQNS Trigger: GCTATTCTGAACAGTGAACAAAAGACAGGGCAAATC...TAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR GCA 72 bp | TTTCTTTCCACATTCAATACCTGCAGGACTGTCAGCTaGCCCATGTCATCAGGAAGGGCTGTCAGCTGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: FLSTFNTCRTVS*PMSSGRAVSWF Trigger: GAACCAGCTGACAGCCCTTCCTGATGACATGGGGCAGCTGACAGTCCTGCAGGTATTGAATGTGGAAAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191838.6 |
||
| 3UTR CCA 72 bp | GGACCTAGGGGTGACTCTGCAAGGAGTCAGATTTACTaGTGCTCCTGTTTTGAATCAACCTGCCTGTGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: GPRGDSARSQIY*CSCFESTCLCR Trigger: CCTACACAGGCAGGTTGATTCAAAACAGGAGCACCAGTAAATCTGACTCCTTGCAGAGTCACCCCTAGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR GCA 72 bp | CCTAGGGGTGACTCTGCAAGGAGTCAGATTTACTGGTaGTCCTGTTTTGAATCAACCTGCCTGTGTAGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: PRGDSARSQIYW*SCFESTCLCRL Trigger: TAGCCTACACAGGCAGGTTGATTCAAAACAGGAGCACCAGTAAATCTGACTCCTTGCAGAGTCACCCCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR GCA 72 bp | GTTTCTATTAGCCTAATCTGGTTCCTGATCTGCCGATaGATCAGGTCCTTCTTCACCTGGAGAGCCTCGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VSISLIWFLICR*IRSFFTWRASK Trigger: CTTCGAGGCTCTCCAGGTGAAGAAGGACCTGATGCATCGGCAGATCAGGAACCAGATTAGGCTAATAGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195713.2 |
||
| 3UTR CCA 72 bp | GAATCAACCTGCCTGTGTAGGCTAAGGATGCAGATATaGGAGGGTGGGTGTTCAGAAAGAAGCAAAAGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: ESTCLCRLRMQI*EGGCSERSKRV Trigger: CACCCTTTTGCTTCTTTCTGAACACCCACCCTCCCATATCTGCATCCTTAGCCTACACAGGCAGGTTGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR GCA 72 bp | TGTTCCTGCACGTGTGTACAGGTACAAATTCACATGTaGATGTGGAAGCCAAAGGATCTCGGATCATTCCGC | + |
|
Preference number: 3 (lower is better) Translates to: CSCTCVQVQIHM*MWKPKDLGSFR Trigger: GCGGAATGATCCGAGATCCTTTGGCTTCCACATGCACATGTGAATTTGTACCTGTACACACGTGCAGGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR TCA 72 bp | AAAGGATCTCGGATCATTCCGCCTCGTGTTTTGAGATaGGGTCTCATTAGCCTGGAACTCACTAACTCGGTT | + |
|
Preference number: 3 (lower is better) Translates to: KGSRIIPPRVLR*GLISLELTNSV Trigger: AACCGAGTTAGTGAGTTCCAGGCTAATGAGACCTCATCTCAAAACACGAGGCGGAATGATCCGAGATCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR GCA 72 bp | ATAAACGCTTTATTTAAAGCTCATTTCCTCATGTGCTaGTGGGGTGGGGGAGATCTGGGCCTACCGTATCTA | + |
|
Preference number: 3 (lower is better) Translates to: INALFKAHFLMC*WGGGDLGLPYL Trigger: TAGATACGGTAGGCCCAGATCTCCCCCACCCCAGCAGCACATGAGGAAATGAGCTTTAAATAAAGCGTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR-3UTR CAA 90 bp | TACAAATTCACATGTGCATGTGGAAGCCAAAGGATCTCGGATCATTCCGCCTCGGATTTGCCCTGTCTTTaGTTCACTGTTCAGAATAGC | + |
|
Preference number: 3 (lower is better) Translates to: YKFTCACGSQRISDHSASDLPCL*FTVQNS Trigger: GCTATTCTGAACAGTGAACAAAAGACAGGGCAAATC...CGAGGCGGAATGATCCGAGATCCTTTGGCTTCCACATGCACATGTGAATTTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGTACAAATTCACATGTGCATGTGGAAGCCAAAGGATCTCGGATCATTCCGAGCTTCCTCAGTACTTaGATTACATGTACTGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TGTNSHVHVEAKGSRIIPSFLST*ITCTGL Trigger: CAGGCCAGTACATGTAATCAAAGTACTGAGGAAGCT...CGGAATGATCCGAGATCCTTTGGCTTCCACATGCACATGTGAATTTGTACCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR TCA 72 bp | ACAAAGGCTTCTGGTTTAAAAGCCGTTGGTACTGGATaGGCCAGTAATTTTCCTGCTTCGTTTCGCTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: TKASGLKAVGTG*ASNFPASFRSW Trigger: CCAAGAGCGAAACGAAGCAGGAAAATTACTGGCTCATCCAGTACCAACGGCTTTTAAACCAGAAGCCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195713.2 |
||
| CDS-3UTR GCA 90 bp | AGGAACATTCCACCTGCCTGCCTAGTGCTCAGAGCAGTGGGGGTCGGGGTGGCATCAGCGTGCTCCCGCTaGCCAAGGTCCAGGCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RNIPPACLVLRAVGVGVASACSR*PRSRRR Trigger: GCGGCGCCTGGACCTTGGGCAGCGGGAGCACGCTGA...TGCCACCCCGACCCCCACTGCTCTGAGCACTAGGCAGGCAGGTGGAATGTTCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | AGGAACATTCCACCTGCCTGCCTAGTGCTCAGAGCAGTGGGGGTCGGGGTGGCAGCTCCCGGGGAGCTGTaGGGGGCTCGAGGGCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: RNIPPACLVLRAVGVGVAAPGEL*GARGHQ Trigger: TTGGTGCCCTCGAGCCCCCCACAGCTCCCCGGGAGC...TGCCACCCCGACCCCCACTGCTCTGAGCACTAGGCAGGCAGGTGGAATGTTCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTGAGTCCTGCAGGGCCACCTCCCTACGCTGGACCTTGGCCCCCTGCCCCATCTGCTCCGTCTGCTTaGGCTGCTCCTGCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLSPAGPPPYAGPWPPAPSAPSA*AAPAAA Trigger: AGCAGCTGCAGGAGCAGCTCAAGCAGACGGAGCAGA...TGGGGCAGGGGGCCAAGGTCCAGCGTAGGGAGGTGGCCCTGCAGGACTCAGGAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTGAGTCCTGCAGGGCCACCTCCCTACGCTGGACCTTGGCCCCCTGCCCCATTGCAGGCCTGCTTCTaGGACGCCCACCTTAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLSPAGPPPYAGPWPPAPLQACF*DAHLSQ Trigger: CTGGCTAAGGTGGGCGTCTCAGAAGCAGGCCTGCAA...TGGGGCAGGGGGCCAAGGTCCAGCGTAGGGAGGTGGCCCTGCAGGACTCAGGAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | AGGAACATTCCACCTGCCTGCCTAGTGCTCAGAGCAGTGGGGGTCGGGGTGGCAGCTGCACGGCCGCAGTaGCAGCGCCACACACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RNIPPACLVLRAVGVGVAAARPQ*QRHTPL Trigger: CAGAGGTGTGTGGCGCTGGCACTGCGGCCGTGCAGC...TGCCACCCCGACCCCCACTGCTCTGAGCACTAGGCAGGCAGGTGGAATGTTCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGGGGGTCGGGGTGGCAGGTGGTGGGTGACAAAGGCCTATGGCAGTCTTGCGCATCCAGACAGCGCTaGCGCTCGCTCAGGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QWGSGWQVVGDKGLWQSCASRQR*RSLRSC Trigger: GCAGGACCTGAGCGAGCGCCAGCGCTGTCTGGATGC...GCAAGACTGCCATAGGCCTTTGTCACCCACCACCTGCCACCCCGACCCCCACTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGGGGGTCGGGGTGGCAGGTGGTGGGTGACAAAGGCCTATGGCAGTCTTGCTTGCAGAGGAACTGCTaGACGGCCGCAGTGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QWGSGWQVVGDKGLWQSCLQRNC*TAAVPA Trigger: CGCTGGCACTGCGGCCGTGCAGCAGTTCCTCTGCAA...GCAAGACTGCCATAGGCCTTTGTCACCCACCACCTGCCACCCCGACCCCCACTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGGGGGTCGGGGTGGCAGGTGGTGGGTGACAAAGGCCTATGGCAGTCTTGCTCCAGTGAGATGCGGTaGTGGGCGAAGAGGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QWGSGWQVVGDKGLWQSCSSEMR*WAKRGR Trigger: CCTGCCCCTCTTCGCCCACCACCGCATCTCACTGGA...GCAAGACTGCCATAGGCCTTTGTCACCCACCACCTGCCACCCCGACCCCCACTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | TCACAGGCCAGGAACATTCCACCTGCCTGCCTAGTGCTCAGAGCAGTGGGGGTCCTCCTGGCGGCACAGTaGGCAGGTGCGCAGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQARNIPPACLVLRAVGVLLAAQ*AGAQRL Trigger: CAGCCTCTGCGCACCTGCCCACTGTGCCGCCAGGAG...GACCCCCACTGCTCTGAGCACTAGGCAGGCAGGTGGAATGTTCCTGGCCTGTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGGGGGTCGGGGTGGCAGGTGGTGGGTGACAAAGGCCTATGGCAGTCTTGCTGCTTGAGCTGCTCCTaGAGCTGCTGCCGCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QWGSGWQVVGDKGLWQSCCLSCS*SCCRSA Trigger: TGCAGAGCGGCAGCAGCTGCAGGAGCAGCTCAAGCA...GCAAGACTGCCATAGGCCTTTGTCACCCACCACCTGCCACCCCGACCCCCACTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTGAGTCCTGCAGGGCCACCTCCCTACGCTGGACCTTGGCCCCCTGCCCCATCGTCCTTGTGGCTGTaGCTCTGCTGCAGTAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLSPAGPPPYAGPWPPAPSSLWL*LCCSSS Trigger: TGAGCTACTGCAGCAGAGCCACAGCCACAAGGACGA...TGGGGCAGGGGGCCAAGGTCCAGCGTAGGGAGGTGGCCCTGCAGGACTCAGGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | AGGAACATTCCACCTGCCTGCCTAGTGCTCAGAGCAGTGGGGGTCGGGGTGGCATCCAGTGAGATGCGGTaGTGGGCGAAGAGGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RNIPPACLVLRAVGVGVASSEMR*WAKRGR Trigger: CCTGCCCCTCTTCGCCCACCACCGCATCTCACTGGA...TGCCACCCCGACCCCCACTGCTCTGAGCACTAGGCAGGCAGGTGGAATGTTCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR TCA 90 bp | GTGCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTAGCTGGAGCAGGTTGCTaGGTGCCCAGCGCTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLGSLAQPTPSQRHWCTLAGAGC*VPSAAL Trigger: CAGAGCAGCGCTGGGCACTCAGCAACCTGCTCCAGC...TAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTGAGTCCTGCAGGGCCACCTCCCTACGCTGGACCTTGGCCCCCTGCCCCATTGAGCGTCTGGAGCTaGAGCAGGTTCCCAATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLSPAGPPPYAGPWPPAPLSVWS*SRFPIE Trigger: CTCTATTGGGAACCTGCTGCAGCTCCAGACGCTCAA...TGGGGCAGGGGGCCAAGGTCCAGCGTAGGGAGGTGGCCCTGCAGGACTCAGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTAGGTTGCAGAGGAACTGCTaGACGGCCGCAGTGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: AGESCTTHPFPETLVHLRLQRNC*TAAVPA Trigger: CGCTGGCACTGCGGCCGTGCAGCAGTTCCTCTGCAA...CCTAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTGAGTCCTGCAGGGCCACCTCCCTACGCTGGACCTTGGCCCCCTGCCCCAGTCTTGGGTGTTCTCTaGTCCATCTTGCTCCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FLSPAGPPPYAGPWPPAPVLGVL*SILLQD Trigger: GTCCTGGAGCAAGATGGAGCAGAGAACACCCAAGAC...TGGGGCAGGGGGCCAAGGTCCAGCGTAGGGAGGTGGCCCTGCAGGACTCAGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGGGGGTCGGGGTGGCAGGTGGTGGGTGACAAAGGCCTATGGCAGTCTTGCTTGTGGCTGTGGCTCTaGTGCAGTAGCTCAGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QWGSGWQVVGDKGLWQSCLWLWL*CSSSAC Trigger: GCACGCTGAGCTACTGCAGCAGAGCCACAGCCACAA...GCAAGACTGCCATAGGCCTTTGTCACCCACCACCTGCCACCCCGACCCCCACTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTACAGCTGCTGCCGCTCTaGATCCAGACAGCGCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VLGSLAQPTPSQRHWCTLQLLPL*IQTALA Trigger: CGCCAGCGCTGTCTGGATGCAGAGCGGCAGCAGCTG...TAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | ATGAGGGTAGGTGGGAGTCCAGCAGTGGTGGAGATGGTACCAAGGAAGGGCCAGCAGCTGCTGCCGCTCTaGATCCAGACAGCGCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: MRVGGSPAVVEMVPRKGQQLLPL*IQTALA Trigger: CGCCAGCGCTGTCTGGATGCAGAGCGGCAGCAGCTG...CTGGCCCTTCCTTGGTACCATCTCCACCACTGCTGGACTCCCACCTACCCTCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | CTTAGGACGGGATGGCTGATACATTCCACAGATATGGACACCTCCAGGAGGGGCGCTCCCGGGGAGCTGTaGGGGGCTCGAGGGCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: LRTGWLIHSTDMDTSRRGAPGEL*GARGHQ Trigger: TTGGTGCCCTCGAGCCCCCCACAGCTCCCCGGGAGC...GCCCCTCCTGGAGGTGTCCATATCTGTGGAATGTATCAGCCATCCCGTCCTAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR TCA 90 bp | TCACAGGCCAGGAACATTCCACCTGCCTGCCTAGTGCTCAGAGCAGTGGGGGTCTCTGCTCCGTCTGCTTaGGCTGCTCCTGCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQARNIPPACLVLRAVGVSAPSA*AAPAAA Trigger: AGCAGCTGCAGGAGCAGCTCAAGCAGACGGAGCAGA...GACCCCCACTGCTCTGAGCACTAGGCAGGCAGGTGGAATGTTCCTGGCCTGTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR TCA 90 bp | CAGTGGGGGTCGGGGTGGCAGGTGGTGGGTGACAAAGGCCTATGGCAGTCTTGCCATAGGCCATCTGGATaGGCCGGCTCTTACAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QWGSGWQVVGDKGLWQSCHRPSG*AGSYSS Trigger: AGAGCTGTAAGAGCCGGCTCATCCAGATGGCCTATG...GCAAGACTGCCATAGGCCTTTGTCACCCACCACCTGCCACCCCGACCCCCACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | TATACTGGGGAGGGCAGTAGGGTGCCATGTCACATGGAACCCTTCACTACAGCTTCAGCGTGCTCCCGCTaGCCAAGGTCCAGGCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: YTGEGSRVPCHMEPFTTASACSR*PRSRRR Trigger: GCGGCGCCTGGACCTTGGGCAGCGGGAGCACGCTGA...AGCTGTAGTGAAGGGTTCCATGTGACATGGCACCCTACTGCCCTCCCCAGTATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | TCACAGGCCAGGAACATTCCACCTGCCTGCCTAGTGCTCAGAGCAGTGGGGGTCTGCTCCTGCAGCTGCTaGCGCTCTGCATCCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SQARNIPPACLVLRAVGVCSCSC*RSASRQ Trigger: CTGTCTGGATGCAGAGCGGCAGCAGCTGCAGGAGCA...GACCCCCACTGCTCTGAGCACTAGGCAGGCAGGTGGAATGTTCCTGGCCTGTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTAGGTGCTCCTGCAGCTGCTaGCGCTCTGCATCCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: AGESCTTHPFPETLVHLRCSCSC*RSASRQ Trigger: CTGTCTGGATGCAGAGCGGCAGCAGCTGCAGGAGCA...CCTAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | TCACAGGCCAGGAACATTCCACCTGCCTGCCTAGTGCTCAGAGCAGTGGGGGTCGCGGCGATCTCACGCTaGCTGAGGTTCTCTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQARNIPPACLVLRAVGVAAISR*LRFSVS Trigger: GGAGACAGAGAACCTCAGGCAGCGTGAGATCGCCGC...GACCCCCACTGCTCTGAGCACTAGGCAGGCAGGTGGAATGTTCCTGGCCTGTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTGAGTCCTGCAGGGCCACCTCCCTACGCTGGACCTTGGCCCCCTGCCCCAATCTGGTTCCTGATCTaGCGATGCATCAGGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLSPAGPPPYAGPWPPAPIWFLI*RCIRSF Trigger: GAAGGACCTGATGCATCGGCAGATCAGGAACCAGAT...TGGGGCAGGGGGCCAAGGTCCAGCGTAGGGAGGTGGCCCTGCAGGACTCAGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | AGGAACATTCCACCTGCCTGCCTAGTGCTCAGAGCAGTGGGGGTCGGGGTGGCAGGGCAGGTAGTGCTCTaGAGAAAGCTCCACCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RNIPPACLVLRAVGVGVAGQVVL*RKLHQQ Trigger: CTGCTGGTGGAGCTTTCTGCAGAGCACTACCTGCCC...TGCCACCCCGACCCCCACTGCTCTGAGCACTAGGCAGGCAGGTGGAATGTTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | AGGAACATTCCACCTGCCTGCCTAGTGCTCAGAGCAGTGGGGGTCGGGGTGGCAATTCAGCCTCCTCCCTaGAGAATCGGCTTGCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RNIPPACLVLRAVGVGVAIQPPP*RIGLRV Trigger: GACCCGCAAGCCGATTCTCCAGGGAGGAGGCTGAAT...TGCCACCCCGACCCCCACTGCTCTGAGCACTAGGCAGGCAGGTGGAATGTTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | TCATTCGGCTCAGCATGTCCAGTGAGATGCGGTGGTGGGCGAAGAGGGGCAGGTTCAGCATCTGCTGCATaGCGGCGGCGATCTCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFGSACPVRCGGGRRGAGSASAA*RRRSHA Trigger: AGCGTGAGATCGCCGCCGCCATGCAGCAGATGCTGA...ACCTGCCCCTCTTCGCCCACCACCGCATCTCACTGGACATGCTGAGCCGAATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195713.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGGGGGTCGGGGTGGCAGGTGGTGGGTGACAAAGGCCTATGGCAGTCTTGCTCTTTCAGGAGCTGCTaGAGCAGGTTGCTGAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QWGSGWQVVGDKGLWQSCSFRSC*SRLLSA Trigger: GGCACTCAGCAACCTGCTCCAGCAGCTCCTGAAAGA...GCAAGACTGCCATAGGCCTTTGTCACCCACCACCTGCCACCCCGACCCCCACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR TCA 90 bp | GTGCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTATGCCCAGCGCTGCTCTaGGACCATCTCCTGAAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VLGSLAQPTPSQRHWCTLCPALL*DHLLKR Trigger: ACGCTTCAGGAGATGGTCTCAGAGCAGCGCTGGGCA...TAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | GTTGCCTCAGCAGCCCCCTCACCTAGGATAATCATTGCAGGAACACAACCTGTCGCTGCACGGCCGCAGTaGCAGCGCCACACACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VASAAPSPRIIIAGTQPVAARPQ*QRHTPL Trigger: CAGAGGTGTGTGGCGCTGGCACTGCGGCCGTGCAGC...GACAGGTTGTGTTCCTGCAATGATTATCCTAGGTGAGGGGGCTGCTGAGGCAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | TCACAGGCCAGGAACATTCCACCTGCCTGCCTAGTGCTCAGAGCAGTGGGGGTCTCTTTGCAGAGGAACTaGTGCACGGCCGCAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQARNIPPACLVLRAVGVSLQRN*CTAAVP Trigger: TGGCACTGCGGCCGTGCAGCAGTTCCTCTGCAAAGA...GACCCCCACTGCTCTGAGCACTAGGCAGGCAGGTGGAATGTTCCTGGCCTGTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTATGCTTGAGCTGCTCCTaGAGCTGCTGCCGCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VLGSLAQPTPSQRHWCTLCLSCS*SCCRSA Trigger: TGCAGAGCGGCAGCAGCTGCAGGAGCAGCTCAAGCA...TAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | TCACAGGCCAGGAACATTCCACCTGCCTGCCTAGTGCTCAGAGCAGTGGGGGTCGCAGGAGTCTCTGAATaGGGCTGGCGATGCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQARNIPPACLVLRAVGVAGVSE*GWRCSA Trigger: AGCAGAGCATCGCCAGCCGCATTCAGAGACTCCTGC...GACCCCCACTGCTCTGAGCACTAGGCAGGCAGGTGGAATGTTCCTGGCCTGTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTGAGTCCTGCAGGGCCACCTCCCTACGCTGGACCTTGGCCCCCTGCCCCATCAGAACTCTTCTTTTaGCTCTGGTTGTCCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLSPAGPPPYAGPWPPAPSELFF*LWLSCR Trigger: CCTGCAGGACAACCAGAGGCAAAAGAAGAGTTCTGA...TGGGGCAGGGGGCCAAGGTCCAGCGTAGGGAGGTGGCCCTGCAGGACTCAGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTAGCGGCGATCTCACGCTaGCTGAGGTTCTCTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLGSLAQPTPSQRHWCTLAAISR*LRFSVS Trigger: GGAGACAGAGAACCTCAGGCAGCGTGAGATCGCCGC...TAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | AATGAGGGTAGGTGGGAGTCCAGCAGTGGTGGAGATGGTACCAAGGAAGGGCCACTCTCCGTCAGCATCTaGTGCATGGCGGCGGCGATC | + |
|
Preference number: 4 (lower is better) Translates to: NEGRWESSSGGDGTKEGPLSVSI*CMAAAI Trigger: GATCGCCGCCGCCATGCAGCAGATGCTGACGGAGAG...TGGCCCTTCCTTGGTACCATCTCCACCACTGCTGGACTCCCACCTACCCTCATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGGGGGTCGGGGTGGCAGGTGGTGGGTGACAAAGGCCTATGGCAGTCTTGCTTCGAGCCTCCTCACTaGGTTTCCGCTTCCGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QWGSGWQVVGDKGLWQSCFEPPH*VSASER Trigger: TCTTTCGGAAGCGGAAACCCAGTGAGGAGGCTCGAA...GCAAGACTGCCATAGGCCTTTGTCACCCACCACCTGCCACCCCGACCCCCACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTGAGTCCTGCAGGGCCACCTCCCTACGCTGGACCTTGGCCCCCTGCCCCAGTCAGCTGGTTCTCATaGAGATCCAGAACCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: FLSPAGPPPYAGPWPPAPVSWFS*RSRTLM Trigger: CATCAAGGTTCTGGATCTCCATGAGAACCAGCTGAC...TGGGGCAGGGGGCCAAGGTCCAGCGTAGGGAGGTGGCCCTGCAGGACTCAGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTAGGAGGTCCTTCTTCACCTaGAGAGCCTCGAAGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGESCTTHPFPETLVHLRRSFFT*RASKAA Trigger: GGCTGCCTTCGAGGCTCTCCAGGTGAAGAAGGACCT...CCTAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | AATGAGGGTAGGTGGGAGTCCAGCAGTGGTGGAGATGGTACCAAGGAAGGGCCAGGTCGCACTGACTCTTaGAGCTCCCGGGGAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NEGRWESSSGGDGTKEGPGRTDS*SSRGAV Trigger: CACAGCTCCCCGGGAGCTCCAAGAGTCAGTGCGACC...TGGCCCTTCCTTGGTACCATCTCCACCACTGCTGGACTCCCACCTACCCTCATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | TATACTGGGGAGGGCAGTAGGGTGCCATGTCACATGGAACCCTTCACTACAGCTCTCCTGGCGGCACAGTaGGCAGGTGCGCAGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YTGEGSRVPCHMEPFTTALLAAQ*AGAQRL Trigger: CAGCCTCTGCGCACCTGCCCACTGTGCCGCCAGGAG...AGCTGTAGTGAAGGGTTCCATGTGACATGGCACCCTACTGCCCTCCCCAGTATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR TCA 90 bp | GTGCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTAGTGTCTGCTCCTGCTTaGCCGTCTGCAGGATCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: VLGSLAQPTPSQRHWCTLVSAPA*PSAGSR Trigger: ACGAGATCCTGCAGACGGTCAAGCAGGAGCAGACAC...TAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR TCA 90 bp | GTGCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTACGATCTCACGCTGCCTaGGGTTCTCTGTCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLGSLAQPTPSQRHWCTLRSHAA*GSLSPP Trigger: AGGAGGAGACAGAGAACCTCAGGCAGCGTGAGATCG...TAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | TCACAGGCCAGGAACATTCCACCTGCCTGCCTAGTGCTCAGAGCAGTGGGGGTCTTCTCTGCTCCATCTTaGTCCAGGACTGGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SQARNIPPACLVLRAVGVFSAPS*SRTGSR Trigger: CCTGCTGCCAGTCCTGGAGCAAGATGGAGCAGAGAA...GACCCCCACTGCTCTGAGCACTAGGCAGGCAGGTGGAATGTTCCTGGCCTGTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | AGGAACATTCCACCTGCCTGCCTAGTGCTCAGAGCAGTGGGGGTCGGGGTGGCACTAATTCCGCCAGGATaGCATGGAGTTCCTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RNIPPACLVLRAVGVGVALIPPG*HGVPLP Trigger: GGGAAGAGGAACTCCATGGCATCCTGGCGGAATTAG...TGCCACCCCGACCCCCACTGCTCTGAGCACTAGGCAGGCAGGTGGAATGTTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | GTGCACCTTAGGACGGGATGGCTGATACATTCCACAGATATGGACACCTCCAGGGCATCCAGACAGCGCTaGCGCTCGCTCAGGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VHLRTGWLIHSTDMDTSRASRQR*RSLRSC Trigger: GCAGGACCTGAGCGAGCGCCAGCGCTGTCTGGATGC...CCTGGAGGTGTCCATATCTGTGGAATGTATCAGCCATCCCGTCCTAAGGTGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | AATGAGGGTAGGTGGGAGTCCAGCAGTGGTGGAGATGGTACCAAGGAAGGGCCATCAGCATCTGCTGCATaGCGGCGGCGATCTCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: NEGRWESSSGGDGTKEGPSASAA*RRRSHA Trigger: AGCGTGAGATCGCCGCCGCCATGCAGCAGATGCTGA...TGGCCCTTCCTTGGTACCATCTCCACCACTGCTGGACTCCCACCTACCCTCATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTGAGTCCTGCAGGGCCACCTCCCTACGCTGGACCTTGGCCCCCTGCCCCAGGGAGATGCGTGAGTTaGTTTCTTTCCACATTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: FLSPAGPPPYAGPWPPAPGRCVS*FLSTFN Trigger: ATTGAATGTGGAAAGAAATCAACTCACGCATCTCCC...TGGGGCAGGGGGCCAAGGTCCAGCGTAGGGAGGTGGCCCTGCAGGACTCAGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGGGTAGGTGGGAGTCCAGCAGTGGTGGAGATGGTACCAAGGAAGGGCCAGCTGTCTCCTCCTGGGTaGTGGACATCAACTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MRVGGSPAVVEMVPRKGQLSPPG*WTSTAP Trigger: TGGAGCAGTTGATGTCCATCACCCAGGAGGAGACAG...CTGGCCCTTCCTTGGTACCATCTCCACCACTGCTGGACTCCCACCTACCCTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | AATGAGGGTAGGTGGGAGTCCAGCAGTGGTGGAGATGGTACCAAGGAAGGGCCATCTTTGCAGAGGAACTaGTGCACGGCCGCAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NEGRWESSSGGDGTKEGPSLQRN*CTAAVP Trigger: TGGCACTGCGGCCGTGCAGCAGTTCCTCTGCAAAGA...TGGCCCTTCCTTGGTACCATCTCCACCACTGCTGGACTCCCACCTACCCTCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | AATGAGGGTAGGTGGGAGTCCAGCAGTGGTGGAGATGGTACCAAGGAAGGGCCAGCAGGAGTCTCTGAATaGGGCTGGCGATGCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NEGRWESSSGGDGTKEGPAGVSE*GWRCSA Trigger: AGCAGAGCATCGCCAGCCGCATTCAGAGACTCCTGC...TGGCCCTTCCTTGGTACCATCTCCACCACTGCTGGACTCCCACCTACCCTCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTACCAGCCGTCGCTCCATaGCTTCTTCCTGCAGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLGSLAQPTPSQRHWCTLPAVAP*LLPAVS Trigger: TGAAACTGCAGGAAGAAGGCATGGAGCGACGGCTGG...TAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | GTGCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTATCGTCCTTGTGGCTGTaGCTCTGCTGCAGTAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLGSLAQPTPSQRHWCTLSSLWL*LCCSSS Trigger: TGAGCTACTGCAGCAGAGCCACAGCCACAAGGACGA...TAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | AATGAGGGTAGGTGGGAGTCCAGCAGTGGTGGAGATGGTACCAAGGAAGGGCCAAGGTCCTTCTTCACCTaGAGAGCCTCGAAGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NEGRWESSSGGDGTKEGPRSFFT*RASKAA Trigger: GGCTGCCTTCGAGGCTCTCCAGGTGAAGAAGGACCT...TGGCCCTTCCTTGGTACCATCTCCACCACTGCTGGACTCCCACCTACCCTCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTGAGTCCTGCAGGGCCACCTCCCTACGCTGGACCTTGGCCCCCTGCCCCAAAGGACAAAGGCTTCTaGTTTAAAAGCCGTTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: FLSPAGPPPYAGPWPPAPKDKGF*FKSRWY Trigger: GTACCAACGGCTTTTAAACCAGAAGCCTTTGTCCTT...TGGGGCAGGGGGCCAAGGTCCAGCGTAGGGAGGTGGCCCTGCAGGACTCAGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGGGTAGGTGGGAGTCCAGCAGTGGTGGAGATGGTACCAAGGAAGGGCCAGGGTTTCAACTCTGGCTaGACCCTAGGCACAGCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: MRVGGSPAVVEMVPRKGQGFNSG*TLGTAS Trigger: GCTAGCTGTGCCTAGGGTCCAGCCAGAGTTGAAACC...CTGGCCCTTCCTTGGTACCATCTCCACCACTGCTGGACTCCCACCTACCCTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR TCA 90 bp | TATACTGGGGAGGGCAGTAGGGTGCCATGTCACATGGAACCCTTCACTACAGCTTGCCCAGCGCTGCTCTaGGACCATCTCCTGAAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: YTGEGSRVPCHMEPFTTACPALL*DHLLKR Trigger: ACGCTTCAGGAGATGGTCTCAGAGCAGCGCTGGGCA...AGCTGTAGTGAAGGGTTCCATGTGACATGGCACCCTACTGCCCTCCCCAGTATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | TCACAGGCCAGGAACATTCCACCTGCCTGCCTAGTGCTCAGAGCAGTGGGGGTCGTCGAGAATGTCATCTaGCCCAGCTTCTTTTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQARNIPPACLVLRAVGVVENVI*PSFFCQ Trigger: CTGGCAAAAGAAGCTGGGGCAGATGACATTCTCGAC...GACCCCCACTGCTCTGAGCACTAGGCAGGCAGGTGGAATGTTCCTGGCCTGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTATTGAGCGTCTGGAGCTaGAGCAGGTTCCCAATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLGSLAQPTPSQRHWCTLLSVWS*SRFPIE Trigger: CTCTATTGGGAACCTGCTGCAGCTCCAGACGCTCAA...TAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | AGACCATCTCCTGAAGCGTCTCTGTGTCCAGGGACTTCCTCTTTAACTCCAGCTCTCTCCGTCAGCATCTaGTGCATGGCGGCGGCGATC | + |
|
Preference number: 4 (lower is better) Translates to: RPSPEASLCPGTSSLTPALSVSI*CMAAAI Trigger: GATCGCCGCCGCCATGCAGCAGATGCTGACGGAGAG...AGCTGGAGTTAAAGAGGAAGTCCCTGGACACAGAGACGCTTCAGGAGATGGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195713.2 |
||
| CDS-3UTR GCA 90 bp | ATGAGGGTAGGTGGGAGTCCAGCAGTGGTGGAGATGGTACCAAGGAAGGGCCAGCTAATTCCGCCAGGATaGCATGGAGTTCCTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: MRVGGSPAVVEMVPRKGQLIPPG*HGVPLP Trigger: GGGAAGAGGAACTCCATGGCATCCTGGCGGAATTAG...CTGGCCCTTCCTTGGTACCATCTCCACCACTGCTGGACTCCCACCTACCCTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | AATGAGGGTAGGTGGGAGTCCAGCAGTGGTGGAGATGGTACCAAGGAAGGGCCACCAGCCGTCGCTCCATaGCTTCTTCCTGCAGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NEGRWESSSGGDGTKEGPPAVAP*LLPAVS Trigger: TGAAACTGCAGGAAGAAGGCATGGAGCGACGGCTGG...TGGCCCTTCCTTGGTACCATCTCCACCACTGCTGGACTCCCACCTACCCTCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | TATACTGGGGAGGGCAGTAGGGTGCCATGTCACATGGAACCCTTCACTACAGCTGCATGTCCAGTGAGATaGGGTGGTGGGCGAAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YTGEGSRVPCHMEPFTTAACPVR*GGGRRG Trigger: CCCTCTTCGCCCACCACCGCATCTCACTGGACATGC...AGCTGTAGTGAAGGGTTCCATGTGACATGGCACCCTACTGCCCTCCCCAGTATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTACGTAGGATCTCATGTTaGAGGCCTGCTTCTGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: VLGSLAQPTPSQRHWCTLRRISC*RPASET Trigger: CGTCTCAGAAGCAGGCCTGCAACATGAGATCCTACG...TAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | AGGAACATTCCACCTGCCTGCCTAGTGCTCAGAGCAGTGGGGGTCGGGGTGGCAGTCAGCTGGTTCTCATaGAGATCCAGAACCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RNIPPACLVLRAVGVGVAVSWFS*RSRTLM Trigger: CATCAAGGTTCTGGATCTCCATGAGAACCAGCTGAC...TGCCACCCCGACCCCCACTGCTCTGAGCACTAGGCAGGCAGGTGGAATGTTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTAGGCTCTTCTTTTGCCTCTaGTTGTCCTGCAGGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AGESCTTHPFPETLVHLRLFFCL*LSCRSL Trigger: GAGACTCCTGCAGGACAACCAGAGGCAAAAGAAGAG...CCTAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | AATGAGGGTAGGTGGGAGTCCAGCAGTGGTGGAGATGGTACCAAGGAAGGGCCAGGTTTCAACTCTGGCTaGACCCTAGGCACAGCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: NEGRWESSSGGDGTKEGPGFNSG*TLGTAS Trigger: GCTAGCTGTGCCTAGGGTCCAGCCAGAGTTGAAACC...TGGCCCTTCCTTGGTACCATCTCCACCACTGCTGGACTCCCACCTACCCTCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR TCA 90 bp | CACCAGCCGTCGCTCCATGCCTTCTTCCTGCAGTTTCAAGGACAAAGGCTTCTGCATAGGCCATCTGGATaGGCCGGCTCTTACAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HQPSLHAFFLQFQGQRLLHRPSG*AGSYSS Trigger: AGAGCTGTAAGAGCCGGCTCATCCAGATGGCCTATG...CAGAAGCCTTTGTCCTTGAAACTGCAGGAAGAAGGCATGGAGCGACGGCTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195713.2 |
||
| CDS-3UTR TCA 90 bp | ATGAGGGTAGGTGGGAGTCCAGCAGTGGTGGAGATGGTACCAAGGAAGGGCCAGCCTGAAGGATCTGGCTaGTGGCTTTGTTCTGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: MRVGGSPAVVEMVPRKGQPEGSG*WLCSDP Trigger: TGGATCAGAACAAAGCCATCAGCCAGATCCTTCAGG...CTGGCCCTTCCTTGGTACCATCTCCACCACTGCTGGACTCCCACCTACCCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR TCA 90 bp | GTGCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTATGCATTACACTCTCCTaGAGGATCTGGCTGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLGSLAQPTPSQRHWCTLCITLS*RIWLMA Trigger: AGCCATCAGCCAGATCCTTCAGGAGAGTGTAATGCA...TAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR TCA 90 bp | TACAAATTCACATGTGCATGTGGAAGCCAAAGGATCTCGGATCATTCCGCCTCGGCTGGAGCAGGTTGCTaGGTGCCCAGCGCTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YKFTCACGSQRISDHSASAGAGC*VPSAAL Trigger: CAGAGCAGCGCTGGGCACTCAGCAACCTGCTCCAGC...CGAGGCGGAATGATCCGAGATCCTTTGGCTTCCACATGCACATGTGAATTTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR TCA 90 bp | GTGCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTAGCCGTTGGTACTGGATaGGCCAGTAATTTTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLGSLAQPTPSQRHWCTLAVGTG*ASNFPA Trigger: AGCAGGAAAATTACTGGCTCATCCAGTACCAACGGC...TAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGGGTAGGTGGGAGTCCAGCAGTGGTGGAGATGGTACCAAGGAAGGGCCAGGCCGTTGGTACTGGATaGGCCAGTAATTTTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MRVGGSPAVVEMVPRKGQAVGTG*ASNFPA Trigger: AGCAGGAAAATTACTGGCTCATCCAGTACCAACGGC...CTGGCCCTTCCTTGGTACCATCTCCACCACTGCTGGACTCCCACCTACCCTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | ATGAGGGTAGGTGGGAGTCCAGCAGTGGTGGAGATGGTACCAAGGAAGGGCCAGTGCCCCAGCTTCTTTTaGCAGACACATCTGGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: MRVGGSPAVVEMVPRKGQCPSFF*QTHLVL Trigger: GAGTACCAGATGTGTCTGGCAAAAGAAGCTGGGGCA...CTGGCCCTTCCTTGGTACCATCTCCACCACTGCTGGACTCCCACCTACCCTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | ATGAGGGTAGGTGGGAGTCCAGCAGTGGTGGAGATGGTACCAAGGAAGGGCCAGGTCGAGAATGTCATCTaGCCCAGCTTCTTTTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MRVGGSPAVVEMVPRKGQVENVI*PSFFCQ Trigger: CTGGCAAAAGAAGCTGGGGCAGATGACATTCTCGAC...CTGGCCCTTCCTTGGTACCATCTCCACCACTGCTGGACTCCCACCTACCCTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | GTGCACCTTAGGACGGGATGGCTGATACATTCCACAGATATGGACACCTCCAGGTTGTGGCTGTGGCTCTaGTGCAGTAGCTCAGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VHLRTGWLIHSTDMDTSRLWLWL*CSSSAC Trigger: GCACGCTGAGCTACTGCAGCAGAGCCACAGCCACAA...CCTGGAGGTGTCCATATCTGTGGAATGTATCAGCCATCCCGTCCTAAGGTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | AATGAGGGTAGGTGGGAGTCCAGCAGTGGTGGAGATGGTACCAAGGAAGGGCCACGTAGGATCTCATGTTaGAGGCCTGCTTCTGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: NEGRWESSSGGDGTKEGPRRISC*RPASET Trigger: CGTCTCAGAAGCAGGCCTGCAACATGAGATCCTACG...TGGCCCTTCCTTGGTACCATCTCCACCACTGCTGGACTCCCACCTACCCTCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | GTGCACCTTAGGACGGGATGGCTGATACATTCCACAGATATGGACACCTCCAGGATTCAGCCTCCTCCCTaGAGAATCGGCTTGCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VHLRTGWLIHSTDMDTSRIQPPP*RIGLRV Trigger: GACCCGCAAGCCGATTCTCCAGGGAGGAGGCTGAAT...CCTGGAGGTGTCCATATCTGTGGAATGTATCAGCCATCCCGTCCTAAGGTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGGGTAGGTGGGAGTCCAGCAGTGGTGGAGATGGTACCAAGGAAGGGCCAGTTCTCTGTCTCCTCCTaGGTGATGGACATCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: MRVGGSPAVVEMVPRKGQFSVSS*VMDINC Trigger: GCAGTTGATGTCCATCACCCAGGAGGAGACAGAGAA...CTGGCCCTTCCTTGGTACCATCTCCACCACTGCTGGACTCCCACCTACCCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | GTGCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTATTCTCTGTCTCCTCCTaGGTGATGGACATCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLGSLAQPTPSQRHWCTLFSVSS*VMDINC Trigger: GCAGTTGATGTCCATCACCCAGGAGGAGACAGAGAA...TAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | GTTGCCTCAGCAGCCCCCTCACCTAGGATAATCATTGCAGGAACACAACCTGTCCCATTTCAGCCATGCTaGAACAGGCCTGCTGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VASAAPSPRIIIAGTQPVPFQPC*NRPAAP Trigger: TGGCGCAGCAGGCCTGTTCCAGCATGGCTGAAATGG...GACAGGTTGTGTTCCTGCAATGATTATCCTAGGTGAGGGGGCTGCTGAGGCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | CTTAGGACGGGATGGCTGATACATTCCACAGATATGGACACCTCCAGGAGGGGCTCTTTCAGGAGCTGCTaGAGCAGGTTGCTGAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRTGWLIHSTDMDTSRRGSFRSC*SRLLSA Trigger: GGCACTCAGCAACCTGCTCCAGCAGCTCCTGAAAGA...GCCCCTCCTGGAGGTGTCCATATCTGTGGAATGTATCAGCCATCCCGTCCTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTCTCATTAGCCTGGAACTCACTAACTCGGTTAGCTTGGCTGACTGGTGAGGTGTCTGCTCCTGCTTaGCCGTCTGCAGGATCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: EVSLAWNSLTRLAWLTGEVSAPA*PSAGSR Trigger: ACGAGATCCTGCAGACGGTCAAGCAGGAGCAGACAC...CTCACCAGTCAGCCAAGCTAACCGAGTTAGTGAGTTCCAGGCTAATGAGACCTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR TCA 90 bp | AATGAGGGTAGGTGGGAGTCCAGCAGTGGTGGAGATGGTACCAAGGAAGGGCCACCTGAAGGATCTGGCTaGTGGCTTTGTTCTGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: NEGRWESSSGGDGTKEGPPEGSG*WLCSDP Trigger: TGGATCAGAACAAAGCCATCAGCCAGATCCTTCAGG...TGGCCCTTCCTTGGTACCATCTCCACCACTGCTGGACTCCCACCTACCCTCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | ATACCTGCAGGACTGTCAGCTGCCCCATGTCATCAGGAAGGGCTGTCAGCTGGTTGCCCCAGCTTCTTTTaGCAGACACATCTGGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: IPAGLSAAPCHQEGLSAGCPSFF*QTHLVL Trigger: GAGTACCAGATGTGTCTGGCAAAAGAAGCTGGGGCA...ACCAGCTGACAGCCCTTCCTGATGACATGGGGCAGCTGACAGTCCTGCAGGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000191838.6 |
||
| CDS-3UTR GCA 90 bp | TACAAATTCACATGTGCATGTGGAAGCCAAAGGATCTCGGATCATTCCGCCTCGTCCAGGGTCCGCACGTaGGCCAGCATCTGGGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: YKFTCACGSQRISDHSASSRVRT*ASIWGS Trigger: ACTTCCCCAGATGCTGGCGCACGTGCGGACCCTGGA...CGAGGCGGAATGATCCGAGATCCTTTGGCTTCCACATGCACATGTGAATTTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | TATACTGGGGAGGGCAGTAGGGTGCCATGTCACATGGAACCCTTCACTACAGCTTTCTCTGCTCCATCTTaGTCCAGGACTGGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YTGEGSRVPCHMEPFTTAFSAPS*SRTGSR Trigger: CCTGCTGCCAGTCCTGGAGCAAGATGGAGCAGAGAA...AGCTGTAGTGAAGGGTTCCATGTGACATGGCACCCTACTGCCCTCCCCAGTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | CTTAGGACGGGATGGCTGATACATTCCACAGATATGGACACCTCCAGGAGGGGCGTCTTGGGTGTTCTCTaGTCCATCTTGCTCCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LRTGWLIHSTDMDTSRRGVLGVL*SILLQD Trigger: GTCCTGGAGCAAGATGGAGCAGAGAACACCCAAGAC...GCCCCTCCTGGAGGTGTCCATATCTGTGGAATGTATCAGCCATCCCGTCCTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | GTTGCCTCAGCAGCCCCCTCACCTAGGATAATCATTGCAGGAACACAACCTGTCTCCTGCTTGACCGTCTaGAGGATCTCGTCCTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VASAAPSPRIIIAGTQPVSCLTV*RISSLW Trigger: CCACAAGGACGAGATCCTGCAGACGGTCAAGCAGGA...GACAGGTTGTGTTCCTGCAATGATTATCCTAGGTGAGGGGGCTGCTGAGGCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | AATGAGGGTAGGTGGGAGTCCAGCAGTGGTGGAGATGGTACCAAGGAAGGGCCATTCCTGATCTGCCGATaGATCAGGTCCTTCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: NEGRWESSSGGDGTKEGPFLICR*IRSFFT Trigger: GGTGAAGAAGGACCTGATGCATCGGCAGATCAGGAA...TGGCCCTTCCTTGGTACCATCTCCACCACTGCTGGACTCCCACCTACCCTCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | CTTAGGACGGGATGGCTGATACATTCCACAGATATGGACACCTCCAGGAGGGGCTTCGAGCCTCCTCACTaGGTTTCCGCTTCCGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRTGWLIHSTDMDTSRRGFEPPH*VSASER Trigger: TCTTTCGGAAGCGGAAACCCAGTGAGGAGGCTCGAA...GCCCCTCCTGGAGGTGTCCATATCTGTGGAATGTATCAGCCATCCCGTCCTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTAGGTGCAAAAGCCCCAAATaGAATCTCAGAGAGCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: AGESCTTHPFPETLVHLRCKSPK*NLRELT Trigger: TGTGAGCTCTCTGAGATTCCATTTGGGGCTTTTGCA...CCTAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTCTCATTAGCCTGGAACTCACTAACTCGGTTAGCTTGGCTGACTGGTGAGCCATTTCAGCCATGCTaGAACAGGCCTGCTGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EVSLAWNSLTRLAWLTGEPFQPC*NRPAAP Trigger: TGGCGCAGCAGGCCTGTTCCAGCATGGCTGAAATGG...CTCACCAGTCAGCCAAGCTAACCGAGTTAGTGAGTTCCAGGCTAATGAGACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | GTGCACCTTAGGACGGGATGGCTGATACATTCCACAGATATGGACACCTCCAGGGAGTGGTTTCAACTCTaGCTGGACCCTAGGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: VHLRTGWLIHSTDMDTSREWFQL*LDPRHS Trigger: GCTGTGCCTAGGGTCCAGCCAGAGTTGAAACCACTC...CCTGGAGGTGTCCATATCTGTGGAATGTATCAGCCATCCCGTCCTAAGGTGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | TATACTGGGGAGGGCAGTAGGGTGCCATGTCACATGGAACCCTTCACTACAGCTGAGTGGTTTCAACTCTaGCTGGACCCTAGGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: YTGEGSRVPCHMEPFTTAEWFQL*LDPRHS Trigger: GCTGTGCCTAGGGTCCAGCCAGAGTTGAAACCACTC...AGCTGTAGTGAAGGGTTCCATGTGACATGGCACCCTACTGCCCTCCCCAGTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | TACAAATTCACATGTGCATGTGGAAGCCAAAGGATCTCGGATCATTCCGCCTCGGGTCGCACTGACTCTTaGAGCTCCCGGGGAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: YKFTCACGSQRISDHSASGRTDS*SSRGAV Trigger: CACAGCTCCCCGGGAGCTCCAAGAGTCAGTGCGACC...CGAGGCGGAATGATCCGAGATCCTTTGGCTTCCACATGCACATGTGAATTTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR TCA 90 bp | AATGAGGGTAGGTGGGAGTCCAGCAGTGGTGGAGATGGTACCAAGGAAGGGCCAGTAATAGTCCAGTCCTaGCTCTTTGCAGAGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: NEGRWESSSGGDGTKEGPVIVQS*LFAEEL Trigger: CAGTTCCTCTGCAAAGAGTCAGGACTGGACTATTAC...TGGCCCTTCCTTGGTACCATCTCCACCACTGCTGGACTCCCACCTACCCTCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR TCA 90 bp | TACAAATTCACATGTGCATGTGGAAGCCAAAGGATCTCGGATCATTCCGCCTCGTTGCAGGCCTGCTTCTaGGACGCCCACCTTAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YKFTCACGSQRISDHSASLQACF*DAHLSQ Trigger: CTGGCTAAGGTGGGCGTCTCAGAAGCAGGCCTGCAA...CGAGGCGGAATGATCCGAGATCCTTTGGCTTCCACATGCACATGTGAATTTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | AGGAACATTCCACCTGCCTGCCTAGTGCTCAGAGCAGTGGGGGTCGGGGTGGCAGTGATGGACATCAACTaGTCCATTCTTATTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RNIPPACLVLRAVGVGVAVMDIN*SILILS Trigger: TGAGAGAATAAGAATGGAGCAGTTGATGTCCATCAC...TGCCACCCCGACCCCCACTGCTCTGAGCACTAGGCAGGCAGGTGGAATGTTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGTACAAATTCACATGTGCATGTGGAAGCCAAAGGATCTCGGATCATTCCGCTCTCCGTCAGCATCTaGTGCATGGCGGCGGCGATC | + |
|
Preference number: 4 (lower is better) Translates to: TGTNSHVHVEAKGSRIIPLSVSI*CMAAAI Trigger: GATCGCCGCCGCCATGCAGCAGATGCTGACGGAGAG...CGGAATGATCCGAGATCCTTTGGCTTCCACATGCACATGTGAATTTGTACCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | TACAAATTCACATGTGCATGTGGAAGCCAAAGGATCTCGGATCATTCCGCCTCGGCATGTCCAGTGAGATaGGGTGGTGGGCGAAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YKFTCACGSQRISDHSASACPVR*GGGRRG Trigger: CCCTCTTCGCCCACCACCGCATCTCACTGGACATGC...CGAGGCGGAATGATCCGAGATCCTTTGGCTTCCACATGCACATGTGAATTTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | TCAGTTTCTATTAGCCTAATCTGGTTCCTGATCTGCCGATGCATCAGGTCCTTCTACCTGGAACAGGCCTaGTGCGCCAGGCTCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVSISLIWFLICRCIRSFYLEQA*CARLCL Trigger: GAGGCAGAGCCTGGCGCAGCAGGCCTGTTCCAGGTA...GAAGGACCTGATGCATCGGCAGATCAGGAACCAGATTAGGCTAATAGAAACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195713.2 |
||
| CDS-3UTR CCA 90 bp | TACAAATTCACATGTGCATGTGGAAGCCAAAGGATCTCGGATCATTCCGCCTCGTCAGCATCTGCTGCATaGCGGCGGCGATCTCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: YKFTCACGSQRISDHSASSASAA*RRRSHA Trigger: AGCGTGAGATCGCCGCCGCCATGCAGCAGATGCTGA...CGAGGCGGAATGATCCGAGATCCTTTGGCTTCCACATGCACATGTGAATTTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | TATACTGGGGAGGGCAGTAGGGTGCCATGTCACATGGAACCCTTCACTACAGCTTGCCCCAGCTTCTTTTaGCAGACACATCTGGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: YTGEGSRVPCHMEPFTTACPSFF*QTHLVL Trigger: GAGTACCAGATGTGTCTGGCAAAAGAAGCTGGGGCA...AGCTGTAGTGAAGGGTTCCATGTGACATGGCACCCTACTGCCCTCCCCAGTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | TCACAGGCCAGGAACATTCCACCTGCCTGCCTAGTGCTCAGAGCAGTGGGGGTCGTGATGGACATCAACTaGTCCATTCTTATTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SQARNIPPACLVLRAVGVVMDIN*SILILS Trigger: TGAGAGAATAAGAATGGAGCAGTTGATGTCCATCAC...GACCCCCACTGCTCTGAGCACTAGGCAGGCAGGTGGAATGTTCCTGGCCTGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | GTGCACCTTAGGACGGGATGGCTGATACATTCCACAGATATGGACACCTCCAGGTTCCTGATCTGCCGATaGATCAGGTCCTTCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: VHLRTGWLIHSTDMDTSRFLICR*IRSFFT Trigger: GGTGAAGAAGGACCTGATGCATCGGCAGATCAGGAA...CCTGGAGGTGTCCATATCTGTGGAATGTATCAGCCATCCCGTCCTAAGGTGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | TATACTGGGGAGGGCAGTAGGGTGCCATGTCACATGGAACCCTTCACTACAGCTAGTTCCTCTTCCCGCTaGTTCTTCTCTTTCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YTGEGSRVPCHMEPFTTASSSSR*FFSFRS Trigger: GCTCCTGAAAGAGAAGAAGCAGCGGGAAGAGGAACT...AGCTGTAGTGAAGGGTTCCATGTGACATGGCACCCTACTGCCCTCCCCAGTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | TACAAATTCACATGTGCATGTGGAAGCCAAAGGATCTCGGATCATTCCGCCTCGGGGCAGGTAGTGCTCTaGAGAAAGCTCCACCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YKFTCACGSQRISDHSASGQVVL*RKLHQQ Trigger: CTGCTGGTGGAGCTTTCTGCAGAGCACTACCTGCCC...CGAGGCGGAATGATCCGAGATCCTTTGGCTTCCACATGCACATGTGAATTTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | GTGCACCTTAGGACGGGATGGCTGATACATTCCACAGATATGGACACCTCCAGGCTCTTCTTTTGCCTCTaGTTGTCCTGCAGGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VHLRTGWLIHSTDMDTSRLFFCL*LSCRSL Trigger: GAGACTCCTGCAGGACAACCAGAGGCAAAAGAAGAG...CCTGGAGGTGTCCATATCTGTGGAATGTATCAGCCATCCCGTCCTAAGGTGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR TCA 90 bp | GTGCACCTTAGGACGGGATGGCTGATACATTCCACAGATATGGACACCTCCAGGAGCGAGGGAGATGCGTaGGTTGATTTCTTTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: VHLRTGWLIHSTDMDTSRSEGDA*VDFFPH Trigger: ATGTGGAAAGAAATCAACTCACGCATCTCCCTCGCT...CCTGGAGGTGTCCATATCTGTGGAATGTATCAGCCATCCCGTCCTAAGGTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR TCA 90 bp | TACAAATTCACATGTGCATGTGGAAGCCAAAGGATCTCGGATCATTCCGCCTCGCTGTCTCCTCCTGGGTaGTGGACATCAACTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YKFTCACGSQRISDHSASLSPPG*WTSTAP Trigger: TGGAGCAGTTGATGTCCATCACCCAGGAGGAGACAG...CGAGGCGGAATGATCCGAGATCCTTTGGCTTCCACATGCACATGTGAATTTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGTACAAATTCACATGTGCATGTGGAAGCCAAAGGATCTCGGATCATTCCGCGATCTCACGCTGCCTaGGGTTCTCTGTCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TGTNSHVHVEAKGSRIIPRSHAA*GSLSPP Trigger: AGGAGGAGACAGAGAACCTCAGGCAGCGTGAGATCG...CGGAATGATCCGAGATCCTTTGGCTTCCACATGCACATGTGAATTTGTACCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR TCA 90 bp | TACAAATTCACATGTGCATGTGGAAGCCAAAGGATCTCGGATCATTCCGCCTCGCATAGGCCATCTGGATaGGCCGGCTCTTACAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YKFTCACGSQRISDHSASHRPSG*AGSYSS Trigger: AGAGCTGTAAGAGCCGGCTCATCCAGATGGCCTATG...CGAGGCGGAATGATCCGAGATCCTTTGGCTTCCACATGCACATGTGAATTTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | GTGCACCTTAGGACGGGATGGCTGATACATTCCACAGATATGGACACCTCCAGGTCAGAACTCTTCTTTTaGCTCTGGTTGTCCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VHLRTGWLIHSTDMDTSRSELFF*LWLSCR Trigger: CCTGCAGGACAACCAGAGGCAAAAGAAGAGTTCTGA...CCTGGAGGTGTCCATATCTGTGGAATGTATCAGCCATCCCGTCCTAAGGTGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | GAGGTCTCATTAGCCTGGAACTCACTAACTCGGTTAGCTTGGCTGACTGGTGAGTTCTCTTTCAGGAGCTaGTGGAGCAGGTTGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: EVSLAWNSLTRLAWLTGEFSFRS*WSRLLS Trigger: ACTCAGCAACCTGCTCCAGCAGCTCCTGAAAGAGAA...CTCACCAGTCAGCCAAGCTAACCGAGTTAGTGAGTTCCAGGCTAATGAGACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | GTGCACCTTAGGACGGGATGGCTGATACATTCCACAGATATGGACACCTCCAGGTTTGCCAGACACATCTaGTACTCCAGGCGTTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VHLRTGWLIHSTDMDTSRFARHI*YSRRFR Trigger: TCGAAAACGCCTGGAGTACCAGATGTGTCTGGCAAA...CCTGGAGGTGTCCATATCTGTGGAATGTATCAGCCATCCCGTCCTAAGGTGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | GTGCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTAGTGAGGTGGTTTGTATaGACAATCAACACCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLGSLAQPTPSQRHWCTLVRWFV*TINTFF Trigger: GAAAAAGGTGTTGATTGTCCATACAAACCACCTCAC...TAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | CTTAGGACGGGATGGCTGATACATTCCACAGATATGGACACCTCCAGGAGGGGCTCTATTAGCCTAATCTaGTTCCTGATCTGCCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LRTGWLIHSTDMDTSRRGSISLI*FLICRC Trigger: GCATCGGCAGATCAGGAACCAGATTAGGCTAATAGA...GCCCCTCCTGGAGGTGTCCATATCTGTGGAATGTATCAGCCATCCCGTCCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| 3UTR CAA 72 bp | CCCAAGGCTCCACCACCAGCAGATTTGCCCTGTCTTTaGTTCACTGTTCAGAATAGCTATGTCACAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PKAPPPADLPCL*FTVQNSYVTGQ Trigger: CTGGCCTGTGACATAGCTATTCTGAACAGTGAACAAAAGACAGGGCAAATCTGCTGGTGGTGGAGCCTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGTACAAATTCACATGTGCATGTGGAAGCCAAAGGATCTCGGATCATTCCGTCCTGCTTGACCGTCTaGAGGATCTCGTCCTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TGTNSHVHVEAKGSRIIPSCLTV*RISSLW Trigger: CCACAAGGACGAGATCCTGCAGACGGTCAAGCAGGA...CGGAATGATCCGAGATCCTTTGGCTTCCACATGCACATGTGAATTTGTACCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTTTCCACATTCAATACCTGCAGGACTGTCAGCTGCCCCATGTCATCAGGATTCGAGCCTCCTCACTaGGTTTCCGCTTCCGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLSTFNTCRTVSCPMSSGFEPPH*VSASER Trigger: TCTTTCGGAAGCGGAAACCCAGTGAGGAGGCTCGAA...TCCTGATGACATGGGGCAGCTGACAGTCCTGCAGGTATTGAATGTGGAAAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191838.6 |
||
| CDS-3UTR CCA 90 bp | TATACTGGGGAGGGCAGTAGGGTGCCATGTCACATGGAACCCTTCACTACAGCTTGCAAAAGCCCCAAATaGAATCTCAGAGAGCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: YTGEGSRVPCHMEPFTTACKSPK*NLRELT Trigger: TGTGAGCTCTCTGAGATTCCATTTGGGGCTTTTGCA...AGCTGTAGTGAAGGGTTCCATGTGACATGGCACCCTACTGCCCTCCCCAGTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | GTGCACCTTAGGACGGGATGGCTGATACATTCCACAGATATGGACACCTCCAGGCAAGACAGAATCTGCTaGAACCGCTTGTCCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VHLRTGWLIHSTDMDTSRQDRIC*NRLSIS Trigger: TGAAATGGACAAGCGGTTCCAGCAGATTCTGTCTTG...CCTGGAGGTGTCCATATCTGTGGAATGTATCAGCCATCCCGTCCTAAGGTGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | GTTGCCTCAGCAGCCCCCTCACCTAGGATAATCATTGCAGGAACACAACCTGTCCAAGACAGAATCTGCTaGAACCGCTTGTCCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VASAAPSPRIIIAGTQPVQDRIC*NRLSIS Trigger: TGAAATGGACAAGCGGTTCCAGCAGATTCTGTCTTG...GACAGGTTGTGTTCCTGCAATGATTATCCTAGGTGAGGGGGCTGCTGAGGCAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR TCA 90 bp | TATACTGGGGAGGGCAGTAGGGTGCCATGTCACATGGAACCCTTCACTACAGCTGGGAGATGCGTGAGTTaGTTTCTTTCCACATTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: YTGEGSRVPCHMEPFTTAGRCVS*FLSTFN Trigger: ATTGAATGTGGAAAGAAATCAACTCACGCATCTCCC...AGCTGTAGTGAAGGGTTCCATGTGACATGGCACCCTACTGCCCTCCCCAGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR TCA 90 bp | TACAAATTCACATGTGCATGTGGAAGCCAAAGGATCTCGGATCATTCCGCCTCGTGCATTACACTCTCCTaGAGGATCTGGCTGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YKFTCACGSQRISDHSASCITLS*RIWLMA Trigger: AGCCATCAGCCAGATCCTTCAGGAGAGTGTAATGCA...CGAGGCGGAATGATCCGAGATCCTTTGGCTTCCACATGCACATGTGAATTTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | CTTAGGACGGGATGGCTGATACATTCCACAGATATGGACACCTCCAGGAGGGGCGTGAGGTGGTTTGTATaGACAATCAACACCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LRTGWLIHSTDMDTSRRGVRWFV*TINTFF Trigger: GAAAAAGGTGTTGATTGTCCATACAAACCACCTCAC...GCCCCTCCTGGAGGTGTCCATATCTGTGGAATGTATCAGCCATCCCGTCCTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | GTGCACCTTAGGACGGGATGGCTGATACATTCCACAGATATGGACACCTCCAGGAAGGACAAAGGCTTCTaGTTTAAAAGCCGTTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VHLRTGWLIHSTDMDTSRKDKGF*FKSRWY Trigger: GTACCAACGGCTTTTAAACCAGAAGCCTTTGTCCTT...CCTGGAGGTGTCCATATCTGTGGAATGTATCAGCCATCCCGTCCTAAGGTGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGTACAAATTCACATGTGCATGTGGAAGCCAAAGGATCTCGGATCATTCCGATCTGGTTCCTGATCTaGCGATGCATCAGGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TGTNSHVHVEAKGSRIIPIWFLI*RCIRSF Trigger: GAAGGACCTGATGCATCGGCAGATCAGGAACCAGAT...CGGAATGATCCGAGATCCTTTGGCTTCCACATGCACATGTGAATTTGTACCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGTACAAATTCACATGTGCATGTGGAAGCCAAAGGATCTCGGATCATTCCGTTCTCTTTCAGGAGCTaGTGGAGCAGGTTGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TGTNSHVHVEAKGSRIIPFSFRS*WSRLLS Trigger: ACTCAGCAACCTGCTCCAGCAGCTCCTGAAAGAGAA...CGGAATGATCCGAGATCCTTTGGCTTCCACATGCACATGTGAATTTGTACCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGTACAAATTCACATGTGCATGTGGAAGCCAAAGGATCTCGGATCATTCCGAGTTCCTCTTCCCGCTaGTTCTTCTCTTTCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGTNSHVHVEAKGSRIIPSSSSR*FFSFRS Trigger: GCTCCTGAAAGAGAAGAAGCAGCGGGAAGAGGAACT...CGGAATGATCCGAGATCCTTTGGCTTCCACATGCACATGTGAATTTGTACCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | ATTCAATACCTGCAGGACTGTCAGCTGCCCCATGTCATCAGGAAGGGCTGTCAGGTGAGGTGGTTTGTATaGACAATCAACACCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IQYLQDCQLPHVIRKGCQVRWFV*TINTFF Trigger: GAAAAAGGTGTTGATTGTCCATACAAACCACCTCAC...CTGACAGCCCTTCCTGATGACATGGGGCAGCTGACAGTCCTGCAGGTATTGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191838.6 |
||
| CDS-3UTR TCA 90 bp | ACAGGTACAAATTCACATGTGCATGTGGAAGCCAAAGGATCTCGGATCATTCCGAGCGAGGGAGATGCGTaGGTTGATTTCTTTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: TGTNSHVHVEAKGSRIIPSEGDA*VDFFPH Trigger: ATGTGGAAAGAAATCAACTCACGCATCTCCCTCGCT...CGGAATGATCCGAGATCCTTTGGCTTCCACATGCACATGTGAATTTGTACCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGTACAAATTCACATGTGCATGTGGAAGCCAAAGGATCTCGGATCATTCCGTTTGCCAGACACATCTaGTACTCCAGGCGTTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TGTNSHVHVEAKGSRIIPFARHI*YSRRFR Trigger: TCGAAAACGCCTGGAGTACCAGATGTGTCTGGCAAA...CGGAATGATCCGAGATCCTTTGGCTTCCACATGCACATGTGAATTTGTACCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS GCA 90 bp | CTGGCGATGCTCTGCTCCGTCTGCTTGAGCTGCTCCTGCAGCTGCTaGCGCTCTGCATCCAGACAGCGCTGGCGCTCGCTCAGGTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LAMLCSVCLSCSCSC*RSASRQRWRSLRSC Trigger: GCAGGACCTGAGCGAGCGCCAGCGCTGTCTGGATGCAGAGCGGCAGCAGCTGCAGGAGCAGCTCAAGCAGACGGAGCAGAGCATCGCCAG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS CCA 90 bp | GCTGTGGTAGATCCGGAGGCGCTGGGAGATCTCCTGGCGGCACAGTaGGCAGGTGCGCAGAGGCTGGCAGCACTGCTGACAGCAGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: AVVDPEALGDLLAAQ*AGAQRLAALLTAAD Trigger: GTCTGCTGCTGTCAGCAGTGCTGCCAGCCTCTGCGCACCTGCCCACTGTGCCGCCAGGAGATCTCCCAGCGCCTCCGGATCTACCACAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS TCA 90 bp | TCCTGGCGGCACAGTGGGCAGGTGCGCAGAGGCTGGCAGCACTGCTaGCAGCAGCAGACGTGGCCACAGGTGAGGAAGACCATCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SWRHSGQVRRGWQHC*QQQTWPQVRKTIWA Trigger: AGCCCAGATGGTCTTCCTCACCTGTGGCCACGTCTGCTGCTGTCAGCAGTGCTGCCAGCCTCTGCGCACCTGCCCACTGTGCCGCCAGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS GCA 90 bp | TGCTTGACCGTCTGCAGGATCTCGTCCTTGTGGCTGTGGCTCTGCTaGAGTAGCTCAGCGTGCTCCCGCTGCCCAAGGTCCAGGCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: CLTVCRISSLWLWLC*SSSACSRCPRSRRR Trigger: GCGGCGCCTGGACCTTGGGCAGCGGGAGCACGCTGAGCTACTGCAGCAGAGCCACAGCCACAAGGACGAGATCCTGCAGACGGTCAAGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS CCA 90 bp | GAGGAACTGCTGCACGGCCGCAGTGCCAGCGCCACACACCTCTGGTaGGGGGTAGACCATTGCCAAGGCGTTGAGGCTCAGCGTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EELLHGRSASATHLW*GVDHCQGVEAQRLQ Trigger: CTGGAGACGCTGAGCCTCAACGCCTTGGCAATGGTCTACCCCCCACCAGAGGTGTGTGGCGCTGGCACTGCGGCCGTGCAGCAGTTCCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS GCA 90 bp | AGGATCTCGTCCTTGTGGCTGTGGCTCTGCTGCAGTAGCTCAGCGTaGTCCCGCTGCCCAAGGTCCAGGCGCCGCTCGAACTCCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RISSLWLWLCCSSSA*SRCPRSRRRSNSSF Trigger: GAAGCTGGAGTTCGAGCGGCGCCTGGACCTTGGGCAGCGGGAGCACGCTGAGCTACTGCAGCAGAGCCACAGCCACAAGGACGAGATCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS GCA 90 bp | TCCTGCTTGACCGTCTGCAGGATCTCGTCCTTGTGGCTGTGGCTCTaGTGCAGTAGCTCAGCGTGCTCCCGCTGCCCAAGGTCCAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SCLTVCRISSLWLWL*CSSSACSRCPRSRR Trigger: GCGCCTGGACCTTGGGCAGCGGGAGCACGCTGAGCTACTGCAGCAGAGCCACAGCCACAAGGACGAGATCCTGCAGACGGTCAAGCAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS GCA 90 bp | CAGCGCTGGCGCTCGCTCAGGTCCTGCTCTAGCCGTGTCTGCTCCTaGTTGACCGTCTGCAGGATCTCGTCCTTGTGGCTGTGGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QRWRSLRSCSSRVCS*LTVCRISSLWLWLC Trigger: GCAGAGCCACAGCCACAAGGACGAGATCCTGCAGACGGTCAAGCAGGAGCAGACACGGCTAGAGCAGGACCTGAGCGAGCGCCAGCGCTG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS CCA 90 bp | TTGAGCTGCTCCTGCAGCTGCTGCCGCTCTGCATCCAGACAGCGCTaGCGCTCGCTCAGGTCCTGCTCTAGCCGTGTCTGCTCCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSCSCSCCRSASRQR*RSLRSCSSRVCSCL Trigger: CAAGCAGGAGCAGACACGGCTAGAGCAGGACCTGAGCGAGCGCCAGCGCTGTCTGGATGCAGAGCGGCAGCAGCTGCAGGAGCAGCTCAA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS GCA 90 bp | TCCAGACAGCGCTGGCGCTCGCTCAGGTCCTGCTCTAGCCGTGTCTaGTCCTGCTTGACCGTCTGCAGGATCTCGTCCTTGTGGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SRQRWRSLRSCSSRV*SCLTVCRISSLWLW Trigger: CCACAGCCACAAGGACGAGATCCTGCAGACGGTCAAGCAGGAGCAGACACGGCTAGAGCAGGACCTGAGCGAGCGCCAGCGCTGTCTGGA 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS CCA 90 bp | GTCTGCTCCTGCTTGACCGTCTGCAGGATCTCGTCCTTGTGGCTGTaGCTCTGCTGCAGTAGCTCAGCGTGCTCCCGCTGCCCAAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VCSCLTVCRISSLWL*LCCSSSACSRCPRS Trigger: GGACCTTGGGCAGCGGGAGCACGCTGAGCTACTGCAGCAGAGCCACAGCCACAAGGACGAGATCCTGCAGACGGTCAAGCAGGAGCAGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS CCA 90 bp | AGCCGTGTCTGCTCCTGCTTGACCGTCTGCAGGATCTCGTCCTTGTaGCTGTGGCTCTGCTGCAGTAGCTCAGCGTGCTCCCGCTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SRVCSCLTVCRISSL*LWLCCSSSACSRCP Trigger: TGGGCAGCGGGAGCACGCTGAGCTACTGCAGCAGAGCCACAGCCACAAGGACGAGATCCTGCAGACGGTCAAGCAGGAGCAGACACGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS TCA 90 bp | CCTGCTGCGCCAGGCTCTGCCTCTGAGACTCATAGGCCATCTGGATaGGCCGGCTCTTACAGCTCTCCGTCAGCATCTGCTGCATGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PAAPGSASETHRPSG*AGSYSSPSASAAWR Trigger: CCGCCATGCAGCAGATGCTGACGGAGAGCTGTAAGAGCCGGCTCATCCAGATGGCCTATGAGTCTCAGAGGCAGAGCCTGGCGCAGCAGG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 ENSMUST00000195713.2 |
||
| CDS GCA 90 bp | GCCATCTGGATGAGCCGGCTCTTACAGCTCTCCGTCAGCATCTGCTaGATGGCGGCGGCGATCTCACGCTGCCTGAGGTTCTCTGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AIWMSRLLQLSVSIC*MAAAISRCLRFSVS Trigger: GGAGACAGAGAACCTCAGGCAGCGTGAGATCGCCGCCGCCATGCAGCAGATGCTGACGGAGAGCTGTAAGAGCCGGCTCATCCAGATGGC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS TCA 90 bp | AGCGTCTCCAGGGTCCGCACGTGCGCCAGCATCTGGGGAAGTCTCTaGATCTCGTTCTCACTAATGTCGAGTGTCCGCAGGCTCCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SVSRVRTCASIWGSL*ISFSLMSSVRRLRS Trigger: GCTGCGGAGCCTGCGGACACTCGACATTAGTGAGAACGAGATTCAGAGACTTCCCCAGATGCTGGCGCACGTGCGGACCCTGGAGACGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS TCA 90 bp | CACCTTAGCCAGATCTCCGGGGCTCATTCGGCTCAGCATGTCCAGTaGGATGCGGTGGTGGGCGAAGAGGGGCAGGTAGTGCTCTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: HLSQISGAHSAQHVQ*DAVVGEEGQVVLCR Trigger: TCTGCAGAGCACTACCTGCCCCTCTTCGCCCACCACCGCATCTCACTGGACATGCTGAGCCGAATGAGCCCCGGAGATCTGGCTAAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS GCA 90 bp | CTAGGCACAGCTAGCAGGTCCTGGGCTCTCCGTAGGATCTCATGTTaGAGGCCTGCTTCTGAGACGCCCACCTTAGCCAGATCTCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LGTASRSWALRRISC*RPASETPTLARSPG Trigger: CCCCGGAGATCTGGCTAAGGTGGGCGTCTCAGAAGCAGGCCTGCAACATGAGATCCTACGGAGAGCCCAGGACCTGCTAGCTGTGCCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTAGGCGTGTCTGCTCCTGCTaGACCGTCTGCAGGATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: AGESCTTHPFPETLVHLRRVCSC*TVCRIS Trigger: CGAGATCCTGCAGACGGTCAAGCAGGAGCAGACACG...CCTAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CAA 90 bp | TCACAGGCCAGGAACATTCCACCTGCCTGCCTAGTGCTCAGAGCAGTGGGGGTCCGTGTCTGCTCCTGCTaGACCGTCTGCAGGATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SQARNIPPACLVLRAVGVRVCSC*TVCRIS Trigger: CGAGATCCTGCAGACGGTCAAGCAGGAGCAGACACG...GACCCCCACTGCTCTGAGCACTAGGCAGGCAGGTGGAATGTTCCTGGCCTGTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS GCA 90 bp | GGAGAATCGGCTTGCGGGTCCATCGGGGCTGTCTTGGGTGTTCTCTaGTCCATCTTGCTCCAGGACTGGCAGCAGGTACTGAGAAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GESACGSIGAVLGVL*SILLQDWQQVLRRW Trigger: CCACCTTCTCAGTACCTGCTGCCAGTCCTGGAGCAAGATGGAGCAGAGAACACCCAAGACAGCCCCGATGGACCCGCAAGCCGATTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS GCA 90 bp | TCGCTCAGGTCCTGCTCTAGCCGTGTCTGCTCCTGCTTGACCGTCTaGAGGATCTCGTCCTTGTGGCTGTGGCTCTGCTGCAGTAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLRSCSSRVCSCLTV*RISSLWLWLCCSSS Trigger: TGAGCTACTGCAGCAGAGCCACAGCCACAAGGACGAGATCCTGCAGACGGTCAAGCAGGAGCAGACACGGCTAGAGCAGGACCTGAGCGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CAA 90 bp | TCACAGGCCAGGAACATTCCACCTGCCTGCCTAGTGCTCAGAGCAGTGGGGGTCGTTCTCTGCTCCATCTaGCTCCAGGACTGGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SQARNIPPACLVLRAVGVVLCSI*LQDWQQ Trigger: CTGCTGCCAGTCCTGGAGCAAGATGGAGCAGAGAAC...GACCCCCACTGCTCTGAGCACTAGGCAGGCAGGTGGAATGTTCCTGGCCTGTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS GCA 90 bp | GGAGAACCGATTCTGCCATTCAGCCTCCTCCCTGGAGAATCGGCTTaGGGGTCCATCGGGGCTGTCTTGGGTGTTCTCTGCTCCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GEPILPFSLLPGESA*GSIGAVLGVLCSIL Trigger: CAAGATGGAGCAGAGAACACCCAAGACAGCCCCGATGGACCCGCAAGCCGATTCTCCAGGGAGGAGGCTGAATGGCAGAATCGGTTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CAA 90 bp | GTGCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTAGTTCTCTGCTCCATCTaGCTCCAGGACTGGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLGSLAQPTPSQRHWCTLVLCSI*LQDWQQ Trigger: CTGCTGCCAGTCCTGGAGCAAGATGGAGCAGAGAAC...TAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CAA 90 bp | GTGCTGGGGAGTCTTGCACAACCCACCCCTTCCCAGAGACACTGGTGCACCTTATCCATCGGGGCTGTCTaGGGTGTTCTCTGCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: VLGSLAQPTPSQRHWCTLSIGAV*GVLCSI Trigger: GATGGAGCAGAGAACACCCAAGACAGCCCCGATGGA...TAAGGTGCACCAGTGTCTCTGGGAAGGGGTGGGTTGTGCAAGACTCCCCAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS CCA 90 bp | AGTGGTTTCAACTCTGGCTGGACCCTAGGCACAGCTAGCAGGTCCTaGGCTCTCCGTAGGATCTCATGTTGCAGGCCTGCTTCTGAGACG | + |
|
Preference number: 5 (lower is better) Translates to: SGFNSGWTLGTASRS*ALRRISCCRPASET Trigger: CGTCTCAGAAGCAGGCCTGCAACATGAGATCCTACGGAGAGCCCAGGACCTGCTAGCTGTGCCTAGGGTCCAGCCAGAGTTGAAACCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CAA 90 bp | CAGTGGGGGTCGGGGTGGCAGGTGGTGGGTGACAAAGGCCTATGGCAGTCTTGCGGAAGCTCCTTCAGCTaGTTGTCTTTTACATTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QWGSGWQVVGDKGLWQSCGSSFS*LSFTLS Trigger: GCTCAATGTAAAAGACAACAAGCTGAAGGAGCTTCC...GCAAGACTGCCATAGGCCTTTGTCACCCACCACCTGCCACCCCGACCCCCACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CAA 90 bp | GTTGCCTCAGCAGCCCCCTCACCTAGGATAATCATTGCAGGAACACAACCTGTCTGCAGGATCTCGTCCTaGTGGCTGTGGCTCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VASAAPSPRIIIAGTQPVCRISS*WLWLCC Trigger: GCAGCAGAGCCACAGCCACAAGGACGAGATCCTGCA...GACAGGTTGTGTTCCTGCAATGATTATCCTAGGTGAGGGGGCTGCTGAGGCAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS TCA 90 bp | ATCTCAGAACTCTTCTTTTGCCTCTGGTTGTCCTGCAGGAGTCTCTaGATGCGGCTGGCGATGCTCTGCTCCGTCTGCTTGAGCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ISELFFCLWLSCRSL*MRLAMLCSVCLSCS Trigger: GGAGCAGCTCAAGCAGACGGAGCAGAGCATCGCCAGCCGCATTCAGAGACTCCTGCAGGACAACCAGAGGCAAAAGAAGAGTTCTGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CAA 90 bp | TATACTGGGGAGGGCAGTAGGGTGCCATGTCACATGGAACCCTTCACTACAGCTTCCATCGGGGCTGTCTaGGGTGTTCTCTGCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: YTGEGSRVPCHMEPFTTASIGAV*GVLCSI Trigger: GATGGAGCAGAGAACACCCAAGACAGCCCCGATGGA...AGCTGTAGTGAAGGGTTCCATGTGACATGGCACCCTACTGCCCTCCCCAGTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CAA 90 bp | ATGAGGGTAGGTGGGAGTCCAGCAGTGGTGGAGATGGTACCAAGGAAGGGCCAGCTCAGAACTCTTCTTTaGCCTCTGGTTGTCCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: MRVGGSPAVVEMVPRKGQLRTLL*PLVVLQ Trigger: CTGCAGGACAACCAGAGGCAAAAGAAGAGTTCTGAG...CTGGCCCTTCCTTGGTACCATCTCCACCACTGCTGGACTCCCACCTACCCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS CCA 90 bp | TGCAGGACTGTCAGCTGCCCCATGTCATCAGGAAGGGCTGTCAGCTaGTTCTCATGGAGATCCAGAACCTTGATGGTGACAAGGCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: CRTVSCPMSSGRAVS*FSWRSRTLMVTRLK Trigger: CTTGAGCCTTGTCACCATCAAGGTTCTGGATCTCCATGAGAACCAGCTGACAGCCCTTCCTGATGACATGGGGCAGCTGACAGTCCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 ENSMUST00000127321.8 ENSMUST00000133832.8 ENSMUST00000147528.8 |
||
| CDS-3UTR CAA 90 bp | CTTAGGACGGGATGGCTGATACATTCCACAGATATGGACACCTCCAGGAGGGGCATCTGCTGGAACCGCTaGTCCATTTCAGCCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LRTGWLIHSTDMDTSRRGICWNR*SISAML Trigger: CAGCATGGCTGAAATGGACAAGCGGTTCCAGCAGAT...GCCCCTCCTGGAGGTGTCCATATCTGTGGAATGTATCAGCCATCCCGTCCTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS TCA 90 bp | TGGAGCTGCAGCAGGTTCCCAATAGAGCGAGGGAGATGCGTGAGTTaGTTTCTTTCCACATTCAATACCTGCAGGACTGTCAGCTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: WSCSRFPIERGRCVS*FLSTFNTCRTVSCP Trigger: GGGGCAGCTGACAGTCCTGCAGGTATTGAATGTGGAAAGAAATCAACTCACGCATCTCCCTCGCTCTATTGGGAACCTGCTGCAGCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CAA 90 bp | AATGAGGGTAGGTGGGAGTCCAGCAGTGGTGGAGATGGTACCAAGGAAGGGCCAGGAAGCTCCTTCAGCTaGTTGTCTTTTACATTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: NEGRWESSSGGDGTKEGPGSSFS*LSFTLS Trigger: GCTCAATGTAAAAGACAACAAGCTGAAGGAGCTTCC...TGGCCCTTCCTTGGTACCATCTCCACCACTGCTGGACTCCCACCTACCCTCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGTACAAATTCACATGTGCATGTGGAAGCCAAAGGATCTCGGATCATTCCGTGCAGGATCTCGTCCTaGTGGCTGTGGCTCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TGTNSHVHVEAKGSRIIPCRISS*WLWLCC Trigger: GCAGCAGAGCCACAGCCACAAGGACGAGATCCTGCA...CGGAATGATCCGAGATCCTTTGGCTTCCACATGCACATGTGAATTTGTACCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CAA 90 bp | GTGCACCTTAGGACGGGATGGCTGATACATTCCACAGATATGGACACCTCCAGGCTCAGAACTCTTCTTTaGCCTCTGGTTGTCCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VHLRTGWLIHSTDMDTSRLRTLL*PLVVLQ Trigger: CTGCAGGACAACCAGAGGCAAAAGAAGAGTTCTGAG...CCTGGAGGTGTCCATATCTGTGGAATGTATCAGCCATCCCGTCCTAAGGTGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CAA 90 bp | GTTGCCTCAGCAGCCCCCTCACCTAGGATAATCATTGCAGGAACACAACCTGTCGTAGAACTTTGCACGTaGCAAAAGCCCCAAATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VASAAPSPRIIIAGTQPVVELCT*QKPQME Trigger: TTCCATTTGGGGCTTTTGCAACGTGCAAAGTTCTAC...GACAGGTTGTGTTCCTGCAATGATTATCCTAGGTGAGGGGGCTGCTGAGGCAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CAA 90 bp | GTGCACCTTAGGACGGGATGGCTGATACATTCCACAGATATGGACACCTCCAGGGTAGAACTTTGCACGTaGCAAAAGCCCCAAATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VHLRTGWLIHSTDMDTSRVELCT*QKPQME Trigger: TTCCATTTGGGGCTTTTGCAACGTGCAAAGTTCTAC...CCTGGAGGTGTCCATATCTGTGGAATGTATCAGCCATCCCGTCCTAAGGTGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
||
| CDS-3UTR CAA 90 bp | TTCCACATTCAATACCTGCAGGACTGTCAGCTGCCCCATGTCATCAGGAAGGGCGTAGAACTTTGCACGTaGCAAAAGCCCCAAATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: FHIQYLQDCQLPHVIRKGVELCT*QKPQME Trigger: TTCCATTTGGGGCTTTTGCAACGTGCAAAGTTCTAC...GCCCTTCCTGATGACATGGGGCAGCTGACAGTCCTGCAGGTATTGAATGTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000191838.6 |
||
| CDS-3UTR CAA 90 bp | ACAGGTACAAATTCACATGTGCATGTGGAAGCCAAAGGATCTCGGATCATTCCGATCTGCTGGAACCGCTaGTCCATTTCAGCCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TGTNSHVHVEAKGSRIIPICWNR*SISAML Trigger: CAGCATGGCTGAAATGGACAAGCGGTTCCAGCAGAT...CGGAATGATCCGAGATCCTTTGGCTTCCACATGCACATGTGAATTTGTACCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS GCA 72 bp | CTGTGGCTCTGCTGCAGTAGCTCAGCGTGCTCCCGCTaGCCAAGGTCCAGGCGCCGCTCGAACTCCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LWLCCSSSACSR*PRSRRRSNSSF Trigger: GAAGCTGGAGTTCGAGCGGCGCCTGGACCTTGGGCAGCGGGAGCACGCTGAGCTACTGCAGCAGAGCCACAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS GCA 72 bp | TCCTTGTGGCTGTGGCTCTGCTGCAGTAGCTCAGCGTaGTCCCGCTGCCCAAGGTCCAGGCGCCGCTCGAAC | + |
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Preference number: 6 (lower is better) Translates to: SLWLWLCCSSSA*SRCPRSRRRSN Trigger: GTTCGAGCGGCGCCTGGACCTTGGGCAGCGGGAGCACGCTGAGCTACTGCAGCAGAGCCACAGCCACAAGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS CCA 72 bp | CTGCACGGCCGCAGTGCCAGCGCCACACACCTCTGGTaGGGGGTAGACCATTGCCAAGGCGTTGAGGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: LHGRSASATHLW*GVDHCQGVEAQ Trigger: CTGAGCCTCAACGCCTTGGCAATGGTCTACCCCCCACCAGAGGTGTGTGGCGCTGGCACTGCGGCCGTGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS GCA 72 bp | ATGCTCTGCTCCGTCTGCTTGAGCTGCTCCTGCAGCTaGTGCCGCTCTGCATCCAGACAGCGCTGGCGCTCG | + |
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Preference number: 6 (lower is better) Translates to: MLCSVCLSCSCS*CRSASRQRWRS Trigger: CGAGCGCCAGCGCTGTCTGGATGCAGAGCGGCAGCAGCTGCAGGAGCAGCTCAAGCAGACGGAGCAGAGCAT 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS GCA 72 bp | CTGGCGATGCTCTGCTCCGTCTGCTTGAGCTGCTCCTaGAGCTGCTGCCGCTCTGCATCCAGACAGCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LAMLCSVCLSCS*SCCRSASRQRW Trigger: CCAGCGCTGTCTGGATGCAGAGCGGCAGCAGCTGCAGGAGCAGCTCAAGCAGACGGAGCAGAGCATCGCCAG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS CCA 72 bp | ACGGTCGCACTGACTCTTGGAGCTCCCGGGGAGCTGTaGGGGGCTCGAGGGCACCAAGGACCTCATTCTCGA | + |
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Preference number: 6 (lower is better) Translates to: TVALTLGAPGEL*GARGHQGPHSR Trigger: TCGAGAATGAGGTCCTTGGTGCCCTCGAGCCCCCCACAGCTCCCCGGGAGCTCCAAGAGTCAGTGCGACCGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS GCA 72 bp | GTCTGCAGGATCTCGTCCTTGTGGCTGTGGCTCTGCTaGAGTAGCTCAGCGTGCTCCCGCTGCCCAAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: VCRISSLWLWLC*SSSACSRCPRS Trigger: GGACCTTGGGCAGCGGGAGCACGCTGAGCTACTGCAGCAGAGCCACAGCCACAAGGACGAGATCCTGCAGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS GCA 72 bp | ACCGTCTGCAGGATCTCGTCCTTGTGGCTGTGGCTCTaGTGCAGTAGCTCAGCGTGCTCCCGCTGCCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: TVCRISSLWLWL*CSSSACSRCPR Trigger: CCTTGGGCAGCGGGAGCACGCTGAGCTACTGCAGCAGAGCCACAGCCACAAGGACGAGATCCTGCAGACGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS GCA 72 bp | CGCTGGCGCTCGCTCAGGTCCTGCTCTAGCCGTGTCTaGTCCTGCTTGACCGTCTGCAGGATCTCGTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: RWRSLRSCSSRV*SCLTVCRISSL Trigger: CAAGGACGAGATCCTGCAGACGGTCAAGCAGGAGCAGACACGGCTAGAGCAGGACCTGAGCGAGCGCCAGCG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS GCA 72 bp | TGGATGAGCCGGCTCTTACAGCTCTCCGTCAGCATCTaGTGCATGGCGGCGGCGATCTCACGCTGCCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: WMSRLLQLSVSI*CMAAAISRCLR Trigger: CCTCAGGCAGCGTGAGATCGCCGCCGCCATGCAGCAGATGCTGACGGAGAGCTGTAAGAGCCGGCTCATCCA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 ENSMUST00000195713.2 |
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| CDS CAA 90 bp | TCTAGCCGTGTCTGCTCCTGCTTGACCGTCTGCAGGATCTCGTCCTaGTGGCTGTGGCTCTGCTGCAGTAGCTCAGCGTGCTCCCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SSRVCSCLTVCRISS*WLWLCCSSSACSRC Trigger: GCAGCGGGAGCACGCTGAGCTACTGCAGCAGAGCCACAGCCACAAGGACGAGATCCTGCAGACGGTCAAGCAGGAGCAGACACGGCTAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS TCA 72 bp | CGCTCAGGTCCTGCTCTAGCCGTGTCTGCTCCTGCTTaGCCGTCTGCAGGATCTCGTCCTTGTGGCTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: RSGPALAVSAPA*PSAGSRPCGCG Trigger: GCCACAGCCACAAGGACGAGATCCTGCAGACGGTCAAGCAGGAGCAGACACGGCTAGAGCAGGACCTGAGCG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS GCA 72 bp | CGCTCGCTCAGGTCCTGCTCTAGCCGTGTCTGCTCCTaGTTGACCGTCTGCAGGATCTCGTCCTTGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: RSLRSCSSRVCS*LTVCRISSLWL Trigger: CAGCCACAAGGACGAGATCCTGCAGACGGTCAAGCAGGAGCAGACACGGCTAGAGCAGGACCTGAGCGAGCG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS GCA 72 bp | GTCAGCATCTGCTGCATGGCGGCGGCGATCTCACGCTaGCTGAGGTTCTCTGTCTCCTCCTGGGTGATGGAC | + |
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Preference number: 6 (lower is better) Translates to: VSICCMAAAISR*LRFSVSSWVMD Trigger: GTCCATCACCCAGGAGGAGACAGAGAACCTCAGGCAGCGTGAGATCGCCGCCGCCATGCAGCAGATGCTGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS GCA 72 bp | ATGAGCCGGCTCTTACAGCTCTCCGTCAGCATCTGCTaGATGGCGGCGGCGATCTCACGCTGCCTGAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: MSRLLQLSVSIC*MAAAISRCLRF Trigger: GAACCTCAGGCAGCGTGAGATCGCCGCCGCCATGCAGCAGATGCTGACGGAGAGCTGTAAGAGCCGGCTCAT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 ENSMUST00000195713.2 |
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| CDS CAA 90 bp | AGCCTCCTCCCTGGAGAATCGGCTTGCGGGTCCATCGGGGCTGTCTaGGGTGTTCTCTGCTCCATCTTGCTCCAGGACTGGCAGCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: SLLPGESACGSIGAV*GVLCSILLQDWQQV Trigger: TACCTGCTGCCAGTCCTGGAGCAAGATGGAGCAGAGAACACCCAAGACAGCCCCGATGGACCCGCAAGCCGATTCTCCAGGGAGGAGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS GCA 72 bp | TCCTGCTCTAGCCGTGTCTGCTCCTGCTTGACCGTCTaGAGGATCTCGTCCTTGTGGCTGTGGCTCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SCSSRVCSCLTV*RISSLWLWLCC Trigger: GCAGCAGAGCCACAGCCACAAGGACGAGATCCTGCAGACGGTCAAGCAGGAGCAGACACGGCTAGAGCAGGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS CCA 72 bp | TGCTCCTGCTTGACCGTCTGCAGGATCTCGTCCTTGTaGCTGTGGCTCTGCTGCAGTAGCTCAGCGTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: CSCLTVCRISSL*LWLCCSSSACS Trigger: GGAGCACGCTGAGCTACTGCAGCAGAGCCACAGCCACAAGGACGAGATCCTGCAGACGGTCAAGCAGGAGCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS CAA 72 bp | CCTGGAGAATCGGCTTGCGGGTCCATCGGGGCTGTCTaGGGTGTTCTCTGCTCCATCTTGCTCCAGGACTGG | + |
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Preference number: 6 (lower is better) Translates to: PGESACGSIGAV*GVLCSILLQDW Trigger: CCAGTCCTGGAGCAAGATGGAGCAGAGAACACCCAAGACAGCCCCGATGGACCCGCAAGCCGATTCTCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS CAA 72 bp | GTCTGCTCCTGCTTGACCGTCTGCAGGATCTCGTCCTaGTGGCTGTGGCTCTGCTGCAGTAGCTCAGCGTGC | + |
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Preference number: 6 (lower is better) Translates to: VCSCLTVCRISS*WLWLCCSSSAC Trigger: GCACGCTGAGCTACTGCAGCAGAGCCACAGCCACAAGGACGAGATCCTGCAGACGGTCAAGCAGGAGCAGAC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS CAA 72 bp | TCGCTCAGGTCCTGCTCTAGCCGTGTCTGCTCCTGCTaGACCGTCTGCAGGATCTCGTCCTTGTGGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: SLRSCSSRVCSC*TVCRISSLWLW Trigger: CCACAGCCACAAGGACGAGATCCTGCAGACGGTCAAGCAGGAGCAGACACGGCTAGAGCAGGACCTGAGCGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS GCA 72 bp | ATTCTGCCATTCAGCCTCCTCCCTGGAGAATCGGCTTaGGGGTCCATCGGGGCTGTCTTGGGTGTTCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: ILPFSLLPGESA*GSIGAVLGVLC Trigger: GCAGAGAACACCCAAGACAGCCCCGATGGACCCGCAAGCCGATTCTCCAGGGAGGAGGCTGAATGGCAGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS GCA 72 bp | GCTAGCAGGTCCTGGGCTCTCCGTAGGATCTCATGTTaGAGGCCTGCTTCTGAGACGCCCACCTTAGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: ASRSWALRRISC*RPASETPTLAR Trigger: TCTGGCTAAGGTGGGCGTCTCAGAAGCAGGCCTGCAACATGAGATCCTACGGAGAGCCCAGGACCTGCTAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS CCA 72 bp | AACTCTGGCTGGACCCTAGGCACAGCTAGCAGGTCCTaGGCTCTCCGTAGGATCTCATGTTGCAGGCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: NSGWTLGTASRS*ALRRISCCRPA Trigger: AGCAGGCCTGCAACATGAGATCCTACGGAGAGCCCAGGACCTGCTAGCTGTGCCTAGGGTCCAGCCAGAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS CAA 72 bp | GATTCTGCCATTCAGCCTCCTCCCTGGAGAATCGGCTaGCGGGTCCATCGGGGCTGTCTTGGGTGTTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: DSAIQPPPWRIG*RVHRGCLGCSL Trigger: CAGAGAACACCCAAGACAGCCCCGATGGACCCGCAAGCCGATTCTCCAGGGAGGAGGCTGAATGGCAGAATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS CAA 90 bp | CGGAGAACCGATTCTGCCATTCAGCCTCCTCCCTGGAGAATCGGCTaGCGGGTCCATCGGGGCTGTCTTGGGTGTTCTCTGCTCCATCTT | + |
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Preference number: 6 (lower is better) Translates to: RRTDSAIQPPPWRIG*RVHRGCLGCSLLHL Trigger: AAGATGGAGCAGAGAACACCCAAGACAGCCCCGATGGACCCGCAAGCCGATTCTCCAGGGAGGAGGCTGAATGGCAGAATCGGTTCTCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS CAA 90 bp | GCTTGCGGGTCCATCGGGGCTGTCTTGGGTGTTCTCTGCTCCATCTaGCTCCAGGACTGGCAGCAGGTACTGAGAAGGTGGGTAATAGTC | + |
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Preference number: 6 (lower is better) Translates to: ACGSIGAVLGVLCSI*LQDWQQVLRRWVIV Trigger: GACTATTACCCACCTTCTCAGTACCTGCTGCCAGTCCTGGAGCAAGATGGAGCAGAGAACACCCAAGACAGCCCCGATGGACCCGCAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS TCA 72 bp | AGGGTCCGCACGTGCGCCAGCATCTGGGGAAGTCTCTaGATCTCGTTCTCACTAATGTCGAGTGTCCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: RVRTCASIWGSL*ISFSLMSSVRR Trigger: CCTGCGGACACTCGACATTAGTGAGAACGAGATTCAGAGACTTCCCCAGATGCTGGCGCACGTGCGGACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS TCA 72 bp | CCAGGCTCTGCCTCTGAGACTCATAGGCCATCTGGATaGGCCGGCTCTTACAGCTCTCCGTCAGCATCTGCT | + |
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Preference number: 6 (lower is better) Translates to: PGSASETHRPSG*AGSYSSPSASA Trigger: AGCAGATGCTGACGGAGAGCTGTAAGAGCCGGCTCATCCAGATGGCCTATGAGTCTCAGAGGCAGAGCCTGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 ENSMUST00000195713.2 |
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| CDS CAA 72 bp | TCCATCGGGGCTGTCTTGGGTGTTCTCTGCTCCATCTaGCTCCAGGACTGGCAGCAGGTACTGAGAAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: SIGAVLGVLCSI*LQDWQQVLRRW Trigger: CCACCTTCTCAGTACCTGCTGCCAGTCCTGGAGCAAGATGGAGCAGAGAACACCCAAGACAGCCCCGATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS TCA 72 bp | CTCTTCTTTTGCCTCTGGTTGTCCTGCAGGAGTCTCTaGATGCGGCTGGCGATGCTCTGCTCCGTCTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: LFFCLWLSCRSL*MRLAMLCSVCL Trigger: CAAGCAGACGGAGCAGAGCATCGCCAGCCGCATTCAGAGACTCCTGCAGGACAACCAGAGGCAAAAGAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS CAA 72 bp | CGCAGCTCCCCCAGGGTGTCAGGAAGCTCCTTCAGCTaGTTGTCTTTTACATTGAGCGTCTGGAGCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RSSPRVSGSSFS*LSFTLSVWSCS Trigger: GCTGCAGCTCCAGACGCTCAATGTAAAAGACAACAAGCTGAAGGAGCTTCCTGACACCCTGGGGGAGCTGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS CAA 72 bp | TCCATCTGCTGCCAAGACAGAATCTGCTGGAACCGCTaGTCCATTTCAGCCATGCTGGAACAGGCCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SICCQDRICWNR*SISAMLEQACC Trigger: GCAGCAGGCCTGTTCCAGCATGGCTGAAATGGACAAGCGGTTCCAGCAGATTCTGTCTTGGCAGCAGATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS CAA 90 bp | CTGGAGCTGCAGCAGGTTCCCAATAGAGCGAGGGAGATGCGTGAGTaGATTTCTTTCCACATTCAATACCTGCAGGACTGTCAGCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: LELQQVPNRAREMRE*ISFHIQYLQDCQLP Trigger: GGGCAGCTGACAGTCCTGCAGGTATTGAATGTGGAAAGAAATCAACTCACGCATCTCCCTCGCTCTATTGGGAACCTGCTGCAGCTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS CAA 90 bp | AGATCCAGAACCTTGATGGTGACAAGGCTCAAGAGGCTGCAGGACTaGGGAAGCAGGGAGGTGAGGTGGTTTGTATGGACAATCAACACC | + |
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Preference number: 6 (lower is better) Translates to: RSRTLMVTRLKRLQD*GSREVRWFVWTINT Trigger: GGTGTTGATTGTCCATACAAACCACCTCACCTCCCTGCTTCCCAAGTCCTGCAGCCTCTTGAGCCTTGTCACCATCAAGGTTCTGGATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 ENSMUST00000127321.8 ENSMUST00000133832.8 ENSMUST00000147528.8 ENSMUST00000191838.6 |
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| CDS TCA 72 bp | AGCAGGTTCCCAATAGAGCGAGGGAGATGCGTGAGTTaGTTTCTTTCCACATTCAATACCTGCAGGACTGTC | + |
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Preference number: 6 (lower is better) Translates to: SRFPIERGRCVS*FLSTFNTCRTV Trigger: GACAGTCCTGCAGGTATTGAATGTGGAAAGAAATCAACTCACGCATCTCCCTCGCTCTATTGGGAACCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 ENSMUST00000127321.8 ENSMUST00000133832.8 |
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| CDS CCA 72 bp | AAGAGGCTGCAGGACTTGGGAAGCAGGGAGGTGAGGTaGTTTGTATGGACAATCAACACCTTTTTCTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: KRLQDLGSREVR*FVWTINTFFCR Trigger: TCTACAGAAAAAGGTGTTGATTGTCCATACAAACCACCTCACCTCCCTGCTTCCCAAGTCCTGCAGCCTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 ENSMUST00000127321.8 ENSMUST00000133832.8 ENSMUST00000147528.8 ENSMUST00000191838.6 |
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| CDS CAA 72 bp | CAGCAGGTTCCCAATAGAGCGAGGGAGATGCGTGAGTaGATTTCTTTCCACATTCAATACCTGCAGGACTGT | + |
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Preference number: 6 (lower is better) Translates to: QQVPNRAREMRE*ISFHIQYLQDC Trigger: ACAGTCCTGCAGGTATTGAATGTGGAAAGAAATCAACTCACGCATCTCCCTCGCTCTATTGGGAACCTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 ENSMUST00000127321.8 ENSMUST00000133832.8 |
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| CDS GCA 72 bp | AGAGAGCTCACATTTAGAGATGTCGAGAATGTCATCTaGCCCAGCTTCTTTTGCCAGACACATCTGGTACTC | + |
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Preference number: 6 (lower is better) Translates to: RELTFRDVENVI*PSFFCQTHLVL Trigger: GAGTACCAGATGTGTCTGGCAAAAGAAGCTGGGGCAGATGACATTCTCGACATCTCTAAATGTGAGCTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 ENSMUST00000124492.8 ENSMUST00000127321.8 ENSMUST00000133832.8 ENSMUST00000145578.8 ENSMUST00000147528.8 |
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| CDS GCA 72 bp | AGGTTCTCTGTCTCCTCCTGGGTGATGGACATCAACTaGTCCATTCTTATTCTCTCATTCTCCAGCGATTTC | + |
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Preference number: 6 (lower is better) Translates to: RFSVSSWVMDIN*SILILSFSSDF Trigger: GAAATCGCTGGAGAATGAGAGAATAAGAATGGAGCAGTTGATGTCCATCACCCAGGAGGAGACAGAGAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028132.14 ENSMUST00000113200.8 |
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| CDS GCA 72 bp | CCAAATGGAATATTTAGAGATGTCGAGAATGTCATCTaGCCCAGCTTCTTTTGCCAGACACATCTGGTACTC | + |
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Preference number: 6 (lower is better) Translates to: PNGIFRDVENVI*PSFFCQTHLVL Trigger: GAGTACCAGATGTGTCTGGCAAAAGAAGCTGGGGCAGATGACATTCTCGACATCTCTAAATATTCCATTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191838.6 |
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