Pregenerated sensors for LRRTM3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042846Ensembl transcript IDs: ENSMUST00000105439.2
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCCAAATCAACAGCAACATCCACAATGGAACAGTCTGCTCTGTCTaGTCCGTAGTGGCTTTTCTCGGCTCCAGCACATCTATCCTGAAA | + |
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Preference number: 1 (lower is better) Translates to: PQINSNIHNGTVCSV*SVVAFLGSSTSILK Trigger: TTTCAGGATAGATGTGCTGGAGCCGAGAAAAGCCACTACGGATCAGACAGAGCAGACTGTTCCATTGTGGATGTTGCTGTTGATTTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| 3UTR CCA 90 bp | TGTCACTTTAGCTGCACCTCTGAAGTGTATAGAAGTCTGTTGCTGTaGTTACGACCTTTGTTTCCAGTGATGCTTGGTCCGTGCTTTCCC | + |
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Preference number: 1 (lower is better) Translates to: CHFSCTSEVYRSLLL*LRPLFPVMLGPCFP Trigger: GGGAAAGCACGGACCAAGCATCACTGGAAACAAAGGTCGTAACCACAGCAACAGACTTCTATACACTTCAGAGGTGCAGCTAAAGTGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| 3UTR GCA 90 bp | CTGACAACGGGAGATGTATCAGGGGTTTTTCTTTGTCACTTTAGCTaGACCTCTGAAGTGTATAGAAGTCTGTTGCTGTGGTTACGACCT | + |
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Preference number: 1 (lower is better) Translates to: LTTGDVSGVFLCHFS*TSEVYRSLLLWLRP Trigger: AGGTCGTAACCACAGCAACAGACTTCTATACACTTCAGAGGTGCAGCTAAAGTGACAAAGAAAAACCCCTGATACATCTCCCGTTGTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| 3UTR GCA 90 bp | CTGTTGCTGTGGTTACGACCTTTGTTTCCAGTGATGCTTGGTCCGTaGTTTCCCCTACCTTTAACAATGGTTACTCAAAAGAATGAAATA | + |
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Preference number: 1 (lower is better) Translates to: LLLWLRPLFPVMLGP*FPLPLTMVTQKNEI Trigger: TATTTCATTCTTTTGAGTAACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGAAACAAAGGTCGTAACCACAGCAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| 3UTR GCA 90 bp | TACAAGATGTTCCCCAAATATAGTTTCAACTTCCAGATGAAAACTTaGCTTAAGAACCACACAGAGTTTGAACTGACTCGTGGTTATTTT | + |
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Preference number: 1 (lower is better) Translates to: YKMFPKYSFNFQMKT*LKNHTEFELTRGYF Trigger: AAAATAACCACGAGTCAGTTCAAACTCTGTGTGGTTCTTAAGGCAAGTTTTCATCTGGAAGTTGAAACTATATTTGGGGAACATCTTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCAACATCCACAATGGAACAGTCTGCTCTGTCTGATCCGTAGTGGCTTTTCTGTTTCCAGTGATGCTTaGTCCGTGCTTTCCCCTACC | + |
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Preference number: 2 (lower is better) Translates to: QQHPQWNSLLCLIRSGFSVSSDA*SVLSPT Trigger: GGTAGGGGAAAGCACGGACCAAGCATCACTGGAAAC...AGAAAAGCCACTACGGATCAGACAGAGCAGACTGTTCCATTGTGGATGTTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| 3UTR CAA 90 bp | TGCACCTCTGAAGTGTATAGAAGTCTGTTGCTGTGGTTACGACCTTaGTTTCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACA | + |
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Preference number: 2 (lower is better) Translates to: CTSEVYRSLLLWLRP*FPVMLGPCFPLPLT Trigger: TGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGAAACAAAGGTCGTAACCACAGCAACAGACTTCTATACACTTCAGAGGTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCAACATCCACAATGGAACAGTCTGCTCTGTCTGATCCGTAGTGGCTTTTCTGCTACTGTACAATTATaGCATATCCTCCCACCTTGG | + |
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Preference number: 2 (lower is better) Translates to: QQHPQWNSLLCLIRSGFSATVQL*HILPPW Trigger: CCAAGGTGGGAGGATATGGCATAATTGTACAGTAGC...AGAAAAGCCACTACGGATCAGACAGAGCAGACTGTTCCATTGTGGATGTTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| 3UTR CAA 90 bp | TTTCTTTGTCACTTTAGCTGCACCTCTGAAGTGTATAGAAGTCTGTaGCTGTGGTTACGACCTTTGTTTCCAGTGATGCTTGGTCCGTGC | + |
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Preference number: 2 (lower is better) Translates to: FLCHFSCTSEVYRSL*LWLRPLFPVMLGPC Trigger: GCACGGACCAAGCATCACTGGAAACAAAGGTCGTAACCACAGCAACAGACTTCTATACACTTCAGAGGTGCAGCTAAAGTGACAAAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| 3UTR-3UTR GCA 90 bp | TCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACAATGGTTACTCAAAAGTTTCTGGGCACAAATaGAGTAACAAAACGGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: SSDAWSVLSPTFNNGYSKVSGHK*SNKTAP Trigger: AGGGGCCGTTTTGTTACTGCATTTGTGCCCAGAAAC...TTTTGAGTAACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACAATGGTTACTCAAAAACCTGTCTATGTAATTaGAGAACCTCTCACACGTCT | + |
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Preference number: 2 (lower is better) Translates to: SSDAWSVLSPTFNNGYSKTCLCN*RTSHTS Trigger: AGACGTGTGAGAGGTTCTTCAATTACATAGACAGGT...TTTTGAGTAACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| 3UTR-3UTR GCA 90 bp | AGTCTGTTGCTGTGGTTACGACCTTTGTTTCCAGTGATGCTTGGTCCGTGCTTTGTAGATAAAACCCTATaGAGTAAGCACGGTAATGAT | + |
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Preference number: 2 (lower is better) Translates to: SLLLWLRPLFPVMLGPCFVDKTL*SKHGND Trigger: ATCATTACCGTGCTTACTGCATAGGGTTTTATCTAC...AAAGCACGGACCAAGCATCACTGGAAACAAAGGTCGTAACCACAGCAACAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| 3UTR CAA 90 bp | ATAAAACCCTATGCAGTAAGCACGGTAATGATTAAAAATCGTGCATaGTCCGCACAGCACAGATTTCAGAGTCAAGGTTTCTGGGCACAA | + |
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Preference number: 2 (lower is better) Translates to: IKPYAVSTVMIKNRA*SAQHRFQSQGFWAQ Trigger: TTGTGCCCAGAAACCTTGACTCTGAAATCTGTGCTGTGCGGACAATGCACGATTTTTAATCATTACCGTGCTTACTGCATAGGGTTTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| 3UTR-3UTR TCA 90 bp | CGGCTCCAGCACATCTATCCTGAAAGGACCGGATGTATAAAGTTCTTTCTTAGAGTTTCAACTTCCAGATaGAAACTTGCCTTAAGAACC | + |
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Preference number: 2 (lower is better) Translates to: RLQHIYPERTGCIKFFLRVSTSR*KLALRT Trigger: GGTTCTTAAGGCAAGTTTTCATCTGGAAGTTGAAAC...TCTAAGAAAGAACTTTATACATCCGGTCCTTTCAGGATAGATGTGCTGGAGCCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| 3UTR CCA 72 bp | AGCTGCACCTCTGAAGTGTATAGAAGTCTGTTGCTGTaGTTACGACCTTTGTTTCCAGTGATGCTTGGTCCG | + |
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Preference number: 3 (lower is better) Translates to: SCTSEVYRSLLL*LRPLFPVMLGP Trigger: CGGACCAAGCATCACTGGAAACAAAGGTCGTAACCACAGCAACAGACTTCTATACACTTCAGAGGTGCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| 3UTR-3UTR CAA 90 bp | CAGCAACATCCACAATGGAACAGTCTGCTCTGTCTGATCCGTAGTGGCTTTTCTCTGTGGTTACGACCTTaGTTTCCAGTGATGCTTGGT | + |
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Preference number: 3 (lower is better) Translates to: QQHPQWNSLLCLIRSGFSLWLRP*FPVMLG Trigger: ACCAAGCATCACTGGAAACAAAGGTCGTAACCACAG...AGAAAAGCCACTACGGATCAGACAGAGCAGACTGTTCCATTGTGGATGTTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| 3UTR CCA 72 bp | GTTGCTGTGGTTACGACCTTTGTTTCCAGTGATGCTTaGTCCGTGCTTTCCCCTACCTTTAACAATGGTTAC | + |
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Preference number: 3 (lower is better) Translates to: VAVVTTFVSSDA*SVLSPTFNNGY Trigger: GTAACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGAAACAAAGGTCGTAACCACAGCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| 3UTR CCA 72 bp | GTAGCTAGATCCCCAAATCAACAGCAACATCCACAATaGAACAGTCTGCTCTGTCTGATCCGTAGTGGCTTT | + |
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Preference number: 3 (lower is better) Translates to: VARSPNQQQHPQ*NSLLCLIRSGF Trigger: AAAGCCACTACGGATCAGACAGAGCAGACTGTTCCATTGTGGATGTTGCTGTTGATTTGGGGATCTAGCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| 3UTR-3UTR CAA 90 bp | AGTCTGTTGCTGTGGTTACGACCTTTGTTTCCAGTGATGCTTGGTCCGTGCTTTATTAAAAATCGTGCATaGTCCGCACAGCACAGATTT | + |
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Preference number: 3 (lower is better) Translates to: SLLLWLRPLFPVMLGPCFIKNRA*SAQHRF Trigger: AAATCTGTGCTGTGCGGACAATGCACGATTTTTAAT...AAAGCACGGACCAAGCATCACTGGAAACAAAGGTCGTAACCACAGCAACAGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| 3UTR GCA 72 bp | TGGTTACGACCTTTGTTTCCAGTGATGCTTGGTCCGTaGTTTCCCCTACCTTTAACAATGGTTACTCAAAAG | + |
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Preference number: 3 (lower is better) Translates to: WLRPLFPVMLGP*FPLPLTMVTQK Trigger: CTTTTGAGTAACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGAAACAAAGGTCGTAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| 3UTR GCA 72 bp | GGAGATGTATCAGGGGTTTTTCTTTGTCACTTTAGCTaGACCTCTGAAGTGTATAGAAGTCTGTTGCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: GDVSGVFLCHFS*TSEVYRSLLLW Trigger: CCACAGCAACAGACTTCTATACACTTCAGAGGTGCAGCTAAAGTGACAAAGAAAAACCCCTGATACATCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR TCA 90 bp | TCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACAATGGTTACTCAAAATCCGGTGCCTTCGCATaGGGGAGCGCTGCTGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SSDAWSVLSPTFNNGYSKSGAFA*GSAAAA Trigger: AGCTGCAGCAGCGCTCCCTCATGCGAAGGCACCGGA...TTTTGAGTAACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR GCA 90 bp | ACCTTTGTTTCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACAATGGTGGAGGCTTGCTCTCGTaGTTCGGCCTGGGGAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: TFVSSDAWSVLSPTFNNGGGLLS*FGLGSL Trigger: CAAGCTCCCCAGGCCGAAGCACGAGAGCAAGCCTCC...ACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGAAACAAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR GCA 90 bp | AGCACGGTAATGATTAAAAATCGTGCATTGTCCGCACAGCACAGATTTCAGAGTGGGGCAGAGGAGGCTTaGTCTCGTGCTTCGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: STVMIKNRALSAQHRFQSGAEEA*SRASAW Trigger: CCAGGCCGAAGCACGAGAGCAAGCCTCCTCTGCCCC...ACTCTGAAATCTGTGCTGTGCGGACAATGCACGATTTTTAATCATTACCGTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR GCA 90 bp | CGGCTCCAGCACATCTATCCTGAAAGGACCGGATGTATAAAGTTCTTTCTTAGAGCTGCAGCTGCTTCATaGTCGCGGGGTACCGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: RLQHIYPERTGCIKFFLRAAAAS*SRGTAS Trigger: GGAAGCGGTACCCCGCGAGCATGAAGCAGCTGCAGC...TCTAAGAAAGAACTTTATACATCCGGTCCTTTCAGGATAGATGTGCTGGAGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR GCA 90 bp | ACCTTTGTTTCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACAATGGTCGCATGAGGGAGCGCTaGTGCAGCTGCTTCATGCTC | + |
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Preference number: 4 (lower is better) Translates to: TFVSSDAWSVLSPTFNNGRMRER*CSCFML Trigger: GAGCATGAAGCAGCTGCAGCAGCGCTCCCTCATGCG...ACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGAAACAAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR CCA 90 bp | TCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACAATGGTTACTCAAAAGCTTGGGGAGGGCCCTaGCCAGGTCAAACCTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: SSDAWSVLSPTFNNGYSKAWGGP*PGQTSL Trigger: CAGAGAGGTTTGACCTGGCCAGGGCCCTCCCCAAGC...TTTTGAGTAACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR TCA 90 bp | AGTCTGTTGCTGTGGTTACGACCTTTGTTTCCAGTGATGCTTGGTCCGTGCTTTCCACGCTGCCCGCGATaGTCTTATGGAAGGAGATGT | + |
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Preference number: 4 (lower is better) Translates to: SLLLWLRPLFPVMLGPCFPRCPR*SYGRRC Trigger: ACATCTCCTTCCATAAGATCATCGCGGGCAGCGTGG...AAAGCACGGACCAAGCATCACTGGAAACAAAGGTCGTAACCACAGCAACAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR TCA 90 bp | AGTCTGTTGCTGTGGTTACGACCTTTGTTTCCAGTGATGCTTGGTCCGTGCTTTACTGATGCGGCCAGCTaGCGTGATTGTGCTCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: SLLLWLRPLFPVMLGPCFTDAAS*RDCAQV Trigger: GACTTGAGCACAATCACGTCAGCTGGCCGCATCAGT...AAAGCACGGACCAAGCATCACTGGAAACAAAGGTCGTAACCACAGCAACAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR GCA 90 bp | CAGCAACATCCACAATGGAACAGTCTGCTCTGTCTGATCCGTAGTGGCTTTTCTATCACGTTAACCCCCTaGAGCTCTTTGGGACTGGCG | + |
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Preference number: 4 (lower is better) Translates to: QQHPQWNSLLCLIRSGFSITLTP*SSLGLA Trigger: CGCCAGTCCCAAAGAGCTGCAGGGGGTTAACGTGAT...AGAAAAGCCACTACGGATCAGACAGAGCAGACTGTTCCATTGTGGATGTTGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR GCA 90 bp | AGCACGGTAATGATTAAAAATCGTGCATTGTCCGCACAGCACAGATTTCAGAGTGAGCGCTGCTGCAGCTaGTTCATGCTCGCGGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: STVMIKNRALSAQHRFQSERCCS*FMLAGY Trigger: GTACCCCGCGAGCATGAAGCAGCTGCAGCAGCGCTC...ACTCTGAAATCTGTGCTGTGCGGACAATGCACGATTTTTAATCATTACCGTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR CCA 90 bp | CAGCAACATCCACAATGGAACAGTCTGCTCTGTCTGATCCGTAGTGGCTTTTCTAGGTTGCGACAGTCTTaGAAGATCCGCACCGGGATG | + |
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Preference number: 4 (lower is better) Translates to: QQHPQWNSLLCLIRSGFSRLRQS*KIRTGM Trigger: CATCCCGGTGCGGATCTTCCAAGACTGTCGCAACCT...AGAAAAGCCACTACGGATCAGACAGAGCAGACTGTTCCATTGTGGATGTTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR CCA 90 bp | TCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACAATGGTTACTCAAAAGTCCACATCTGTCTCTaGGCTGGGCTCGGTAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SSDAWSVLSPTFNNGYSKVHICL*AGLGSS Trigger: GGAGCTACCGAGCCCAGCCCAGAGACAGATGTGGAC...TTTTGAGTAACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR CCA 90 bp | AGTCTGTTGCTGTGGTTACGACCTTTGTTTCCAGTGATGCTTGGTCCGTGCTTTGCCAGCTGTGGTTTATaGTCACTGATGCGGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SLLLWLRPLFPVMLGPCFASCGL*SLMRPA Trigger: AGCTGGCCGCATCAGTGACCATAAACCACAGCTGGC...AAAGCACGGACCAAGCATCACTGGAAACAAAGGTCGTAACCACAGCAACAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR GCA 90 bp | AGCACGGTAATGATTAAAAATCGTGCATTGTCCGCACAGCACAGATTTCAGAGTATGAGGGAGCGCTGCTaGAGCTGCTTCATGCTCGCG | + |
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Preference number: 4 (lower is better) Translates to: STVMIKNRALSAQHRFQSMRERC*SCFMLA Trigger: CGCGAGCATGAAGCAGCTGCAGCAGCGCTCCCTCAT...ACTCTGAAATCTGTGCTGTGCGGACAATGCACGATTTTTAATCATTACCGTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR GCA 90 bp | TCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACAATGGTTACTCAAAACGTTTCTTCTTCCGGTaGCTTCGCATGAGGGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: SSDAWSVLSPTFNNGYSKRFFFR*LRMRER Trigger: GCGCTCCCTCATGCGAAGGCACCGGAAGAAGAAACG...TTTTGAGTAACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR GCA 90 bp | TCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACAATGGTTACTCAAAACCCTGGAGCCTGATTTaGTATAGGTGCAGGGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: SSDAWSVLSPTFNNGYSKPWSLI*YRCRVP Trigger: CGGGACCCTGCACCTATAGCAAATCAGGCTCCAGGG...TTTTGAGTAACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR TCA 90 bp | ACCTTTGTTTCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACAATGGTAGACACTGGGTCCGCTaGAGGCTTCGATCTCATTAC | + |
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Preference number: 4 (lower is better) Translates to: TFVSSDAWSVLSPTFNNGRHWVR*RLRSHY Trigger: GTAATGAGATCGAAGCCTTCAGCGGACCCAGTGTCT...ACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGAAACAAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR GCA 90 bp | AGTCTGTTGCTGTGGTTACGACCTTTGTTTCCAGTGATGCTTGGTCCGTGCTTTCTGATTTGCTATAGGTaGAGGGTCCCGTTCCGTTCA | + |
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Preference number: 4 (lower is better) Translates to: SLLLWLRPLFPVMLGPCFLICYR*RVPFRS Trigger: TGAACGGAACGGGACCCTGCACCTATAGCAAATCAG...AAAGCACGGACCAAGCATCACTGGAAACAAAGGTCGTAACCACAGCAACAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR CCA 90 bp | AGCACGGTAATGATTAAAAATCGTGCATTGTCCGCACAGCACAGATTTCAGAGTAAGGCTCACCAGCCTTaGGAACAGGGCCAGGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: STVMIKNRALSAQHRFQSKAHQP*EQGQVE Trigger: CTCAACCTGGCCCTGTTCCCAAGGCTGGTGAGCCTT...ACTCTGAAATCTGTGCTGTGCGGACAATGCACGATTTTTAATCATTACCGTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR CCA 90 bp | ACCTTTGTTTCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACAATGGTCCCGCGATGATCTTATaGAAGGAGATGTGCTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: TFVSSDAWSVLSPTFNNGPAMIL*KEMCSV Trigger: CACGGAGCACATCTCCTTCCATAAGATCATCGCGGG...ACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGAAACAAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR CCA 90 bp | CAGCAACATCCACAATGGAACAGTCTGCTCTGTCTGATCCGTAGTGGCTTTTCTAAATTCCTGGGTGCCTaGAGTCATCTGCTTGAGCGA | + |
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Preference number: 4 (lower is better) Translates to: QQHPQWNSLLCLIRSGFSKFLGA*SHLLER Trigger: TCGCTCAAGCAGATGACTCCAGGCACCCAGGAATTT...AGAAAAGCCACTACGGATCAGACAGAGCAGACTGTTCCATTGTGGATGTTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR CCA 90 bp | TCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACAATGGTTACTCAAAATCAGCAGCATCTCGCTaGTCTCCGTGTTGGTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: SSDAWSVLSPTFNNGYSKSAASR*SPCWWV Trigger: AACCCACCAACACGGAGACCAGCGAGATGCTGCTGA...TTTTGAGTAACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR TCA 90 bp | TCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACAATGGTTACTCAAAATGCATGTACAAGTTCTaGAGGCTCACCAGCCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: SSDAWSVLSPTFNNGYSKCMYKF*RLTSLG Trigger: CCCAAGGCTGGTGAGCCTTCAGAACTTGTACATGCA...TTTTGAGTAACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR TCA 90 bp | TCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACAATGGTTACTCAAAAACATTCCCTGGAGCCTaGTTTGCTATAGGTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SSDAWSVLSPTFNNGYSKTFPGA*FAIGAG Trigger: CCCTGCACCTATAGCAAATCAGGCTCCAGGGAATGT...TTTTGAGTAACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR GCA 90 bp | ACCTTTGTTTCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACAATGGTCCAGAAGTTCCAGGTTaGGACAGTCTTGGAAGATCC | + |
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Preference number: 4 (lower is better) Translates to: TFVSSDAWSVLSPTFNNGPEVPG*DSLGRS Trigger: GGATCTTCCAAGACTGTCGCAACCTGGAACTTCTGG...ACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGAAACAAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR GCA 90 bp | CGGCTCCAGCACATCTATCCTGAAAGGACCGGATGTATAAAGTTCTTTCTTAGATCCAGGTTGAGGCGTTaGAGATTGGGAACACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLQHIYPERTGCIKFFLRSRLRR*RLGTHW Trigger: CCAGTGTGTTCCCAATCTGCAACGCCTCAACCTGGA...TCTAAGAAAGAACTTTATACATCCGGTCCTTTCAGGATAGATGTGCTGGAGCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR CCA 90 bp | CAGCAACATCCACAATGGAACAGTCTGCTCTGTCTGATCCGTAGTGGCTTTTCTTTGTCAGTAAGACAGTaGGTGCTAGAACCACCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: QQHPQWNSLLCLIRSGFSLSVRQ*VLEPPL Trigger: TAGCGGTGGTTCTAGCACCCACTGTCTTACTGACAA...AGAAAAGCCACTACGGATCAGACAGAGCAGACTGTTCCATTGTGGATGTTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTGTTGCTGTGGTTACGACCTTTGTTTCCAGTGATGCTTGGTCCGTGCTTTCAGCAAAGACATTCCTaGCTAAACTTCGGATCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLLLWLRPLFPVMLGPCFQQRHS*LNFGSG Trigger: ACCGGATCCGAAGTTTAGCCAGGAATGTCTTTGCTG...AAAGCACGGACCAAGCATCACTGGAAACAAAGGTCGTAACCACAGCAACAGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR CCA 90 bp | CGGCTCCAGCACATCTATCCTGAAAGGACCGGATGTATAAAGTTCTTTCTTAGAAGATTGGGAACACACTaGAAGACACTGGGTCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLQHIYPERTGCIKFFLRRLGTH*KTLGPL Trigger: CAGCGGACCCAGTGTCTTCCAGTGTGTTCCCAATCT...TCTAAGAAAGAACTTTATACATCCGGTCCTTTCAGGATAGATGTGCTGGAGCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR TCA 90 bp | ACCTTTGTTTCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACAATGGTGGAACAGGGCCAGGTTaGGCTTGGAAAATTGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: TFVSSDAWSVLSPTFNNGGTGPG*AWKIDC Trigger: ACAATCAATTTTCCAAGCTCAACCTGGCCCTGTTCC...ACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGAAACAAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACAATGGTTACTCAAAATGTTGGAATCCAGGTTaGGGCGTTGCAGATTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSDAWSVLSPTFNNGYSKCWNPG*GVADWE Trigger: TTCCCAATCTGCAACGCCTCAACCTGGATTCCAACA...TTTTGAGTAACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACAATGGTTACTCAAAACTGGAGTCATCTGCTTaGGCGATTGCCGTTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSDAWSVLSPTFNNGYSKLESSA*AIAVSS Trigger: AGAAGAAACGGCAATCGCTCAAGCAGATGACTCCAG...TTTTGAGTAACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| 3UTR CAA 72 bp | GAAGTGTATAGAAGTCTGTTGCTGTGGTTACGACCTTaGTTTCCAGTGATGCTTGGTCCGTGCTTTCCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: EVYRSLLLWLRP*FPVMLGPCFPL Trigger: TAGGGGAAAGCACGGACCAAGCATCACTGGAAACAAAGGTCGTAACCACAGCAACAGACTTCTATACACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR GCA 90 bp | TCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACAATGGTTACTCAAAATGCTCTTCCCACAGATaGTGTAGTTCTTCACCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSDAWSVLSPTFNNGYSKCSSHR*CSSSPH Trigger: ATGCGGTGAAGAACTACAGCATCTGTGGGAAGAGCA...TTTTGAGTAACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR CCA 90 bp | AGCACGGTAATGATTAAAAATCGTGCATTGTCCGCACAGCACAGATTTCAGAGTAGCTCAGTCTCTAGGTaGCTTTCCATCGTGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: STVMIKNRALSAQHRFQSSSVSR*LSIVSS Trigger: GGAAGACACGATGGAAAGCCACCTAGAGACTGAGCT...ACTCTGAAATCTGTGCTGTGCGGACAATGCACGATTTTTAATCATTACCGTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR GCA 90 bp | ACCTTTGTTTCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACAATGGTCACAGTATACCATTTTaGCTTCACACCTACAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: TFVSSDAWSVLSPTFNNGHSIPF*LHTYNP Trigger: AGGGTTGTAGGTGTGAAGGCAAAATGGTATACTGTG...ACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGAAACAAAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR CCA 90 bp | CGGCTCCAGCACATCTATCCTGAAAGGACCGGATGTATAAAGTTCTTTCTTAGAGTATCTCACATTCCCTaGAGCCTGATTTGCTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLQHIYPERTGCIKFFLRVSHIP*SLICYR Trigger: CCTATAGCAAATCAGGCTCCAGGGAATGTGAGATAC...TCTAAGAAAGAACTTTATACATCCGGTCCTTTCAGGATAGATGTGCTGGAGCCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| 3UTR CAA 72 bp | CACTTTAGCTGCACCTCTGAAGTGTATAGAAGTCTGTaGCTGTGGTTACGACCTTTGTTTCCAGTGATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HFSCTSEVYRSL*LWLRPLFPVML Trigger: AAGCATCACTGGAAACAAAGGTCGTAACCACAGCAACAGACTTCTATACACTTCAGAGGTGCAGCTAAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR GCA 90 bp | CGGCTCCAGCACATCTATCCTGAAAGGACCGGATGTATAAAGTTCTTTCTTAGACATCGTGTCTTCCTGTaGATTCGTTTCAAAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: RLQHIYPERTGCIKFFLRHRVFL*IRFKGL Trigger: AAGTCCTTTGAAACGAATGCACAGGAAGACACGATG...TCTAAGAAAGAACTTTATACATCCGGTCCTTTCAGGATAGATGTGCTGGAGCCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR CCA 90 bp | AGCACGGTAATGATTAAAAATCGTGCATTGTCCGCACAGCACAGATTTCAGAGTCGCTGGTCTCCGTGTTaGTGGGTTTATAATCTACAT | + |
|
Preference number: 4 (lower is better) Translates to: STVMIKNRALSAQHRFQSRWSPC*WVYNLH Trigger: ATGTAGATTATAAACCCACCAACACGGAGACCAGCG...ACTCTGAAATCTGTGCTGTGCGGACAATGCACGATTTTTAATCATTACCGTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR GCA 90 bp | CGGCTCCAGCACATCTATCCTGAAAGGACCGGATGTATAAAGTTCTTTCTTAGAAACAGATATTCCTGCTaGATTCCCATATATTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLQHIYPERTGCIKFFLRNRYSC*IPIYSQ Trigger: CTGGGAATATATGGGAATGCAGCAGGAATATCTGTT...TCTAAGAAAGAACTTTATACATCCGGTCCTTTCAGGATAGATGTGCTGGAGCCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR GCA 90 bp | AGCACGGTAATGATTAAAAATCGTGCATTGTCCGCACAGCACAGATTTCAGAGTGGGAACAGATATTCCTaGTGCATTCCCATATATTCC | + |
|
Preference number: 4 (lower is better) Translates to: STVMIKNRALSAQHRFQSGNRYS*CIPIYS Trigger: GGAATATATGGGAATGCAGCAGGAATATCTGTTCCC...ACTCTGAAATCTGTGCTGTGCGGACAATGCACGATTTTTAATCATTACCGTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| 3UTR CAA 72 bp | TATGCAGTAAGCACGGTAATGATTAAAAATCGTGCATaGTCCGCACAGCACAGATTTCAGAGTCAAGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YAVSTVMIKNRA*SAQHRFQSQGF Trigger: GAAACCTTGACTCTGAAATCTGTGCTGTGCGGACAATGCACGATTTTTAATCATTACCGTGCTTACTGCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACAATGGTTACTCAAAATGGTCTCCGTGTTGGTaGGTTTATAATCTACATAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSDAWSVLSPTFNNGYSKWSPCW*VYNLHK Trigger: TTTATGTAGATTATAAACCCACCAACACGGAGACCA...TTTTGAGTAACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS GCA 90 bp | AGCGATTGCCGTTTCTTCTTCCGGTGCCTTCGCATGAGGGAGCGCTaGTGCAGCTGCTTCATGCTCGCGGGGTACCGCTTCCAGGACACG | + |
|
Preference number: 5 (lower is better) Translates to: SDCRFFFRCLRMRER*CSCFMLAGYRFQDT Trigger: CGTGTCCTGGAAGCGGTACCCCGCGAGCATGAAGCAGCTGCAGCAGCGCTCCCTCATGCGAAGGCACCGGAAGAAGAAACGGCAATCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS GCA 90 bp | CGTTTCTTCTTCCGGTGCCTTCGCATGAGGGAGCGCTGCTGCAGCTaGTTCATGCTCGCGGGGTACCGCTTCCAGGACACGTACATCACC | + |
|
Preference number: 5 (lower is better) Translates to: RFFFRCLRMRERCCS*FMLAGYRFQDTYIT Trigger: GGTGATGTACGTGTCCTGGAAGCGGTACCCCGCGAGCATGAAGCAGCTGCAGCAGCGCTCCCTCATGCGAAGGCACCGGAAGAAGAAACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS GCA 90 bp | AGGAAAAGGGCCACGCTGCCCGCGATGATCTTATGGAAGGAGATGTaGTCCGTGTCCACATCTGTCTCTGGGCTGGGCTCGGTAGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RKRATLPAMILWKEM*SVSTSVSGLGSVAP Trigger: GGGAGCTACCGAGCCCAGCCCAGAGACAGATGTGGACACGGAGCACATCTCCTTCCATAAGATCATCGCGGGCAGCGTGGCCCTTTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS CCA 90 bp | ACCAGCACCGACAGGAAAAGGGCCACGCTGCCCGCGATGATCTTATaGAAGGAGATGTGCTCCGTGTCCACATCTGTCTCTGGGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TSTDRKRATLPAMIL*KEMCSVSTSVSGLG Trigger: GCCCAGCCCAGAGACAGATGTGGACACGGAGCACATCTCCTTCCATAAGATCATCGCGGGCAGCGTGGCCCTTTTCCTGTCGGTGCTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS CCA 90 bp | ATCCGGTTGTATCCCAGGTCCAGAAGTTCCAGGTTGCGACAGTCTTaGAAGATCCGCACCGGGATGGTTCTCAGTGAGTTGGAGCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: IRLYPRSRSSRLRQS*KIRTGMVLSELERR Trigger: CCTCCGCTCCAACTCACTGAGAACCATCCCGGTGCGGATCTTCCAAGACTGTCGCAACCTGGAACTTCTGGACCTGGGATACAACCGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR CAA 90 bp | CAGCAACATCCACAATGGAACAGTCTGCTCTGTCTGATCCGTAGTGGCTTTTCTGGGGGCAGAGGAGGCTaGCTCTCGTGCTTCGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QQHPQWNSLLCLIRSGFSGGRGG*LSCFGL Trigger: CAGGCCGAAGCACGAGAGCAAGCCTCCTCTGCCCCC...AGAAAAGCCACTACGGATCAGACAGAGCAGACTGTTCCATTGTGGATGTTGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS GCA 90 bp | CTAAACTTCGGATCCGGTTGTATCCCAGGTCCAGAAGTTCCAGGTTaGGACAGTCTTGGAAGATCCGCACCGGGATGGTTCTCAGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LNFGSGCIPGPEVPG*DSLGRSAPGWFSVS Trigger: ACTCACTGAGAACCATCCCGGTGCGGATCTTCCAAGACTGTCGCAACCTGGAACTTCTGGACCTGGGATACAACCGGATCCGAAGTTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR CAA 90 bp | AGCACGGTAATGATTAAAAATCGTGCATTGTCCGCACAGCACAGATTTCAGAGTGGCTTAAATGTGGGCTaGGGGAGGGCCCTGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: STVMIKNRALSAQHRFQSGLNVG*GRALAR Trigger: CCTGGCCAGGGCCCTCCCCAAGCCCACATTTAAGCC...ACTCTGAAATCTGTGCTGTGCGGACAATGCACGATTTTTAATCATTACCGTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS CCA 90 bp | AGGGTCCCGTTCCGTTCAGCAGCATCTCGCTGGTCTCCGTGTTGGTaGGTTTATAATCTACATAAAATTCCTGGGTGCCTGGAGTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: RVPFRSAASRWSPCW*VYNLHKIPGCLESS Trigger: AGATGACTCCAGGCACCCAGGAATTTTATGTAGATTATAAACCCACCAACACGGAGACCAGCGAGATGCTGCTGAACGGAACGGGACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS CCA 90 bp | CGGCCAGCTGACGTGATTGTGCTCAAGTCCAGCTCAGTCTCTAGGTaGCTTTCCATCGTGTCTTCCTGTGCATTCGTTTCAAAGGACTTA | + |
|
Preference number: 5 (lower is better) Translates to: RPADVIVLKSSSVSR*LSIVSSCAFVSKDL Trigger: TAAGTCCTTTGAAACGAATGCACAGGAAGACACGATGGAAAGCCACCTAGAGACTGAGCTGGACTTGAGCACAATCACGTCAGCTGGCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR CAA 90 bp | ACCTTTGTTTCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACAATGGTCAGGTTGCGACAGTCTaGGAAGATCCGCACCGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TFVSSDAWSVLSPTFNNGQVATV*EDPHRD Trigger: ATCCCGGTGCGGATCTTCCAAGACTGTCGCAACCTG...ACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGAAACAAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR CAA 90 bp | CGGCTCCAGCACATCTATCCTGAAAGGACCGGATGTATAAAGTTCTTTCTTAGATTCGGCCTGGGGAGCTaGGGCTTAAATGTGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RLQHIYPERTGCIKFFLRFGLGS*GLNVGL Trigger: CAAGCCCACATTTAAGCCCAAGCTCCCCAGGCCGAA...TCTAAGAAAGAACTTTATACATCCGGTCCTTTCAGGATAGATGTGCTGGAGCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS TCA 90 bp | GTTTGCCCTATGACACTGATTTTATTCCACTGCATGTACAAGTTCTaGAGGCTCACCAGCCTTGGGAACAGGGCCAGGTTGAGCTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VCPMTLILFHCMYKF*RLTSLGNRARLSLE Trigger: TTCCAAGCTCAACCTGGCCCTGTTCCCAAGGCTGGTGAGCCTTCAGAACTTGTACATGCAGTGGAATAAAATCAGTGTCATAGGGCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR CAA 90 bp | CAGCAACATCCACAATGGAACAGTCTGCTCTGTCTGATCCGTAGTGGCTTTTCTTTGAGGCGTTGCAGATaGGGAACACACTGGAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: QQHPQWNSLLCLIRSGFSLRRCR*GTHWKT Trigger: TGTCTTCCAGTGTGTTCCCAATCTGCAACGCCTCAA...AGAAAAGCCACTACGGATCAGACAGAGCAGACTGTTCCATTGTGGATGTTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR CAA 90 bp | ACCTTTGTTTCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACAATGGTATCCAGGTTGAGGCGTaGCAGATTGGGAACACACTG | + |
|
Preference number: 5 (lower is better) Translates to: TFVSSDAWSVLSPTFNNGIQVEA*QIGNTL Trigger: CAGTGTGTTCCCAATCTGCAACGCCTCAACCTGGAT...ACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGAAACAAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR CAA 90 bp | AGTCTGTTGCTGTGGTTACGACCTTTGTTTCCAGTGATGCTTGGTCCGTGCTTTTTGTTGGAATCCAGGTaGAGGCGTTGCAGATTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLLLWLRPLFPVMLGPCFLLESR*RRCRLG Trigger: TCCCAATCTGCAACGCCTCAACCTGGATTCCAACAA...AAAGCACGGACCAAGCATCACTGGAAACAAAGGTCGTAACCACAGCAACAGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR CAA 90 bp | AGTCTGTTGCTGTGGTTACGACCTTTGTTTCCAGTGATGCTTGGTCCGTGCTTTGCCAGACTGATGTCATaGAGAGAGATCCAAGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: SLLLWLRPLFPVMLGPCFARLMS*REIQES Trigger: GGATTCTTGGATCTCTCTCAATGACATCAGTCTGGC...AAAGCACGGACCAAGCATCACTGGAAACAAAGGTCGTAACCACAGCAACAGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR CAA 90 bp | AGTCTGTTGCTGTGGTTACGACCTTTGTTTCCAGTGATGCTTGGTCCGTGCTTTTCACAGTATACCATTTaGCCTTCACACCTACAACCC | + |
|
Preference number: 5 (lower is better) Translates to: SLLLWLRPLFPVMLGPCFSQYTI*PSHLQP Trigger: GGGTTGTAGGTGTGAAGGCAAAATGGTATACTGTGA...AAAGCACGGACCAAGCATCACTGGAAACAAAGGTCGTAACCACAGCAACAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR CAA 90 bp | CAGCAACATCCACAATGGAACAGTCTGCTCTGTCTGATCCGTAGTGGCTTTTCTCTCAGAATCAACTCTTaGAGTCTGCGTATCCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: QQHPQWNSLLCLIRSGFSLRINS*SLRIPL Trigger: CAATGGGATACGCAGACTCAAAGAGTTGATTCTGAG...AGAAAAGCCACTACGGATCAGACAGAGCAGACTGTTCCATTGTGGATGTTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR CAA 90 bp | ACCTTTGTTTCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACAATGGTTCCAAGTTCCGTAAATaGGTCACAGGTCTGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TFVSSDAWSVLSPTFNNGSKFRK*VTGLKV Trigger: CACCTTCAGACCTGTGACCAATTTACGGAACTTGGA...ACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGAAACAAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR CAA 90 bp | CGGCTCCAGCACATCTATCCTGAAAGGACCGGATGTATAAAGTTCTTTCTTAGATCCAGAAGTTCCAGGTaGCGACAGTCTTGGAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: RLQHIYPERTGCIKFFLRSRSSR*RQSWKI Trigger: GATCTTCCAAGACTGTCGCAACCTGGAACTTCTGGA...TCTAAGAAAGAACTTTATACATCCGGTCCTTTCAGGATAGATGTGCTGGAGCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACAATGGTTACTCAAAAAAACTTCGGATCCGGTaGTATCCCAGGTCCAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSDAWSVLSPTFNNGYSKKLRIR*YPRSRS Trigger: ACTTCTGGACCTGGGATACAACCGGATCCGAAGTTT...TTTTGAGTAACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGA 47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR CAA 90 bp | ACCTTTGTTTCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACAATGGTGGTCCAGGACATGGTTaGCCCTATGACACTGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: TFVSSDAWSVLSPTFNNGGPGHG*PYDTDF Trigger: AAAATCAGTGTCATAGGGCAAACCATGTCCTGGACC...ACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGAAACAAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR CAA 90 bp | CAGCAACATCCACAATGGAACAGTCTGCTCTGTCTGATCCGTAGTGGCTTTTCTCCAATAAATGTGAGCTaGTTGGAATCCAGGTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QQHPQWNSLLCLIRSGFSPINVS*LESRLR Trigger: CCTCAACCTGGATTCCAACAAGCTCACATTTATTGG...AGAAAAGCCACTACGGATCAGACAGAGCAGACTGTTCCATTGTGGATGTTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR CAA 90 bp | AGCACGGTAATGATTAAAAATCGTGCATTGTCCGCACAGCACAGATTTCAGAGTCATCTGCTTGAGCGATaGCCGTTTCTTCTTCCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: STVMIKNRALSAQHRFQSHLLER*PFLLPV Trigger: CACCGGAAGAAGAAACGGCAATCGCTCAAGCAGATG...ACTCTGAAATCTGTGCTGTGCGGACAATGCACGATTTTTAATCATTACCGTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR CAA 90 bp | CGGCTCCAGCACATCTATCCTGAAAGGACCGGATGTATAAAGTTCTTTCTTAGACCCCACAGTAACTTATaGTGGGCTGGTCATATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RLQHIYPERTGCIKFFLRPHSNL*WAGHMP Trigger: TGGCATATGACCAGCCCACAATAAGTTACTGTGGGG...TCTAAGAAAGAACTTTATACATCCGGTCCTTTCAGGATAGATGTGCTGGAGCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACAATGGTTACTCAAAAAGTCTGCGTATCCCATaGAAAGCATTCTCGTCGATA | + |
|
Preference number: 5 (lower is better) Translates to: SSDAWSVLSPTFNNGYSKSLRIP*KAFSSI Trigger: TATCGACGAGAATGCTTTCAATGGGATACGCAGACT...TTTTGAGTAACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CCA 90 bp | ACTTATGGGAGAGGAGTTCATGATGGACCCCACAGTAACTTATTGTaGGCTGGTCATATGCCAGAAAGGTTGACACATTCATTGATAAAG | + |
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Preference number: 5 (lower is better) Translates to: TYGRGVHDGPHSNLL*AGHMPERLTHSLIK Trigger: CTTTATCAATGAATGTGTCAACCTTTCTGGCATATGACCAGCCCACAATAAGTTACTGTGGGGTCCATCATGAACTCCTCTCCCATAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR CAA 90 bp | AGTCTGTTGCTGTGGTTACGACCTTTGTTTCCAGTGATGCTTGGTCCGTGCTTTATTATACTTAAGTTTTaGGAGGCTGTTGTAGCGAAG | + |
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Preference number: 5 (lower is better) Translates to: SLLLWLRPLFPVMLGPCFIILKF*EAVVAK Trigger: CTTCGCTACAACAGCCTCCAAAAACTTAAGTATAAT...AAAGCACGGACCAAGCATCACTGGAAACAAAGGTCGTAACCACAGCAACAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR CAA 90 bp | AGCACGGTAATGATTAAAAATCGTGCATTGTCCGCACAGCACAGATTTCAGAGTATAAATGTGAGCTTGTaGGAATCCAGGTTGAGGCGT | + |
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Preference number: 5 (lower is better) Translates to: STVMIKNRALSAQHRFQSINVSL*ESRLRR Trigger: ACGCCTCAACCTGGATTCCAACAAGCTCACATTTAT...ACTCTGAAATCTGTGCTGTGCGGACAATGCACGATTTTTAATCATTACCGTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS-3UTR CAA 90 bp | ACCTTTGTTTCCAGTGATGCTTGGTCCGTGCTTTCCCCTACCTTTAACAATGGTAGAATCCAGAATCTCTaGTCCAATAAATGTGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: TFVSSDAWSVLSPTFNNGRIQNL*SNKCEL Trigger: AAGCTCACATTTATTGGACAAGAGATTCTGGATTCT...ACCATTGTTAAAGGTAGGGGAAAGCACGGACCAAGCATCACTGGAAACAAAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS GCA 72 bp | TTCCGGTGCCTTCGCATGAGGGAGCGCTGCTGCAGCTaGTTCATGCTCGCGGGGTACCGCTTCCAGGACACG | + |
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Preference number: 6 (lower is better) Translates to: FRCLRMRERCCS*FMLAGYRFQDT Trigger: CGTGTCCTGGAAGCGGTACCCCGCGAGCATGAAGCAGCTGCAGCAGCGCTCCCTCATGCGAAGGCACCGGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CAA 72 bp | AGAGGAGGCTTGCTCTCGTGCTTCGGCCTGGGGAGCTaGGGCTTAAATGTGGGCTTGGGGAGGGCCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: RGGLLSCFGLGS*GLNVGLGRALA Trigger: GGCCAGGGCCCTCCCCAAGCCCACATTTAAGCCCAAGCTCCCCAGGCCGAAGCACGAGAGCAAGCCTCCTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS TCA 72 bp | GGTACCGCTTCCAGGACACGTACATCACCAGGAGGATaGCCAGCACCGACAGGAAAAGGGCCACGCTGCCCG | + |
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Preference number: 6 (lower is better) Translates to: GTASRTRTSPGG*PAPTGKGPRCP Trigger: CGGGCAGCGTGGCCCTTTTCCTGTCGGTGCTGGTCATCCTCCTGGTGATGTACGTGTCCTGGAAGCGGTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS GCA 72 bp | TTCTTCTTCCGGTGCCTTCGCATGAGGGAGCGCTGCTaGAGCTGCTTCATGCTCGCGGGGTACCGCTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: FFFRCLRMRERC*SCFMLAGYRFQ Trigger: CTGGAAGCGGTACCCCGCGAGCATGAAGCAGCTGCAGCAGCGCTCCCTCATGCGAAGGCACCGGAAGAAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS GCA 72 bp | CGTTTCTTCTTCCGGTGCCTTCGCATGAGGGAGCGCTaGTGCAGCTGCTTCATGCTCGCGGGGTACCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: RFFFRCLRMRER*CSCFMLAGYRF Trigger: GAAGCGGTACCCCGCGAGCATGAAGCAGCTGCAGCAGCGCTCCCTCATGCGAAGGCACCGGAAGAAGAAACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CAA 72 bp | TGCTTCGGCCTGGGGAGCTTGGGCTTAAATGTGGGCTaGGGGAGGGCCCTGGCCAGGTCAAACCTCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: CFGLGSLGLNVG*GRALARSNLSV Trigger: CACAGAGAGGTTTGACCTGGCCAGGGCCCTCCCCAAGCCCACATTTAAGCCCAAGCTCCCCAGGCCGAAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CAA 90 bp | TTGCTCTCGTGCTTCGGCCTGGGGAGCTTGGGCTTAAATGTGGGCTaGGGGAGGGCCCTGGCCAGGTCAAACCTCTCTGTGGTAGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: LLSCFGLGSLGLNVG*GRALARSNLSVVVL Trigger: GAGCACTACCACAGAGAGGTTTGACCTGGCCAGGGCCCTCCCCAAGCCCACATTTAAGCCCAAGCTCCCCAGGCCGAAGCACGAGAGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS GCA 72 bp | GCCACGCTGCCCGCGATGATCTTATGGAAGGAGATGTaGTCCGTGTCCACATCTGTCTCTGGGCTGGGCTCG | + |
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Preference number: 6 (lower is better) Translates to: ATLPAMILWKEM*SVSTSVSGLGS Trigger: CGAGCCCAGCCCAGAGACAGATGTGGACACGGAGCACATCTCCTTCCATAAGATCATCGCGGGCAGCGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS TCA 72 bp | CCAGCACCGACAGGAAAAGGGCCACGCTGCCCGCGATaGTCTTATGGAAGGAGATGTGCTCCGTGTCCACAT | + |
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Preference number: 6 (lower is better) Translates to: PAPTGKGPRCPR*SYGRRCAPCPH Trigger: ATGTGGACACGGAGCACATCTCCTTCCATAAGATCATCGCGGGCAGCGTGGCCCTTTTCCTGTCGGTGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS GCA 72 bp | GGATCCGGTTGTATCCCAGGTCCAGAAGTTCCAGGTTaGGACAGTCTTGGAAGATCCGCACCGGGATGGTTC | + |
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Preference number: 6 (lower is better) Translates to: GSGCIPGPEVPG*DSLGRSAPGWF Trigger: GAACCATCCCGGTGCGGATCTTCCAAGACTGTCGCAACCTGGAACTTCTGGACCTGGGATACAACCGGATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CAA 72 bp | CGGATCCGGTTGTATCCCAGGTCCAGAAGTTCCAGGTaGCGACAGTCTTGGAAGATCCGCACCGGGATGGTT | + |
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Preference number: 6 (lower is better) Translates to: RIRLYPRSRSSR*RQSWKIRTGMV Trigger: AACCATCCCGGTGCGGATCTTCCAAGACTGTCGCAACCTGGAACTTCTGGACCTGGGATACAACCGGATCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CAA 90 bp | TTGCGACAGTCTTGGAAGATCCGCACCGGGATGGTTCTCAGTGAGTaGGAGCGGAGGTGTAAACTAAGCAGCTTCCTCAAGCCCCGGAAC | + |
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Preference number: 6 (lower is better) Translates to: LRQSWKIRTGMVLSE*ERRCKLSSFLKPRN Trigger: GTTCCGGGGCTTGAGGAAGCTGCTTAGTTTACACCTCCGCTCCAACTCACTGAGAACCATCCCGGTGCGGATCTTCCAAGACTGTCGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CCA 72 bp | GACAGGAAAAGGGCCACGCTGCCCGCGATGATCTTATaGAAGGAGATGTGCTCCGTGTCCACATCTGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: DRKRATLPAMIL*KEMCSVSTSVS Trigger: AGAGACAGATGTGGACACGGAGCACATCTCCTTCCATAAGATCATCGCGGGCAGCGTGGCCCTTTTCCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CAA 90 bp | GCTAAACTTCGGATCCGGTTGTATCCCAGGTCCAGAAGTTCCAGGTaGCGACAGTCTTGGAAGATCCGCACCGGGATGGTTCTCAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: AKLRIRLYPRSRSSR*RQSWKIRTGMVLSE Trigger: CTCACTGAGAACCATCCCGGTGCGGATCTTCCAAGACTGTCGCAACCTGGAACTTCTGGACCTGGGATACAACCGGATCCGAAGTTTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CCA 72 bp | TATCCCAGGTCCAGAAGTTCCAGGTTGCGACAGTCTTaGAAGATCCGCACCGGGATGGTTCTCAGTGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: YPRSRSSRLRQS*KIRTGMVLSEL Trigger: CAACTCACTGAGAACCATCCCGGTGCGGATCTTCCAAGACTGTCGCAACCTGGAACTTCTGGACCTGGGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CCA 72 bp | GAATCCAGGTTGAGGCGTTGCAGATTGGGAACACACTaGAAGACACTGGGTCCGCTGAAGGCTTCGATCTCA | + |
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Preference number: 6 (lower is better) Translates to: ESRLRRCRLGTH*KTLGPLKASIS Trigger: TGAGATCGAAGCCTTCAGCGGACCCAGTGTCTTCCAGTGTGTTCCCAATCTGCAACGCCTCAACCTGGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CAA 72 bp | TCTTGGAAGATCCGCACCGGGATGGTTCTCAGTGAGTaGGAGCGGAGGTGTAAACTAAGCAGCTTCCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: SWKIRTGMVLSE*ERRCKLSSFLK Trigger: CTTGAGGAAGCTGCTTAGTTTACACCTCCGCTCCAACTCACTGAGAACCATCCCGGTGCGGATCTTCCAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CAA 72 bp | CCAGCAAAGACATTCCTGGCTAAACTTCGGATCCGGTaGTATCCCAGGTCCAGAAGTTCCAGGTTGCGACAG | + |
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Preference number: 6 (lower is better) Translates to: PAKTFLAKLRIR*YPRSRSSRLRQ Trigger: CTGTCGCAACCTGGAACTTCTGGACCTGGGATACAACCGGATCCGAAGTTTAGCCAGGAATGTCTTTGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CAA 90 bp | CTCTTGTCCAATAAATGTGAGCTTGTTGGAATCCAGGTTGAGGCGTaGCAGATTGGGAACACACTGGAAGACACTGGGTCCGCTGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: LLSNKCELVGIQVEA*QIGNTLEDTGSAEG Trigger: GCCTTCAGCGGACCCAGTGTCTTCCAGTGTGTTCCCAATCTGCAACGCCTCAACCTGGATTCCAACAAGCTCACATTTATTGGACAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS TCA 72 bp | CTACATAAAATTCCTGGGTGCCTGGAGTCATCTGCTTaGGCGATTGCCGTTTCTTCTTCCGGTGCCTTCGCA | + |
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Preference number: 6 (lower is better) Translates to: LHKIPGCLESSA*AIAVSSSGAFA Trigger: TGCGAAGGCACCGGAAGAAGAAACGGCAATCGCTCAAGCAGATGACTCCAGGCACCCAGGAATTTTATGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CCA 72 bp | CTCGTTCAGCAGAAGAAAGCATTGTCAGTAAGACAGTaGGTGCTAGAACCACCGCTACAGCTGATCCTCGCA | + |
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Preference number: 6 (lower is better) Translates to: LVQQKKALSVRQ*VLEPPLQLILA Trigger: TGCGAGGATCAGCTGTAGCGGTGGTTCTAGCACCCACTGTCTTACTGACAATGCTTTCTTCTGCTGAACGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CCA 72 bp | AGGTGCAGGGTCCCGTTCCGTTCAGCAGCATCTCGCTaGTCTCCGTGTTGGTGGGTTTATAATCTACATAAA | + |
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Preference number: 6 (lower is better) Translates to: RCRVPFRSAASR*SPCWWVYNLHK Trigger: TTTATGTAGATTATAAACCCACCAACACGGAGACCAGCGAGATGCTGCTGAACGGAACGGGACCCTGCACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CAA 72 bp | TTCACCGCATCGATCACGTTAACCCCCTGCAGCTCTTaGGGACTGGCGCAGATGATTGTATTCTCTCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: FTASITLTPCSS*GLAQMIVFSLR Trigger: TCTGAGAGAGAATACAATCATCTGCGCCAGTCCCAAAGAGCTGCAGGGGGTTAACGTGATCGATGCGGTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CCA 72 bp | CCACTGCATGTACAAGTTCTGAAGGCTCACCAGCCTTaGGAACAGGGCCAGGTTGAGCTTGGAAAATTGATT | + |
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Preference number: 6 (lower is better) Translates to: PLHVQVLKAHQP*EQGQVELGKLI Trigger: AATCAATTTTCCAAGCTCAACCTGGCCCTGTTCCCAAGGCTGGTGAGCCTTCAGAACTTGTACATGCAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CCA 72 bp | GACGTGATTGTGCTCAAGTCCAGCTCAGTCTCTAGGTaGCTTTCCATCGTGTCTTCCTGTGCATTCGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: DVIVLKSSSVSR*LSIVSSCAFVS Trigger: TGAAACGAATGCACAGGAAGACACGATGGAAAGCCACCTAGAGACTGAGCTGGACTTGAGCACAATCACGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CAA 90 bp | TCCAGAATCTCTTGTCCAATAAATGTGAGCTTGTTGGAATCCAGGTaGAGGCGTTGCAGATTGGGAACACACTGGAAGACACTGGGTCCG | + |
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Preference number: 6 (lower is better) Translates to: SRISCPINVSLLESR*RRCRLGTHWKTLGP Trigger: CGGACCCAGTGTCTTCCAGTGTGTTCCCAATCTGCAACGCCTCAACCTGGATTCCAACAAGCTCACATTTATTGGACAAGAGATTCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CAA 72 bp | GGGAGAGGAGTTCATGATGGACCCCACAGTAACTTATaGTGGGCTGGTCATATGCCAGAAAGGTTGACACAT | + |
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Preference number: 6 (lower is better) Translates to: GRGVHDGPHSNL*WAGHMPERLTH Trigger: ATGTGTCAACCTTTCTGGCATATGACCAGCCCACAATAAGTTACTGTGGGGTCCATCATGAACTCCTCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CAA 90 bp | GGACCCCACAGTAACTTATTGTGGGCTGGTCATATGCCAGAAAGGTaGACACATTCATTGATAAAGGTATCTCACATTCCCTGGAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: GPHSNLLWAGHMPER*THSLIKVSHIPWSL Trigger: CAGGCTCCAGGGAATGTGAGATACCTTTATCAATGAATGTGTCAACCTTTCTGGCATATGACCAGCCCACAATAAGTTACTGTGGGGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CAA 90 bp | GAGATCCAAGAATCCAGAATCTCTTGTCCAATAAATGTGAGCTTGTaGGAATCCAGGTTGAGGCGTTGCAGATTGGGAACACACTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: EIQESRISCPINVSL*ESRLRRCRLGTHWK Trigger: CTTCCAGTGTGTTCCCAATCTGCAACGCCTCAACCTGGATTCCAACAAGCTCACATTTATTGGACAAGAGATTCTGGATTCTTGGATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CAA 90 bp | AGAGAGATCCAAGAATCCAGAATCTCTTGTCCAATAAATGTGAGCTaGTTGGAATCCAGGTTGAGGCGTTGCAGATTGGGAACACACTGG | + |
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Preference number: 6 (lower is better) Translates to: REIQESRISCPINVS*LESRLRRCRLGTHW Trigger: CCAGTGTGTTCCCAATCTGCAACGCCTCAACCTGGATTCCAACAAGCTCACATTTATTGGACAAGAGATTCTGGATTCTTGGATCTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CCA 72 bp | AGAGGAGTTCATGATGGACCCCACAGTAACTTATTGTaGGCTGGTCATATGCCAGAAAGGTTGACACATTCA | + |
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Preference number: 6 (lower is better) Translates to: RGVHDGPHSNLL*AGHMPERLTHS Trigger: TGAATGTGTCAACCTTTCTGGCATATGACCAGCCCACAATAAGTTACTGTGGGGTCCATCATGAACTCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CAA 72 bp | TCTTGTCCAATAAATGTGAGCTTGTTGGAATCCAGGTaGAGGCGTTGCAGATTGGGAACACACTGGAAGACA | + |
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Preference number: 6 (lower is better) Translates to: SCPINVSLLESR*RRCRLGTHWKT Trigger: TGTCTTCCAGTGTGTTCCCAATCTGCAACGCCTCAACCTGGATTCCAACAAGCTCACATTTATTGGACAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CAA 90 bp | AGGACTTATGGGAGAGGAGTTCATGATGGACCCCACAGTAACTTATaGTGGGCTGGTCATATGCCAGAAAGGTTGACACATTCATTGATA | + |
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Preference number: 6 (lower is better) Translates to: RTYGRGVHDGPHSNL*WAGHMPERLTHSLI Trigger: TATCAATGAATGTGTCAACCTTTCTGGCATATGACCAGCCCACAATAAGTTACTGTGGGGTCCATCATGAACTCCTCTCCCATAAGTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CAA 72 bp | GAATCCAGAATCTCTTGTCCAATAAATGTGAGCTTGTaGGAATCCAGGTTGAGGCGTTGCAGATTGGGAACA | + |
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Preference number: 6 (lower is better) Translates to: ESRISCPINVSL*ESRLRRCRLGT Trigger: TGTTCCCAATCTGCAACGCCTCAACCTGGATTCCAACAAGCTCACATTTATTGGACAAGAGATTCTGGATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CAA 72 bp | CAAGAATCCAGAATCTCTTGTCCAATAAATGTGAGCTaGTTGGAATCCAGGTTGAGGCGTTGCAGATTGGGA | + |
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Preference number: 6 (lower is better) Translates to: QESRISCPINVS*LESRLRRCRLG Trigger: TCCCAATCTGCAACGCCTCAACCTGGATTCCAACAAGCTCACATTTATTGGACAAGAGATTCTGGATTCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CAA 72 bp | CTGCATTCCCATATATTCCCAGCCAGACTGATGTCATaGAGAGAGATCCAAGAATCCAGAATCTCTTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: LHSHIFPARLMS*REIQESRISCP Trigger: TGGACAAGAGATTCTGGATTCTTGGATCTCTCTCAATGACATCAGTCTGGCTGGGAATATATGGGAATGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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| CDS CAA 90 bp | ATATTCCTGCTGCATTCCCATATATTCCCAGCCAGACTGATGTCATaGAGAGAGATCCAAGAATCCAGAATCTCTTGTCCAATAAATGTG | + |
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Preference number: 6 (lower is better) Translates to: IFLLHSHIFPARLMS*REIQESRISCPINV Trigger: CACATTTATTGGACAAGAGATTCTGGATTCTTGGATCTCTCTCAATGACATCAGTCTGGCTGGGAATATATGGGAATGCAGCAGGAATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105439.2 |
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