Pregenerated sensors for LRRN4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043110Ensembl transcript IDs: ENSMUST00000049787.3
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGTTCTGGAGCCTCTGCAGGTGGCCAAGGCTGGTTTGTTTAATCTaGTTGCTGGAAGGAAAATCAAGGCCTCAAATGTGTCTGATTTGG | + |
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Preference number: 1 (lower is better) Translates to: KFWSLCRWPRLVCLI*LLEGKSRPQMCLIW Trigger: CCAAATCAGACACATTTGAGGCCTTGATTTTCCTTCCAGCAACCAGATTAAACAAACCAGCCTTGGCCACCTGCAGAGGCTCCAGAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR CCA 90 bp | CCATTTGGAAAGACAGAGGCAGAAGGATCTAAGTTGAGACCAACATaGGTGAAATACAGAAAGACTTGGAAGCAAATTGCCTGTGTCTCA | + |
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Preference number: 1 (lower is better) Translates to: PFGKTEAEGSKLRPT*VKYRKTWKQIACVS Trigger: TGAGACACAGGCAATTTGCTTCCAAGTCTTTCTGTATTTCACCCATGTTGGTCTCAACTTAGATCCTTCTGCCTCTGTCTTTCCAAATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR TCA 90 bp | GCCAGTTTTAACTGTAACTCTGGAAATACATGTTTTGACACACCCTaGAATACAAGTAAGAATCCAGAAGGCCTTAGCAAACCAACAATA | + |
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Preference number: 1 (lower is better) Translates to: ASFNCNSGNTCFDTP*NTSKNPEGLSKPTI Trigger: TATTGTTGGTTTGCTAAGGCCTTCTGGATTCTTACTTGTATTTCAGGGTGTGTCAAAACATGTATTTCCAGAGTTACAGTTAAAACTGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR TCA 90 bp | CTGCAGCATGGTGTTTGTGCTACAGCCTGTTTTGAAGATGAGAGATaGATTCAAACAACTTTTCCTTACAATAGAAATAAGCACTGTTGT | + |
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Preference number: 1 (lower is better) Translates to: LQHGVCATACFEDER*IQTTFPYNRNKHCC Trigger: ACAACAGTGCTTATTTCTATTGTAAGGAAAAGTTGTTTGAATTCATCTCTCATCTTCAAAACAGGCTGTAGCACAAACACCATGCTGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR-3UTR TCA 90 bp | CCGCTCCCCGTTGCCTCTATGAGGGTGCTCCCCCACCCACTCCCACTCCACTGCAGACACGGGGATAATTaGAGTTCTGGAGCCTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: PLPVASMRVLPHPLPLHCRHGDN*SSGASA Trigger: TGCAGAGGCTCCAGAACTTCAATTATCCCCGTGTCT...GCAGTGGAGTGGGAGTGGGTGGGGGAGCACCCTCATAGAGGCAACGGGGAGCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR-3UTR GCA 90 bp | CCGCTCCCCGTTGCCTCTATGAGGGTGCTCCCCCACCCACTCCCACTCCACTGCGTTCCTTCTTACAACTaGTTTGTTATCCCATCTCCT | + |
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Preference number: 2 (lower is better) Translates to: PLPVASMRVLPHPLPLHCVPSYN*FVIPSP Trigger: AGGAGATGGGATAACAAAGCAGTTGTAAGAAGGAAC...GCAGTGGAGTGGGAGTGGGTGGGGGAGCACCCTCATAGAGGCAACGGGGAGCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR-3UTR TCA 90 bp | CCGCTCCCCGTTGCCTCTATGAGGGTGCTCCCCCACCCACTCCCACTCCACTGCTGGAAATACATGTTTTaGCACACCCTGAAATACAAG | + |
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Preference number: 2 (lower is better) Translates to: PLPVASMRVLPHPLPLHCWKYMF*HTLKYK Trigger: CTTGTATTTCAGGGTGTGTCAAAACATGTATTTCCA...GCAGTGGAGTGGGAGTGGGTGGGGGAGCACCCTCATAGAGGCAACGGGGAGCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR CAA 90 bp | TTCTGGAGCCTCTGCAGGTGGCCAAGGCTGGTTTGTTTAATCTGGTaGCTGGAAGGAAAATCAAGGCCTCAAATGTGTCTGATTTGGATG | + |
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Preference number: 2 (lower is better) Translates to: FWSLCRWPRLVCLIW*LEGKSRPQMCLIWM Trigger: CATCCAAATCAGACACATTTGAGGCCTTGATTTTCCTTCCAGCAACCAGATTAAACAAACCAGCCTTGGCCACCTGCAGAGGCTCCAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR CAA 90 bp | GGGATAATTGAAGTTCTGGAGCCTCTGCAGGTGGCCAAGGCTGGTTaGTTTAATCTGGTTGCTGGAAGGAAAATCAAGGCCTCAAATGTG | + |
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Preference number: 2 (lower is better) Translates to: GIIEVLEPLQVAKAG*FNLVAGRKIKASNV Trigger: CACATTTGAGGCCTTGATTTTCCTTCCAGCAACCAGATTAAACAAACCAGCCTTGGCCACCTGCAGAGGCTCCAGAACTTCAATTATCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR-3UTR TCA 90 bp | ATGATATCCCTCTTCCTGGTTCCTCTTCCACAAATTCCCATCCCACATCTGCCCAAGGATGTCACAGAATaGCAGGAGCTAGTAAGACAG | + |
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Preference number: 2 (lower is better) Translates to: MISLFLVPLPQIPIPHLPKDVTE*QELVRQ Trigger: CTGTCTTACTAGCTCCTGTCATTCTGTGACATCCTT...GGGCAGATGTGGGATGGGAATTTGTGGAAGAGGAACCAGGAAGAGGGATATCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR-3UTR CCA 90 bp | ATGATATCCCTCTTCCTGGTTCCTCTTCCACAAATTCCCATCCCACATCTGCCCTATAATCCCACCATTTaGAAAGACAGAGGCAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: MISLFLVPLPQIPIPHLPYNPTI*KDRGRR Trigger: CCTTCTGCCTCTGTCTTTCCAAATGGTGGGATTATA...GGGCAGATGTGGGATGGGAATTTGTGGAAGAGGAACCAGGAAGAGGGATATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR-3UTR GCA 90 bp | GAAATACATGTTTTGACACACCCTGAAATACAAGTAAGAATCCAGAAGGCCTTAAAGTTCTGGAGCCTCTaGAGGTGGCCAAGGCTGGTT | + |
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Preference number: 2 (lower is better) Translates to: EIHVLTHPEIQVRIQKALKFWSL*RWPRLV Trigger: AACCAGCCTTGGCCACCTGCAGAGGCTCCAGAACTT...TAAGGCCTTCTGGATTCTTACTTGTATTTCAGGGTGTGTCAAAACATGTATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR-3UTR CCA 90 bp | ACAACTTTTCCTTACAATAGAAATAAGCACTGTTGTGAGTTCAATTTTGCCTCCTGGAGCCTCTGCAGGTaGCCAAGGCTGGTTTGTTTA | + |
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Preference number: 2 (lower is better) Translates to: TTFPYNRNKHCCEFNFASWSLCR*PRLVCL Trigger: TAAACAAACCAGCCTTGGCCACCTGCAGAGGCTCCA...GGAGGCAAAATTGAACTCACAACAGTGCTTATTTCTATTGTAAGGAAAAGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR CAA 90 bp | TTACAACTGCTTTGTTATCCCATCTCCTTCAGTGTAGTATCTCACTaGGTACTGAGGGATATACGGAGTACTGACCAATGTAAAGGATGT | + |
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Preference number: 2 (lower is better) Translates to: LQLLCYPISFSVVSH*VLRDIRSTDQCKGC Trigger: ACATCCTTTACATTGGTCAGTACTCCGTATATCCCTCAGTACCAAGTGAGATACTACACTGAAGGAGATGGGATAACAAAGCAGTTGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR CAA 90 bp | GTTACCAGAAGGCCAGTTTTAACTGTAACTCTGGAAATACATGTTTaGACACACCCTGAAATACAAGTAAGAATCCAGAAGGCCTTAGCA | + |
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Preference number: 2 (lower is better) Translates to: VTRRPVLTVTLEIHV*THPEIQVRIQKALA Trigger: TGCTAAGGCCTTCTGGATTCTTACTTGTATTTCAGGGTGTGTCAAAACATGTATTTCCAGAGTTACAGTTAAAACTGGCCTTCTGGTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR-3UTR GCA 90 bp | TTTGATAAACTTGCTGTCTGCAGCATGGTGTTTGTGCTACAGCCTGTTTTGAAGCAGCATGTTTCTGCATaGAGATGTATTTCAAATAGG | + |
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Preference number: 2 (lower is better) Translates to: FDKLAVCSMVFVLQPVLKQHVSA*RCISNR Trigger: CCTATTTGAAATACATCTGCATGCAGAAACATGCTG...CTTCAAAACAGGCTGTAGCACAAACACCATGCTGCAGACAGCAAGTTTATCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR-3UTR CCA 90 bp | ATCATTCCATTCGTTTACTTCTCAAATGATATCCCTCTTCCTGGTTCCTCTTCCCAAATGTGTCTGATTTaGATGTTGGGGATAAACCCA | + |
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Preference number: 2 (lower is better) Translates to: IIPFVYFSNDIPLPGSSSQMCLI*MLGINP Trigger: TGGGTTTATCCCCAACATCCAAATCAGACACATTTG...GGAAGAGGAACCAGGAAGAGGGATATCATTTGAGAAGTAAACGAATGGAATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR CAA 90 bp | TTTATAATCCCACCATTTGGAAAGACAGAGGCAGAAGGATCTAAGTaGAGACCAACATGGGTGAAATACAGAAAGACTTGGAAGCAAATT | + |
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Preference number: 2 (lower is better) Translates to: FIIPPFGKTEAEGSK*RPTWVKYRKTWKQI Trigger: AATTTGCTTCCAAGTCTTTCTGTATTTCACCCATGTTGGTCTCAACTTAGATCCTTCTGCCTCTGTCTTTCCAAATGGTGGGATTATAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR-3UTR CCA 90 bp | TCAATTTTGCCTCCGCTCCAAATGTTTATAATCCCACCATTTGGAAAGACAGAGCTGGTTTGTTTAATCTaGTTGCTGGAAGGAAAATCA | + |
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Preference number: 2 (lower is better) Translates to: SILPPLQMFIIPPFGKTELVCLI*LLEGKS Trigger: TGATTTTCCTTCCAGCAACCAGATTAAACAAACCAG...CTCTGTCTTTCCAAATGGTGGGATTATAAACATTTGGAGCGGAGGCAAAATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR-3UTR CCA 90 bp | ATTCCATTCGTTTACTTCTCAAATGATATCCCTCTTCCTGGTTCCTCTTCCACAAAGTTGAGACCAACATaGGTGAAATACAGAAAGACT | + |
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Preference number: 2 (lower is better) Translates to: IPFVYFSNDIPLPGSSSTKLRPT*VKYRKT Trigger: AGTCTTTCTGTATTTCACCCATGTTGGTCTCAACTT...TGTGGAAGAGGAACCAGGAAGAGGGATATCATTTGAGAAGTAAACGAATGGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR CAA 90 bp | GATAAACTTGCTGTCTGCAGCATGGTGTTTGTGCTACAGCCTGTTTaGAAGATGAGAGATGAATTCAAACAACTTTTCCTTACAATAGAA | + |
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Preference number: 2 (lower is better) Translates to: DKLAVCSMVFVLQPV*KMRDEFKQLFLTIE Trigger: TTCTATTGTAAGGAAAAGTTGTTTGAATTCATCTCTCATCTTCAAAACAGGCTGTAGCACAAACACCATGCTGCAGACAGCAAGTTTATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR CAA 90 bp | CAACTTTTCCTTACAATAGAAATAAGCACTGTTGTGAGTTCAATTTaGCCTCCGCTCCAAATGTTTATAATCCCACCATTTGGAAAGACA | + |
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Preference number: 2 (lower is better) Translates to: QLFLTIEISTVVSSI*PPLQMFIIPPFGKT Trigger: TGTCTTTCCAAATGGTGGGATTATAAACATTTGGAGCGGAGGCAAAATTGAACTCACAACAGTGCTTATTTCTATTGTAAGGAAAAGTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR TCA 72 bp | TGCAGATGTATTTCAAATAGGAGACACGGGGATAATTaGAGTTCTGGAGCCTCTGCAGGTGGCCAAGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: CRCISNRRHGDN*SSGASAGGQGW Trigger: CCAGCCTTGGCCACCTGCAGAGGCTCCAGAACTTCAATTATCCCCGTGTCTCCTATTTGAAATACATCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR CCA 72 bp | AGCCTCTGCAGGTGGCCAAGGCTGGTTTGTTTAATCTaGTTGCTGGAAGGAAAATCAAGGCCTCAAATGTGT | + |
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Preference number: 3 (lower is better) Translates to: SLCRWPRLVCLI*LLEGKSRPQMC Trigger: ACACATTTGAGGCCTTGATTTTCCTTCCAGCAACCAGATTAAACAAACCAGCCTTGGCCACCTGCAGAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR-3UTR CAA 90 bp | CTTGCTGTCTGCAGCATGGTGTTTGTGCTACAGCCTGTTTTGAAGATGAGAGATGCAGAAGGATCTAAGTaGAGACCAACATGGGTGAAA | + |
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Preference number: 3 (lower is better) Translates to: LAVCSMVFVLQPVLKMRDAEGSK*RPTWVK Trigger: TTTCACCCATGTTGGTCTCAACTTAGATCCTTCTGC...ATCTCTCATCTTCAAAACAGGCTGTAGCACAAACACCATGCTGCAGACAGCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR GCA 72 bp | GCTCATGTTGTCCTTAGGCATCAGCATGTTTCTGCATaGAGATGTATTTCAAATAGGAGACACGGGGATAAT | + |
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Preference number: 3 (lower is better) Translates to: AHVVLRHQHVSA*RCISNRRHGDN Trigger: ATTATCCCCGTGTCTCCTATTTGAAATACATCTGCATGCAGAAACATGCTGATGCCTAAGGACAACATGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR CCA 72 bp | AAGACAGAGGCAGAAGGATCTAAGTTGAGACCAACATaGGTGAAATACAGAAAGACTTGGAAGCAAATTGCC | + |
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Preference number: 3 (lower is better) Translates to: KTEAEGSKLRPT*VKYRKTWKQIA Trigger: GGCAATTTGCTTCCAAGTCTTTCTGTATTTCACCCATGTTGGTCTCAACTTAGATCCTTCTGCCTCTGTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR-3UTR CAA 90 bp | ATACATGTTTTGACACACCCTGAAATACAAGTAAGAATCCAGAAGGCCTTAGCATGTCTGATTTGGATGTaGGGGATAAACCCAAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: IHVLTHPEIQVRIQKALACLIWM*GINPRP Trigger: AGGCCTTGGGTTTATCCCCAACATCCAAATCAGACA...TGCTAAGGCCTTCTGGATTCTTACTTGTATTTCAGGGTGTGTCAAAACATGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR GCA 72 bp | AACATGGGTGAAATACAGAAAGACTTGGAAGCAAATTaGCTGTGTCTCACAAATGTTACCAGAAGGCCAGTT | + |
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Preference number: 3 (lower is better) Translates to: NMGEIQKDLEAN*LCLTNVTRRPV Trigger: AACTGGCCTTCTGGTAACATTTGTGAGACACAGGCAATTTGCTTCCAAGTCTTTCTGTATTTCACCCATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR-3UTR CAA 90 bp | TCAATTTTGCCTCCGCTCCAAATGTTTATAATCCCACCATTTGGAAAGACAGAGCTTCTTACAACTGCTTaGTTATCCCATCTCCTTCAG | + |
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Preference number: 3 (lower is better) Translates to: SILPPLQMFIIPPFGKTELLTTA*LSHLLQ Trigger: CTGAAGGAGATGGGATAACAAAGCAGTTGTAAGAAG...CTCTGTCTTTCCAAATGGTGGGATTATAAACATTTGGAGCGGAGGCAAAATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR-3UTR CAA 90 bp | ATCATTCCATTCGTTTACTTCTCAAATGATATCCCTCTTCCTGGTTCCTCTTCCGTTTGTTTAATCTGGTaGCTGGAAGGAAAATCAAGG | + |
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Preference number: 3 (lower is better) Translates to: IIPFVYFSNDIPLPGSSSVCLIW*LEGKSR Trigger: CCTTGATTTTCCTTCCAGCAACCAGATTAAACAAAC...GGAAGAGGAACCAGGAAGAGGGATATCATTTGAGAAGTAAACGAATGGAATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| 3UTR TCA 72 bp | AACTGTAACTCTGGAAATACATGTTTTGACACACCCTaGAATACAAGTAAGAATCCAGAAGGCCTTAGCAAA | + |
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Preference number: 3 (lower is better) Translates to: NCNSGNTCFDTP*NTSKNPEGLSK Trigger: TTTGCTAAGGCCTTCTGGATTCTTACTTGTATTTCAGGGTGTGTCAAAACATGTATTTCCAGAGTTACAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS-3UTR TCA 90 bp | CCGCTCCCCGTTGCCTCTATGAGGGTGCTCCCCCACCCACTCCCACTCCACTGCAGTCTCCCTGCTGAGTaGGTCGGAAGAGGGGGATCC | + |
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Preference number: 4 (lower is better) Translates to: PLPVASMRVLPHPLPLHCSLPAE*VGRGGS Trigger: GGATCCCCCTCTTCCGACTCACTCAGCAGGGAGACT...GCAGTGGAGTGGGAGTGGGTGGGGGAGCACCCTCATAGAGGCAACGGGGAGCGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS-3UTR GCA 90 bp | CTCTTCCTGGTTCCTCTTCCACAAATTCCCATCCCACATCTGCCCTCTCCCCCGGCAGCAGGTTGTGGCTaGCATCGAGGCTGCGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: LFLVPLPQIPIPHLPSPPAAGCG*HRGCAA Trigger: CGCTGCGCAGCCTCGATGGCAGCCACAACCTGCTGC...CGGGGGAGAGGGCAGATGTGGGATGGGAATTTGTGGAAGAGGAACCAGGAAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS-3UTR TCA 90 bp | CTCTTCCTGGTTCCTCTTCCACAAATTCCCATCCCACATCTGCCCTCTCCCCCGTGGTATCCTCCCCACTaGGACCAGGGCAACGGCATC | + |
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Preference number: 4 (lower is better) Translates to: LFLVPLPQIPIPHLPSPPWYPPH*DQGNGI Trigger: GATGCCGTTGCCCTGGTCTCAGTGGGGAGGATACCA...CGGGGGAGAGGGCAGATGTGGGATGGGAATTTGTGGAAGAGGAACCAGGAAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS-3UTR GCA 90 bp | ATGATATCCCTCTTCCTGGTTCCTCTTCCACAAATTCCCATCCCACATCTGCCCGCGCCTCTGCAGCTCTaGGCACGGGGTCTGCAGATG | + |
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Preference number: 4 (lower is better) Translates to: MISLFLVPLPQIPIPHLPAPLQL*ARGLQM Trigger: CATCTGCAGACCCCGTGCGCAGAGCTGCAGAGGCGC...GGGCAGATGTGGGATGGGAATTTGTGGAAGAGGAACCAGGAAGAGGGATATCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS-3UTR TCA 90 bp | CTTGCTGTCTGCAGCATGGTGTTTGTGCTACAGCCTGTTTTGAAGATGAGAGATGAGGGAGAGAGGGCCTaGGAAGGGGCCCGTGGATCC | + |
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Preference number: 4 (lower is better) Translates to: LAVCSMVFVLQPVLKMRDEGERA*EGARGS Trigger: GGATCCACGGGCCCCTTCTCAGGCCCTCTCTCCCTC...ATCTCTCATCTTCAAAACAGGCTGTAGCACAAACACCATGCTGCAGACAGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS-3UTR TCA 90 bp | ATCAAGGCCTCAAATGTGTCTGATTTGGATGTTGGGGATAAACCCAAGGCCTTGCGCTGCAGGAGAGGTTaGGAAGCCGCAGCGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: IKASNVSDLDVGDKPKALRCRRG*EAAALG Trigger: TCCCAGCGCTGCGGCTTCTCAACCTCTCCTGCAGCG...CAAGGCCTTGGGTTTATCCCCAACATCCAAATCAGACACATTTGAGGCCTTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS-3UTR CCA 90 bp | CTCTTCCTGGTTCCTCTTCCACAAATTCCCATCCCACATCTGCCCTCTCCCCCGCACCAGGCAGAGCCCTaGAAGGACTATAAACTAGCT | + |
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Preference number: 4 (lower is better) Translates to: LFLVPLPQIPIPHLPSPPHQAEP*KDYKLA Trigger: AGCTAGTTTATAGTCCTTCCAGGGCTCTGCCTGGTG...CGGGGGAGAGGGCAGATGTGGGATGGGAATTTGTGGAAGAGGAACCAGGAAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS-3UTR CCA 90 bp | CTTGCTGTCTGCAGCATGGTGTTTGTGCTACAGCCTGTTTTGAAGATGAGAGATGCTCTGCCCCAGAACTaGCAGCACCAGGCAGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: LAVCSMVFVLQPVLKMRDALPQN*QHQAEP Trigger: GGGCTCTGCCTGGTGCTGCCAGTTCTGGGGCAGAGC...ATCTCTCATCTTCAAAACAGGCTGTAGCACAAACACCATGCTGCAGACAGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS-3UTR GCA 90 bp | TCAAGGCCTCAAATGTGTCTGATTTGGATGTTGGGGATAAACCCAAGGCCTTGTCATCTGAAGCGCCTCTaGAGCTCTGCGCACGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: SRPQMCLIWMLGINPRPCHLKRL*SSAHGV Trigger: GACCCCGTGCGCAGAGCTGCAGAGGCGCTTCAGATG...ACAAGGCCTTGGGTTTATCCCCAACATCCAAATCAGACACATTTGAGGCCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS-3UTR CCA 90 bp | ATCAAGGCCTCAAATGTGTCTGATTTGGATGTTGGGGATAAACCCAAGGCCTTGTGTGGAGGGTCTGTGTaGAGAGCCCTGGGCGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: IKASNVSDLDVGDKPKALCGGSV*RALGVA Trigger: AGCCACGCCCAGGGCTCTCCACACAGACCCTCCACA...CAAGGCCTTGGGTTTATCCCCAACATCCAAATCAGACACATTTGAGGCCTTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS-3UTR CCA 90 bp | ATCATTCCATTCGTTTACTTCTCAAATGATATCCCTCTTCCTGGTTCCTCTTCCGCGCGCAGCAGGTTGTaGCTGCCATCGAGGCTGCGC | + |
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Preference number: 4 (lower is better) Translates to: IIPFVYFSNDIPLPGSSSARSRL*LPSRLR Trigger: GCGCAGCCTCGATGGCAGCCACAACCTGCTGCGCGC...GGAAGAGGAACCAGGAAGAGGGATATCATTTGAGAAGTAAACGAATGGAATGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS-3UTR CCA 90 bp | ATGATATCCCTCTTCCTGGTTCCTCTTCCACAAATTCCCATCCCACATCTGCCCGCTCAAGGATATGTGTaGCAGTCTGCTCTGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: MISLFLVPLPQIPIPHLPAQGYV*QSALPQ Trigger: CTGGGGCAGAGCAGACTGCCACACATATCCTTGAGC...GGGCAGATGTGGGATGGGAATTTGTGGAAGAGGAACCAGGAAGAGGGATATCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS-3UTR CCA 90 bp | ATCATTCCATTCGTTTACTTCTCAAATGATATCCCTCTTCCTGGTTCCTCTTCCGGAGGTGCCGCCACCTaGTCCCGAGTCTCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: IIPFVYFSNDIPLPGSSSGGAAT*SRVSSS Trigger: GGAGGAGGAGACTCGGGACCAGGTGGCGGCACCTCC...GGAAGAGGAACCAGGAAGAGGGATATCATTTGAGAAGTAAACGAATGGAATGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS-3UTR CCA 90 bp | ATGATATCCCTCTTCCTGGTTCCTCTTCCACAAATTCCCATCCCACATCTGCCCTTGGGGGCACACCAGTaGACGAGCACTGATGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: MISLFLVPLPQIPIPHLPLGAHQ*TSTDVS Trigger: TGACACATCAGTGCTCGTCCACTGGTGTGCCCCCAA...GGGCAGATGTGGGATGGGAATTTGTGGAAGAGGAACCAGGAAGAGGGATATCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS-3UTR CCA 90 bp | CTTGCTGTCTGCAGCATGGTGTTTGTGCTACAGCCTGTTTTGAAGATGAGAGATCCTGAGGTCTGTGACTaGCTCAGGCCAGCCCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LAVCSMVFVLQPVLKMRDPEVCD*LRPALL Trigger: CAACAGGGCTGGCCTGAGCCAGTCACAGACCTCAGG...ATCTCTCATCTTCAAAACAGGCTGTAGCACAAACACCATGCTGCAGACAGCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR TCA 90 bp | TGTGTGAGCCTGAGACATGGTGGCTTCAGGGAATTTGAAGCTCATGTTGTCCTTCTCTGGCTGGGTTTTTaGAGGCCACCAGGTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CVSLRHGGFREFEAHVVLLWLGF*RPPGVC Trigger: ACACACACCTGGTGGCCTTCAAAAACCCAGCCAGAG...AAGGACAACATGAGCTTCAAATTCCCTGAAGCCACCATGTCTCAGGCTCACACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| 3UTR CAA 72 bp | GAAGTTCTGGAGCCTCTGCAGGTGGCCAAGGCTGGTTaGTTTAATCTGGTTGCTGGAAGGAAAATCAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EVLEPLQVAKAG*FNLVAGRKIKA Trigger: GGCCTTGATTTTCCTTCCAGCAACCAGATTAAACAAACCAGCCTTGGCCACCTGCAGAGGCTCCAGAACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR TCA 90 bp | ATCAAGGCCTCAAATGTGTCTGATTTGGATGTTGGGGATAAACCCAAGGCCTTGGCTCCTGGGGTTTGGTaGAGTAGGCAAGGGTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: IKASNVSDLDVGDKPKALAPGVW*SRQGFK Trigger: CTTGAACCCTTGCCTACTTCACCAAACCCCAGGAGC...CAAGGCCTTGGGTTTATCCCCAACATCCAAATCAGACACATTTGAGGCCTTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR TCA 90 bp | ATTCCATTCGTTTACTTCTCAAATGATATCCCTCTTCCTGGTTCCTCTTCCACATGTGTCAGTCACCTCTaGCACCCCCTGCAGCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IPFVYFSNDIPLPGSSSTCVSHL*HPLQRG Trigger: CCCACGCTGCAGGGGGTGTCAGAGGTGACTGACACA...TGTGGAAGAGGAACCAGGAAGAGGGATATCATTTGAGAAGTAAACGAATGGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR GCA 90 bp | ATCATTCCATTCGTTTACTTCTCAAATGATATCCCTCTTCCTGGTTCCTCTTCCAGGAGCTGCAGCAGCTaGAGCATCAGCGTCCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: IIPFVYFSNDIPLPGSSSRSCSS*SISVHR Trigger: GCGGTGGACGCTGATGCTGCAGCTGCTGCAGCTCCT...GGAAGAGGAACCAGGAAGAGGGATATCATTTGAGAAGTAAACGAATGGAATGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR GCA 90 bp | TTTGATAAACTTGCTGTCTGCAGCATGGTGTTTGTGCTACAGCCTGTTTTGAAGCAGCGCTGGGAAGCATaGAAAGGTCCGTGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FDKLAVCSMVFVLQPVLKQRWEA*KGPWQQ Trigger: CTGCTGCCACGGACCTTTGCATGCTTCCCAGCGCTG...CTTCAAAACAGGCTGTAGCACAAACACCATGCTGCAGACAGCAAGTTTATCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR CCA 90 bp | TCAAGGCCTCAAATGTGTCTGATTTGGATGTTGGGGATAAACCCAAGGCCTTGTATCCTTTCCAGGCTCTaGCTCTGCGCCATCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SRPQMCLIWMLGINPRPCILSRL*LCAISS Trigger: ACTGCTGATGGCGCAGAGCCAGAGCCTGGAAAGGAT...ACAAGGCCTTGGGTTTATCCCCAACATCCAAATCAGACACATTTGAGGCCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR CCA 90 bp | TGTGTGAGCCTGAGACATGGTGGCTTCAGGGAATTTGAAGCTCATGTTGTCCTTCTGACGGACAAGACCTaGGAGGAATTCCAAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: CVSLRHGGFREFEAHVVLLTDKT*EEFQGP Trigger: TGGTCCTTGGAATTCCTCCCAGGTCTTGTCCGTCAG...AAGGACAACATGAGCTTCAAATTCCCTGAAGCCACCATGTCTCAGGCTCACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR CCA 90 bp | TTTGATAAACTTGCTGTCTGCAGCATGGTGTTTGTGCTACAGCCTGTTTTGAAGACACCCCCTGCAGCGTaGGAGGGTCTGGAGTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: FDKLAVCSMVFVLQPVLKTPPAA*EGLEWY Trigger: ATACCACTCCAGACCCTCCCACGCTGCAGGGGGTGT...CTTCAAAACAGGCTGTAGCACAAACACCATGCTGCAGACAGCAAGTTTATCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR GCA 90 bp | TCAATTTTGCCTCCGCTCCAAATGTTTATAATCCCACCATTTGGAAAGACAGAGGCAGGCTCTCCAGGCTaGGGTTCGCCAAGTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SILPPLQMFIIPPFGKTEAGSPG*GSPSSE Trigger: CTCTGAACTTGGCGAACCGCAGCCTGGAGAGCCTGC...CTCTGTCTTTCCAAATGGTGGGATTATAAACATTTGGAGCGGAGGCAAAATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR CCA 90 bp | CTTGCTGTCTGCAGCATGGTGTTTGTGCTACAGCCTGTTTTGAAGATGAGAGATTGGAATCTCATCCTGTaGAGGGTCTGTGTGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LAVCSMVFVLQPVLKMRDWNLIL*RVCVES Trigger: GCTCTCCACACAGACCCTCCACAGGATGAGATTCCA...ATCTCTCATCTTCAAAACAGGCTGTAGCACAAACACCATGCTGCAGACAGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR TCA 90 bp | GAAATACATGTTTTGACACACCCTGAAATACAAGTAAGAATCCAGAAGGCCTTAGAAGCGGCCTGGGTTTaGAGGCAGGAGGGTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EIHVLTHPEIQVRIQKALEAAWV*RQEGGA Trigger: AGCACCACCCTCCTGCCTTCAAACCCAGGCCGCTTC...TAAGGCCTTCTGGATTCTTACTTGTATTTCAGGGTGTGTCAAAACATGTATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR GCA 90 bp | TTTGATAAACTTGCTGTCTGCAGCATGGTGTTTGTGCTACAGCCTGTTTTGAAGAGTTGTAGCAGGAGCTaGAGCAGCTGCAGCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FDKLAVCSMVFVLQPVLKSCSRS*SSCSIS Trigger: GCTGATGCTGCAGCTGCTGCAGCTCCTGCTACAACT...CTTCAAAACAGGCTGTAGCACAAACACCATGCTGCAGACAGCAAGTTTATCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR GCA 90 bp | GAAATACATGTTTTGACACACCCTGAAATACAAGTAAGAATCCAGAAGGCCTTATCTGCGCACGGGGTCTaGAGATGCTTGCAGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EIHVLTHPEIQVRIQKALSAHGV*RCLQGW Trigger: CCACCCCTGCAAGCATCTGCAGACCCCGTGCGCAGA...TAAGGCCTTCTGGATTCTTACTTGTATTTCAGGGTGTGTCAAAACATGTATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR GCA 90 bp | TCAATTTTGCCTCCGCTCCAAATGTTTATAATCCCACCATTTGGAAAGACAGAGGAGCAGACAAGGCCGTaGTCTGTTCAATGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SILPPLQMFIIPPFGKTEEQTRP*SVQWKA Trigger: GGCCTTCCATTGAACAGAGCACGGCCTTGTCTGCTC...CTCTGTCTTTCCAAATGGTGGGATTATAAACATTTGGAGCGGAGGCAAAATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR GCA 90 bp | ATCATTCCATTCGTTTACTTCTCAAATGATATCCCTCTTCCTGGTTCCTCTTCCCACGGGGTCTGCAGATaGTTGCAGGGGTGGTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: IIPFVYFSNDIPLPGSSSHGVCR*LQGWYS Trigger: TGAATACCACCCCTGCAAGCATCTGCAGACCCCGTG...GGAAGAGGAACCAGGAAGAGGGATATCATTTGAGAAGTAAACGAATGGAATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR CCA 90 bp | TTTCCTTACAATAGAAATAAGCACTGTTGTGAGTTCAATTTTGCCTCCGCTCCAAGAGCACCACTGAGTTaGGGGCACACCAGTGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: FPYNRNKHCCEFNFASAPRAPLS*GHTSGR Trigger: TCGTCCACTGGTGTGCCCCCAACTCAGTGGTGCTCT...TGGAGCGGAGGCAAAATTGAACTCACAACAGTGCTTATTTCTATTGTAAGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR CCA 90 bp | AGGAAAATCAAGGCCTCAAATGTGTCTGATTTGGATGTTGGGGATAAACCCAAGTTCCTCAGCTCTGGCTaGGTTTTTGAAGGCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: RKIKASNVSDLDVGDKPKFLSSG*VFEGHQ Trigger: CTGGTGGCCTTCAAAAACCCAGCCAGAGCTGAGGAA...CTTGGGTTTATCCCCAACATCCAAATCAGACACATTTGAGGCCTTGATTTTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| 3UTR CAA 72 bp | GCTGGAAGGAAAATCAAGGCCTCAAATGTGTCTGATTaGGATGTTGGGGATAAACCCAAGGCCTTGTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGRKIKASNVSD*DVGDKPKALYR Trigger: CCTGTACAAGGCCTTGGGTTTATCCCCAACATCCAAATCAGACACATTTGAGGCCTTGATTTTCCTTCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| 3UTR CAA 72 bp | CCAGAAGGCCTTAGCAAACCAACAATAGCTCTTACCTaGGCTATCAGCTCAAGGCCAACAGAACTCATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PEGLSKPTIALT*AISSRPTELIV Trigger: CACAATGAGTTCTGTTGGCCTTGAGCTGATAGCCAAGGTAAGAGCTATTGTTGGTTTGCTAAGGCCTTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR TCA 90 bp | TCAATTTTGCCTCCGCTCCAAATGTTTATAATCCCACCATTTGGAAAGACAGAGGCTTTGGCAGGTTTCTaGTCCACCCAGACTCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: SILPPLQMFIIPPFGKTEALAGF*STQTQL Trigger: GAGTTGAGTCTGGGTGGATCAGAAACCTGCCAAAGC...CTCTGTCTTTCCAAATGGTGGGATTATAAACATTTGGAGCGGAGGCAAAATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR TCA 90 bp | TCAATTTTGCCTCCGCTCCAAATGTTTATAATCCCACCATTTGGAAAGACAGAGGCTCACAGCTGCAAATaGGAGGGTTGCCAAAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SILPPLQMFIIPPFGKTEAHSCK*EGCQRD Trigger: GTCTCTTTGGCAACCCTCTCATTTGCAGCTGTGAGC...CTCTGTCTTTCCAAATGGTGGGATTATAAACATTTGGAGCGGAGGCAAAATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR TCA 90 bp | TCAAGGCCTCAAATGTGTCTGATTTGGATGTTGGGGATAAACCCAAGGCCTTGTTGGGGTAGAGGCAGATaGAATATTAGGCTCAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SRPQMCLIWMLGINPRPCWGRGR*NIRLKD Trigger: ATCCTTGAGCCTAATATTTCATCTGCCTCTACCCCA...ACAAGGCCTTGGGTTTATCCCCAACATCCAAATCAGACACATTTGAGGCCTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR GCA 90 bp | ATACATGTTTTGACACACCCTGAAATACAAGTAAGAATCCAGAAGGCCTTAGCAAAGGCAGGAGGGTGGTaGTTTGGTCTGACCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: IHVLTHPEIQVRIQKALAKAGGW*FGLTCT Trigger: TGTGCAGGTCAGACCAAAGCACCACCCTCCTGCCTT...TGCTAAGGCCTTCTGGATTCTTACTTGTATTTCAGGGTGTGTCAAAACATGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR GCA 90 bp | ACAACTTTTCCTTACAATAGAAATAAGCACTGTTGTGAGTTCAATTTTGCCTCCTGTGGCAGTCTGCTCTaGCCCAGAACTGGCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TTFPYNRNKHCCEFNFASCGSLL*PRTGST Trigger: GGTGCTGCCAGTTCTGGGGCAGAGCAGACTGCCACA...GGAGGCAAAATTGAACTCACAACAGTGCTTATTTCTATTGTAAGGAAAAGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR CCA 90 bp | ATCATTCCATTCGTTTACTTCTCAAATGATATCCCTCTTCCTGGTTCCTCTTCCCACACACATGGTAGGTaGTGCCAGGTGTCAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IIPFVYFSNDIPLPGSSSHTHGR*CQVSAC Trigger: ACAAGCTGACACCTGGCACCACCTACCATGTGTGTG...GGAAGAGGAACCAGGAAGAGGGATATCATTTGAGAAGTAAACGAATGGAATGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR TCA 90 bp | ACAACTTTTCCTTACAATAGAAATAAGCACTGTTGTGAGTTCAATTTTGCCTCCACAGTCCCCAGAAGATaGCCACAGAGCTGGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TTFPYNRNKHCCEFNFASTVPRR*PQSWAW Trigger: CCAAGCCCAGCTCTGTGGTCATCTTCTGGGGACTGT...GGAGGCAAAATTGAACTCACAACAGTGCTTATTTCTATTGTAAGGAAAAGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS-3UTR CCA 90 bp | ATTCCATTCGTTTACTTCTCAAATGATATCCCTCTTCCTGGTTCCTCTTCCACAAGATGCTTGCAGGGGTaGTATTCACAAGAGACGTCC | + |
|
Preference number: 4 (lower is better) Translates to: IPFVYFSNDIPLPGSSSTRCLQG*YSQETS Trigger: GGACGTCTCTTGTGAATACCACCCCTGCAAGCATCT...TGTGGAAGAGGAACCAGGAAGAGGGATATCATTTGAGAAGTAAACGAATGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR CCA 90 bp | TTTGATAAACTTGCTGTCTGCAGCATGGTGTTTGTGCTACAGCCTGTTTTGAAGAACAGAAGTAAGTGCTaGAGAGTCTCCACAATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FDKLAVCSMVFVLQPVLKNRSKC*RVSTIQ Trigger: CTGGATTGTGGAGACTCTCCAGCACTTACTTCTGTT...CTTCAAAACAGGCTGTAGCACAAACACCATGCTGCAGACAGCAAGTTTATCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR TCA 90 bp | GAAATACATGTTTTGACACACCCTGAAATACAAGTAAGAATCCAGAAGGCCTTAGGTTGGGAGTCATCTTaGAAATGTCTCCCTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EIHVLTHPEIQVRIQKALGWESS*KCLPPV Trigger: CACTGGAGGGAGACATTTTCAAGATGACTCCCAACC...TAAGGCCTTCTGGATTCTTACTTGTATTTCAGGGTGTGTCAAAACATGTATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR CCA 90 bp | ACAACTTTTCCTTACAATAGAAATAAGCACTGTTGTGAGTTCAATTTTGCCTCCGAGGGACTTGAGCTTTaGCAGGTTTCTGATCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: TTFPYNRNKHCCEFNFASEGLEL*QVSDPP Trigger: GGGTGGATCAGAAACCTGCCAAAGCTCAAGTCCCTC...GGAGGCAAAATTGAACTCACAACAGTGCTTATTTCTATTGTAAGGAAAAGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| 3UTR CAA 72 bp | GCTGTCTGCAGCATGGTGTTTGTGCTACAGCCTGTTTaGAAGATGAGAGATGAATTCAAACAACTTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AVCSMVFVLQPV*KMRDEFKQLFL Trigger: AAGGAAAAGTTGTTTGAATTCATCTCTCATCTTCAAAACAGGCTGTAGCACAAACACCATGCTGCAGACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR TCA 90 bp | TCAATTTTGCCTCCGCTCCAAATGTTTATAATCCCACCATTTGGAAAGACAGAGATCTTTATACATCCATaGTCCTTGTGTGGGGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SILPPLQMFIIPPFGKTEIFIHP*SLCGGS Trigger: ACTTCCCCCACACAAGGATCATGGATGTATAAAGAT...CTCTGTCTTTCCAAATGGTGGGATTATAAACATTTGGAGCGGAGGCAAAATTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR CCA 90 bp | ACAACTTTTCCTTACAATAGAAATAAGCACTGTTGTGAGTTCAATTTTGCCTCCCCAGTGTCTTCAGCCTaGGCATCTTTCTCAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TTFPYNRNKHCCEFNFASPVSSA*ASFSGR Trigger: TCTTCCTGAGAAAGATGCCCAGGCTGAAGACACTGG...GGAGGCAAAATTGAACTCACAACAGTGCTTATTTCTATTGTAAGGAAAAGTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR CCA 90 bp | ATCATTCCATTCGTTTACTTCTCAAATGATATCCCTCTTCCTGGTTCCTCTTCCGAAGGACTTGTAGATTaGGTGTGTCTTGAAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: IIPFVYFSNDIPLPGSSSEGLVD*VCLERS Trigger: AGATCTTTCAAGACACACCCAATCTACAAGTCCTTC...GGAAGAGGAACCAGGAAGAGGGATATCATTTGAGAAGTAAACGAATGGAATGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR CCA 90 bp | ACAACTTTTCCTTACAATAGAAATAAGCACTGTTGTGAGTTCAATTTTGCCTCCTCAGAGTTAGTGGACTaGGCAGTTTCCTCTGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TTFPYNRNKHCCEFNFASSELVD*AVSSEA Trigger: TGCTTCAGAGGAAACTGCCCAGTCCACTAACTCTGA...GGAGGCAAAATTGAACTCACAACAGTGCTTATTTCTATTGTAAGGAAAAGTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR TCA 90 bp | ACTGCCTTTGTAAGTTTTAAAGTGGGATTTAGAGAGATCTTTCAAATTCTCCTGGTAAGACAGTTTTGTTaGCATCCACGAGAAGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TAFVSFKVGFREIFQILLVRQFC*HPREAK Trigger: CTTGGCTTCTCGTGGATGTCAACAAAACTGTCTTAC...CAGGAGAATTTGAAAGATCTCTCTAAATCCCACTTTAAAACTTACAAAGGCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| 3UTR CAA 72 bp | AGGCCAGTTTTAACTGTAACTCTGGAAATACATGTTTaGACACACCCTGAAATACAAGTAAGAATCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RPVLTVTLEIHV*THPEIQVRIQK Trigger: CTTCTGGATTCTTACTTGTATTTCAGGGTGTGTCAAAACATGTATTTCCAGAGTTACAGTTAAAACTGGCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR GCA 90 bp | ACAACTTTTCCTTACAATAGAAATAAGCACTGTTGTGAGTTCAATTTTGCCTCCCAAAGGAACTCAAGTTaGAGTTCTGAAACTGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TTFPYNRNKHCCEFNFASQRNSS*SSETEG Trigger: TCCTTCAGTTTCAGAACTGCAACTTGAGTTCCTTTG...GGAGGCAAAATTGAACTCACAACAGTGCTTATTTCTATTGTAAGGAAAAGTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| 3UTR CAA 72 bp | CTTACAATAGAAATAAGCACTGTTGTGAGTTCAATTTaGCCTCCGCTCCAAATGTTTATAATCCCACCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LTIEISTVVSSI*PPLQMFIIPPF Trigger: AAATGGTGGGATTATAAACATTTGGAGCGGAGGCAAAATTGAACTCACAACAGTGCTTATTTCTATTGTAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS CCA 90 bp | GGCAGGCGGCCGAGCACAGGCTCGCTAAGGGCGCGCAGCAGGTTGTaGCTGCCATCGAGGCTGCGCAGCGTGCGCGGCAGGCAGCTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GRRPSTGSLRARSRL*LPSRLRSVRGRQLG Trigger: GCCTAGCTGCCTGCCGCGCACGCTGCGCAGCCTCGATGGCAGCCACAACCTGCTGCGCGCCCTTAGCGAGCCTGTGCTCGGCCGCCTGCC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS TCA 90 bp | CCGAGGGCCCCGCGCAGGGCGGCAGCTCGGTCAGCAGGTTGTGACTaGGGTCGAGCTCACGCAGCTCGGCCAGCGTGTCACGGCCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PRAPRRAAARSAGCD*GRAHAARPACHGPS Trigger: ACTGGGGCCGTGACACGCTGGCCGAGCTGCGTGAGCTCGACCTCAGTCACAACCTGCTGACCGAGCTGCCGCCCTGCGCGGGGCCCTCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS CCA 90 bp | GCCAGGGGCCCACCGTCCACCCCCGCGAATGCCTCCTGGGCGATGTaGCCCAGCTCGCTGCAGGAGAGGTTGAGAAGCCGCAGCGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ARGPPSTPANASWAM*PSSLQERLRSRSAG Trigger: CCCAGCGCTGCGGCTTCTCAACCTCTCCTGCAGCGAGCTGGGCCACATCGCCCAGGAGGCATTCGCGGGGGTGGACGGTGGGCCCCTGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS CCA 90 bp | TCCAGTGCCGCCAGGGGCCCACCGTCCACCCCCGCGAATGCCTCCTaGGCGATGTGGCCCAGCTCGCTGCAGGAGAGGTTGAGAAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SSAARGPPSTPANAS*AMWPSSLQERLRSR Trigger: GCGGCTTCTCAACCTCTCCTGCAGCGAGCTGGGCCACATCGCCCAGGAGGCATTCGCGGGGGTGGACGGTGGGCCCCTGGCGGCACTGGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS GCA 90 bp | GCCAGCGTGTCACGGCCCCAGTGTAGCACGGAGATGCGGTTGTGGTaGAGCGTGAGTACGCGCAGCTCGGGCAGGCGGCCGAGCACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ASVSRPQCSTEMRLW*SVSTRSSGRRPSTG Trigger: GCCTGTGCTCGGCCGCCTGCCCGAGCTGCGCGTACTCACGCTGCACCACAACCGCATCTCCGTGCTACACTGGGGCCGTGACACGCTGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS GCA 90 bp | CAAGAGCTCCAGTGCCGCCAGGGGCCCACCGTCCACCCCCGCGAATaGCTCCTGGGCGATGTGGCCCAGCTCGCTGCAGGAGAGGTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QELQCRQGPTVHPRE*LLGDVAQLAAGEVE Trigger: CTCAACCTCTCCTGCAGCGAGCTGGGCCACATCGCCCAGGAGGCATTCGCGGGGGTGGACGGTGGGCCCCTGGCGGCACTGGAGCTCTTG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS CCA 90 bp | TCGGCCAGCGTGTCACGGCCCCAGTGTAGCACGGAGATGCGGTTGTaGTGCAGCGTGAGTACGCGCAGCTCGGGCAGGCGGCCGAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: SASVSRPQCSTEMRL*CSVSTRSSGRRPST Trigger: TGTGCTCGGCCGCCTGCCCGAGCTGCGCGTACTCACGCTGCACCACAACCGCATCTCCGTGCTACACTGGGGCCGTGACACGCTGGCCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS CCA 90 bp | GGAGAGGTTGAGAAGCCGCAGCGCTGGGAAGCATGCAAAGGTCCGTaGCAGCAGCGCTCGCAGTGGGTTCCCGGCCAGCGCCAGCGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: GEVEKPQRWEACKGP*QQRSQWVPGQRQRA Trigger: CGCTCGCTGGCGCTGGCCGGGAACCCACTGCGAGCGCTGCTGCCACGGACCTTTGCATGCTTCCCAGCGCTGCGGCTTCTCAACCTCTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR CAA 90 bp | CCGCTCCCCGTTGCCTCTATGAGGGTGCTCCCCCACCCACTCCCACTCCACTGCCTCAGGCCAGCCCTGTaGGCTGCCAGTACACACACA | + |
|
Preference number: 5 (lower is better) Translates to: PLPVASMRVLPHPLPLHCLRPAL*AASTHT Trigger: TGTGTGTGTACTGGCAGCCAACAGGGCTGGCCTGAG...GCAGTGGAGTGGGAGTGGGTGGGGGAGCACCCTCATAGAGGCAACGGGGAGCGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS TCA 90 bp | CGAATGCCTCCTGGGCGATGTGGCCCAGCTCGCTGCAGGAGAGGTTaGGAAGCCGCAGCGCTGGGAAGCATGCAAAGGTCCGTGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RMPPGRCGPARCRRG*EAAALGSMQRSVAA Trigger: TGCTGCCACGGACCTTTGCATGCTTCCCAGCGCTGCGGCTTCTCAACCTCTCCTGCAGCGAGCTGGGCCACATCGCCCAGGAGGCATTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS CCA 90 bp | GATGTGGCCCAGCTCGCTGCAGGAGAGGTTGAGAAGCCGCAGCGCTaGGAAGCATGCAAAGGTCCGTGGCAGCAGCGCTCGCAGTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: DVAQLAAGEVEKPQR*EACKGPWQQRSQWV Trigger: AACCCACTGCGAGCGCTGCTGCCACGGACCTTTGCATGCTTCCCAGCGCTGCGGCTTCTCAACCTCTCCTGCAGCGAGCTGGGCCACATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS CCA 90 bp | AGTCGGAAGAGGGGGATCCGGTCCTGGGAGATCCTTTCCAGGCTCTaGCTCTGCGCCATCAGCAGTTGTAGCAGGAGCTGCAGCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SRKRGIRSWEILSRL*LCAISSCSRSCSSC Trigger: GCAGCTGCTGCAGCTCCTGCTACAACTGCTGATGGCGCAGAGCCAGAGCCTGGAAAGGATCTCCCAGGACCGGATCCCCCTCTTCCGACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS GCA 90 bp | CAGATGCTTGCAGGGGTGGTATTCACAAGAGACGTCCTGGGGAGGTaGCGCCACCTGGTCCCGAGTCTCCTCCTCCTCGCTGTCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: QMLAGVVFTRDVLGR*RHLVPSLLLLAVII Trigger: GATGATGACAGCGAGGAGGAGGAGACTCGGGACCAGGTGGCGGCACCTCCCCAGGACGTCTCTTGTGAATACCACCCCTGCAAGCATCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS GCA 90 bp | CCCACTGAGACCAGGGCAACGGCATCTGAAGCGCCTCTGCAGCTCTaGGCACGGGGTCTGCAGATGCTTGCAGGGGTGGTATTCACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PTETRATASEAPLQL*ARGLQMLAGVVFTR Trigger: TCTTGTGAATACCACCCCTGCAAGCATCTGCAGACCCCGTGCGCAGAGCTGCAGAGGCGCTTCAGATGCCGTTGCCCTGGTCTCAGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS GCA 90 bp | CACCAGTGGACGAGCACTGATGTGTCAGTCACCTCTGACACCCCCTaGAGCGTGGGAGGGTCTGGAGTGGTATCCTCCCCACTGAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: HQWTSTDVSVTSDTP*SVGGSGVVSSPLRP Trigger: TGGTCTCAGTGGGGAGGATACCACTCCAGACCCTCCCACGCTGCAGGGGGTGTCAGAGGTGACTGACACATCAGTGCTCGTCCACTGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS CCA 90 bp | ACCTCCTCCAGCCTGAGGTCTGTGACTGGCTCAGGCCAGCCCTGTTaGCTGCCAGTACACACACATGGTAGGTGGTGCCAGGTGTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TSSSLRSVTGSGQPC*LPVHTHGRWCQVSA Trigger: AGCTGACACCTGGCACCACCTACCATGTGTGTGTACTGGCAGCCAACAGGGCTGGCCTGAGCCAGTCACAGACCTCAGGCTGGAGGAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR CAA 90 bp | CCGCTCCCCGTTGCCTCTATGAGGGTGCTCCCCCACCCACTCCCACTCCACTGCCTTGGTGATATTTTGTaGGCTTCCTCCAGGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLPVASMRVLPHPLPLHCLGDIL*ASSRLS Trigger: GCTCAGCCTGGAGGAAGCCAACAAAATATCACCAAG...GCAGTGGAGTGGGAGTGGGTGGGGGAGCACCCTCATAGAGGCAACGGGGAGCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS TCA 90 bp | TCTGTGTGGAGAGCCCTGGGCGTGGCTTGTGTCCTCTGCTTGGTCTaGGGTAAGCTCCTGGGGTTTGGTGAAGTAGGCAAGGGTTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SVWRALGVACVLCLV*GKLLGFGEVGKGSR Trigger: CCTTGAACCCTTGCCTACTTCACCAAACCCCAGGAGCTTACCTCAGACCAAGCAGAGGACACAAGCCACGCCCAGGGCTCTCCACACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS CCA 90 bp | GCAAAACTGGAATCTCATCCTGTGGAGGGTCTGTGTGGAGAGCCCTaGGCGTGGCTTGTGTCCTCTGCTTGGTCTGAGGTAAGCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AKLESHPVEGLCGEP*AWLVSSAWSEVSSW Trigger: CCAGGAGCTTACCTCAGACCAAGCAGAGGACACAAGCCACGCCCAGGGCTCTCCACACAGACCCTCCACAGGATGAGATTCCAGTTTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS CCA 90 bp | TGGGTTTTTGAAGGCCACCAGGTGTGTGTCGTAGAACTGCCTGTGTaGCTTCCAGCGCTGCCTCCAGAGACACACAGACAGCACCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: WVFEGHQVCVVELPV*LPALPPETHRQHQG Trigger: ACCCTGGTGCTGTCTGTGTGTCTCTGGAGGCAGCGCTGGAAGCCACACAGGCAGTTCTACGACACACACCTGGTGGCCTTCAAAAACCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR CAA 90 bp | CCGCTCCCCGTTGCCTCTATGAGGGTGCTCCCCCACCCACTCCCACTCCACTGCTGTAAGACAGTTTTGTaGACATCCACGAGAAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: PLPVASMRVLPHPLPLHCCKTVL*TSTRSQ Trigger: TTGGCTTCTCGTGGATGTCAACAAAACTGTCTTACA...GCAGTGGAGTGGGAGTGGGTGGGGGAGCACCCTCATAGAGGCAACGGGGAGCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS CCA 90 bp | GTCCTTCTGCCACATAGTGGATCTGATACCAGAGCACCACTGAGTTaGGGGCACACCAGTGGACGAGCACTGATGTGTCAGTCACCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VLLPHSGSDTRAPLS*GHTSGRALMCQSPL Trigger: CAGAGGTGACTGACACATCAGTGCTCGTCCACTGGTGTGCCCCCAACTCAGTGGTGCTCTGGTATCAGATCCACTATGTGGCAGAAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS TCA 90 bp | CTGGAGAGTCTCCACAATCCAGCTGCCGCAGGTTGGGAGTCATCTTaGAAATGTCTCCCTCCAGTGTCTTCAGCCTGGGCATCTTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LESLHNPAAAGWESS*KCLPPVSSAWASFS Trigger: TGAGAAAGATGCCCAGGCTGAAGACACTGGAGGGAGACATTTTCAAGATGACTCCCAACCTGCGGCAGCTGGATTGTGGAGACTCTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR CAA 90 bp | CTTGCTGTCTGCAGCATGGTGTTTGTGCTACAGCCTGTTTTGAAGATGAGAGATCAGAGCACCACTGAGTaGGGGGCACACCAGTGGACG | + |
|
Preference number: 5 (lower is better) Translates to: LAVCSMVFVLQPVLKMRDQSTTE*GAHQWT Trigger: CGTCCACTGGTGTGCCCCCAACTCAGTGGTGCTCTG...ATCTCTCATCTTCAAAACAGGCTGTAGCACAAACACCATGCTGCAGACAGCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR CAA 90 bp | TGTGTGAGCCTGAGACATGGTGGCTTCAGGGAATTTGAAGCTCATGTTGTCCTTGGGGTCTGCAGATGCTaGCAGGGGTGGTATTCACAA | + |
|
Preference number: 5 (lower is better) Translates to: CVSLRHGGFREFEAHVVLGVCRC*QGWYSQ Trigger: TTGTGAATACCACCCCTGCAAGCATCTGCAGACCCC...AAGGACAACATGAGCTTCAAATTCCCTGAAGCCACCATGTCTCAGGCTCACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR CAA 90 bp | ATCATTCCATTCGTTTACTTCTCAAATGATATCCCTCTTCCTGGTTCCTCTTCCAGCCCTGGGCGTGGCTaGTGTCCTCTGCTTGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: IIPFVYFSNDIPLPGSSSSPGRG*CPLLGL Trigger: CAGACCAAGCAGAGGACACAAGCCACGCCCAGGGCT...GGAAGAGGAACCAGGAAGAGGGATATCATTTGAGAAGTAAACGAATGGAATGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR CAA 90 bp | TCAAGGCCTCAAATGTGTCTGATTTGGATGTTGGGGATAAACCCAAGGCCTTGTCTGCAAATGAGAGGGTaGCCAAAGAGACTGACGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SRPQMCLIWMLGINPRPCLQMRG*PKRLTD Trigger: GTCCGTCAGTCTCTTTGGCAACCCTCTCATTTGCAG...ACAAGGCCTTGGGTTTATCCCCAACATCCAAATCAGACACATTTGAGGCCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR CAA 90 bp | ACTGCCTTTGTAAGTTTTAAAGTGGGATTTAGAGAGATCTTTCAAATTCTCCTGTCGCTGCAGGAGAGGTaGAGAAGCCGCAGCGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TAFVSFKVGFREIFQILLSLQER*RSRSAG Trigger: CCCAGCGCTGCGGCTTCTCAACCTCTCCTGCAGCGA...CAGGAGAATTTGAAAGATCTCTCTAAATCCCACTTTAAAACTTACAAAGGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR CAA 90 bp | ACAACTTTTCCTTACAATAGAAATAAGCACTGTTGTGAGTTCAATTTTGCCTCCCGAAGCGGCCTGGGTTaGAAGGCAGGAGGGTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TTFPYNRNKHCCEFNFASRSGLG*KAGGWC Trigger: GCACCACCCTCCTGCCTTCAAACCCAGGCCGCTTCG...GGAGGCAAAATTGAACTCACAACAGTGCTTATTTCTATTGTAAGGAAAAGTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR CAA 90 bp | ATCAAGGCCTCAAATGTGTCTGATTTGGATGTTGGGGATAAACCCAAGGCCTTGGTGAGGGAAGGGACCTaGGTGATATTTTGTTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: IKASNVSDLDVGDKPKALVREGT*VIFCWL Trigger: AAGCCAACAAAATATCACCAAGGTCCCTTCCCTCAC...CAAGGCCTTGGGTTTATCCCCAACATCCAAATCAGACACATTTGAGGCCTTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR CAA 90 bp | TTTCCTTACAATAGAAATAAGCACTGTTGTGAGTTCAATTTTGCCTCCGCTCCACTCAGGAAGAGGGACTaGAGCTTTGGCAGGTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FPYNRNKHCCEFNFASAPLRKRD*SFGRFL Trigger: CAGAAACCTGCCAAAGCTCAAGTCCCTCTTCCTGAG...TGGAGCGGAGGCAAAATTGAACTCACAACAGTGCTTATTTCTATTGTAAGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR CAA 90 bp | ATTCCATTCGTTTACTTCTCAAATGATATCCCTCTTCCTGGTTCCTCTTCCACAAGGTTGGGAGTCATCTaGAAAATGTCTCCCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: IPFVYFSNDIPLPGSSSTRLGVI*KMSPSS Trigger: ACTGGAGGGAGACATTTTCAAGATGACTCCCAACCT...TGTGGAAGAGGAACCAGGAAGAGGGATATCATTTGAGAAGTAAACGAATGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS-3UTR CAA 90 bp | GAAATACATGTTTTGACACACCCTGAAATACAAGTAAGAATCCAGAAGGCCTTAACCACAGAGCTGGGCTaGGTTGTGAAAGTGGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: EIHVLTHPEIQVRIQKALTTELG*VVKVAH Trigger: ATGTGCCACTTTCACAACCAAGCCCAGCTCTGTGGT...TAAGGCCTTCTGGATTCTTACTTGTATTTCAGGGTGTGTCAAAACATGTATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR CAA 90 bp | ACAACTTTTCCTTACAATAGAAATAAGCACTGTTGTGAGTTCAATTTTGCCTCCTCCAGCTGCCGCAGGTaGGGAGTCATCTTGAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: TTFPYNRNKHCCEFNFASSSCRR*GVILKM Trigger: CATTTTCAAGATGACTCCCAACCTGCGGCAGCTGGA...GGAGGCAAAATTGAACTCACAACAGTGCTTATTTCTATTGTAAGGAAAAGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR CAA 90 bp | GAAATACATGTTTTGACACACCCTGAAATACAAGTAAGAATCCAGAAGGCCTTAGACCTTGGTGATATTTaGTTGGCTTCCTCCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EIHVLTHPEIQVRIQKALDLGDI*LASSRL Trigger: CAGCCTGGAGGAAGCCAACAAAATATCACCAAGGTC...TAAGGCCTTCTGGATTCTTACTTGTATTTCAGGGTGTGTCAAAACATGTATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS-3UTR CAA 90 bp | ACAACTTTTCCTTACAATAGAAATAAGCACTGTTGTGAGTTCAATTTTGCCTCCAAGGGTTCAAGGTACTaGCTGACTAATGGGGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TTFPYNRNKHCCEFNFASKGSRY*LTNGVE Trigger: CTCTACCCCATTAGTCAGCAAGTACCTTGAACCCTT...GGAGGCAAAATTGAACTCACAACAGTGCTTATTTCTATTGTAAGGAAAAGTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS CAA 72 bp | CGGCCGAGCACAGGCTCGCTAAGGGCGCGCAGCAGGTaGTGGCTGCCATCGAGGCTGCGCAGCGTGCGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RPSTGSLRARSR*WLPSRLRSVRG Trigger: GCCGCGCACGCTGCGCAGCCTCGATGGCAGCCACAACCTGCTGCGCGCCCTTAGCGAGCCTGTGCTCGGCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS CAA 90 bp | TCGGGCAGGCGGCCGAGCACAGGCTCGCTAAGGGCGCGCAGCAGGTaGTGGCTGCCATCGAGGCTGCGCAGCGTGCGCGGCAGGCAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: SGRRPSTGSLRARSR*WLPSRLRSVRGRQL Trigger: TAGCTGCCTGCCGCGCACGCTGCGCAGCCTCGATGGCAGCCACAACCTGCTGCGCGCCCTTAGCGAGCCTGTGCTCGGCCGCCTGCCCGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS CCA 72 bp | CCGAGCACAGGCTCGCTAAGGGCGCGCAGCAGGTTGTaGCTGCCATCGAGGCTGCGCAGCGTGCGCGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PSTGSLRARSRL*LPSRLRSVRGR Trigger: CCTGCCGCGCACGCTGCGCAGCCTCGATGGCAGCCACAACCTGCTGCGCGCCCTTAGCGAGCCTGTGCTCGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS TCA 72 bp | CCGCGCAGGGCGGCAGCTCGGTCAGCAGGTTGTGACTaGGGTCGAGCTCACGCAGCTCGGCCAGCGTGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PRRAAARSAGCD*GRAHAARPACH Trigger: GTGACACGCTGGCCGAGCTGCGTGAGCTCGACCTCAGTCACAACCTGCTGACCGAGCTGCCGCCCTGCGCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS GCA 72 bp | TCACGGCCCCAGTGTAGCACGGAGATGCGGTTGTGGTaGAGCGTGAGTACGCGCAGCTCGGGCAGGCGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SRPQCSTEMRLW*SVSTRSSGRRP Trigger: CGGCCGCCTGCCCGAGCTGCGCGTACTCACGCTGCACCACAACCGCATCTCCGTGCTACACTGGGGCCGTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS CCA 72 bp | CCACCGTCCACCCCCGCGAATGCCTCCTGGGCGATGTaGCCCAGCTCGCTGCAGGAGAGGTTGAGAAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: PPSTPANASWAM*PSSLQERLRSR Trigger: GCGGCTTCTCAACCTCTCCTGCAGCGAGCTGGGCCACATCGCCCAGGAGGCATTCGCGGGGGTGGACGGTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS TCA 72 bp | CCCAGTGTAGCACGGAGATGCGGTTGTGGTGCAGCGTaGGTACGCGCAGCTCGGGCAGGCGGCCGAGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: PSVARRCGCGAA*VRAARAGGRAQ Trigger: CTGTGCTCGGCCGCCTGCCCGAGCTGCGCGTACTCACGCTGCACCACAACCGCATCTCCGTGCTACACTGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS CCA 72 bp | GTGTCACGGCCCCAGTGTAGCACGGAGATGCGGTTGTaGTGCAGCGTGAGTACGCGCAGCTCGGGCAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: VSRPQCSTEMRL*CSVSTRSSGRR Trigger: CCGCCTGCCCGAGCTGCGCGTACTCACGCTGCACCACAACCGCATCTCCGTGCTACACTGGGGCCGTGACAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS TCA 72 bp | GGTGGCGGTCGAGGCTGTCCCAGTCTCCCTGCTGAGTaGGTCGGAAGAGGGGGATCCGGTCCTGGGAGATCC | + |
|
Preference number: 6 (lower is better) Translates to: GGGRGCPSLPAE*VGRGGSGPGRS Trigger: GGATCTCCCAGGACCGGATCCCCCTCTTCCGACTCACTCAGCAGGGAGACTGGGACAGCCTCGACCGCCACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS TCA 72 bp | GTAGGGTGGCGGTCGAGGCTGTCCCAGTCTCCCTGCTaGGTGAGTCGGAAGAGGGGGATCCGGTCCTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VGWRSRLSQSPC*VSRKRGIRSWE Trigger: CTCCCAGGACCGGATCCCCCTCTTCCGACTCACTCAGCAGGGAGACTGGGACAGCCTCGACCGCCACCCTAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS TCA 72 bp | CCTGGGCGATGTGGCCCAGCTCGCTGCAGGAGAGGTTaGGAAGCCGCAGCGCTGGGAAGCATGCAAAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PGRCGPARCRRG*EAAALGSMQRS Trigger: GGACCTTTGCATGCTTCCCAGCGCTGCGGCTTCTCAACCTCTCCTGCAGCGAGCTGGGCCACATCGCCCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS GCA 72 bp | GCAGGGGTGGTATTCACAAGAGACGTCCTGGGGAGGTaGCGCCACCTGGTCCCGAGTCTCCTCCTCCTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: AGVVFTRDVLGR*RHLVPSLLLLA Trigger: AGCGAGGAGGAGGAGACTCGGGACCAGGTGGCGGCACCTCCCCAGGACGTCTCTTGTGAATACCACCCCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS CCA 72 bp | CAGCTCGCTGCAGGAGAGGTTGAGAAGCCGCAGCGCTaGGAAGCATGCAAAGGTCCGTGGCAGCAGCGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: QLAAGEVEKPQR*EACKGPWQQRS Trigger: CGAGCGCTGCTGCCACGGACCTTTGCATGCTTCCCAGCGCTGCGGCTTCTCAACCTCTCCTGCAGCGAGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS TCA 72 bp | GGCTCTCCAGGCTGCGGTTCGCCAAGTTCAGAGTGGTaGCTCCCGCGGCGGGGAGTCCTACACAGAGAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GSPGCGSPSSEW*LPRRGVLHRES Trigger: ACTCTCTCTGTGTAGGACTCCCCGCCGCGGGAGTCACCACTCTGAACTTGGCGAACCGCAGCCTGGAGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS GCA 72 bp | ACCAGGGCAACGGCATCTGAAGCGCCTCTGCAGCTCTaGGCACGGGGTCTGCAGATGCTTGCAGGGGTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: TRATASEAPLQL*ARGLQMLAGVV Trigger: TACCACCCCTGCAAGCATCTGCAGACCCCGTGCGCAGAGCTGCAGAGGCGCTTCAGATGCCGTTGCCCTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS GCA 72 bp | CCACTGAGACCAGGGCAACGGCATCTGAAGCGCCTCTaGAGCTCTGCGCACGGGGTCTGCAGATGCTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PLRPGQRHLKRL*SSAHGVCRCLQ Trigger: CTGCAAGCATCTGCAGACCCCGTGCGCAGAGCTGCAGAGGCGCTTCAGATGCCGTTGCCCTGGTCTCAGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS CCA 72 bp | AGATGCTTGCAGGGGTGGTATTCACAAGAGACGTCCTaGGGAGGTGCCGCCACCTGGTCCCGAGTCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RCLQGWYSQETS*GGAATWSRVSS Trigger: GGAGGAGACTCGGGACCAGGTGGCGGCACCTCCCCAGGACGTCTCTTGTGAATACCACCCCTGCAAGCATCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
||
| CDS GCA 72 bp | AAGCGCCTCTGCAGCTCTGCGCACGGGGTCTGCAGATaGTTGCAGGGGTGGTATTCACAAGAGACGTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: KRLCSSAHGVCR*LQGWYSQETSW Trigger: CCAGGACGTCTCTTGTGAATACCACCCCTGCAAGCATCTGCAGACCCCGTGCGCAGAGCTGCAGAGGCGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS CCA 72 bp | CATCCTGTGGAGGGTCTGTGTGGAGAGCCCTGGGCGTaGCTTGTGTCCTCTGCTTGGTCTGAGGTAAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: HPVEGLCGEPWA*LVSSAWSEVSS Trigger: GGAGCTTACCTCAGACCAAGCAGAGGACACAAGCCACGCCCAGGGCTCTCCACACAGACCCTCCACAGGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS CCA 72 bp | CAGCCCTGTTGGCTGCCAGTACACACACATGGTAGGTaGTGCCAGGTGTCAGCTTGTACAGGGGGTGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: QPCWLPVHTHGR*CQVSACTGGAA Trigger: GGCAGCACCCCCTGTACAAGCTGACACCTGGCACCACCTACCATGTGTGTGTACTGGCAGCCAACAGGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS CCA 72 bp | AGCCTGAGGTCTGTGACTGGCTCAGGCCAGCCCTGTTaGCTGCCAGTACACACACATGGTAGGTGGTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: SLRSVTGSGQPC*LPVHTHGRWCQ Trigger: CTGGCACCACCTACCATGTGTGTGTACTGGCAGCCAACAGGGCTGGCCTGAGCCAGTCACAGACCTCAGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS GCA 72 bp | CATCTGAAGCGCCTCTGCAGCTCTGCGCACGGGGTCTaGAGATGCTTGCAGGGGTGGTATTCACAAGAGACG | + |
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Preference number: 6 (lower is better) Translates to: HLKRLCSSAHGV*RCLQGWYSQET Trigger: CGTCTCTTGTGAATACCACCCCTGCAAGCATCTGCAGACCCCGTGCGCAGAGCTGCAGAGGCGCTTCAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS CCA 72 bp | TATTCACAAGAGACGTCCTGGGGAGGTGCCGCCACCTaGTCCCGAGTCTCCTCCTCCTCGCTGTCATCATCT | + |
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Preference number: 6 (lower is better) Translates to: YSQETSWGGAAT*SRVSSSSLSSS Trigger: AGATGATGACAGCGAGGAGGAGGAGACTCGGGACCAGGTGGCGGCACCTCCCCAGGACGTCTCTTGTGAATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS CAA 90 bp | CCACTGGCGGTACACAGTCCCCAGAAGATGACCACAGAGCTGGGCTaGGTTGTGAAAGTGGCACATGACCTCCTCCAGCCTGAGGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: PLAVHSPQKMTTELG*VVKVAHDLLQPEVC Trigger: ACAGACCTCAGGCTGGAGGAGGTCATGTGCCACTTTCACAACCAAGCCCAGCTCTGTGGTCATCTTCTGGGGACTGTGTACCGCCAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS TCA 72 bp | AGAGCCCTGGGCGTGGCTTGTGTCCTCTGCTTGGTCTaGGGTAAGCTCCTGGGGTTTGGTGAAGTAGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: RALGVACVLCLV*GKLLGFGEVGK Trigger: CTTGCCTACTTCACCAAACCCCAGGAGCTTACCTCAGACCAAGCAGAGGACACAAGCCACGCCCAGGGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS CCA 72 bp | AAGCGGCCTGGGTTTGAAGGCAGGAGGGTGGTGCTTTaGTCTGACCTGCACACATTAGACAGGTGGGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: KRPGFEGRRVVL*SDLHTLDRWER Trigger: CCTCTCCCACCTGTCTAATGTGTGCAGGTCAGACCAAAGCACCACCCTCCTGCCTTCAAACCCAGGCCGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS CCA 72 bp | GAATCTCATCCTGTGGAGGGTCTGTGTGGAGAGCCCTaGGCGTGGCTTGTGTCCTCTGCTTGGTCTGAGGTA | + |
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Preference number: 6 (lower is better) Translates to: ESHPVEGLCGEP*AWLVSSAWSEV Trigger: TACCTCAGACCAAGCAGAGGACACAAGCCACGCCCAGGGCTCTCCACACAGACCCTCCACAGGATGAGATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS GCA 72 bp | TTTGTTGGCTTCCTCCAGGCTGAGCAGACAAGGCCGTaGTCTGTTCAATGGAAGGCCCCTGTATCCGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: FVGFLQAEQTRP*SVQWKAPVSVV Trigger: CACCACGGATACAGGGGCCTTCCATTGAACAGAGCACGGCCTTGTCTGCTCAGCCTGGAGGAAGCCAACAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS CCA 72 bp | AGCAAAACTGGAATCTCATCCTGTGGAGGGTCTGTGTaGAGAGCCCTGGGCGTGGCTTGTGTCCTCTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: SKTGISSCGGSV*RALGVACVLCL Trigger: CAAGCAGAGGACACAAGCCACGCCCAGGGCTCTCCACACAGACCCTCCACAGGATGAGATTCCAGTTTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS TCA 72 bp | ATGGAAGGCCCCTGTATCCGTGGTGCAAAAACTGAATaGTCGAAGCGGCCTGGGTTTGAAGGCAGGAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: MEGPCIRGAKTE*SKRPGFEGRRV Trigger: CACCCTCCTGCCTTCAAACCCAGGCCGCTTCGATCATTCAGTTTTTGCACCACGGATACAGGGGCCTTCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS CCA 72 bp | CAAGGATATGTGTGGCAGTCTGCTCTGCCCCAGAACTaGCAGCACCAGGCAGAGCCCTGGAAGGACTATAAA | + |
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Preference number: 6 (lower is better) Translates to: QGYVWQSALPQN*QHQAEPWKDYK Trigger: TTTATAGTCCTTCCAGGGCTCTGCCTGGTGCTGCCAGTTCTGGGGCAGAGCAGACTGCCACACATATCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS CCA 72 bp | CCACATAGTGGATCTGATACCAGAGCACCACTGAGTTaGGGGCACACCAGTGGACGAGCACTGATGTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: PHSGSDTRAPLS*GHTSGRALMCQ Trigger: CTGACACATCAGTGCTCGTCCACTGGTGTGCCCCCAACTCAGTGGTGCTCTGGTATCAGATCCACTATGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS CAA 72 bp | GTACACAGTCCCCAGAAGATGACCACAGAGCTGGGCTaGGTTGTGAAAGTGGCACATGACCTCCTCCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: VHSPQKMTTELG*VVKVAHDLLQP Trigger: AGGCTGGAGGAGGTCATGTGCCACTTTCACAACCAAGCCCAGCTCTGTGGTCATCTTCTGGGGACTGTGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS CAA 90 bp | GCTGGAGAGTCTCCACAATCCAGCTGCCGCAGGTTGGGAGTCATCTaGAAAATGTCTCCCTCCAGTGTCTTCAGCCTGGGCATCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: AGESPQSSCRRLGVI*KMSPSSVFSLGIFL Trigger: GAGAAAGATGCCCAGGCTGAAGACACTGGAGGGAGACATTTTCAAGATGACTCCCAACCTGCGGCAGCTGGATTGTGGAGACTCTCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS TCA 72 bp | CCCACTGAGTTACTTCCTCAGCTCTGGCTGGGTTTTTaGAGGCCACCAGGTGTGTGTCGTAGAACTGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: PTELLPQLWLGF*RPPGVCRRTAC Trigger: ACAGGCAGTTCTACGACACACACCTGGTGGCCTTCAAAAACCCAGCCAGAGCTGAGGAAGTAACTCAGTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS GCA 72 bp | GATGAAATATTAGGCTCAAGGATATGTGTGGCAGTCTaGTCTGCCCCAGAACTGGCAGCACCAGGCAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: DEILGSRICVAV*SAPELAAPGRA Trigger: GGCTCTGCCTGGTGCTGCCAGTTCTGGGGCAGAGCAGACTGCCACACATATCCTTGAGCCTAATATTTCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS CAA 72 bp | AGTGCTGGAGAGTCTCCACAATCCAGCTGCCGCAGGTaGGGAGTCATCTTGAAAATGTCTCCCTCCAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: SAGESPQSSCRR*GVILKMSPSSV Trigger: GACACTGGAGGGAGACATTTTCAAGATGACTCCCAACCTGCGGCAGCTGGATTGTGGAGACTCTCCAGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS CAA 72 bp | AGAAGCCAAGCCAGCTCACAGCTGCAAATGAGAGGGTaGCCAAAGAGACTGACGGACAAGACCTGGGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: RSQASSQLQMRG*PKRLTDKTWEE Trigger: TTCCTCCCAGGTCTTGTCCGTCAGTCTCTTTGGCAACCCTCTCATTTGCAGCTGTGAGCTGGCTTGGCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS CAA 72 bp | AGTCATGGTGAGGGAAGGGACCTTGGTGATATTTTGTaGGCTTCCTCCAGGCTGAGCAGACAAGGCCGTGCT | + |
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Preference number: 6 (lower is better) Translates to: SHGEGRDLGDIL*ASSRLSRQGRA Trigger: AGCACGGCCTTGTCTGCTCAGCCTGGAGGAAGCCAACAAAATATCACCAAGGTCCCTTCCCTCACCATGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS CAA 90 bp | ACATCCACGAGAAGCCAAGCCAGCTCACAGCTGCAAATGAGAGGGTaGCCAAAGAGACTGACGGACAAGACCTGGGAGGAATTCCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: TSTRSQASSQLQMRG*PKRLTDKTWEEFQG Trigger: TCCTTGGAATTCCTCCCAGGTCTTGTCCGTCAGTCTCTTTGGCAACCCTCTCATTTGCAGCTGTGAGCTGGCTTGGCTTCTCGTGGATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS CAA 90 bp | TGTGGGGGAAGTCATGGTGAGGGAAGGGACCTTGGTGATATTTTGTaGGCTTCCTCCAGGCTGAGCAGACAAGGCCGTGCTCTGTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: CGGSHGEGRDLGDIL*ASSRLSRQGRALFN Trigger: ATTGAACAGAGCACGGCCTTGTCTGCTCAGCCTGGAGGAAGCCAACAAAATATCACCAAGGTCCCTTCCCTCACCATGACTTCCCCCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS CAA 90 bp | ACAGAAGTAAGTGCTGGAGAGTCTCCACAATCCAGCTGCCGCAGGTaGGGAGTCATCTTGAAAATGTCTCCCTCCAGTGTCTTCAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: TEVSAGESPQSSCRR*GVILKMSPSSVFSL Trigger: CAGGCTGAAGACACTGGAGGGAGACATTTTCAAGATGACTCCCAACCTGCGGCAGCTGGATTGTGGAGACTCTCCAGCACTTACTTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS GCA 72 bp | ACAGAAGTAAGTGCTGGAGAGTCTCCACAATCCAGCTaGCGCAGGTTGGGAGTCATCTTGAAAATGTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: TEVSAGESPQSS*RRLGVILKMSP Trigger: GGGAGACATTTTCAAGATGACTCCCAACCTGCGGCAGCTGGATTGTGGAGACTCTCCAGCACTTACTTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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| CDS CAA 72 bp | CACATGGTATCAGCTGCCCTGTGTAAGACAGTTTTGTaGACATCCACGAGAAGCCAAGCCAGCTCACAGCTG | + |
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Preference number: 6 (lower is better) Translates to: HMVSAALCKTVL*TSTRSQASSQL Trigger: CAGCTGTGAGCTGGCTTGGCTTCTCGTGGATGTCAACAAAACTGTCTTACACAGGGCAGCTGATACCATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049787.3 |
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