Pregenerated sensors for LRRN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026443Ensembl transcript IDs: ENSMUST00000027706.4
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCGAACCCCATCTTTCTTGGTCAAGCTGCCAGGCCTCAAGCACGTaGATCAATCAACGCCACGTTCCTGGCAGGCATCTGGCCCAGATC | + |
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Preference number: 1 (lower is better) Translates to: AEPHLSWSSCQASST*INQRHVPGRHLAQI Trigger: GATCTGGGCCAGATGCCTGCCAGGAACGTGGCGTTGATTGATCCACGTGCTTGAGGCCTGGCAGCTTGACCAAGAAAGATGGGGTTCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| 3UTR CCA 90 bp | GGCATCCCTGGATACCTCTCTCTCCAAATATCCTTCAGATCCAGCTaGGGACACTCCTGCTTTTGGGGCAGGCTCCCAAGACAGGTAGGA | + |
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Preference number: 1 (lower is better) Translates to: GIPGYLSLQISFRSS*GHSCFWGRLPRQVG Trigger: TCCTACCTGTCTTGGGAGCCTGCCCCAAAAGCAGGAGTGTCCCCAGCTGGATCTGAAGGATATTTGGAGAGAGAGGTATCCAGGGATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| 3UTR CCA 90 bp | ATAGAAAGTCAACTTCAGAGCCCAGGCTATGAGATGAGGCATCCCTaGATACCTCTCTCTCCAAATATCCTTCAGATCCAGCTGGGGACA | + |
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Preference number: 1 (lower is better) Translates to: IESQLQSPGYEMRHP*IPLSPNILQIQLGT Trigger: TGTCCCCAGCTGGATCTGAAGGATATTTGGAGAGAGAGGTATCCAGGGATGCCTCATCTCATAGCCTGGGCTCTGAAGTTGACTTTCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| 3UTR CAA 90 bp | CTCTCTCCAAATATCCTTCAGATCCAGCTGGGGACACTCCTGCTTTaGGGGCAGGCTCCCAAGACAGGTAGGAGAAGCCTCTTTCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: LSPNILQIQLGTLLL*GQAPKTGRRSLFQP Trigger: GGGCTGAAAGAGGCTTCTCCTACCTGTCTTGGGAGCCTGCCCCAAAAGCAGGAGTGTCCCCAGCTGGATCTGAAGGATATTTGGAGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| 3UTR CAA 90 bp | ATTGGGTTGGGGACAGGTGACACATTTCTCCACAAAGATACAAAATaGCCTATAGAAAGTCAACTTCAGAGCCCAGGCTATGAGATGAGG | + |
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Preference number: 2 (lower is better) Translates to: IGLGTGDTFLHKDTK*PIESQLQSPGYEMR Trigger: CCTCATCTCATAGCCTGGGCTCTGAAGTTGACTTTCTATAGGCAATTTTGTATCTTTGTGGAGAAATGTGTCACCTGTCCCCAACCCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| 3UTR CCA 72 bp | CATCTTTCTTGGTCAAGCTGCCAGGCCTCAAGCACGTaGATCAATCAACGCCACGTTCCTGGCAGGCATCTG | + |
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Preference number: 3 (lower is better) Translates to: HLSWSSCQASST*INQRHVPGRHL Trigger: CAGATGCCTGCCAGGAACGTGGCGTTGATTGATCCACGTGCTTGAGGCCTGGCAGCTTGACCAAGAAAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR TCA 90 bp | GGCAGGCTCCCAAGACAGGTAGGAGAAGCCTCTTTCAGCCCTTGCCCAGGAGGGGAGCCAGGATGGCTATaGGCCCGGGCCGGTCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: GRLPRQVGEASFSPCPGGEPGWL*ARAGPP Trigger: TGGGGGACCGGCCCGGGCTCATAGCCATCCTGGCTC...CCCTCCTGGGCAAGGGCTGAAAGAGGCTTCTCCTACCTGTCTTGGGAGCCTGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR TCA 90 bp | GTGGATCAATCAACGCCACGTTCCTGGCAGGCATCTGGCCCAGATCACGTCCCGCGGACTGGGCGGCGCTaGAGGTCTGGAGGCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: VDQSTPRSWQASGPDHVPRTGRR*RSGGSA Trigger: TGCTGAGCCTCCAGACCTTCAGCGCCGCCCAGTCCG...CGGGACGTGATCTGGGCCAGATGCCTGCCAGGAACGTGGCGTTGATTGATCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR GCA 90 bp | GGCAGGCTCCCAAGACAGGTAGGAGAAGCCTCTTTCAGCCCTTGCCCAGGAGGGGGCTGCAAGCCCAGCTaGCAGCAGGAGGACCGCAAG | + |
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Preference number: 4 (lower is better) Translates to: GRLPRQVGEASFSPCPGGGCKPS*QQEDRK Trigger: CTTGCGGTCCTCCTGCTGGCAGCTGGGCTTGCAGCC...CCCTCCTGGGCAAGGGCTGAAAGAGGCTTCTCCTACCTGTCTTGGGAGCCTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR CCA 90 bp | GGCCTCAAGCACGTGGATCAATCAACGCCACGTTCCTGGCAGGCATCTGGCCCATGGCCTCTGCCGAGGTaGGCTGCAAGCCCAGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: GLKHVDQSTPRSWQASGPWPLPR*AASPAA Trigger: GGCAGCTGGGCTTGCAGCCCACCTCGGCAGAGGCCA...TGGGCCAGATGCCTGCCAGGAACGTGGCGTTGATTGATCCACGTGCTTGAGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR TCA 90 bp | GTGGATCAATCAACGCCACGTTCCTGGCAGGCATCTGGCCCAGATCACGTCCCGATCTGGCAGGCACACTaGGGAGGGCAGGGCACACGC | + |
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Preference number: 4 (lower is better) Translates to: VDQSTPRSWQASGPDHVPIWQAH*GGQGTR Trigger: GCGTGTGCCCTGCCCTCCTCAGTGTGCCTGCCAGAT...CGGGACGTGATCTGGGCCAGATGCCTGCCAGGAACGTGGCGTTGATTGATCCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR GCA 90 bp | TTGGGGCAGGCTCCCAAGACAGGTAGGAGAAGCCTCTTTCAGCCCTTGCCCAGGCACAGCGGATGGGGTTaGCGTGGAGCCCCACCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LGQAPKTGRRSLFQPLPRHSGWG*RGAPPP Trigger: AGGAGGTGGGGCTCCACGGCAACCCCATCCGCTGTG...CCTGGGCAAGGGCTGAAAGAGGCTTCTCCTACCTGTCTTGGGAGCCTGCCCCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR CCA 90 bp | CTCCTCAGAATCACAGCCGAGGACCCCAGAAGGCAACAGCAACCATTTGGGGGCCCCCGCAGGGAGCCTTaGGGGCACTGCCGTCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: LLRITAEDPRRQQQPFGGPRREP*GHCRQE Trigger: TTCCTGACGGCAGTGCCCCCAAGGCTCCCTGCGGGG...GCCCCCAAATGGTTGCTGTTGCCTTCTGGGGTCCTCGGCTGTGATTCTGAGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR TCA 90 bp | GCTGCCAGGCCTCAAGCACGTGGATCAATCAACGCCACGTTCCTGGCAGGCATCAGCCCAGCGAAGCTGTaGTCCTCCAGCCGGTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: AARPQARGSINATFLAGISPAKL*SSSRFS Trigger: GCTGAACCGGCTGGAGGATCACAGCTTCGCTGGGCT...GATGCCTGCCAGGAACGTGGCGTTGATTGATCCACGTGCTTGAGGCCTGGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR TCA 90 bp | GGCCTCAAGCACGTGGATCAATCAACGCCACGTTCCTGGCAGGCATCTGGCCCACGTTGGCCCAGCGGATaGCACAGTCACAGCGGATGG | + |
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Preference number: 4 (lower is better) Translates to: GLKHVDQSTPRSWQASGPRWPSG*HSHSGW Trigger: CCATCCGCTGTGACTGTGTCATCCGCTGGGCCAACG...TGGGCCAGATGCCTGCCAGGAACGTGGCGTTGATTGATCCACGTGCTTGAGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR GCA 90 bp | GGACACTCTCCTCAGAATCACAGCCGAGGACCCCAGAAGGCAACAGCAACCATTCTGCCAGCACCAGGCTaGGCAGGTTGGCCAGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GHSPQNHSRGPQKATATILPAPG*AGWPGA Trigger: GGCCCCTGGCCAACCTGCGCAGCCTGGTGCTGGCAG...AATGGTTGCTGTTGCCTTCTGGGGTCCTCGGCTGTGATTCTGAGGAGAGTGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR GCA 90 bp | GGCCTCAAGCACGTGGATCAATCAACGCCACGTTCCTGGCAGGCATCTGGCCCATCTCCCGCAAGCTCATaGCTGCCAGCACCAGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GLKHVDQSTPRSWQASGPSPASS*LPAPGC Trigger: GCAGCCTGGTGCTGGCAGGCATGAGCTTGCGGGAGA...TGGGCCAGATGCCTGCCAGGAACGTGGCGTTGATTGATCCACGTGCTTGAGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR CCA 90 bp | TTGGGGCAGGCTCCCAAGACAGGTAGGAGAAGCCTCTTTCAGCCCTTGCCCAGGTTGTCCCTGCCTGGCTaGAAGGGAGCGTGGCCAACC | + |
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Preference number: 4 (lower is better) Translates to: LGQAPKTGRRSLFQPLPRLSLPG*KGAWPT Trigger: GGTTGGCCACGCTCCCTTCCAGCCAGGCAGGGACAA...CCTGGGCAAGGGCTGAAAGAGGCTTCTCCTACCTGTCTTGGGAGCCTGCCCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR TCA 90 bp | GGCAGGCTCCCAAGACAGGTAGGAGAAGCCTCTTTCAGCCCTTGCCCAGGAGGGTGTAGGCTCAGCAGCTaGGGCAGGGCTTGGAAATCG | + |
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Preference number: 4 (lower is better) Translates to: GRLPRQVGEASFSPCPGGCRLSS*GRAWKS Trigger: CGATTTCCAAGCCCTGCCTCAGCTGCTGAGCCTACA...CCCTCCTGGGCAAGGGCTGAAAGAGGCTTCTCCTACCTGTCTTGGGAGCCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR TCA 90 bp | AGGCCTCAAGCACGTGGATCAATCAACGCCACGTTCCTGGCAGGCATCTGGCCCGCCAGTGCCCGACAGTaGAGTACCGTGCTCTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RPQARGSINATFLAGIWPASARQ*STVLSP Trigger: TGGAGAGAGCACGGTACTTCACTGTCGGGCACTGGC...GGGCCAGATGCCTGCCAGGAACGTGGCGTTGATTGATCCACGTGCTTGAGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR TCA 90 bp | AGGAGCTGCCGAACCCCATCTTTCTTGGTCAAGCTGCCAGGCCTCAAGCACGTGTCGGTACCTCCTGCCTaGGCGAGCAGGTGTCAGTCG | + |
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Preference number: 4 (lower is better) Translates to: RSCRTPSFLVKLPGLKHVSVPPA*ASRCQS Trigger: CGACTGACACCTGCTCGCTCAGGCAGGAGGTACCGA...CACGTGCTTGAGGCCTGGCAGCTTGACCAAGAAAGATGGGGTTCGGCAGCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR GCA 90 bp | GCTGCCAGGCCTCAAGCACGTGGATCAATCAACGCCACGTTCCTGGCAGGCATCCAGGTTACCCAGCCCTaGAAAGGCCCTGGGGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: AARPQARGSINATFLAGIQVTQP*KGPGGD Trigger: ATCTCCCCCAGGGCCTTTGCAGGGCTGGGTAACCTG...GATGCCTGCCAGGAACGTGGCGTTGATTGATCCACGTGCTTGAGGCCTGGCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR CCA 90 bp | GCTGCCAGGCCTCAAGCACGTGGATCAATCAACGCCACGTTCCTGGCAGGCATCGGCTGGAAGGGAGCGTaGCCAACCACAACACTGACG | + |
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Preference number: 4 (lower is better) Translates to: AARPQARGSINATFLAGIGWKGA*PTTTLT Trigger: CGTCAGTGTTGTGGTTGGCCACGCTCCCTTCCAGCC...GATGCCTGCCAGGAACGTGGCGTTGATTGATCCACGTGCTTGAGGCCTGGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR TCA 90 bp | GGCAGGCTCCCAAGACAGGTAGGAGAAGCCTCTTTCAGCCCTTGCCCAGGAGGGGAACTCCAGCTGGGGTaGCCCAGTAGATCTCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: GRLPRQVGEASFSPCPGGELQLG*PSRSQV Trigger: AACCTGAGATCTACTGGGTCACCCCAGCTGGAGTTC...CCCTCCTGGGCAAGGGCTGAAAGAGGCTTCTCCTACCTGTCTTGGGAGCCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR CCA 90 bp | GGACACTCTCCTCAGAATCACAGCCGAGGACCCCAGAAGGCAACAGCAACCATTCGGATGGGGTTGCCGTaGAGCCCCACCTCCTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: GHSPQNHSRGPQKATATIRMGLP*SPTSCR Trigger: CCTACAGGAGGTGGGGCTCCACGGCAACCCCATCCG...AATGGTTGCTGTTGCCTTCTGGGGTCCTCGGCTGTGATTCTGAGGAGAGTGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR CCA 90 bp | TTGGACACTCTCCTCAGAATCACAGCCGAGGACCCCAGAAGGCAACAGCAACCACCACCACCCCCTGCTTaGACTGGCCTCTGCCGAGGT | + |
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Preference number: 4 (lower is better) Translates to: LDTLLRITAEDPRRQQQPPPPPA*TGLCRG Trigger: ACCTCGGCAGAGGCCAGTCCAAGCAGGGGGTGGTGG...TGGTTGCTGTTGCCTTCTGGGGTCCTCGGCTGTGATTCTGAGGAGAGTGTCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR TCA 90 bp | CTCCTCAGAATCACAGCCGAGGACCCCAGAAGGCAACAGCAACCATTTGGGGGCGCAGTCTCGGGCATCTaGGAAGCTGTTCTGGGACAG | + |
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Preference number: 4 (lower is better) Translates to: LLRITAEDPRRQQQPFGGAVSGI*EAVLGQ Trigger: CTGTCCCAGAACAGCTTCTCAGATGCCCGAGACTGC...GCCCCCAAATGGTTGCTGTTGCCTTCTGGGGTCCTCGGCTGTGATTCTGAGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR TCA 90 bp | TTGGGGCAGGCTCCCAAGACAGGTAGGAGAAGCCTCTTTCAGCCCTTGCCCAGGGCCGTGGGTTGTTGGTaGTGTCCAACTTGGTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LGQAPKTGRRSLFQPLPRAVGCW*CPTWSA Trigger: AGCTGACCAAGTTGGACATCACCAACAACCCACGGC...CCTGGGCAAGGGCTGAAAGAGGCTTCTCCTACCTGTCTTGGGAGCCTGCCCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR GCA 90 bp | TCTTTCTTGGTCAAGCTGCCAGGCCTCAAGCACGTGGATCAATCAACGCCACGTCCGCAAGCTCATGCCTaGCAGCACCAGGCTGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: SFLVKLPGLKHVDQSTPRPQAHA*QHQAAQ Trigger: CTGCGCAGCCTGGTGCTGGCAGGCATGAGCTTGCGG...ACGTGGCGTTGATTGATCCACGTGCTTGAGGCCTGGCAGCTTGACCAAGAAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR GCA 90 bp | TCTTTCTTGGTCAAGCTGCCAGGCCTCAAGCACGTGGATCAATCAACGCCACGTGCTTGGACTGGCCTCTaGCGAGGTGGGCTGCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: SFLVKLPGLKHVDQSTPRAWTGL*RGGLQA Trigger: GGCTTGCAGCCCACCTCGGCAGAGGCCAGTCCAAGC...ACGTGGCGTTGATTGATCCACGTGCTTGAGGCCTGGCAGCTTGACCAAGAAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR GCA 90 bp | ACCCCATCTTTCTTGGTCAAGCTGCCAGGCCTCAAGCACGTGGATCAATCAACGTCACCCACCACCCCCTaGTTGGACTGGCCTCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: TPSFLVKLPGLKHVDQSTSPTTP*LDWPLP Trigger: CGGCAGAGGCCAGTCCAAGCAGGGGGTGGTGGGTGA...CGTTGATTGATCCACGTGCTTGAGGCCTGGCAGCTTGACCAAGAAAGATGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR CCA 90 bp | GGACACTCTCCTCAGAATCACAGCCGAGGACCCCAGAAGGCAACAGCAACCATTCACAGTCACAGCGGATaGGGTTGCCGTGGAGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: GHSPQNHSRGPQKATATIHSHSG*GCRGAP Trigger: TGGGGCTCCACGGCAACCCCATCCGCTGTGACTGTG...AATGGTTGCTGTTGCCTTCTGGGGTCCTCGGCTGTGATTCTGAGGAGAGTGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR CCA 90 bp | GGACACTCTCCTCAGAATCACAGCCGAGGACCCCAGAAGGCAACAGCAACCATTTCGATGAAACGGACGTaGGTGCCCGTGGCGTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: GHSPQNHSRGPQKATATISMKRT*VPVALA Trigger: GGCCAACGCCACGGGCACCCACGTCCGTTTCATCGA...AATGGTTGCTGTTGCCTTCTGGGGTCCTCGGCTGTGATTCTGAGGAGAGTGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR CCA 90 bp | TTGGGGCAGGCTCCCAAGACAGGTAGGAGAAGCCTCTTTCAGCCCTTGCCCAGGGCCCCTACCAAGTTCTaGGCCACACAGGTGTATAGG | + |
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Preference number: 4 (lower is better) Translates to: LGQAPKTGRRSLFQPLPRAPTKF*ATQVYR Trigger: CCTATACACCTGTGTGGCCCAGAACTTGGTAGGGGC...CCTGGGCAAGGGCTGAAAGAGGCTTCTCCTACCTGTCTTGGGAGCCTGCCCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR CCA 90 bp | TTGGGGCAGGCTCCCAAGACAGGTAGGAGAAGCCTCTTTCAGCCCTTGCCCAGGATGGAGCTTCAGTCCTaGTCCTTTGTCCCTGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LGQAPKTGRRSLFQPLPRMELQS*SFVPAW Trigger: CCAGGCAGGGACAAAGGACCAGGACTGAAGCTCCAT...CCTGGGCAAGGGCTGAAAGAGGCTTCTCCTACCTGTCTTGGGAGCCTGCCCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR CCA 90 bp | GGCAGGCTCCCAAGACAGGTAGGAGAAGCCTCTTTCAGCCCTTGCCCAGGAGGGTGTGTCTCCTGCACATaGAGCTTCAGTCCTGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: GRLPRQVGEASFSPCPGGCVSCT*SFSPGP Trigger: AGGACCAGGACTGAAGCTCCATGTGCAGGAGACACA...CCCTCCTGGGCAAGGGCTGAAAGAGGCTTCTCCTACCTGTCTTGGGAGCCTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR TCA 90 bp | AGCCTCTTTCAGCCCTTGCCCAGGAGGGGGAGGAGCAAGCAACTGAGACTGTACACAGGTCCAGCTCTGTaGGGTTGGCCAAGTAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: SLFQPLPRRGRSKQLRLYTGPAL*GWPSRQ Trigger: TTGCCTACTTGGCCAACCTCACAGAGCTGGACCTGT...GTACAGTCTCAGTTGCTTGCTCCTCCCCCTCCTGGGCAAGGGCTGAAAGAGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR TCA 90 bp | CCTGTTCCTTGGACACTCTCCTCAGAATCACAGCCGAGGACCCCAGAAGGCAACTCAGGTCTAGGAACTTaGGCCCAGGCACCTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: PVPWTLSSESQPRTPEGNSGLGT*AQAPAP Trigger: TGGAGCAGGTGCCTGGGCTCAAGTTCCTAGACCTGA...GTTGCCTTCTGGGGTCCTCGGCTGTGATTCTGAGGAGAGTGTCCAAGGAACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR TCA 90 bp | AGCTGCCAGGCCTCAAGCACGTGGATCAATCAACGCCACGTTCCTGGCAGGCATAGGCGCGAGGATGGATaGAAGAAAGCCGTGGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: SCQASSTWINQRHVPGRHRREDG*KKAVGC Trigger: ACAACCCACGGCTTTCTTTCATCCATCCTCGCGCCT...ATGCCTGCCAGGAACGTGGCGTTGATTGATCCACGTGCTTGAGGCCTGGCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR GCA 90 bp | GGCAGGCTCCCAAGACAGGTAGGAGAAGCCTCTTTCAGCCCTTGCCCAGGAGGGAGGTTGGAATTGAGGTaGAGTCTCAGCAGGTTACCC | + |
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Preference number: 4 (lower is better) Translates to: GRLPRQVGEASFSPCPGGRLELR*SLSRLP Trigger: GGGTAACCTGCTGAGACTGCACCTCAATTCCAACCT...CCCTCCTGGGCAAGGGCTGAAAGAGGCTTCTCCTACCTGTCTTGGGAGCCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR CCA 90 bp | TCTTTCTTGGTCAAGCTGCCAGGCCTCAAGCACGTGGATCAATCAACGCCACGTGCGGCGCTGAAGGTCTaGAGGCTCAGCACACAGGGT | + |
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Preference number: 4 (lower is better) Translates to: SFLVKLPGLKHVDQSTPRAALKV*RLSTQG Trigger: ACCCTGTGTGCTGAGCCTCCAGACCTTCAGCGCCGC...ACGTGGCGTTGATTGATCCACGTGCTTGAGGCCTGGCAGCTTGACCAAGAAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR CCA 90 bp | CTCCTCAGAATCACAGCCGAGGACCCCAGAAGGCAACAGCAACCATTTGGGGGCCAGTCGAACTCCAGCTaGGGTGACCCAGTAGATCTC | + |
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Preference number: 4 (lower is better) Translates to: LLRITAEDPRRQQQPFGGQSNSS*GDPVDL Trigger: GAGATCTACTGGGTCACCCCAGCTGGAGTTCGACTG...GCCCCCAAATGGTTGCTGTTGCCTTCTGGGGTCCTCGGCTGTGATTCTGAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR CCA 90 bp | ACCCCATCTTTCTTGGTCAAGCTGCCAGGCCTCAAGCACGTGGATCAATCAACGTCCTTTGTCCCTGCCTaGCTGGAAGGGAGCGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: TPSFLVKLPGLKHVDQSTSFVPA*LEGSVA Trigger: GGCCACGCTCCCTTCCAGCCAGGCAGGGACAAAGGA...CGTTGATTGATCCACGTGCTTGAGGCCTGGCAGCTTGACCAAGAAAGATGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR CCA 90 bp | TTGGACACTCTCCTCAGAATCACAGCCGAGGACCCCAGAAGGCAACAGCAACCAAAAGCAGGAGCTTCATaGTCCCGGAGGGAGGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: LDTLLRITAEDPRRQQQPKAGAS*SRREEA Trigger: CGCCTCCTCCCTCCGGGACCATGAAGCTCCTGCTTT...TGGTTGCTGTTGCCTTCTGGGGTCCTCGGCTGTGATTCTGAGGAGAGTGTCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR TCA 90 bp | GGCAGGCTCCCAAGACAGGTAGGAGAAGCCTCTTTCAGCCCTTGCCCAGGAGGGTTAGTCCTAGTTCCTTaGGGTGCAGCATGTTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: GRLPRQVGEASFSPCPGGLVLVP*GAACWQ Trigger: TTGCCAACATGCTGCACCTCAAGGAACTAGGACTAA...CCCTCCTGGGCAAGGGCTGAAAGAGGCTTCTCCTACCTGTCTTGGGAGCCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR TCA 90 bp | TCTTTCTTGGTCAAGCTGCCAGGCCTCAAGCACGTGGATCAATCAACGCCACGTAACTTCGGGGAGAGATaGGGGGCAGGCAGTGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: SFLVKLPGLKHVDQSTPRNFGER*GAGSGL Trigger: CAGACCACTGCCTGCCCCTCATCTCTCCCCGAAGTT...ACGTGGCGTTGATTGATCCACGTGCTTGAGGCCTGGCAGCTTGACCAAGAAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR GCA 90 bp | AGGAGCTGCCGAACCCCATCTTTCTTGGTCAAGCTGCCAGGCCTCAAGCACGTGCTGATGCTGTTACTCTaGAGGAGCAGGGTCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RSCRTPSFLVKLPGLKHVLMLLL*RSRVCV Trigger: GACACAGACCCTGCTCCTGCAGAGTAACAGCATCAG...CACGTGCTTGAGGCCTGGCAGCTTGACCAAGAAAGATGGGGTTCGGCAGCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR GCA 90 bp | CTCCTCAGAATCACAGCCGAGGACCCCAGAAGGCAACAGCAACCATTTGGGGGCTTCTGGTTCAGCCAGTaGCCGACAGTGAAGTACCGT | + |
|
Preference number: 4 (lower is better) Translates to: LLRITAEDPRRQQQPFGGFWFSQ*PTVKYR Trigger: ACGGTACTTCACTGTCGGGCACTGGCTGAACCAGAA...GCCCCCAAATGGTTGCTGTTGCCTTCTGGGGTCCTCGGCTGTGATTCTGAGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR GCA 90 bp | TTTTGGGGCAGGCTCCCAAGACAGGTAGGAGAAGCCTCTTTCAGCCCTTGCCCATCAGCAAAGGCCACTTaGAGGCAGGCCCAGTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: FWGRLPRQVGEASFSPCPSAKAT*RQAQYS Trigger: AGAGTACTGGGCCTGCCTGCAAGTGGCCTTTGCTGA...TGGGCAAGGGCTGAAAGAGGCTTCTCCTACCTGTCTTGGGAGCCTGCCCCAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR CCA 90 bp | TCTTTCTTGGTCAAGCTGCCAGGCCTCAAGCACGTGGATCAATCAACGCCACGTAGAGCTCCTGCAGGCTaGTCAGCCCAGCGAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SFLVKLPGLKHVDQSTPRRAPAG*SAQRSC Trigger: ACAGCTTCGCTGGGCTGACCAGCCTGCAGGAGCTCT...ACGTGGCGTTGATTGATCCACGTGCTTGAGGCCTGGCAGCTTGACCAAGAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR CCA 90 bp | AGGAGCTGCCGAACCCCATCTTTCTTGGTCAAGCTGCCAGGCCTCAAGCACGTGATGTTGAGACAATGGTaGTGGCACCCTCTCCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: RSCRTPSFLVKLPGLKHVMLRQW*WHPLPI Trigger: GATGGGGAGAGGGTGCCACCACCATTGTCTCAACAT...CACGTGCTTGAGGCCTGGCAGCTTGACCAAGAAAGATGGGGTTCGGCAGCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR TCA 90 bp | TTTTGGGGCAGGCTCCCAAGACAGGTAGGAGAAGCCTCTTTCAGCCCTTGCCCAAGAGCTGGTTATGGTTaGGATAGAGCTCCTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FWGRLPRQVGEASFSPCPRAGYG*DRAPAG Trigger: GCCTGCAGGAGCTCTATCTCAACCATAACCAGCTCT...TGGGCAAGGGCTGAAAGAGGCTTCTCCTACCTGTCTTGGGAGCCTGCCCCAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR GCA 90 bp | AGGAGCTGCCGAACCCCATCTTTCTTGGTCAAGCTGCCAGGCCTCAAGCACGTGTCAGGAAGAGGTCATTaGAGTCGACAGTGGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RSCRTPSFLVKLPGLKHVSGRGH*SRQWWL Trigger: AAGCCACCACTGTCGACTGCAATGACCTCTTCCTGA...CACGTGCTTGAGGCCTGGCAGCTTGACCAAGAAAGATGGGGTTCGGCAGCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR GCA 90 bp | TTTTGGGGCAGGCTCCCAAGACAGGTAGGAGAAGCCTCTTTCAGCCCTTGCCCAAGAGACTCCACTGTCTaGTGGTGCAAGGCACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FWGRLPRQVGEASFSPCPRDSTV*WCKALR Trigger: TCTCAGTGCCTTGCACCAGCAGACAGTGGAGTCTCT...TGGGCAAGGGCTGAAAGAGGCTTCTCCTACCTGTCTTGGGAGCCTGCCCCAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR GCA 90 bp | AGCCTCTTTCAGCCCTTGCCCAGGAGGGGGAGGAGCAAGCAACTGAGACTGTACTCTCCACTGGCTATCTaGAGACTGGAGGGGAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SLFQPLPRRGRSKQLRLYSPLAI*RLEGKL Trigger: AAGTTTCCCCTCCAGTCTGCAGATAGCCAGTGGAGA...GTACAGTCTCAGTTGCTTGCTCCTCCCCCTCCTGGGCAAGGGCTGAAAGAGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR CCA 90 bp | TCTTTCTTGGTCAAGCTGCCAGGCCTCAAGCACGTGGATCAATCAACGCCACGTTGCAGTCGACAGTGGTaGCTTCACGGTAGGACGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFLVKLPGLKHVDQSTPRCSRQW*LHGRTS Trigger: GCTCGTCCTACCGTGAAGCCACCACTGTCGACTGCA...ACGTGGCGTTGATTGATCCACGTGCTTGAGGCCTGGCAGCTTGACCAAGAAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR CCA 90 bp | CTCCTCAGAATCACAGCCGAGGACCCCAGAAGGCAACAGCAACCATTTGGGGGCCAAACACAAGCCAACTaGGTGTGGGCATCAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLRITAEDPRRQQQPFGGQTQAN*VWASAK Trigger: CTTTGCTGATGCCCACACCCAGTTGGCTTGTGTTTG...GCCCCCAAATGGTTGCTGTTGCCTTCTGGGGTCCTCGGCTGTGATTCTGAGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR TCA 90 bp | CCTGTTCCTTGGACACTCTCCTCAGAATCACAGCCGAGGACCCCAGAAGGCAACTGTTGCCGCCAATCATaGGGATTTCCAAGTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PVPWTLSSESQPRTPEGNCCRQS*GFPSWA Trigger: TGCCCAACTTGGAAATCCTCATGATTGGCGGCAACA...GTTGCCTTCTGGGGTCCTCGGCTGTGATTCTGAGGAGAGTGTCCAAGGAACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR CCA 90 bp | CTTTCAGCCCTTGCCCAGGAGGGGGAGGAGCAAGCAACTGAGACTGTACAAAGAACACAGGGTGGACTGTaGTTCGATGAAACGGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSALAQEGEEQATETVQRTQGGL*FDETDV Trigger: CACGTCCGTTTCATCGAACCACAGTCCACCCTGTGT...TCTTTGTACAGTCTCAGTTGCTTGCTCCTCCCCCTCCTGGGCAAGGGCTGAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR CCA 90 bp | GGACACTCTCCTCAGAATCACAGCCGAGGACCCCAGAAGGCAACAGCAACCATTGTAGATCTCAGGTTCTaGTTCAGCCAGTGCCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: GHSPQNHSRGPQKATATIVDLRF*FSQCPT Trigger: TGTCGGGCACTGGCTGAACCAGAACCTGAGATCTAC...AATGGTTGCTGTTGCCTTCTGGGGTCCTCGGCTGTGATTCTGAGGAGAGTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR CCA 90 bp | GGACACTCTCCTCAGAATCACAGCCGAGGACCCCAGAAGGCAACAGCAACCATTGGAGACTATATTGGGTaGGGGTGCCCAAAACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GHSPQNHSRGPQKATATIGDYIG*GCPKQQ Trigger: CTGCTGTTTTGGGCACCCCCACCCAATATAGTCTCC...AATGGTTGCTGTTGCCTTCTGGGGTCCTCGGCTGTGATTCTGAGGAGAGTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR CCA 90 bp | GGACACTCTCCTCAGAATCACAGCCGAGGACCCCAGAAGGCAACAGCAACCATTGAGCAAACTTGTCGATaGAGACCAGTTCCTCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: GHSPQNHSRGPQKATATIEQTCR*RPVPPC Trigger: ACATGGAGGAACTGGTCTCCATCGACAAGTTTGCTC...AATGGTTGCTGTTGCCTTCTGGGGTCCTCGGCTGTGATTCTGAGGAGAGTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR CCA 90 bp | TTTTGGGGCAGGCTCCCAAGACAGGTAGGAGAAGCCTCTTTCAGCCCTTGCCCAGATGAAAGAAAGCCGTaGGTTGTTGGTGATGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FWGRLPRQVGEASFSPCPDERKP*VVGDVQ Trigger: TTGGACATCACCAACAACCCACGGCTTTCTTTCATC...TGGGCAAGGGCTGAAAGAGGCTTCTCCTACCTGTCTTGGGAGCCTGCCCCAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR TCA 90 bp | ACCCCATCTTTCTTGGTCAAGCTGCCAGGCCTCAAGCACGTGGATCAATCAACGTTATTTCTCTACTGCTaGGACCTGGCGGAACTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TPSFLVKLPGLKHVDQSTLFLYC*DLAELQ Trigger: CTGAAGTTCCGCCAGGTCTCAGCAGTAGAGAAATAA...CGTTGATTGATCCACGTGCTTGAGGCCTGGCAGCTTGACCAAGAAAGATGGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| 3UTR CAA 72 bp | GGGACAGGTGACACATTTCTCCACAAAGATACAAAATaGCCTATAGAAAGTCAACTTCAGAGCCCAGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: GTGDTFLHKDTK*PIESQLQSPGY Trigger: ATAGCCTGGGCTCTGAAGTTGACTTTCTATAGGCAATTTTGTATCTTTGTGGAGAAATGTGTCACCTGTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS CCA 90 bp | GAGGAGGGCAGGGCACACGCCAGGGTACCACCGGTGCTGCAGCGGTaGTACCAGCCACCCAAGATAGCAAGAGGGCAGCCACGAGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: EEGRAHARVPPVLQR*YQPPKIARGQPRGA Trigger: GGCTCCTCGTGGCTGCCCTCTTGCTATCTTGGGTGGCTGGTACCACCGCTGCAGCACCGGTGGTACCCTGGCGTGTGCCCTGCCCTCCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS CCA 90 bp | GGGCAGGCAGTGGTCTGTCATCTCCCGGAAGGGCACCTCCCGGACTaGGCGGCGCTGAAGGTCTGGAGGCTCAGCACACAGGGTGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: GQAVVCHLPEGHLPD*AALKVWRLSTQGGL Trigger: CAGTCCACCCTGTGTGCTGAGCCTCCAGACCTTCAGCGCCGCCCAGTCCGGGAGGTGCCCTTCCGGGAGATGACAGACCACTGCCTGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS CCA 90 bp | TGGGCGGCGCTGAAGGTCTGGAGGCTCAGCACACAGGGTGGACTGTaGTTCGATGAAACGGACGTGGGTGCCCGTGGCGTTGGCCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: WAALKVWRLSTQGGL*FDETDVGARGVGPA Trigger: CGCTGGGCCAACGCCACGGGCACCCACGTCCGTTTCATCGAACCACAGTCCACCCTGTGTGCTGAGCCTCCAGACCTTCAGCGCCGCCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR CAA 90 bp | GCCGAGGACCCCAGAAGGCAACAGCAACCATTTGGGGGCTGTGAGGGCATCCCCTGGGTGCCCGTGGCGTaGGCCCAGCGGATGACACAG | + |
|
Preference number: 5 (lower is better) Translates to: AEDPRRQQQPFGGCEGIPWVPVA*AQRMTQ Trigger: CTGTGTCATCCGCTGGGCCAACGCCACGGGCACCCA...GGGGATGCCCTCACAGCCCCCAAATGGTTGCTGTTGCCTTCTGGGGTCCTCGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS GCA 90 bp | CAGAAAGCCCAGACCGGAAGAAGAGGCTTCTCACCCACCACCCCCTaGTTGGACTGGCCTCTGCCGAGGTGGGCTGCAAGCCCAGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QKAQTGRRGFSPTTP*LDWPLPRWAASPAA Trigger: GGCAGCTGGGCTTGCAGCCCACCTCGGCAGAGGCCAGTCCAAGCAGGGGGTGGTGGGTGAGAAGCCTCTTCTTCCGGTCTGGGCTTTCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS CCA 90 bp | CATCTCCCGGAAGGGCACCTCCCGGACTGGGCGGCGCTGAAGGTCTaGAGGCTCAGCACACAGGGTGGACTGTGGTTCGATGAAACGGAC | + |
|
Preference number: 5 (lower is better) Translates to: HLPEGHLPDWAALKV*RLSTQGGLWFDETD Trigger: GTCCGTTTCATCGAACCACAGTCCACCCTGTGTGCTGAGCCTCCAGACCTTCAGCGCCGCCCAGTCCGGGAGGTGCCCTTCCGGGAGATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS TCA 90 bp | CCGGTCCGACCCGCTGCAGTGGGTTTTTGTTCAGGTCTAGGAACTTaGGCCCAGGCACCTGCTCCAATGCCCGCTTGGGCACCTGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PVRPAAVGFCSGLGT*AQAPAPMPAWAPGP Trigger: TGGCCCAGGTGCCCAAGCGGGCATTGGAGCAGGTGCCTGGGCTCAAGTTCCTAGACCTGAACAAAAACCCACTGCAGCGGGTCGGACCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR CAA 90 bp | CTCCTCAGAATCACAGCCGAGGACCCCAGAAGGCAACAGCAACCATTTGGGGGCTCACAGCGGATGGGGTaGCCGTGGAGCCCCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLRITAEDPRRQQQPFGGSQRMG*PWSPTS Trigger: GGAGGTGGGGCTCCACGGCAACCCCATCCGCTGTGA...GCCCCCAAATGGTTGCTGTTGCCTTCTGGGGTCCTCGGCTGTGATTCTGAGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS CCA 90 bp | GCTGTTACTCTGCAGGAGCAGGGTCTGTGTCCCCGCAGGGAGCCTTaGGGGCACTGCCGTCAGGAAGAGGTCATTGCAGTCGACAGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: AVTLQEQGLCPRREP*GHCRQEEVIAVDSG Trigger: ACCACTGTCGACTGCAATGACCTCTTCCTGACGGCAGTGCCCCCAAGGCTCCCTGCGGGGACACAGACCCTGCTCCTGCAGAGTAACAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS GCA 90 bp | CGTAGTCTGAGATCTCCCGCAAGCTCATGCCTGCCAGCACCAGGCTaGGCAGGTTGGCCAGGGGCCGGAAGTTCATGTCCAAGATGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: RSLRSPASSCLPAPG*AGWPGAGSSCPRWH Trigger: ATGCCATCTTGGACATGAACTTCCGGCCCCTGGCCAACCTGCGCAGCCTGGTGCTGGCAGGCATGAGCTTGCGGGAGATCTCAGACTACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR CAA 90 bp | GGCAGGCTCCCAAGACAGGTAGGAGAAGCCTCTTTCAGCCCTTGCCCAGGAGGGTTGAGGTGCAGCATGTaGGCAAAGTCTCCCGGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: GRLPRQVGEASFSPCPGGLRCSM*AKSPGP Trigger: CGGACCGGGAGACTTTGCCAACATGCTGCACCTCAA...CCCTCCTGGGCAAGGGCTGAAAGAGGCTTCTCCTACCTGTCTTGGGAGCCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS TCA 90 bp | GAAAGAGAGACTCTCCAGGCTTTGCAGTCCCTCCAGAGCGTAGTCTaGGATCTCCCGCAAGCTCATGCCTGCCAGCACCAGGCTGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ERETLQALQSLQSVV*DLPQAHACQHQAAQ Trigger: CTGCGCAGCCTGGTGCTGGCAGGCATGAGCTTGCGGGAGATCTCAGACTACGCTCTGGAGGGACTGCAAAGCCTGGAGAGTCTCTCTTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR CAA 90 bp | TTTTGGGGCAGGCTCCCAAGACAGGTAGGAGAAGCCTCTTTCAGCCCTTGCCCACAGCTGAGGCAGGGCTaGGAAATCGCAGTCTCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: FWGRLPRQVGEASFSPCPQLRQG*EIAVSG Trigger: GCCCGAGACTGCGATTTCCAAGCCCTGCCTCAGCTG...TGGGCAAGGGCTGAAAGAGGCTTCTCCTACCTGTCTTGGGAGCCTGCCCCAAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR CAA 90 bp | GCTGCCAGGCCTCAAGCACGTGGATCAATCAACGCCACGTTCCTGGCAGGCATCTTCAGTCCTGGTCCTTaGTCCCTGCCTGGCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AARPQARGSINATFLAGIFSPGP*SLPGWK Trigger: CTTCCAGCCAGGCAGGGACAAAGGACCAGGACTGAA...GATGCCTGCCAGGAACGTGGCGTTGATTGATCCACGTGCTTGAGGCCTGGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR CAA 90 bp | GCCGAGGACCCCAGAAGGCAACAGCAACCATTTGGGGGCTGTGAGGGCATCCCCTTGGTGGAGACTATATaGGGTGGGGGTGCCCAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: AEDPRRQQQPFGGCEGIPLVETI*GGGAQN Trigger: GTTTTGGGCACCCCCACCCAATATAGTCTCCACCAA...GGGGATGCCCTCACAGCCCCCAAATGGTTGCTGTTGCCTTCTGGGGTCCTCGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS CCA 90 bp | TGGCAAGGAGAGGCCTCTTTAGTCCTGGCCCAAACACAAGCCAACTaGGTGTGGGCATCAGCAAAGGCCACTTGCAGGCAGGCCCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: WQGEASLVLAQTQAN*VWASAKATCRQAQY Trigger: GTACTGGGCCTGCCTGCAAGTGGCCTTTGCTGATGCCCACACCCAGTTGGCTTGTGTTTGGGCCAGGACTAAAGAGGCCTCTCCTTGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR CAA 90 bp | GCCGAGGACCCCAGAAGGCAACAGCAACCATTTGGGGGCTGTGAGGGCATCCCCGGAACTTCAGCAATGTaGAGACAATGGTGGTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: AEDPRRQQQPFGGCEGIPGTSAM*RQWWWH Trigger: GTGCCACCACCATTGTCTCAACATTGCTGAAGTTCC...GGGGATGCCCTCACAGCCCCCAAATGGTTGCTGTTGCCTTCTGGGGTCCTCGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS TCA 90 bp | TCCAGCCGGTTCAGCCGGTTCTCTTCTAGATGTAGGCTCAGCAGCTaGGGCAGGGCTTGGAAATCGCAGTCTCGGGCATCTGAGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSRFSRFSSRCRLSS*GRAWKSQSRASEKL Trigger: CAGCTTCTCAGATGCCCGAGACTGCGATTTCCAAGCCCTGCCTCAGCTGCTGAGCCTACATCTAGAAGAGAACCGGCTGAACCGGCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS GCA 90 bp | TCCTTGAGGTGCAGCATGTTGGCAAAGTCTCCCGGTCCGACCCGCTaGAGTGGGTTTTTGTTCAGGTCTAGGAACTTGAGCCCAGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: SLRCSMLAKSPGPTR*SGFLFRSRNLSPGT Trigger: GGTGCCTGGGCTCAAGTTCCTAGACCTGAACAAAAACCCACTGCAGCGGGTCGGACCGGGAGACTTTGCCAACATGCTGCACCTCAAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS CCA 90 bp | AGCTTCAGTCCTGGTCCTTTGTCCCTGCCTGGCTGGAAGGGAGCGTaGCCAACCACAACACTGACGGTTTTAGTGTCAGCCCCTACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SFSPGPLSLPGWKGA*PTTTLTVLVSAPTK Trigger: CTTGGTAGGGGCTGACACTAAAACCGTCAGTGTTGTGGTTGGCCACGCTCCCTTCCAGCCAGGCAGGGACAAAGGACCAGGACTGAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR CAA 90 bp | GGCAGGCTCCCAAGACAGGTAGGAGAAGCCTCTTTCAGCCCTTGCCCAGGAGGGATGGTCCTAAGCAGGTaGGAATTGAGGTGCAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GRLPRQVGEASFSPCPGGMVLSR*ELRCSL Trigger: GAGACTGCACCTCAATTCCAACCTGCTTAGGACCAT...CCCTCCTGGGCAAGGGCTGAAAGAGGCTTCTCCTACCTGTCTTGGGAGCCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS TCA 90 bp | ACTTCAGCAATGTTGAGACAATGGTGGTGGCACCCTCTCCCCATCTaGCATCTGGGCTGCTTCCTCCCTGGATTCCAGGGCAGGACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TSAMLRQWWWHPLPI*HLGCFLPGFQGRTR Trigger: CCTTGTCCTGCCCTGGAATCCAGGGAGGAAGCAGCCCAGATGTCAGATGGGGAGAGGGTGCCACCACCATTGTCTCAACATTGCTGAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS CCA 90 bp | TCCTGCACATGGAGCTTCAGTCCTGGTCCTTTGTCCCTGCCTGGCTaGAAGGGAGCGTGGCCAACCACAACACTGACGGTTTTAGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SCTWSFSPGPLSLPG*KGAWPTTTLTVLVS Trigger: TGACACTAAAACCGTCAGTGTTGTGGTTGGCCACGCTCCCTTCCAGCCAGGCAGGGACAAAGGACCAGGACTGAAGCTCCATGTGCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS CCA 90 bp | TGTCTCCTGCACATGGAGCTTCAGTCCTGGTCCTTTGTCCCTGCCTaGCTGGAAGGGAGCGTGGCCAACCACAACACTGACGGTTTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: CLLHMELQSWSFVPA*LEGSVANHNTDGFS Trigger: ACTAAAACCGTCAGTGTTGTGGTTGGCCACGCTCCCTTCCAGCCAGGCAGGGACAAAGGACCAGGACTGAAGCTCCATGTGCAGGAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS CCA 90 bp | GGAGGAGGCGCTAGACCAGGTGAGGTTGGTGGAGACTATATTGGGTaGGGGTGCCCAAAACAGCAGGATGTGATATGGGTGTGTCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GGGARPGEVGGDYIG*GCPKQQDVIWVCLL Trigger: CAGGAGACACACCCATATCACATCCTGCTGTTTTGGGCACCCCCACCCAATATAGTCTCCACCAACCTCACCTGGTCTAGCGCCTCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR CAA 90 bp | ACCCCATCTTTCTTGGTCAAGCTGCCAGGCCTCAAGCACGTGGATCAATCAACGCCCACCTCCTGTAGGTaGGGCAGAGACTCCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: TPSFLVKLPGLKHVDQSTPTSCR*GRDSTV Trigger: GACAGTGGAGTCTCTGCCCAACCTACAGGAGGTGGG...CGTTGATTGATCCACGTGCTTGAGGCCTGGCAGCTTGACCAAGAAAGATGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS GCA 90 bp | ATGGAGACCAGTTCCTCCATGTTGTTTAGTCCTAGTTCCTTGAGGTaGAGCATGTTGGCAAAGTCTCCCGGTCCGACCCGCTGCAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: METSSSMLFSPSSLR*SMLAKSPGPTRCSG Trigger: CCCACTGCAGCGGGTCGGACCGGGAGACTTTGCCAACATGCTGCACCTCAAGGAACTAGGACTAAACAACATGGAGGAACTGGTCTCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS GCA 90 bp | GGCGCTAGACCAGGTGAGGTTGGTGGAGACTATATTGGGTGGGGGTaGCCAAAACAGCAGGATGTGATATGGGTGTGTCTCCTGCACATG | + |
|
Preference number: 5 (lower is better) Translates to: GARPGEVGGDYIGWG*PKQQDVIWVCLLHM Trigger: CATGTGCAGGAGACACACCCATATCACATCCTGCTGTTTTGGGCACCCCCACCCAATATAGTCTCCACCAACCTCACCTGGTCTAGCGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR CAA 90 bp | TTGGGGCAGGCTCCCAAGACAGGTAGGAGAAGCCTCTTTCAGCCCTTGCCCAGGTTTAGTCCTAGTTCCTaGAGGTGCAGCATGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LGQAPKTGRRSLFQPLPRFSPSS*RCSMLA Trigger: TGCCAACATGCTGCACCTCAAGGAACTAGGACTAAA...CCTGGGCAAGGGCTGAAAGAGGCTTCTCCTACCTGTCTTGGGAGCCTGCCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR CAA 90 bp | AGCCTCTTTCAGCCCTTGCCCAGGAGGGGGAGGAGCAAGCAACTGAGACTGTACCTAGACCAGGTGAGGTaGGTGGAGACTATATTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SLFQPLPRRGRSKQLRLYLDQVR*VETILG Trigger: ACCCAATATAGTCTCCACCAACCTCACCTGGTCTAG...GTACAGTCTCAGTTGCTTGCTCCTCCCCCTCCTGGGCAAGGGCTGAAAGAGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS TCA 90 bp | TGTCGATGGAGACCAGTTCCTCCATGTTGTTTAGTCCTAGTTCCTTaGGGTGCAGCATGTTGGCAAAGTCTCCCGGTCCGACCCGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: CRWRPVPPCCLVLVP*GAACWQSLPVRPAA Trigger: TGCAGCGGGTCGGACCGGGAGACTTTGCCAACATGCTGCACCTCAAGGAACTAGGACTAAACAACATGGAGGAACTGGTCTCCATCGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS CCA 90 bp | CTGGGGCAGGTGGTGAAAGGCGCGAGGATGGATGAAAGAAAGCCGTaGGTTGTTGGTGATGTCCAACTTGGTCAGCTCAGGGAGATTTAC | + |
|
Preference number: 5 (lower is better) Translates to: LGQVVKGARMDERKP*VVGDVQLGQLREIY Trigger: GTAAATCTCCCTGAGCTGACCAAGTTGGACATCACCAACAACCCACGGCTTTCTTTCATCCATCCTCGCGCCTTTCACCACCTGCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR CAA 90 bp | ACCCCATCTTTCTTGGTCAAGCTGCCAGGCCTCAAGCACGTGGATCAATCAACGGTCAGGAAGAGGTCATaGCAGTCGACAGTGGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TPSFLVKLPGLKHVDQSTVRKRS*QSTVVA Trigger: AGCCACCACTGTCGACTGCAATGACCTCTTCCTGAC...CGTTGATTGATCCACGTGCTTGAGGCCTGGCAGCTTGACCAAGAAAGATGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR CAA 90 bp | TTGGACACTCTCCTCAGAATCACAGCCGAGGACCCCAGAAGGCAACAGCAACCAAAGATGGCATCCACCTaGTTGCCGCCAATCATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LDTLLRITAEDPRRQQQPKMAST*LPPIMR Trigger: CCTCATGATTGGCGGCAACAAGGTGGATGCCATCTT...TGGTTGCTGTTGCCTTCTGGGGTCCTCGGCTGTGATTCTGAGGAGAGTGTCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR CAA 90 bp | CTCCTCAGAATCACAGCCGAGGACCCCAGAAGGCAACAGCAACCATTTGGGGGCAAAGAAAGCCGTGGGTaGTTGGTGATGTCCAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLRITAEDPRRQQQPFGGKESRG*LVMSNL Trigger: CAAGTTGGACATCACCAACAACCCACGGCTTTCTTT...GCCCCCAAATGGTTGCTGTTGCCTTCTGGGGTCCTCGGCTGTGATTCTGAGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS TCA 90 bp | GGAAGTTCATGTCCAAGATGGCATCCACCTTGTTGCCGCCAATCATaGGGATTTCCAAGTTGGGCAGCATCTCGAACCAGCGGCTGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: GSSCPRWHPPCCRQS*GFPSWAASRTSGCR Trigger: TCGACAGCCGCTGGTTCGAGATGCTGCCCAACTTGGAAATCCTCATGATTGGCGGCAACAAGGTGGATGCCATCTTGGACATGAACTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS TCA 90 bp | AGAGCATTGTTGTTGAGCATGAGAGTCTCCATCTGGGGCAGGTGGTaGAAGGCGCGAGGATGGATGAAAGAAAGCCGTGGGTTGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RALLLSMRVSIWGRW*KARGWMKESRGLLV Trigger: CACCAACAACCCACGGCTTTCTTTCATCCATCCTCGCGCCTTTCACCACCTGCCCCAGATGGAGACTCTCATGCTCAACAACAATGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS TCA 90 bp | TTGGTGGAGACTATATTGGGTGGGGGTGCCCAAAACAGCAGGATGTaGTATGGGTGTGTCTCCTGCACATGGAGCTTCAGTCCTGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LVETILGGGAQNSRM*YGCVSCTWSFSPGP Trigger: AGGACCAGGACTGAAGCTCCATGTGCAGGAGACACACCCATATCACATCCTGCTGTTTTGGGCACCCCCACCCAATATAGTCTCCACCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS CCA 90 bp | GGAGACTATATTGGGTGGGGGTGCCCAAAACAGCAGGATGTGATATaGGTGTGTCTCCTGCACATGGAGCTTCAGTCCTGGTCCTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GDYIGWGCPKQQDVI*VCLLHMELQSWSFV Trigger: GACAAAGGACCAGGACTGAAGCTCCATGTGCAGGAGACACACCCATATCACATCCTGCTGTTTTGGGCACCCCCACCCAATATAGTCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR CAA 90 bp | TTGGACACTCTCCTCAGAATCACAGCCGAGGACCCCAGAAGGCAACAGCAACCACGCTGCAGTGGGTTTTaGTTCAGGTCTAGGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LDTLLRITAEDPRRQQQPRCSGF*FRSRNL Trigger: CAAGTTCCTAGACCTGAACAAAAACCCACTGCAGCG...TGGTTGCTGTTGCCTTCTGGGGTCCTCGGCTGTGATTCTGAGGAGAGTGTCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR CAA 90 bp | TTTTGGGGCAGGCTCCCAAGACAGGTAGGAGAAGCCTCTTTCAGCCCTTGCCCATTTACCAGAGCAAACTaGTCGATGGAGACCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FWGRLPRQVGEASFSPCPFTRAN*SMETSS Trigger: GGAACTGGTCTCCATCGACAAGTTTGCTCTGGTAAA...TGGGCAAGGGCTGAAAGAGGCTTCTCCTACCTGTCTTGGGAGCCTGCCCCAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS-3UTR CAA 90 bp | GGACACTCTCCTCAGAATCACAGCCGAGGACCCCAGAAGGCAACAGCAACCATTCTGAGAGCATTGTTGTaGAGCATGAGAGTCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: GHSPQNHSRGPQKATATILRALL*SMRVSI Trigger: GATGGAGACTCTCATGCTCAACAACAATGCTCTCAG...AATGGTTGCTGTTGCCTTCTGGGGTCCTCGGCTGTGATTCTGAGGAGAGTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS-3UTR CAA 90 bp | ACCCCATCTTTCTTGGTCAAGCTGCCAGGCCTCAAGCACGTGGATCAATCAACGTTGGTGATGTCCAACTaGGTCAGCTCAGGGAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: TPSFLVKLPGLKHVDQSTLVMSN*VSSGRF Trigger: AAATCTCCCTGAGCTGACCAAGTTGGACATCACCAA...CGTTGATTGATCCACGTGCTTGAGGCCTGGCAGCTTGACCAAGAAAGATGGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS TCA 72 bp | CGGGGTGTGTACCAGGGCCGGATCTGGCAGGCACACTaGGGAGGGCAGGGCACACGCCAGGGTACCACCGGT | + |
|
Preference number: 6 (lower is better) Translates to: RGVYQGRIWQAH*GGQGTRQGTTG Trigger: ACCGGTGGTACCCTGGCGTGTGCCCTGCCCTCCTCAGTGTGCCTGCCAGATCCGGCCCTGGTACACACCCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS CCA 72 bp | GTGCCCCGCGGCAGTCGGGCCAAAGCAGGAGCTTCATaGTCCCGGAGGGAGGAGGCGCTAGACCAGGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: VPRGSRAKAGAS*SRREEALDQVR Trigger: CCTCACCTGGTCTAGCGCCTCCTCCCTCCGGGACCATGAAGCTCCTGCTTTGGCCCGACTGCCGCGGGGCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS TCA 72 bp | AACGGACGTGGGTGCCCGTGGCGTTGGCCCAGCGGATaGCACAGTCACAGCGGATGGGGTTGCCGTGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: NGRGCPWRWPSG*HSHSGWGCRGA Trigger: GGCTCCACGGCAACCCCATCCGCTGTGACTGTGTCATCCGCTGGGCCAACGCCACGGGCACCCACGTCCGTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS CCA 72 bp | GTGGTCTGTCATCTCCCGGAAGGGCACCTCCCGGACTaGGCGGCGCTGAAGGTCTGGAGGCTCAGCACACAG | + |
|
Preference number: 6 (lower is better) Translates to: VVCHLPEGHLPD*AALKVWRLSTQ Trigger: CTGTGTGCTGAGCCTCCAGACCTTCAGCGCCGCCCAGTCCGGGAGGTGCCCTTCCGGGAGATGACAGACCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS CCA 72 bp | CCGGAAGAAGAGGCTTCTCACCCACCACCCCCTGCTTaGACTGGCCTCTGCCGAGGTGGGCTGCAAGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PEEEASHPPPPA*TGLCRGGLQAQ Trigger: CTGGGCTTGCAGCCCACCTCGGCAGAGGCCAGTCCAAGCAGGGGGTGGTGGGTGAGAAGCCTCTTCTTCCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS TCA 72 bp | CTGGAGGCTCAGCACACAGGGTGGACTGTGGTTCGATaGAACGGACGTGGGTGCCCGTGGCGTTGGCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LEAQHTGWTVVR*NGRGCPWRWPS Trigger: GCTGGGCCAACGCCACGGGCACCCACGTCCGTTTCATCGAACCACAGTCCACCCTGTGTGCTGAGCCTCCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS GCA 72 bp | CCTCCAGAGCGTAGTCTGAGATCTCCCGCAAGCTCATaGCTGCCAGCACCAGGCTGCGCAGGTTGGCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PPERSLRSPASS*LPAPGCAGWPG Trigger: CCCTGGCCAACCTGCGCAGCCTGGTGCTGGCAGGCATGAGCTTGCGGGAGATCTCAGACTACGCTCTGGAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS GCA 72 bp | CAGACCGGAAGAAGAGGCTTCTCACCCACCACCCCCTaGTTGGACTGGCCTCTGCCGAGGTGGGCTGCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: QTGRRGFSPTTP*LDWPLPRWAAS Trigger: GCTTGCAGCCCACCTCGGCAGAGGCCAGTCCAAGCAGGGGGTGGTGGGTGAGAAGCCTCTTCTTCCGGTCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS CCA 72 bp | CTGCAGGAGCAGGGTCTGTGTCCCCGCAGGGAGCCTTaGGGGCACTGCCGTCAGGAAGAGGTCATTGCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LQEQGLCPRREP*GHCRQEEVIAV Trigger: GACTGCAATGACCTCTTCCTGACGGCAGTGCCCCCAAGGCTCCCTGCGGGGACACAGACCCTGCTCCTGCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS CCA 72 bp | GAAGGGCACCTCCCGGACTGGGCGGCGCTGAAGGTCTaGAGGCTCAGCACACAGGGTGGACTGTGGTTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: EGHLPDWAALKV*RLSTQGGLWFD Trigger: ATCGAACCACAGTCCACCCTGTGTGCTGAGCCTCCAGACCTTCAGCGCCGCCCAGTCCGGGAGGTGCCCTTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS CAA 90 bp | CCCGGTCCGACCCGCTGCAGTGGGTTTTTGTTCAGGTCTAGGAACTaGAGCCCAGGCACCTGCTCCAATGCCCGCTTGGGCACCTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PGPTRCSGFLFRSRN*SPGTCSNARLGTWA Trigger: GGCCCAGGTGCCCAAGCGGGCATTGGAGCAGGTGCCTGGGCTCAAGTTCCTAGACCTGAACAAAAACCCACTGCAGCGGGTCGGACCGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS GCA 72 bp | CAGGGTCTGTGTCCCCGCAGGGAGCCTTGGGGGCACTaGCGTCAGGAAGAGGTCATTGCAGTCGACAGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: QGLCPRREPWGH*RQEEVIAVDSG Trigger: ACCACTGTCGACTGCAATGACCTCTTCCTGACGGCAGTGCCCCCAAGGCTCCCTGCGGGGACACAGACCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS GCA 72 bp | AGATCTCCCGCAAGCTCATGCCTGCCAGCACCAGGCTaGGCAGGTTGGCCAGGGGCCGGAAGTTCATGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RSPASSCLPAPG*AGWPGAGSSCP Trigger: TGGACATGAACTTCCGGCCCCTGGCCAACCTGCGCAGCCTGGTGCTGGCAGGCATGAGCTTGCGGGAGATCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS CCA 72 bp | GCACACAGGGTGGACTGTGGTTCGATGAAACGGACGTaGGTGCCCGTGGCGTTGGCCCAGCGGATGACACAG | + |
|
Preference number: 6 (lower is better) Translates to: AHRVDCGSMKRT*VPVALAQRMTQ Trigger: CTGTGTCATCCGCTGGGCCAACGCCACGGGCACCCACGTCCGTTTCATCGAACCACAGTCCACCCTGTGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS CAA 90 bp | TGCTGTTACTCTGCAGGAGCAGGGTCTGTGTCCCCGCAGGGAGCCTaGGGGGCACTGCCGTCAGGAAGAGGTCATTGCAGTCGACAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: CCYSAGAGSVSPQGA*GALPSGRGHCSRQW Trigger: CCACTGTCGACTGCAATGACCTCTTCCTGACGGCAGTGCCCCCAAGGCTCCCTGCGGGGACACAGACCCTGCTCCTGCAGAGTAACAGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS CAA 90 bp | GGCCCAAACACAAGCCAACTGGGTGTGGGCATCAGCAAAGGCCACTaGCAGGCAGGCCCAGTACTCTGTGGCCGGAAGGAGGCGGGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: GPNTSQLGVGISKGH*QAGPVLCGRKEAGN Trigger: ATTACCCGCCTCCTTCCGGCCACAGAGTACTGGGCCTGCCTGCAAGTGGCCTTTGCTGATGCCCACACCCAGTTGGCTTGTGTTTGGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS GCA 72 bp | CCTGCACATGGAGCTTCAGTCCTGGTCCTTTGTCCCTaGCTGGCTGGAAGGGAGCGTGGCCAACCACAACAC | + |
|
Preference number: 6 (lower is better) Translates to: PAHGASVLVLCP*LAGRERGQPQH Trigger: GTGTTGTGGTTGGCCACGCTCCCTTCCAGCCAGGCAGGGACAAAGGACCAGGACTGAAGCTCCATGTGCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS TCA 72 bp | ACTCTCCAGGCTTTGCAGTCCCTCCAGAGCGTAGTCTaGGATCTCCCGCAAGCTCATGCCTGCCAGCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: TLQALQSLQSVV*DLPQAHACQHQ Trigger: CTGGTGCTGGCAGGCATGAGCTTGCGGGAGATCTCAGACTACGCTCTGGAGGGACTGCAAAGCCTGGAGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS TCA 72 bp | CCCGCTGCAGTGGGTTTTTGTTCAGGTCTAGGAACTTaGGCCCAGGCACCTGCTCCAATGCCCGCTTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PAAVGFCSGLGT*AQAPAPMPAWA Trigger: TGCCCAAGCGGGCATTGGAGCAGGTGCCTGGGCTCAAGTTCCTAGACCTGAACAAAAACCCACTGCAGCGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS GCA 72 bp | AGCTCAGTCTGGTCTATCCGGCTGATGCTGTTACTCTaGAGGAGCAGGGTCTGTGTCCCCGCAGGGAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SSVWSIRLMLLL*RSRVCVPAGSL Trigger: AAGGCTCCCTGCGGGGACACAGACCCTGCTCCTGCAGAGTAACAGCATCAGCCGGATAGACCAGACTGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS GCA 72 bp | ACTCTAGGGTACCCTCAGGGAACACTCGGTACCTCCTaGCTGAGCGAGCAGGTGTCAGTCGAACTCCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TLGYPQGTLGTS*LSEQVSVELQL Trigger: CAGCTGGAGTTCGACTGACACCTGCTCGCTCAGGCAGGAGGTACCGAGTGTTCCCTGAGGGTACCCTAGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS CCA 72 bp | CCAGTGCCCGACAGTGAAGTACCGTGCTCTCTCCACTaGCTATCTGCAGACTGGAGGGGAAACTTCGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PVPDSEVPCSLH*LSADWRGNFGE Trigger: CTCCCCGAAGTTTCCCCTCCAGTCTGCAGATAGCCAGTGGAGAGAGCACGGTACTTCACTGTCGGGCACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS CCA 72 bp | TGGAGCTTCAGTCCTGGTCCTTTGTCCCTGCCTGGCTaGAAGGGAGCGTGGCCAACCACAACACTGACGGTT | + |
|
Preference number: 6 (lower is better) Translates to: WSFSPGPLSLPG*KGAWPTTTLTV Trigger: AACCGTCAGTGTTGTGGTTGGCCACGCTCCCTTCCAGCCAGGCAGGGACAAAGGACCAGGACTGAAGCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS CCA 72 bp | CACATGGAGCTTCAGTCCTGGTCCTTTGTCCCTGCCTaGCTGGAAGGGAGCGTGGCCAACCACAACACTGAC | + |
|
Preference number: 6 (lower is better) Translates to: HMELQSWSFVPA*LEGSVANHNTD Trigger: GTCAGTGTTGTGGTTGGCCACGCTCCCTTCCAGCCAGGCAGGGACAAAGGACCAGGACTGAAGCTCCATGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS CCA 72 bp | GACAATGGTGGTGGCACCCTCTCCCCATCTGACATCTaGGCTGCTTCCTCCCTGGATTCCAGGGCAGGACAA | + |
|
Preference number: 6 (lower is better) Translates to: DNGGGTLSPSDI*AASSLDSRAGQ Trigger: TTGTCCTGCCCTGGAATCCAGGGAGGAAGCAGCCCAGATGTCAGATGGGGAGAGGGTGCCACCACCATTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS CAA 72 bp | ACCCGCTGCAGTGGGTTTTTGTTCAGGTCTAGGAACTaGAGCCCAGGCACCTGCTCCAATGCCCGCTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TRCSGFLFRSRN*SPGTCSNARLG Trigger: GCCCAAGCGGGCATTGGAGCAGGTGCCTGGGCTCAAGTTCCTAGACCTGAACAAAAACCCACTGCAGCGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS CAA 72 bp | GCAAAGTCTCCCGGTCCGACCCGCTGCAGTGGGTTTTaGTTCAGGTCTAGGAACTTGAGCCCAGGCACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AKSPGPTRCSGF*FRSRNLSPGTC Trigger: GCAGGTGCCTGGGCTCAAGTTCCTAGACCTGAACAAAAACCCACTGCAGCGGGTCGGACCGGGAGACTTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS CAA 90 bp | AGCATGTTGGCAAAGTCTCCCGGTCCGACCCGCTGCAGTGGGTTTTaGTTCAGGTCTAGGAACTTGAGCCCAGGCACCTGCTCCAATGCC | + |
|
Preference number: 6 (lower is better) Translates to: SMLAKSPGPTRCSGF*FRSRNLSPGTCSNA Trigger: GGCATTGGAGCAGGTGCCTGGGCTCAAGTTCCTAGACCTGAACAAAAACCCACTGCAGCGGGTCGGACCGGGAGACTTTGCCAACATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS TCA 72 bp | CTGAGGCAGGGCTTGGAAATCGCAGTCTCGGGCATCTaGGAAGCTGTTCTGGGACAGGTCCAGCTCTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LRQGLEIAVSGI*EAVLGQVQLCE Trigger: CTCACAGAGCTGGACCTGTCCCAGAACAGCTTCTCAGATGCCCGAGACTGCGATTTCCAAGCCCTGCCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS TCA 72 bp | ATGTTGAGACAATGGTGGTGGCACCCTCTCCCCATCTaGCATCTGGGCTGCTTCCTCCCTGGATTCCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: MLRQWWWHPLPI*HLGCFLPGFQG Trigger: GCCCTGGAATCCAGGGAGGAAGCAGCCCAGATGTCAGATGGGGAGAGGGTGCCACCACCATTGTCTCAACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS GCA 72 bp | CGGCTGTCGATGGTCCTAAGCAGGTTGGAATTGAGGTaGAGTCTCAGCAGGTTACCCAGCCCTGCAAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RLSMVLSRLELR*SLSRLPSPAKA Trigger: GGCCTTTGCAGGGCTGGGTAACCTGCTGAGACTGCACCTCAATTCCAACCTGCTTAGGACCATCGACAGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS GCA 72 bp | GTTCTGGTTCAGCCAGTGCCCGACAGTGAAGTACCGTaGTCTCTCCACTGGCTATCTGCAGACTGGAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: VLVQPVPDSEVP*SLHWLSADWRG Trigger: TCCCCTCCAGTCTGCAGATAGCCAGTGGAGAGAGCACGGTACTTCACTGTCGGGCACTGGCTGAACCAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS CAA 90 bp | TTGGGCAGCATCTCGAACCAGCGGCTGTCGATGGTCCTAAGCAGGTaGGAATTGAGGTGCAGTCTCAGCAGGTTACCCAGCCCTGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LGSISNQRLSMVLSR*ELRCSLSRLPSPAK Trigger: CTTTGCAGGGCTGGGTAACCTGCTGAGACTGCACCTCAATTCCAACCTGCTTAGGACCATCGACAGCCGCTGGTTCGAGATGCTGCCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS TCA 72 bp | TGGCCAAGTAGGCAAGCTCAGTCTGGTCTATCCGGCTaGTGCTGTTACTCTGCAGGAGCAGGGTCTGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: WPSRQAQSGLSG*CCYSAGAGSVS Trigger: GGACACAGACCCTGCTCCTGCAGAGTAACAGCATCAGCCGGATAGACCAGACTGAGCTTGCCTACTTGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
||
| CDS CAA 90 bp | AGGTTGGCCAGGGGCCGGAAGTTCATGTCCAAGATGGCATCCACCTaGTTGCCGCCAATCATGAGGATTTCCAAGTTGGGCAGCATCTCG | + |
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Preference number: 6 (lower is better) Translates to: RLARGRKFMSKMAST*LPPIMRISKLGSIS Trigger: CGAGATGCTGCCCAACTTGGAAATCCTCATGATTGGCGGCAACAAGGTGGATGCCATCTTGGACATGAACTTCCGGCCCCTGGCCAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS TCA 72 bp | TTCAGCCGGTTCTCTTCTAGATGTAGGCTCAGCAGCTaGGGCAGGGCTTGGAAATCGCAGTCTCGGGCATCT | + |
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Preference number: 6 (lower is better) Translates to: FSRFSSRCRLSS*GRAWKSQSRAS Trigger: AGATGCCCGAGACTGCGATTTCCAAGCCCTGCCTCAGCTGCTGAGCCTACATCTAGAAGAGAACCGGCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS GCA 72 bp | TGCAGCATGTTGGCAAAGTCTCCCGGTCCGACCCGCTaGAGTGGGTTTTTGTTCAGGTCTAGGAACTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: CSMLAKSPGPTR*SGFLFRSRNLS Trigger: GCTCAAGTTCCTAGACCTGAACAAAAACCCACTGCAGCGGGTCGGACCGGGAGACTTTGCCAACATGCTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS CAA 72 bp | ATCTCGAACCAGCGGCTGTCGATGGTCCTAAGCAGGTaGGAATTGAGGTGCAGTCTCAGCAGGTTACCCAGC | + |
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Preference number: 6 (lower is better) Translates to: ISNQRLSMVLSR*ELRCSLSRLPS Trigger: GCTGGGTAACCTGCTGAGACTGCACCTCAATTCCAACCTGCTTAGGACCATCGACAGCCGCTGGTTCGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS CAA 72 bp | TCCACCTTGTTGCCGCCAATCATGAGGATTTCCAAGTaGGGCAGCATCTCGAACCAGCGGCTGTCGATGGTC | + |
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Preference number: 6 (lower is better) Translates to: STLLPPIMRISK*GSISNQRLSMV Trigger: GACCATCGACAGCCGCTGGTTCGAGATGCTGCCCAACTTGGAAATCCTCATGATTGGCGGCAACAAGGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS CAA 72 bp | ATGTTGTTTAGTCCTAGTTCCTTGAGGTGCAGCATGTaGGCAAAGTCTCCCGGTCCGACCCGCTGCAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: MLFSPSSLRCSM*AKSPGPTRCSG Trigger: CCCACTGCAGCGGGTCGGACCGGGAGACTTTGCCAACATGCTGCACCTCAAGGAACTAGGACTAAACAACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS CAA 90 bp | AAGATGGCATCCACCTTGTTGCCGCCAATCATGAGGATTTCCAAGTaGGGCAGCATCTCGAACCAGCGGCTGTCGATGGTCCTAAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: KMASTLLPPIMRISK*GSISNQRLSMVLSR Trigger: CCTGCTTAGGACCATCGACAGCCGCTGGTTCGAGATGCTGCCCAACTTGGAAATCCTCATGATTGGCGGCAACAAGGTGGATGCCATCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS CAA 90 bp | TTGGCCAGGGGCCGGAAGTTCATGTCCAAGATGGCATCCACCTTGTaGCCGCCAATCATGAGGATTTCCAAGTTGGGCAGCATCTCGAAC | + |
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Preference number: 6 (lower is better) Translates to: LARGRKFMSKMASTL*PPIMRISKLGSISN Trigger: GTTCGAGATGCTGCCCAACTTGGAAATCCTCATGATTGGCGGCAACAAGGTGGATGCCATCTTGGACATGAACTTCCGGCCCCTGGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS CAA 90 bp | TTGTCGATGGAGACCAGTTCCTCCATGTTGTTTAGTCCTAGTTCCTaGAGGTGCAGCATGTTGGCAAAGTCTCCCGGTCCGACCCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LSMETSSSMLFSPSS*RCSMLAKSPGPTRC Trigger: GCAGCGGGTCGGACCGGGAGACTTTGCCAACATGCTGCACCTCAAGGAACTAGGACTAAACAACATGGAGGAACTGGTCTCCATCGACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS CCA 72 bp | GTGGTGAAAGGCGCGAGGATGGATGAAAGAAAGCCGTaGGTTGTTGGTGATGTCCAACTTGGTCAGCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: VVKGARMDERKP*VVGDVQLGQLR Trigger: CCTGAGCTGACCAAGTTGGACATCACCAACAACCCACGGCTTTCTTTCATCCATCCTCGCGCCTTTCACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS CCA 72 bp | GCTAGACCAGGTGAGGTTGGTGGAGACTATATTGGGTaGGGGTGCCCAAAACAGCAGGATGTGATATGGGTG | + |
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Preference number: 6 (lower is better) Translates to: ARPGEVGGDYIG*GCPKQQDVIWV Trigger: CACCCATATCACATCCTGCTGTTTTGGGCACCCCCACCCAATATAGTCTCCACCAACCTCACCTGGTCTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS CAA 72 bp | AGGGGCCGGAAGTTCATGTCCAAGATGGCATCCACCTaGTTGCCGCCAATCATGAGGATTTCCAAGTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: RGRKFMSKMAST*LPPIMRISKLG Trigger: GCCCAACTTGGAAATCCTCATGATTGGCGGCAACAAGGTGGATGCCATCTTGGACATGAACTTCCGGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS TCA 72 bp | TGTCCAAGATGGCATCCACCTTGTTGCCGCCAATCATaGGGATTTCCAAGTTGGGCAGCATCTCGAACCAGC | + |
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Preference number: 6 (lower is better) Translates to: CPRWHPPCCRQS*GFPSWAASRTS Trigger: GCTGGTTCGAGATGCTGCCCAACTTGGAAATCCTCATGATTGGCGGCAACAAGGTGGATGCCATCTTGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS CAA 90 bp | AGTTCCTCCATGTTGTTTAGTCCTAGTTCCTTGAGGTGCAGCATGTaGGCAAAGTCTCCCGGTCCGACCCGCTGCAGTGGGTTTTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: SSSMLFSPSSLRCSM*AKSPGPTRCSGFLF Trigger: GAACAAAAACCCACTGCAGCGGGTCGGACCGGGAGACTTTGCCAACATGCTGCACCTCAAGGAACTAGGACTAAACAACATGGAGGAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS CAA 72 bp | AAGGCGCGAGGATGGATGAAAGAAAGCCGTGGGTTGTaGGTGATGTCCAACTTGGTCAGCTCAGGGAGATTT | + |
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Preference number: 6 (lower is better) Translates to: KARGWMKESRGL*VMSNLVSSGRF Trigger: AAATCTCCCTGAGCTGACCAAGTTGGACATCACCAACAACCCACGGCTTTCTTTCATCCATCCTCGCGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS CAA 90 bp | GTGATGTCCAACTTGGTCAGCTCAGGGAGATTTACCAGAGCAAACTaGTCGATGGAGACCAGTTCCTCCATGTTGTTTAGTCCTAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: VMSNLVSSGRFTRAN*SMETSSSMLFSPSS Trigger: GGAACTAGGACTAAACAACATGGAGGAACTGGTCTCCATCGACAAGTTTGCTCTGGTAAATCTCCCTGAGCTGACCAAGTTGGACATCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS CAA 72 bp | AGAGCAAACTTGTCGATGGAGACCAGTTCCTCCATGTaGTTTAGTCCTAGTTCCTTGAGGTGCAGCATGTTG | + |
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Preference number: 6 (lower is better) Translates to: RANLSMETSSSM*FSPSSLRCSML Trigger: CAACATGCTGCACCTCAAGGAACTAGGACTAAACAACATGGAGGAACTGGTCTCCATCGACAAGTTTGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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| CDS CAA 90 bp | AGATTTACCAGAGCAAACTTGTCGATGGAGACCAGTTCCTCCATGTaGTTTAGTCCTAGTTCCTTGAGGTGCAGCATGTTGGCAAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: RFTRANLSMETSSSM*FSPSSLRCSMLAKS Trigger: AGACTTTGCCAACATGCTGCACCTCAAGGAACTAGGACTAAACAACATGGAGGAACTGGTCTCCATCGACAAGTTTGCTCTGGTAAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027706.4 |
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