Pregenerated sensors for LRRN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034648Ensembl transcript IDs: ENSMUST00000049285.10
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCTACAAAGGATCTAATGCTGCTTCCAAACCCTATGTTAGCTGTTaGGAGGCCGGTTCGGTTCGGTTCTTCGTATTGATGGCTTCAGAA | + |
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Preference number: 1 (lower is better) Translates to: CYKGSNAASKPYVSC*EAGSVRFFVLMASE Trigger: TTCTGAAGCCATCAATACGAAGAACCGAACCGAACCGGCCTCTCAACAGCTAACATAGGGTTTGGAAGCAGCATTAGATCCTTTGTAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| 3UTR-3UTR GCA 90 bp | AAACACAAACTGGAAGCTGAGAGTCACCACCAGCTGTGTCCACCCCCTTGCGATGCAAAAATGTCTTTGTaGTCCTTACTACCAGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: KHKLEAESHHQLCPPPCDAKMSL*SLLPEA Trigger: TGCTTCTGGTAGTAAGGAGCACAAAGACATTTTTGC...ATCGCAAGGGGGTGGACACAGCTGGTGGTGACTCTCAGCTTCCAGTTTGTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| 3UTR-3UTR TCA 90 bp | GAGTTAAAGTCTGTAGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACACACAAACTGGAAGCTaGGAGTCACCACCAGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: ELKSVDQIATKDLMLLPNTQTGS*ESPPAV Trigger: CACAGCTGGTGGTGACTCTCAGCTTCCAGTTTGTGT...GTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCTACAGACTTTAACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| 3UTR-3UTR TCA 90 bp | AGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACCCTATGTTAGCTGTTTCGGTTCTTCGTATTaGTGGCTTCAGAAGAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: RPDCYKGSNAASKPYVSCFGSSY*WLQKKG Trigger: CCCTTTCTTCTGAAGCCATCAATACGAAGAACCGAA...ACAGCTAACATAGGGTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| 3UTR TCA 72 bp | GCTGTTGAGAGGCCGGTTCGGTTCGGTTCTTCGTATTaGTGGCTTCAGAAGAAAGGGGTCAAGCACAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: AVERPVRFGSSY*WLQKKGVKHRR Trigger: TCTCCTGTGCTTGACCCCTTTCTTCTGAAGCCATCAATACGAAGAACCGAACCGAACCGGCCTCTCAACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| 3UTR-3UTR CAA 90 bp | AAACACAAACTGGAAGCTGAGAGTCACCACCAGCTGTGTCCACCCCCTTGCGATAAAGCAAAAATGTCTTaGTGCTCCTTACTACCAGAA | + |
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Preference number: 3 (lower is better) Translates to: KHKLEAESHHQLCPPPCDKAKMS*CSLLPE Trigger: TTCTGGTAGTAAGGAGCACAAAGACATTTTTGCTTT...ATCGCAAGGGGGTGGACACAGCTGGTGGTGACTCTCAGCTTCCAGTTTGTGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| 3UTR TCA 72 bp | AATGATAAGGATAAAAACCAAACACAAACTGGAAGCTaGGAGTCACCACCAGCTGTGTCCACCCCCTTGCGA | + |
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Preference number: 3 (lower is better) Translates to: NDKDKNQTQTGS*ESPPAVSTPLR Trigger: TCGCAAGGGGGTGGACACAGCTGGTGGTGACTCTCAGCTTCCAGTTTGTGTTTGGTTTTTATCCTTATCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| 3UTR-3UTR CAA 90 bp | GAGTTAAAGTCTGTAGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACGCTGTGTCCACCCCCTaGCGATACGCTATACTAAAA | + |
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Preference number: 3 (lower is better) Translates to: ELKSVDQIATKDLMLLPNAVSTP*RYAILK Trigger: TTTTAGTATAGCGTATCGCAAGGGGGTGGACACAGC...GTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCTACAGACTTTAACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR CCA 90 bp | AAACACAAACTGGAAGCTGAGAGTCACCACCAGCTGTGTCCACCCCCTTGCGATCAACCTGGGTTGGCTTaGTGTCTGCCGAGCCATCTT | + |
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Preference number: 4 (lower is better) Translates to: KHKLEAESHHQLCPPPCDQPGLA*CLPSHL Trigger: AAGATGGCTCGGCAGACACCAAGCCAACCCAGGTTG...ATCGCAAGGGGGTGGACACAGCTGGTGGTGACTCTCAGCTTCCAGTTTGTGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR GCA 90 bp | TCCACCCATCCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCACCTCCTTCACCTGCTaGCCCCTGTATTCCGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: STHPLRSATTSKVKSTKVTSFTC*PLYSGG Trigger: GCCACCGGAATACAGGGGGCAGCAGGTGAAGGAGGT...GACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGGATGGGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR TCA 90 bp | TCCACCCATCCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCCCAGCTCGGTCAAGTTaGAGAGCTGCTGCAGCTCGT | + |
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Preference number: 4 (lower is better) Translates to: STHPLRSATTSKVKSTKVPARSS*RAAAAR Trigger: ACGAGCTGCAGCAGCTCTTCAACTTGACCGAGCTGG...GACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGGATGGGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR GCA 90 bp | TCCACCCATCCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCAGGACCTCCTTCACCTaGTGCCCCCTGTATTCCGGT | + |
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Preference number: 4 (lower is better) Translates to: STHPLRSATTSKVKSTKVRTSFT*CPLYSG Trigger: ACCGGAATACAGGGGGCAGCAGGTGAAGGAGGTCCT...GACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGGATGGGTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR GCA 90 bp | TCCACCCATCCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCTGCCACTCGAGTGTCTaGTCCTTGGACATTCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: STHPLRSATTSKVKSTKVCHSSV*SLDILG Trigger: GCCCAGAATGTCCAAGGAGCAGACACTCGAGTGGCA...GACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGGATGGGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR CCA 90 bp | CCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCTTCTTCACCAAGCCCAGCACCACCTaGCAAGCTGCTTTCCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: PLRSATTSKVKSTKVFFTKPSTT*QAAFPV Trigger: CACTGGGAAAGCAGCTTGCCAGGTGGTGCTGGGCTT...GGTGAAGAAGACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR CCA 90 bp | TCCACCCATCCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCCTGGATGTGTCAACCTaGGTTGGCTTGGTGTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: STHPLRSATTSKVKSTKVLDVST*VGLVSA Trigger: GGCAGACACCAAGCCAACCCAGGTTGACACATCCAG...GACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGGATGGGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR TCA 90 bp | TCCACCCATCCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCGGTTGCTGTGGATGCTaGTCTCACGCAGATTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: STHPLRSATTSKVKSTKVGCCGC*SHADWE Trigger: TTCCCAATCTGCGTGAGATCAGCATCCACAGCAACC...GACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGGATGGGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR CCA 90 bp | CCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCTTCTTCACCGGTTGCCAGGGATCCTaGTTAGGCGGAGGTCATTAC | + |
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Preference number: 4 (lower is better) Translates to: PLRSATTSKVKSTKVFFTGCQGS*LGGGHY Trigger: GTAATGACCTCCGCCTAACCAGGATCCCTGGCAACC...GGTGAAGAAGACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR CCA 90 bp | TCCACCCATCCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCGTTCTGGCTCAGCCATaGCCCGACAGTCTAGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: STHPLRSATTSKVKSTKVVLAQP*PDSLGK Trigger: TTTTCCTAGACTGTCGGGCCATGGCTGAGCCAGAAC...GACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGGATGGGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR TCA 90 bp | AAACACAAACTGGAAGCTGAGAGTCACCACCAGCTGTGTCCACCCCCTTGCGATTATTTCCAATGGGAGTaGCCCAGTAAATCTCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: KHKLEAESHHQLCPPPCDYFQWE*PSKSLV Trigger: AACCAGAGATTTACTGGGTCACTCCCATTGGAAATA...ATCGCAAGGGGGTGGACACAGCTGGTGGTGACTCTCAGCTTCCAGTTTGTGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR GCA 90 bp | AGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACCCTATGTTAGCTGTCCGCAGCAAGGGCGGTaGTGGTTTCATGGTCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: RPDCYKGSNAASKPYVSCPQQGR*WFHGQR Trigger: TCTCTGACCATGAAACCAGCACCGCCCTTGCTGCGG...ACAGCTAACATAGGGTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR CCA 90 bp | CCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCTTCTTCACCTGTATTCCGGTGGCATaGCACAGAACATGGAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: PLRSATTSKVKSTKVFFTCIPVA*HRTWRG Trigger: CCCTCTCCATGTTCTGTGCCATGCCACCGGAATACA...GGTGAAGAAGACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR CCA 90 bp | TCCACCCATCCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCTGCTCACTTGAGTCCTaGATTAGGACCTCCTTCACC | + |
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Preference number: 4 (lower is better) Translates to: STHPLRSATTSKVKSTKVCSLES*IRTSFT Trigger: GGTGAAGGAGGTCCTAATCCAGGACTCAAGTGAGCA...GACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGGATGGGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR CCA 90 bp | CCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCTTCTTCACCGACCCAGTAAATCTCTaGTTCTGGCTCAGCCATGGC | + |
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Preference number: 4 (lower is better) Translates to: PLRSATTSKVKSTKVFFTDPVNL*FWLSHG Trigger: GCCATGGCTGAGCCAGAACCAGAGATTTACTGGGTC...GGTGAAGAAGACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR CCA 90 bp | CCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCTTCTTCACCGCTCCTTGGACATTCTaGGCAACGCAGGTGTACCTT | + |
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Preference number: 4 (lower is better) Translates to: PLRSATTSKVKSTKVFFTAPWTF*ATQVYL Trigger: AAGGTACACCTGCGTTGCCCAGAATGTCCAAGGAGC...GGTGAAGAAGACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR CCA 90 bp | AGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACCCTATGTTAGCTGTTGTGTCAACCTGGGTTaGCTTGGTGTCTGCCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: RPDCYKGSNAASKPYVSCCVNLG*LGVCRA Trigger: GGCTCGGCAGACACCAAGCCAACCCAGGTTGACACA...ACAGCTAACATAGGGTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR CCA 90 bp | AAACACAAACTGGAAGCTGAGAGTCACCACCAGCTGTGTCCACCCCCTTGCGATACATGTAATAGCTTCTaGATGTGTCAACCTGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: KHKLEAESHHQLCPPPCDTCNSF*MCQPGL Trigger: CAACCCAGGTTGACACATCCAGAAGCTATTACATGT...ATCGCAAGGGGGTGGACACAGCTGGTGGTGACTCTCAGCTTCCAGTTTGTGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR CCA 90 bp | CCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCTTCTTCACCTACAATCCACGGTGGTaGCTTCTCTGTAGGTGGACT | + |
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Preference number: 4 (lower is better) Translates to: PLRSATTSKVKSTKVFFTYNPRW*LLCRWT Trigger: AGTCCACCTACAGAGAAGCCACCACCGTGGATTGTA...GGTGAAGAAGACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR CCA 90 bp | AGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACCCTATGTTAGCTGTTGCAGGGTTGTGAGCTaGGTCAAGTTTGCCAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: RPDCYKGSNAASKPYVSCCRVVS*VKFASP Trigger: AGGGCTGGCAAACTTGACCCAGCTCACAACCCTGCA...ACAGCTAACATAGGGTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR CCA 90 bp | CCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCTTCTTCACCCGGAAAGCCAAACGGTaGATGTATGACAGTTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: PLRSATTSKVKSTKVFFTRKAKR*MYDSLG Trigger: CCCCAAACTGTCATACATCCACCGTTTGGCTTTCCG...GGTGAAGAAGACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR CCA 90 bp | AGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACCCTATGTTAGCTGTCTCAGCGGGTTGCTGTaGATGCTGATCTCACGCAGA | + |
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Preference number: 4 (lower is better) Translates to: RPDCYKGSNAASKPYVSCLSGLL*MLISRR Trigger: TCTGCGTGAGATCAGCATCCACAGCAACCCGCTGAG...ACAGCTAACATAGGGTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR TCA 90 bp | TCCACCCATCCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCGCTCTCCCATGTTGTTaGTTCCCAGTTCTTTTAACC | + |
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Preference number: 4 (lower is better) Translates to: STHPLRSATTSKVKSTKVALPCC*FPVLLT Trigger: GGTTAAAAGAACTGGGAATCAACAACATGGGAGAGC...GACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGGATGGGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR GCA 90 bp | GAGTTAAAGTCTGTAGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACGTCAAGTTGAAGAGCTaGTGCAGCTCGTCCACGGTC | + |
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Preference number: 4 (lower is better) Translates to: ELKSVDQIATKDLMLLPNVKLKS*CSSSTV Trigger: GACCGTGGACGAGCTGCAGCAGCTCTTCAACTTGAC...GTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCTACAGACTTTAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR GCA 90 bp | TCCACCCATCCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCATTAACCTTGATAGTTaGCACTCGAGTGTCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: STHPLRSATTSKVKSTKVINLDS*HSSVCS Trigger: GGAGCAGACACTCGAGTGGCAACTATCAAGGTTAAT...GACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGGATGGGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR GCA 90 bp | AGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACCCTATGTTAGCTGTGGTTGGCTTGGTGTCTaGCGAGCCATCTTTGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: RPDCYKGSNAASKPYVSCGWLGV*RAIFVL Trigger: AAGGACAAAGATGGCTCGGCAGACACCAAGCCAACC...ACAGCTAACATAGGGTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR CCA 90 bp | AGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACCCTATGTTAGCTGTCCAGAGGTTAATGAGTaGGGGGTACAGCTCGTTCAG | + |
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Preference number: 4 (lower is better) Translates to: RPDCYKGSNAASKPYVSCPEVNE*GVQLVQ Trigger: CTGAACGAGCTGTACCCCCCACTCATTAACCTCTGG...ACAGCTAACATAGGGTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR TCA 90 bp | GAGTTAAAGTCTGTAGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACCTAGATGCAGGGTTGTaGGCTGGGTCAAGTTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: ELKSVDQIATKDLMLLPNLDAGL*AGSSLP Trigger: TGGCAAACTTGACCCAGCTCACAACCCTGCATCTAG...GTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCTACAGACTTTAACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR CCA 90 bp | TCCACCCATCCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCGAGCTTTGTCAATTCTaGCAAGTTATCCAGGGCATA | + |
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Preference number: 4 (lower is better) Translates to: STHPLRSATTSKVKSTKVELCQF*QVIQGI Trigger: TATGCCCTGGATAACTTGCCAGAATTGACAAAGCTC...GACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGGATGGGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR CCA 90 bp | TCCACCCATCCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCGGATGTATGACAGTTTaGGGTTATTGGTTGCTTCGA | + |
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Preference number: 4 (lower is better) Translates to: STHPLRSATTSKVKSTKVGCMTV*GYWLLR Trigger: TCGAAGCAACCAATAACCCCAAACTGTCATACATCC...GACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGGATGGGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR CCA 90 bp | AGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACCCTATGTTAGCTGTCATCTACTGGCACCCTaGCTGTGTATGTTATGTGGG | + |
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Preference number: 4 (lower is better) Translates to: RPDCYKGSNAASKPYVSCHLLAP*LCMLCG Trigger: CCCACATAACATACACAGCCAGGGTGCCAGTAGATG...ACAGCTAACATAGGGTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR TCA 90 bp | AGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACCCTATGTTAGCTGTGGTTTTCCCCAATCATaGGAATTTCCAGGTTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: RPDCYKGSNAASKPYVSCGFPQS*EFPGWE Trigger: CTCCCAACCTGGAAATTCTCATGATTGGGGAAAACC...ACAGCTAACATAGGGTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR TCA 90 bp | AGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACCCTATGTTAGCTGTTTCCGGGAACATCAGTaGGGTACATTCCTGCTAACA | + |
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Preference number: 4 (lower is better) Translates to: RPDCYKGSNAASKPYVSCFREHQ*GTFLLT Trigger: TGTTAGCAGGAATGTACCTCACTGATGTTCCCGGAA...ACAGCTAACATAGGGTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR TCA 90 bp | TCCACCCATCCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCCAGCTTGTATTTGTCTaGAAGAGTTTCCACGGTTAT | + |
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Preference number: 4 (lower is better) Translates to: STHPLRSATTSKVKSTKVQLVFV*KSFHGY Trigger: ATAACCGTGGAAACTCTTTCAGACAAATACAAGCTG...GACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGGATGGGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR TCA 90 bp | GAGTTAAAGTCTGTAGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACGGATGTTGGACACCGTaGGACACACTTCATAATCCG | + |
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Preference number: 4 (lower is better) Translates to: ELKSVDQIATKDLMLLPNGCWTP*DTLHNP Trigger: CGGATTATGAAGTGTGTCTCACGGTGTCCAACATCC...GTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCTACAGACTTTAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR CCA 90 bp | GAGTTAAAGTCTGTAGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACCATTACAATCCACGGTaGTGGCTTCTCTGTAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: ELKSVDQIATKDLMLLPNHYNPR*WLLCRW Trigger: CCACCTACAGAGAAGCCACCACCGTGGATTGTAATG...GTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCTACAGACTTTAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR CCA 90 bp | GAGTTAAAGTCTGTAGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACGCTCGTCCACGGTCTTaGCGATGTTATTGCTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: ELKSVDQIATKDLMLLPNARPRS*RCYCSV Trigger: TACAGAGCAATAACATCGCCAAGACCGTGGACGAGC...GTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCTACAGACTTTAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS-3UTR TCA 90 bp | AGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACCCTATGTTAGCTGTGTTCTTGAAGGTTGCTaGGGTCTTGCAGACAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: RPDCYKGSNAASKPYVSCVLEGC*GLADSN Trigger: ATTACTGTCTGCAAGACCTCAGCAACCTTCAAGAAC...ACAGCTAACATAGGGTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR TCA 90 bp | CCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCTTCTTCACCCAAGTTGAGGGACTTTaGTCAGTTTGTTGTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLRSATTSKVKSTKVFFTQVEGL*SVCCHR Trigger: TCTATGACAACAAACTGATCAAAGTCCCTCAACTTG...GGTGAAGAAGACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CCA 90 bp | CCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCTTCTTCACCTCACTTTCAACTTATTaGAATTCAGGTGCAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLRSATTSKVKSTKVFFTSLSTY*NSGAAS Trigger: TGAGGCTGCACCTGAATTCCAATAAGTTGAAAGTGA...GGTGAAGAAGACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CCA 90 bp | GAGTTAAAGTCTGTAGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACTTTCCAGGTTGGGAGTaGAATCAAACCAGCGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: ELKSVDQIATKDLMLLPNFPGWE*NQTSGY Trigger: ATAGCCGCTGGTTTGATTCCACTCCCAACCTGGAAA...GTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCTACAGACTTTAACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR TCA 90 bp | GAGTTAAAGTCTGTAGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACTTTTGCAGGGCAAGTTaGGGGACTTTGATCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ELKSVDQIATKDLMLLPNFCRAS*GTLISL Trigger: CAAACTGATCAAAGTCCCTCAACTTGCCCTGCAAAA...GTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCTACAGACTTTAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR TCA 90 bp | GAGTTAAAGTCTGTAGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACCAAACGGTGGATGTATaGCAGTTTGGGGTTATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ELKSVDQIATKDLMLLPNQTVDV*QFGVIG Trigger: ACCAATAACCCCAAACTGTCATACATCCACCGTTTG...GTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCTACAGACTTTAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR TCA 90 bp | AGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACCCTATGTTAGCTGTCTTCATAGTGGCAGATaGCCATTTCAAGTTCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: RPDCYKGSNAASKPYVSCLHSGR*PFQVRC Trigger: ACATCGAACTTGAAATGGTCATCTGCCACTATGAAG...ACAGCTAACATAGGGTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CCA 90 bp | GAGTTAAAGTCTGTAGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACTCACAAACACAAAGCTaGGGACACTCACTAGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ELKSVDQIATKDLMLLPNSQTQS*GHSLVS Trigger: ACTGACTAGTGAGTGTCCCCAGCTTTGTGTTTGTGA...GTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCTACAGACTTTAACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CCA 90 bp | GAGTTAAAGTCTGTAGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACTTTGTAAAGTTGTTCTaGGAGAAATCCAGCTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ELKSVDQIATKDLMLLPNFVKLF*EKSSSV Trigger: GACCGAGCTGGATTTCTCCCAGAACAACTTTACAAA...GTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCTACAGACTTTAACTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR GCA 90 bp | GAGTTAAAGTCTGTAGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACTTATTGGAATTCAGGTaGAGCCTCAAGAGATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ELKSVDQIATKDLMLLPNLLEFR*SLKRFF Trigger: GAAAAATCTCTTGAGGCTGCACCTGAATTCCAATAA...GTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCTACAGACTTTAACTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS GCA 90 bp | AGGCACTGCTCACTTGAGTCCTGGATTAGGACCTCCTTCACCTGCTaGCCCCTGTATTCCGGTGGCATGGCACAGAACATGGAGAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RHCSLESWIRTSFTC*PLYSGGMAQNMERG Trigger: GCCCCTCTCCATGTTCTGTGCCATGCCACCGGAATACAGGGGGCAGCAGGTGAAGGAGGTCCTAATCCAGGACTCAAGTGAGCAGTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS GCA 90 bp | GGGAGGCACTGCTCACTTGAGTCCTGGATTAGGACCTCCTTCACCTaGTGCCCCCTGTATTCCGGTGGCATGGCACAGAACATGGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GRHCSLESWIRTSFT*CPLYSGGMAQNMER Trigger: CCTCTCCATGTTCTGTGCCATGCCACCGGAATACAGGGGGCAGCAGGTGAAGGAGGTCCTAATCCAGGACTCAAGTGAGCAGTGCCTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CCA 90 bp | GCAAACATGGACCCCATCACCGCAGCAAGGGCGGTGCTGGTTTCATaGTCAGAGATGTCCAGGGCGAAGGCAGCGGTTTTGGTTGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: ANMDPITAARAVLVS*SEMSRAKAAVLVVT Trigger: TGTCACAACCAAAACCGCTGCCTTCGCCCTGGACATCTCTGACCATGAAACCAGCACCGCCCTTGCTGCGGTGATGGGGTCCATGTTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CCA 90 bp | AATGTATCGTGCGATATCATCGGGAGGCACTGCTCACTTGAGTCCTaGATTAGGACCTCCTTCACCTGCTGCCCCCTGTATTCCGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: NVSCDIIGRHCSLES*IRTSFTCCPLYSGG Trigger: GCCACCGGAATACAGGGGGCAGCAGGTGAAGGAGGTCCTAATCCAGGACTCAAGTGAGCAGTGCCTCCCGATGATATCGCACGATACATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | AAACACAAACTGGAAGCTGAGAGTCACCACCAGCTGTGTCCACCCCCTTGCGATGAGCCATCTTTGTCCTaGTCACTGTCAGCTTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KHKLEAESHHQLCPPPCDEPSLS*SLSASQ Trigger: CTGGGAAGCTGACAGTGACAAGGACAAAGATGGCTC...ATCGCAAGGGGGTGGACACAGCTGGTGGTGACTCTCAGCTTCCAGTTTGTGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS TCA 90 bp | TCTCGAGGCTATCCAAGCCTACCAAGGCGTTTCCGGGAACATCAGTaGGGTACATTCCTGCTAACACTAGGCTTCTCAGGTTGGAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SRGYPSLPRRFREHQ*GTFLLTLGFSGWRE Trigger: CTCTCTCCAACCTGAGAAGCCTAGTGTTAGCAGGAATGTACCTCACTGATGTTCCCGGAAACGCCTTGGTAGGCTTGGATAGCCTCGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS TCA 90 bp | GATGTCCAGGGCGAAGGCAGCGGTTTTGGTTGTGACATTGACACATaGCTTCTGAGTCTGCTGATGGATGTTGGACACCGTGAGACACAC | + |
|
Preference number: 5 (lower is better) Translates to: DVQGEGSGFGCDIDT*LLSLLMDVGHRETH Trigger: GTGTGTCTCACGGTGTCCAACATCCATCAGCAGACTCAGAAGTCATGTGTCAATGTCACAACCAAAACCGCTGCCTTCGCCCTGGACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | AAACACAAACTGGAAGCTGAGAGTCACCACCAGCTGTGTCCACCCCCTTGCGATACTAGGCTTCTCAGGTaGGAGAGAGGTCTGAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KHKLEAESHHQLCPPPCDTRLLR*ERGLKF Trigger: GAACTTCAGACCTCTCTCCAACCTGAGAAGCCTAGT...ATCGCAAGGGGGTGGACACAGCTGGTGGTGACTCTCAGCTTCCAGTTTGTGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | TCCACCCATCCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCTCGAGTGTCTGCTCCTaGGACATTCTGGGCAACGCA | + |
|
Preference number: 5 (lower is better) Translates to: STHPLRSATTSKVKSTKVSSVCS*DILGNA Trigger: TGCGTTGCCCAGAATGTCCAAGGAGCAGACACTCGA...GACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGGATGGGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | CCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCTTCTTCACCTCAACCTGGGTTGGCTaGGTGTCTGCCGAGCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: PLRSATTSKVKSTKVFFTSTWVG*VSAEPS Trigger: AGATGGCTCGGCAGACACCAAGCCAACCCAGGTTGA...GGTGAAGAAGACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS TCA 90 bp | AGTGTCTGCTCCTTGGACATTCTGGGCAACGCAGGTGTACCTTCCTaGGTCTTCAATCTGTATGTTTGCTATCTCCAAGGTGCCCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: SVCSLDILGNAGVPS*VFNLYVCYLQGALT Trigger: AGTGAGGGCACCTTGGAGATAGCAAACATACAGATTGAAGACTCAGGAAGGTACACCTGCGTTGCCCAGAATGTCCAAGGAGCAGACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS GCA 90 bp | AAGTTGTTCTGGGAGAAATCCAGCTCGGTCAAGTTGAAGAGCTGCTaGAGCTCGTCCACGGTCTTGGCGATGTTATTGCTCTGTAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: KLFWEKSSSVKLKSC*SSSTVLAMLLLCKR Trigger: TCTCTTACAGAGCAATAACATCGCCAAGACCGTGGACGAGCTGCAGCAGCTCTTCAACTTGACCGAGCTGGATTTCTCCCAGAACAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS GCA 90 bp | GTAAAGTTGTTCTGGGAGAAATCCAGCTCGGTCAAGTTGAAGAGCTaGTGCAGCTCGTCCACGGTCTTGGCGATGTTATTGCTCTGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: VKLFWEKSSSVKLKS*CSSSTVLAMLLLCK Trigger: CTTACAGAGCAATAACATCGCCAAGACCGTGGACGAGCTGCAGCAGCTCTTCAACTTGACCGAGCTGGATTTCTCCCAGAACAACTTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | AAACACAAACTGGAAGCTGAGAGTCACCACCAGCTGTGTCCACCCCCTTGCGATGTCTTGGCGATGTTATaGCTCTGTAAGAGAAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: KHKLEAESHHQLCPPPCDVLAML*LCKRST Trigger: AGTGCTTCTCTTACAGAGCAATAACATCGCCAAGAC...ATCGCAAGGGGGTGGACACAGCTGGTGGTGACTCTCAGCTTCCAGTTTGTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | TCCACCCATCCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCAGCTCGTCCACGGTCTaGGCGATGTTATTGCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: STHPLRSATTSKVKSTKVSSSTV*AMLLLC Trigger: ACAGAGCAATAACATCGCCAAGACCGTGGACGAGCT...GACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGGATGGGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | AAACACAAACTGGAAGCTGAGAGTCACCACCAGCTGTGTCCACCCCCTTGCGATTATGTTATGTGGGGGTaGTCGATCTTCATAGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KHKLEAESHHQLCPPPCDYVMWG*SIFIVA Trigger: TGCCACTATGAAGATCGACAACCCCCACATAACATA...ATCGCAAGGGGGTGGACACAGCTGGTGGTGACTCTCAGCTTCCAGTTTGTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CCA 90 bp | GTCAAGTTTGCCAGCCCTACCTCTTTGATGTTTGTAAAGTTGTTCTaGGAGAAATCCAGCTCGGTCAAGTTGAAGAGCTGCTGCAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: VKFASPTSLMFVKLF*EKSSSVKLKSCCSS Trigger: CGAGCTGCAGCAGCTCTTCAACTTGACCGAGCTGGATTTCTCCCAGAACAACTTTACAAACATCAAAGAGGTAGGGCTGGCAAACTTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | AAACACAAACTGGAAGCTGAGAGTCACCACCAGCTGTGTCCACCCCCTTGCGATTTTTTGCAGGGCAAGTaGAGGGACTTTGATCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: KHKLEAESHHQLCPPPCDFLQGK*RDFDQF Trigger: AAACTGATCAAAGTCCCTCAACTTGCCCTGCAAAAA...ATCGCAAGGGGGTGGACACAGCTGGTGGTGACTCTCAGCTTCCAGTTTGTGTTT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | AAACACAAACTGGAAGCTGAGAGTCACCACCAGCTGTGTCCACCCCCTTGCGATTCCATGAAGCGAATGTaGGTTTTGTTGGAGTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: KHKLEAESHHQLCPPPCDSMKRM*VLLELI Trigger: GATCAACTCCAACAAAACCAACATTCGCTTCATGGA...ATCGCAAGGGGGTGGACACAGCTGGTGGTGACTCTCAGCTTCCAGTTTGTGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CCA 90 bp | GAGCCGGCACACTACGGAAAGCCAAACGGTGGATGTATGACAGTTTaGGGTTATTGGTTGCTTCGAGCTTTGTCAATTCTGGCAAGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: EPAHYGKPNGGCMTV*GYWLLRALSILASY Trigger: ATAACTTGCCAGAATTGACAAAGCTCGAAGCAACCAATAACCCCAAACTGTCATACATCCACCGTTTGGCTTTCCGTAGTGTGCCGGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | GAGTTAAAGTCTGTAGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACTCCAGCTCGGTCAAGTaGAAGAGCTGCTGCAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: ELKSVDQIATKDLMLLPNSSSVK*KSCCSS Trigger: CGAGCTGCAGCAGCTCTTCAACTTGACCGAGCTGGA...GTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCTACAGACTTTAACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | TCCACCCATCCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCAAGGTTGCTGAGGTCTaGCAGACAGTAATCCGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: STHPLRSATTSKVKSTKVKVAEV*QTVIRH Trigger: ATGACGGATTACTGTCTGCAAGACCTCAGCAACCTT...GACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGGATGGGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | CCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCTTCTTCACCAAGCCAGAAAAGGCGTaGGCAGAGATTGTGCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: PLRSATTSKVKSTKVFFTKPEKA*AEIVLI Trigger: GATCAGCACAATCTCTGCCAACGCCTTTTCTGGCTT...GGTGAAGAAGACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | CCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCTTCTTCACCGCGAAGGCAGCGGTTTaGGTTGTGACATTGACACAT | + |
|
Preference number: 5 (lower is better) Translates to: PLRSATTSKVKSTKVFFTAKAAV*VVTLTH Trigger: ATGTGTCAATGTCACAACCAAAACCGCTGCCTTCGC...GGTGAAGAAGACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | GAGTTAAAGTCTGTAGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACATGTGTCAACCTGGGTaGGCTTGGTGTCTGCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ELKSVDQIATKDLMLLPNMCQPG*AWCLPS Trigger: GCTCGGCAGACACCAAGCCAACCCAGGTTGACACAT...GTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCTACAGACTTTAACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS TCA 90 bp | ATTTGTCTGAAAGAGTTTCCACGGTTATCTTATTTCCAATGGGAGTaGCCCAGTAAATCTCTGGTTCTGGCTCAGCCATGGCCCGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: ICLKEFPRLSYFQWE*PSKSLVLAQPWPDS Trigger: ACTGTCGGGCCATGGCTGAGCCAGAACCAGAGATTTACTGGGTCACTCCCATTGGAAATAAGATAACCGTGGAAACTCTTTCAGACAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CCA 90 bp | CACTACGGAAAGCCAAACGGTGGATGTATGACAGTTTGGGGTTATTaGTTGCTTCGAGCTTTGTCAATTCTGGCAAGTTATCCAGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: HYGKPNGGCMTVWGY*LLRALSILASYPGH Trigger: ATGCCCTGGATAACTTGCCAGAATTGACAAAGCTCGAAGCAACCAATAACCCCAAACTGTCATACATCCACCGTTTGGCTTTCCGTAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CCA 90 bp | AACATTAAGCTTTCTAGAGCCGGCACACTACGGAAAGCCAAACGGTaGATGTATGACAGTTTGGGGTTATTGGTTGCTTCGAGCTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: NIKLSRAGTLRKAKR*MYDSLGLLVASSFV Trigger: GACAAAGCTCGAAGCAACCAATAACCCCAAACTGTCATACATCCACCGTTTGGCTTTCCGTAGTGTGCCGGCTCTAGAAAGCTTAATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | GAGTTAAAGTCTGTAGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACGTGTCACTAGAGAGGTaGCCAGGGATCCTGGTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: ELKSVDQIATKDLMLLPNVSLER*PGILVR Trigger: CCTAACCAGGATCCCTGGCAACCTCTCTAGTGACAC...GTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCTACAGACTTTAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | TCCACCCATCCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCGTTGATGTAGAGTTCTaGAAGGTTGCTGAGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: STHPLRSATTSKVKSTKVVDVEF*KVAEVL Trigger: CAAGACCTCAGCAACCTTCAAGAACTCTACATCAAC...GACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGGATGGGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | AAACACAAACTGGAAGCTGAGAGTCACCACCAGCTGTGTCCACCCCCTTGCGATGCATTCAAGGCATTGTaGTTCAACATTAAGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KHKLEAESHHQLCPPPCDAFKAL*FNIKLS Trigger: AGAAAGCTTAATGTTGAACAACAATGCCTTGAATGC...ATCGCAAGGGGGTGGACACAGCTGGTGGTGACTCTCAGCTTCCAGTTTGTGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | CCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCTTCTTCACCCTGATCTCACGCAGATaGGGAAGAGATTCCACTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PLRSATTSKVKSTKVFFTLISRR*GRDSTV Trigger: AACAGTGGAATCTCTTCCCAATCTGCGTGAGATCAG...GGTGAAGAAGACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | TCCACCCATCCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCTTGGTTTTGTTGGAGTaGATCCAGTGGATGACACAG | + |
|
Preference number: 5 (lower is better) Translates to: STHPLRSATTSKVKSTKVLVLLE*IQWMTQ Trigger: CTGTGTCATCCACTGGATCAACTCCAACAAAACCAA...GACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGGATGGGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | TCCACCCATCCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCCGAATGTTGGTTTTGTaGGAGTTGATCCAGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: STHPLRSATTSKVKSTKVRMLVL*ELIQWM Trigger: CATCCACTGGATCAACTCCAACAAAACCAACATTCG...GACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGGATGGGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | TCCACCCATCCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCAAGCGAATGTTGGTTTaGTTGGAGTTGATCCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: STHPLRSATTSKVKSTKVKRMLV*LELIQW Trigger: CCACTGGATCAACTCCAACAAAACCAACATTCGCTT...GACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGGATGGGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS GCA 90 bp | TCAAACCAGCGGCTATCGATCACTTTCAACTTATTGGAATTCAGGTaGAGCCTCAAGAGATTTTTCAAGCCAGAAAAGGCGTTGGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SNQRLSITFNLLEFR*SLKRFFKPEKALAE Trigger: CTCTGCCAACGCCTTTTCTGGCTTGAAAAATCTCTTGAGGCTGCACCTGAATTCCAATAAGTTGAAAGTGATCGATAGCCGCTGGTTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS TCA 90 bp | GTTTGCTATCTCCAAGGTGCCCTCACTACTCAGCTTGTATTTGTCTaGAAGAGTTTCCACGGTTATCTTATTTCCAATGGGAGTGACCCA | + |
|
Preference number: 5 (lower is better) Translates to: VCYLQGALTTQLVFV*KSFHGYLISNGSDP Trigger: TGGGTCACTCCCATTGGAAATAAGATAACCGTGGAAACTCTTTCAGACAAATACAAGCTGAGTAGTGAGGGCACCTTGGAGATAGCAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | AGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACCCTATGTTAGCTGTAGGGTTCCATTAACCTaGATAGTTGCCACTCGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RPDCYKGSNAASKPYVSCRVPLT*IVATRV Trigger: CACTCGAGTGGCAACTATCAAGGTTAATGGAACCCT...ACAGCTAACATAGGGTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CCA 90 bp | GTGGACTGTGGGGTAAACCAAGGACGAATTTCACAAACACAAAGCTaGGGACACTCACTAGTCAGTATGGAAGATTCAGTTAATGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: VDCGVNQGRISQTQS*GHSLVSMEDSVNEV Trigger: AACTTCATTAACTGAATCTTCCATACTGACTAGTGAGTGTCCCCAGCTTTGTGTTTGTGAAATTCGTCCTTGGTTTACCCCACAGTCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | AGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACCCTATGTTAGCTGTACCAGCTCTCCCATGTaGTTGATTCCCAGTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RPDCYKGSNAASKPYVSCTSSPM*LIPSSF Trigger: AAAAGAACTGGGAATCAACAACATGGGAGAGCTGGT...ACAGCTAACATAGGGTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | AGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACCCTATGTTAGCTGTTGGATGTATGACAGTTaGGGGTTATTGGTTGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: RPDCYKGSNAASKPYVSCWMYDS*GLLVAS Trigger: CGAAGCAACCAATAACCCCAAACTGTCATACATCCA...ACAGCTAACATAGGGTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | AGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACCCTATGTTAGCTGTCTTCAATCTGTATGTTaGCTATCTCCAAGGTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RPDCYKGSNAASKPYVSCLQSVC*LSPRCP Trigger: AGGGCACCTTGGAGATAGCAAACATACAGATTGAAG...ACAGCTAACATAGGGTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | CCTCTCCGCTCTGCCACAACTAGCAAAGTCAAAAGTACAAAAGTCTTCTTCACCGATGGACGAGGTTTTTaGCATATACTTTTTCAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: PLRSATTSKVKSTKVFFTDGRGF*HILFQR Trigger: TCGCTGAAAAAGTATATGCAAAAAACCTCGTCCATC...GGTGAAGAAGACTTTTGTACTTTTGACTTTGCTAGTTGTGGCAGAGCGGAGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS TCA 90 bp | GGCTGTGTATGTTATGTGGGGGTTGTCGATCTTCATAGTGGCAGATaGCCATTTCAAGTTCGATGTCATGACATTGGAATTAACTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GCVCYVGVVDLHSGR*PFQVRCHDIGINFP Trigger: TGGAAAGTTAATTCCAATGTCATGACATCGAACTTGAAATGGTCATCTGCCACTATGAAGATCGACAACCCCCACATAACATACACAGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | AGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACCCTATGTTAGCTGTATCACTTTCAACTTATaGGAATTCAGGTGCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RPDCYKGSNAASKPYVSCITFNL*EFRCSL Trigger: GAGGCTGCACCTGAATTCCAATAAGTTGAAAGTGAT...ACAGCTAACATAGGGTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | GAGTTAAAGTCTGTAGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACCAAATTTGGAACTTTTaGCAGGGCAAGTTGAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ELKSVDQIATKDLMLLPNQIWNF*QGKLRD Trigger: GTCCCTCAACTTGCCCTGCAAAAAGTTCCAAATTTG...GTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCTACAGACTTTAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | AGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACCCTATGTTAGCTGTGTTTGGGGTTATTGGTaGCTTCGAGCTTTGTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: RPDCYKGSNAASKPYVSCVWGYW*LRALSI Trigger: AATTGACAAAGCTCGAAGCAACCAATAACCCCAAAC...ACAGCTAACATAGGGTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | AGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACCCTATGTTAGCTGTCTACTCAGCTTGTATTaGTCTGAAAGAGTTTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: RPDCYKGSNAASKPYVSCLLSLY*SERVST Trigger: CGTGGAAACTCTTTCAGACAAATACAAGCTGAGTAG...ACAGCTAACATAGGGTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | AGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACCCTATGTTAGCTGTTTGATGTTTGTAAAGTaGTTCTGGGAGAAATCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RPDCYKGSNAASKPYVSCLMFVK*FWEKSS Trigger: GCTGGATTTCTCCCAGAACAACTTTACAAACATCAA...ACAGCTAACATAGGGTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | GAGTTAAAGTCTGTAGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACACGGCATTCAAGGCATaGTTGTTCAACATTAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ELKSVDQIATKDLMLLPNTAFKA*LFNIKL Trigger: AAGCTTAATGTTGAACAACAATGCCTTGAATGCCGT...GTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCTACAGACTTTAACTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS-3UTR CAA 90 bp | AGACCAGATTGCTACAAAGGATCTAATGCTGCTTCCAAACCCTATGTTAGCTGTAGTCTAGGAAAAGTGTaGTACCAATGTCCATGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: RPDCYKGSNAASKPYVSCSLGKV*YQCPCL Trigger: TAAACATGGACATTGGTACAACACTTTTCCTAGACT...ACAGCTAACATAGGGTTTGGAAGCAGCATTAGATCCTTTGTAGCAATCTGGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS TCA 90 bp | GATGTCATGACATTGGAATTAACTTTCCAAGATACTAAAATCGAATaGGATTCTGTCTGTTTGACATATATTTTCAGCACCTGTGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: DVMTLELTFQDTKIE*DSVCLTYIFSTCAP Trigger: TGGTGCACAGGTGCTGAAAATATATGTCAAACAGACAGAATCTCATTCGATTTTAGTATCTTGGAAAGTTAATTCCAATGTCATGACATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS GCA 72 bp | CGGCAAACATGGACCCCATCACCGCAGCAAGGGCGGTaGTGGTTTCATGGTCAGAGATGTCCAGGGCGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RQTWTPSPQQGR*WFHGQRCPGRR Trigger: CCTTCGCCCTGGACATCTCTGACCATGAAACCAGCACCGCCCTTGCTGCGGTGATGGGGTCCATGTTTGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CCA 72 bp | CAAACATGGACCCCATCACCGCAGCAAGGGCGGTGCTaGTTTCATGGTCAGAGATGTCCAGGGCGAAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QTWTPSPQQGRC*FHGQRCPGRRQ Trigger: CTGCCTTCGCCCTGGACATCTCTGACCATGAAACCAGCACCGCCCTTGCTGCGGTGATGGGGTCCATGTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS GCA 72 bp | TGCTCACTTGAGTCCTGGATTAGGACCTCCTTCACCTaGTGCCCCCTGTATTCCGGTGGCATGGCACAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: CSLESWIRTSFT*CPLYSGGMAQN Trigger: GTTCTGTGCCATGCCACCGGAATACAGGGGGCAGCAGGTGAAGGAGGTCCTAATCCAGGACTCAAGTGAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS GCA 72 bp | TCACTTGAGTCCTGGATTAGGACCTCCTTCACCTGCTaGCCCCTGTATTCCGGTGGCATGGCACAGAACATG | + |
|
Preference number: 6 (lower is better) Translates to: SLESWIRTSFTC*PLYSGGMAQNM Trigger: CATGTTCTGTGCCATGCCACCGGAATACAGGGGGCAGCAGGTGAAGGAGGTCCTAATCCAGGACTCAAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CCA 72 bp | TGCGATATCATCGGGAGGCACTGCTCACTTGAGTCCTaGATTAGGACCTCCTTCACCTGCTGCCCCCTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: CDIIGRHCSLES*IRTSFTCCPLY Trigger: ATACAGGGGGCAGCAGGTGAAGGAGGTCCTAATCCAGGACTCAAGTGAGCAGTGCCTCCCGATGATATCGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CCA 72 bp | GTCCTTGTCACTGTCAGCTTCCCAGAGGTTAATGAGTaGGGGGTACAGCTCGTTCAGTGGGATGGACGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: VLVTVSFPEVNE*GVQLVQWDGRG Trigger: ACCTCGTCCATCCCACTGAACGAGCTGTACCCCCCACTCATTAACCTCTGGGAAGCTGACAGTGACAAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS GCA 72 bp | TGGGAGAAATCCAGCTCGGTCAAGTTGAAGAGCTGCTaGAGCTCGTCCACGGTCTTGGCGATGTTATTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: WEKSSSVKLKSC*SSSTVLAMLLL Trigger: GAGCAATAACATCGCCAAGACCGTGGACGAGCTGCAGCAGCTCTTCAACTTGACCGAGCTGGATTTCTCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS GCA 72 bp | GCTTCTGGATGTGTCAACCTGGGTTGGCTTGGTGTCTaGCGAGCCATCTTTGTCCTTGTCACTGTCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ASGCVNLGWLGV*RAIFVLVTVSF Trigger: GAAGCTGACAGTGACAAGGACAAAGATGGCTCGGCAGACACCAAGCCAACCCAGGTTGACACATCCAGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CAA 72 bp | GTAAAGTTGTTCTGGGAGAAATCCAGCTCGGTCAAGTaGAAGAGCTGCTGCAGCTCGTCCACGGTCTTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: VKLFWEKSSSVK*KSCCSSSTVLA Trigger: CGCCAAGACCGTGGACGAGCTGCAGCAGCTCTTCAACTTGACCGAGCTGGATTTCTCCCAGAACAACTTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CAA 72 bp | ATGTATCGTGCGATATCATCGGGAGGCACTGCTCACTaGAGTCCTGGATTAGGACCTCCTTCACCTGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: MYRAISSGGTAH*SPGLGPPSPAA Trigger: GGCAGCAGGTGAAGGAGGTCCTAATCCAGGACTCAAGTGAGCAGTGCCTCCCGATGATATCGCACGATACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CAA 72 bp | TGGGTTGGCTTGGTGTCTGCCGAGCCATCTTTGTCCTaGTCACTGTCAGCTTCCCAGAGGTTAATGAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: WVGLVSAEPSLS*SLSASQRLMSG Trigger: CCCACTCATTAACCTCTGGGAAGCTGACAGTGACAAGGACAAAGATGGCTCGGCAGACACCAAGCCAACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS GCA 72 bp | TTCTGGGAGAAATCCAGCTCGGTCAAGTTGAAGAGCTaGTGCAGCTCGTCCACGGTCTTGGCGATGTTATTG | + |
|
Preference number: 6 (lower is better) Translates to: FWEKSSSVKLKS*CSSSTVLAMLL Trigger: CAATAACATCGCCAAGACCGTGGACGAGCTGCAGCAGCTCTTCAACTTGACCGAGCTGGATTTCTCCCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CAA 72 bp | TCAACCTGGGTTGGCTTGGTGTCTGCCGAGCCATCTTaGTCCTTGTCACTGTCAGCTTCCCAGAGGTTAATG | + |
|
Preference number: 6 (lower is better) Translates to: STWVGLVSAEPS*SLSLSASQRLM Trigger: CATTAACCTCTGGGAAGCTGACAGTGACAAGGACAAAGATGGCTCGGCAGACACCAAGCCAACCCAGGTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CAA 90 bp | TCCAGCTCGGTCAAGTTGAAGAGCTGCTGCAGCTCGTCCACGGTCTaGGCGATGTTATTGCTCTGTAAGAGAAGCACTTGTGTGTCACTA | + |
|
Preference number: 6 (lower is better) Translates to: SSSVKLKSCCSSSTV*AMLLLCKRSTCVSL Trigger: TAGTGACACACAAGTGCTTCTCTTACAGAGCAATAACATCGCCAAGACCGTGGACGAGCTGCAGCAGCTCTTCAACTTGACCGAGCTGGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS GCA 72 bp | GGTTCCATTAACCTTGATAGTTGCCACTCGAGTGTCTaGTCCTTGGACATTCTGGGCAACGCAGGTGTACCT | + |
|
Preference number: 6 (lower is better) Translates to: GSINLDSCHSSV*SLDILGNAGVP Trigger: AGGTACACCTGCGTTGCCCAGAATGTCCAAGGAGCAGACACTCGAGTGGCAACTATCAAGGTTAATGGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CAA 72 bp | AGCTGCTGCAGCTCGTCCACGGTCTTGGCGATGTTATaGCTCTGTAAGAGAAGCACTTGTGTGTCACTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SCCSSSTVLAML*LCKRSTCVSLE Trigger: CTCTAGTGACACACAAGTGCTTCTCTTACAGAGCAATAACATCGCCAAGACCGTGGACGAGCTGCAGCAGCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CAA 90 bp | AAGTTGAAGAGCTGCTGCAGCTCGTCCACGGTCTTGGCGATGTTATaGCTCTGTAAGAGAAGCACTTGTGTGTCACTAGAGAGGTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: KLKSCCSSSTVLAML*LCKRSTCVSLERLP Trigger: TGGCAACCTCTCTAGTGACACACAAGTGCTTCTCTTACAGAGCAATAACATCGCCAAGACCGTGGACGAGCTGCAGCAGCTCTTCAACTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS TCA 72 bp | TATCCAAGCCTACCAAGGCGTTTCCGGGAACATCAGTaGGGTACATTCCTGCTAACACTAGGCTTCTCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: YPSLPRRFREHQ*GTFLLTLGFSG Trigger: ACCTGAGAAGCCTAGTGTTAGCAGGAATGTACCTCACTGATGTTCCCGGAAACGCCTTGGTAGGCTTGGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CCA 72 bp | CTTTCTAGAGCCGGCACACTACGGAAAGCCAAACGGTaGATGTATGACAGTTTGGGGTTATTGGTTGCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: LSRAGTLRKAKR*MYDSLGLLVAS Trigger: CGAAGCAACCAATAACCCCAAACTGTCATACATCCACCGTTTGGCTTTCCGTAGTGTGCCGGCTCTAGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CCA 72 bp | TGTAATAGCTTCTGGATGTGTCAACCTGGGTTGGCTTaGTGTCTGCCGAGCCATCTTTGTCCTTGTCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: CNSFWMCQPGLA*CLPSHLCPCHC Trigger: ACAGTGACAAGGACAAAGATGGCTCGGCAGACACCAAGCCAACCCAGGTTGACACATCCAGAAGCTATTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CAA 72 bp | CTCTGTAAGAGAAGCACTTGTGTGTCACTAGAGAGGTaGCCAGGGATCCTGGTTAGGCGGAGGTCATTACAA | + |
|
Preference number: 6 (lower is better) Translates to: LCKRSTCVSLER*PGILVRRRSLQ Trigger: TTGTAATGACCTCCGCCTAACCAGGATCCCTGGCAACCTCTCTAGTGACACACAAGTGCTTCTCTTACAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CAA 72 bp | GTCAAGTTGAAGAGCTGCTGCAGCTCGTCCACGGTCTaGGCGATGTTATTGCTCTGTAAGAGAAGCACTTGT | + |
|
Preference number: 6 (lower is better) Translates to: VKLKSCCSSSTV*AMLLLCKRSTC Trigger: ACAAGTGCTTCTCTTACAGAGCAATAACATCGCCAAGACCGTGGACGAGCTGCAGCAGCTCTTCAACTTGAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CAA 72 bp | AGCACCTGTGCACCATCTAGAAGGGTTCCATTAACCTaGATAGTTGCCACTCGAGTGTCTGCTCCTTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: STCAPSRRVPLT*IVATRVSAPWT Trigger: TGTCCAAGGAGCAGACACTCGAGTGGCAACTATCAAGGTTAATGGAACCCTTCTAGATGGTGCACAGGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CAA 72 bp | ACCACATGTAATAGCTTCTGGATGTGTCAACCTGGGTaGGCTTGGTGTCTGCCGAGCCATCTTTGTCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: TTCNSFWMCQPG*AWCLPSHLCPC Trigger: ACAAGGACAAAGATGGCTCGGCAGACACCAAGCCAACCCAGGTTGACACATCCAGAAGCTATTACATGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CAA 90 bp | ATGTTATTGCTCTGTAAGAGAAGCACTTGTGTGTCACTAGAGAGGTaGCCAGGGATCCTGGTTAGGCGGAGGTCATTACAATCCACGGTG | + |
|
Preference number: 6 (lower is better) Translates to: MLLLCKRSTCVSLER*PGILVRRRSLQSTV Trigger: CACCGTGGATTGTAATGACCTCCGCCTAACCAGGATCCCTGGCAACCTCTCTAGTGACACACAAGTGCTTCTCTTACAGAGCAATAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CAA 90 bp | AGCTGGGTCAAGTTTGCCAGCCCTACCTCTTTGATGTTTGTAAAGTaGTTCTGGGAGAAATCCAGCTCGGTCAAGTTGAAGAGCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SWVKFASPTSLMFVK*FWEKSSSVKLKSCC Trigger: GCAGCAGCTCTTCAACTTGACCGAGCTGGATTTCTCCCAGAACAACTTTACAAACATCAAAGAGGTAGGGCTGGCAAACTTGACCCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CAA 90 bp | AGATGCAGGGTTGTGAGCTGGGTCAAGTTTGCCAGCCCTACCTCTTaGATGTTTGTAAAGTTGTTCTGGGAGAAATCCAGCTCGGTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: RCRVVSWVKFASPTS*MFVKLFWEKSSSVK Trigger: CTTGACCGAGCTGGATTTCTCCCAGAACAACTTTACAAACATCAAAGAGGTAGGGCTGGCAAACTTGACCCAGCTCACAACCCTGCATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CCA 72 bp | GCCAGCCCTACCTCTTTGATGTTTGTAAAGTTGTTCTaGGAGAAATCCAGCTCGGTCAAGTTGAAGAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ASPTSLMFVKLF*EKSSSVKLKSC Trigger: GCAGCTCTTCAACTTGACCGAGCTGGATTTCTCCCAGAACAACTTTACAAACATCAAAGAGGTAGGGCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CCA 72 bp | TTTGGGGTTATTGGTTGCTTCGAGCTTTGTCAATTCTaGCAAGTTATCCAGGGCATAGCGGTCCACGGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: FGVIGCFELCQF*QVIQGIAVHGN Trigger: GTTTCCGTGGACCGCTATGCCCTGGATAACTTGCCAGAATTGACAAAGCTCGAAGCAACCAATAACCCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CAA 72 bp | TCTACTGGCACCCTGGCTGTGTATGTTATGTGGGGGTaGTCGATCTTCATAGTGGCAGATGACCATTTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: STGTLAVYVMWG*SIFIVADDHFK Trigger: CTTGAAATGGTCATCTGCCACTATGAAGATCGACAACCCCCACATAACATACACAGCCAGGGTGCCAGTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CAA 90 bp | TTGATGTTTGTAAAGTTGTTCTGGGAGAAATCCAGCTCGGTCAAGTaGAAGAGCTGCTGCAGCTCGTCCACGGTCTTGGCGATGTTATTG | + |
|
Preference number: 6 (lower is better) Translates to: LMFVKLFWEKSSSVK*KSCCSSSTVLAMLL Trigger: CAATAACATCGCCAAGACCGTGGACGAGCTGCAGCAGCTCTTCAACTTGACCGAGCTGGATTTCTCCCAGAACAACTTTACAAACATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
||
| CDS CAA 90 bp | AGAGCCGGCACACTACGGAAAGCCAAACGGTGGATGTATGACAGTTaGGGGTTATTGGTTGCTTCGAGCTTTGTCAATTCTGGCAAGTTA | + |
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Preference number: 6 (lower is better) Translates to: RAGTLRKAKRWMYDS*GLLVASSFVNSGKL Trigger: TAACTTGCCAGAATTGACAAAGCTCGAAGCAACCAATAACCCCAAACTGTCATACATCCACCGTTTGGCTTTCCGTAGTGTGCCGGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS CAA 90 bp | ACACTACGGAAAGCCAAACGGTGGATGTATGACAGTTTGGGGTTATaGGTTGCTTCGAGCTTTGTCAATTCTGGCAAGTTATCCAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: TLRKAKRWMYDSLGL*VASSFVNSGKLSRA Trigger: TGCCCTGGATAACTTGCCAGAATTGACAAAGCTCGAAGCAACCAATAACCCCAAACTGTCATACATCCACCGTTTGGCTTTCCGTAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS CAA 90 bp | TATATTTTCAGCACCTGTGCACCATCTAGAAGGGTTCCATTAACCTaGATAGTTGCCACTCGAGTGTCTGCTCCTTGGACATTCTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: YIFSTCAPSRRVPLT*IVATRVSAPWTFWA Trigger: TGCCCAGAATGTCCAAGGAGCAGACACTCGAGTGGCAACTATCAAGGTTAATGGAACCCTTCTAGATGGTGCACAGGTGCTGAAAATATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS TCA 72 bp | TCCTTGGACATTCTGGGCAACGCAGGTGTACCTTCCTaGGTCTTCAATCTGTATGTTTGCTATCTCCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: SLDILGNAGVPS*VFNLYVCYLQG Trigger: ACCTTGGAGATAGCAAACATACAGATTGAAGACTCAGGAAGGTACACCTGCGTTGCCCAGAATGTCCAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS CAA 72 bp | GTTGTGAGCTGGGTCAAGTTTGCCAGCCCTACCTCTTaGATGTTTGTAAAGTTGTTCTGGGAGAAATCCAGC | + |
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Preference number: 6 (lower is better) Translates to: VVSWVKFASPTS*MFVKLFWEKSS Trigger: GCTGGATTTCTCCCAGAACAACTTTACAAACATCAAAGAGGTAGGGCTGGCAAACTTGACCCAGCTCACAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS TCA 72 bp | AAAGAGTTTCCACGGTTATCTTATTTCCAATGGGAGTaGCCCAGTAAATCTCTGGTTCTGGCTCAGCCATGG | + |
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Preference number: 6 (lower is better) Translates to: KEFPRLSYFQWE*PSKSLVLAQPW Trigger: CCATGGCTGAGCCAGAACCAGAGATTTACTGGGTCACTCCCATTGGAAATAAGATAACCGTGGAAACTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS CCA 72 bp | CACTACGGAAAGCCAAACGGTGGATGTATGACAGTTTaGGGTTATTGGTTGCTTCGAGCTTTGTCAATTCTG | + |
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Preference number: 6 (lower is better) Translates to: HYGKPNGGCMTV*GYWLLRALSIL Trigger: CAGAATTGACAAAGCTCGAAGCAACCAATAACCCCAAACTGTCATACATCCACCGTTTGGCTTTCCGTAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS CAA 72 bp | GATTGTGCTGATCTGGTTGTGGTTGATGTAGAGTTCTaGAAGGTTGCTGAGGTCTTGCAGACAGTAATCCGT | + |
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Preference number: 6 (lower is better) Translates to: DCADLVVVDVEF*KVAEVLQTVIR Trigger: ACGGATTACTGTCTGCAAGACCTCAGCAACCTTCAAGAACTCTACATCAACCACAACCAGATCAGCACAATC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS CAA 72 bp | TGTATGACAGTTTGGGGTTATTGGTTGCTTCGAGCTTaGTCAATTCTGGCAAGTTATCCAGGGCATAGCGGT | + |
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Preference number: 6 (lower is better) Translates to: CMTVWGYWLLRA*SILASYPGHSG Trigger: ACCGCTATGCCCTGGATAACTTGCCAGAATTGACAAAGCTCGAAGCAACCAATAACCCCAAACTGTCATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS TCA 72 bp | CTCCAAGGTGCCCTCACTACTCAGCTTGTATTTGTCTaGAAGAGTTTCCACGGTTATCTTATTTCCAATGGG | + |
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Preference number: 6 (lower is better) Translates to: LQGALTTQLVFV*KSFHGYLISNG Trigger: CCCATTGGAAATAAGATAACCGTGGAAACTCTTTCAGACAAATACAAGCTGAGTAGTGAGGGCACCTTGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS CCA 72 bp | GTGTTAGGTTATATTCATGAACATCTACTGGCACCCTaGCTGTGTATGTTATGTGGGGGTTGTCGATCTTCA | + |
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Preference number: 6 (lower is better) Translates to: VLGYIHEHLLAP*LCMLCGGCRSS Trigger: TGAAGATCGACAACCCCCACATAACATACACAGCCAGGGTGCCAGTAGATGTTCATGAATATAACCTAACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS CAA 72 bp | AAGTTTGCCAGCCCTACCTCTTTGATGTTTGTAAAGTaGTTCTGGGAGAAATCCAGCTCGGTCAAGTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: KFASPTSLMFVK*FWEKSSSVKLK Trigger: CTTCAACTTGACCGAGCTGGATTTCTCCCAGAACAACTTTACAAACATCAAAGAGGTAGGGCTGGCAAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS CAA 72 bp | CCAAACGGTGGATGTATGACAGTTTGGGGTTATTGGTaGCTTCGAGCTTTGTCAATTCTGGCAAGTTATCCA | + |
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Preference number: 6 (lower is better) Translates to: PNGGCMTVWGYW*LRALSILASYP Trigger: TGGATAACTTGCCAGAATTGACAAAGCTCGAAGCAACCAATAACCCCAAACTGTCATACATCCACCGTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS CAA 72 bp | ACACTACGGAAAGCCAAACGGTGGATGTATGACAGTTaGGGGTTATTGGTTGCTTCGAGCTTTGTCAATTCT | + |
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Preference number: 6 (lower is better) Translates to: TLRKAKRWMYDS*GLLVASSFVNS Trigger: AGAATTGACAAAGCTCGAAGCAACCAATAACCCCAAACTGTCATACATCCACCGTTTGGCTTTCCGTAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS CAA 90 bp | TTGGGAGTGGAATCAAACCAGCGGCTATCGATCACTTTCAACTTATaGGAATTCAGGTGCAGCCTCAAGAGATTTTTCAAGCCAGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: LGVESNQRLSITFNL*EFRCSLKRFFKPEK Trigger: CTTTTCTGGCTTGAAAAATCTCTTGAGGCTGCACCTGAATTCCAATAAGTTGAAAGTGATCGATAGCCGCTGGTTTGATTCCACTCCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS CCA 72 bp | AAGCCAAACGGTGGATGTATGACAGTTTGGGGTTATTaGTTGCTTCGAGCTTTGTCAATTCTGGCAAGTTAT | + |
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Preference number: 6 (lower is better) Translates to: KPNGGCMTVWGY*LLRALSILASY Trigger: ATAACTTGCCAGAATTGACAAAGCTCGAAGCAACCAATAACCCCAAACTGTCATACATCCACCGTTTGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS CAA 72 bp | AAAGCCAAACGGTGGATGTATGACAGTTTGGGGTTATaGGTTGCTTCGAGCTTTGTCAATTCTGGCAAGTTA | + |
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Preference number: 6 (lower is better) Translates to: KAKRWMYDSLGL*VASSFVNSGKL Trigger: TAACTTGCCAGAATTGACAAAGCTCGAAGCAACCAATAACCCCAAACTGTCATACATCCACCGTTTGGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS TCA 72 bp | TCTAGGAAAAGTGTTGTACCAATGTCCATGTTTAGATaGTTAGGGAATGTATCGTGCGATATCATCGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SRKSVVPMSMFR*LGNVSCDIIGR Trigger: CCTCCCGATGATATCGCACGATACATTCCCTAATCATCTAAACATGGACATTGGTACAACACTTTTCCTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS TCA 72 bp | TGTTATGTGGGGGTTGTCGATCTTCATAGTGGCAGATaGCCATTTCAAGTTCGATGTCATGACATTGGAATT | + |
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Preference number: 6 (lower is better) Translates to: CYVGVVDLHSGR*PFQVRCHDIGI Trigger: AATTCCAATGTCATGACATCGAACTTGAAATGGTCATCTGCCACTATGAAGATCGACAACCCCCACATAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS CCA 72 bp | AATCAAACCAGCGGCTATCGATCACTTTCAACTTATTaGAATTCAGGTGCAGCCTCAAGAGATTTTTCAAGC | + |
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Preference number: 6 (lower is better) Translates to: NQTSGYRSLSTY*NSGAASRDFSS Trigger: GCTTGAAAAATCTCTTGAGGCTGCACCTGAATTCCAATAAGTTGAAAGTGATCGATAGCCGCTGGTTTGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS CAA 90 bp | TCAATCTGTATGTTTGCTATCTCCAAGGTGCCCTCACTACTCAGCTaGTATTTGTCTGAAAGAGTTTCCACGGTTATCTTATTTCCAATG | + |
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Preference number: 6 (lower is better) Translates to: SICMFAISKVPSLLS*YLSERVSTVILFPM Trigger: CATTGGAAATAAGATAACCGTGGAAACTCTTTCAGACAAATACAAGCTGAGTAGTGAGGGCACCTTGGAGATAGCAAACATACAGATTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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| CDS TCA 72 bp | TCCAAGATACTAAAATCGAATGAGATTCTGTCTGTTTaGCATATATTTTCAGCACCTGTGCACCATCTAGAA | + |
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Preference number: 6 (lower is better) Translates to: SKILKSNEILSV*HIFSAPVHHLE Trigger: TTCTAGATGGTGCACAGGTGCTGAAAATATATGTCAAACAGACAGAATCTCATTCGATTTTAGTATCTTGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049285.10 |
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