RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRK1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000015133

Ensembl transcript IDs: ENSMUST00000015277.14, ENSMUST00000145954.2

Found 552 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGTTGGCTGTGTGGGAGCACAGGTAGGAGCAGCTTTCTTTTGGGGTaGCCCGTGCCACAGGAAACACAGCCACGAGTCCGTCAGCCAGGC +
Preference number: 1 (lower is better)
Translates to: CWLCGSTGRSSFLLG*PVPQETQPRVRQPG
Trigger: GCCTGGCTGACGGACTCGTGGCTGTGTTTCCTGTGGCACGGGGCACCCCAAAAGAAAGCTGCTCCTACCTGTGCTCCCACACAGCCAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR CCA 90 bp GGACCTGTTGGCTGTGTGGGAGCACAGGTAGGAGCAGCTTTCTTTTaGGGTGCCCCGTGCCACAGGAAACACAGCCACGAGTCCGTCAGC +
Preference number: 1 (lower is better)
Translates to: GPVGCVGAQVGAAFF*GAPCHRKHSHESVS
Trigger: GCTGACGGACTCGTGGCTGTGTTTCCTGTGGCACGGGGCACCCCAAAAGAAAGCTGCTCCTACCTGTGCTCCCACACAGCCAACAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR CCA 90 bp GGAAGGCTTGGAGTGGGGTCACTCTCCCCGGCTCCTGGAAGCCTATaGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCTGTGGCTT +
Preference number: 1 (lower is better)
Translates to: GRLGVGSLSPAPGSL*KRQEEASLNQSLWL
Trigger: AAGCCACAGGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCCGGGGAGAGTGACCCCACTCCAAGCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
3UTR TCA 90 bp CGAGGAGGCCAGGCCCGTTGCTGTACCAGACCTCAGACCCACTGTTaGCCACTTCCATTGCCTTCACTGGGTAAGGGTTCTGCCGTGCAT +
Preference number: 1 (lower is better)
Translates to: RGGQARCCTRPQTHC*PLPLPSLGKGSAVH
Trigger: ATGCACGGCAGAACCCTTACCCAGTGAAGGCAATGGAAGTGGTCAACAGTGGGTCTGAGGTCTGGTACAGCAACGGGCCTGGCCTCCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR GCA 90 bp GGTCCTTCTGGGGTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATaGGATCTCAGTTCCACCAAGCTGGGCCTCACACTCCAGGGATTC +
Preference number: 1 (lower is better)
Translates to: GPSGVSHVQPLPSRR*DLSSTKLGLTLQGF
Trigger: GAATCCCTGGAGTGTGAGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAACCCCAGAAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
3UTR GCA 90 bp GCCCTTCTTAGCAGAAGGTTTAGCAAAGAACCCACTTGTCTTCTGTaGCCTAGGAGGGCTGGAGTTGAGGGGTCAGGCAGCGGCTCGGAC +
Preference number: 1 (lower is better)
Translates to: ALLSRRFSKEPTCLL*PRRAGVEGSGSGSD
Trigger: GTCCGAGCCGCTGCCTGACCCCTCAACTCCAGCCCTCCTAGGGCACAGAAGACAAGTGGGTTCTTTGCTAAACCTTCTGCTAAGAAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
3UTR GCA 90 bp GCCCCGTGCCACAGGAAACACAGCCACGAGTCCGTCAGCCAGGCCTaGCAGCACCAGGAAGGAGTTCTTTTTGATAACAGGTACTGCCAA +
Preference number: 1 (lower is better)
Translates to: APCHRKHSHESVSQA*QHQEGVLFDNRYCQ
Trigger: TTGGCAGTACCTGTTATCAAAAAGAACTCCTTCCTGGTGCTGGCAGGCCTGGCTGACGGACTCGTGGCTGTGTTTCCTGTGGCACGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR GCA 90 bp TTGCCTTCACTGGGTAAGGGTTCTGCCGTGCATCTTCGTCGGGGATaGAGAACTTGGACCTGTTGGCTGTGTGGGAGCACAGGTAGGAGC +
Preference number: 1 (lower is better)
Translates to: LPSLGKGSAVHLRRG*RTWTCWLCGSTGRS
Trigger: GCTCCTACCTGTGCTCCCACACAGCCAACAGGTCCAAGTTCTGCATCCCCGACGAAGATGCACGGCAGAACCCTTACCCAGTGAAGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR TCA 90 bp AGGGAGACCAGGGACCCTTGCACTGGGCTTTCCGGCCATGACTCTTaGAGGAATCCATTCATCTCTGCTATTGGGCAATGCTGCCTGCCC +
Preference number: 1 (lower is better)
Translates to: RETRDPCTGLSGHDS*RNPFISAIGQCCLP
Trigger: GGGCAGGCAGCATTGCCCAATAGCAGAGATGAATGGATTCCTTCAAGAGTCATGGCCGGAAAGCCCAGTGCAAGGGTCCCTGGTCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
3UTR TCA 90 bp TCTCCCCATCCATGGGGCTCAGGTCATGCTCAGTTCTGTCAGAGGTaGCACTGGGCTCCTGCAGCCTGTCTGAGTCTTCATAGTTGGCAG +
Preference number: 1 (lower is better)
Translates to: SPHPWGSGHAQFCQR*HWAPAACLSLHSWQ
Trigger: CTGCCAACTATGAAGACTCAGACAGGCTGCAGGAGCCCAGTGTCACCTCTGACAGAACTGAGCATGACCTGAGCCCCATGGATGGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR GCA 90 bp CAGGCCTGCCAGCACCAGGAAGGAGTTCTTTTTGATAACAGGTACTaGCAAGAAACAGGTGACGACAGCTGGGGTGTCCAGGGCCTGCTG +
Preference number: 1 (lower is better)
Translates to: QACQHQEGVLFDNRY*QETGDDSWGVQGLL
Trigger: CAGCAGGCCCTGGACACCCCAGCTGTCGTCACCTGTTTCTTGGCAGTACCTGTTATCAAAAAGAACTCCTTCCTGGTGCTGGCAGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR GCA 90 bp CCCGTTGCTGTACCAGACCTCAGACCCACTGTTGACCACTTCCATTaGCTTCACTGGGTAAGGGTTCTGCCGTGCATCTTCGTCGGGGAT +
Preference number: 1 (lower is better)
Translates to: PVAVPDLRPTVDHFH*LHWVRVLPCIFVGD
Trigger: ATCCCCGACGAAGATGCACGGCAGAACCCTTACCCAGTGAAGGCAATGGAAGTGGTCAACAGTGGGTCTGAGGTCTGGTACAGCAACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR CCA 90 bp CTGGGTAAGGGTTCTGCCGTGCATCTTCGTCGGGGATGCAGAACTTaGACCTGTTGGCTGTGTGGGAGCACAGGTAGGAGCAGCTTTCTT +
Preference number: 1 (lower is better)
Translates to: LGKGSAVHLRRGCRT*TCWLCGSTGRSSFL
Trigger: AAGAAAGCTGCTCCTACCTGTGCTCCCACACAGCCAACAGGTCCAAGTTCTGCATCCCCGACGAAGATGCACGGCAGAACCCTTACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR CCA 90 bp GGGCACAGAGCTGGTAGGTGGCTGAGTGGTACATCACTAAGCAATTaGCCTTGTCGTCGAGGCACCAGACCATCTCCTCTCCTCTGCAGT +
Preference number: 1 (lower is better)
Translates to: GHRAGRWLSGTSLSN*PCRRGTRPSPLLCS
Trigger: ACTGCAGAGGAGAGGAGATGGTCTGGTGCCTCGACGACAAGGCCAATTGCTTAGTGATGTACCACTCAGCCACCTACCAGCTCTGTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR GCA 90 bp GTTTTCATTTGCAAAGCTGCACACTACGGTGTCCTTTGCCACCACTaGGGCATCCACCAGAACCCCGTGCCGATTGAGCTCTCGGGCTTT +
Preference number: 1 (lower is better)
Translates to: VFICKAAHYGVLCHH*GIHQNPVPIELSGF
Trigger: AAAGCCCGAGAGCTCAATCGGCACGGGGTTCTGGTGGATGCCGCAGTGGTGGCAAAGGACACCGTAGTGTGCAGCTTTGCAAATGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR GCA 90 bp CCACTCTGTGTTTTCATTTGCAAAGCTGCACACTACGGTGTCCTTTaGCACCACTGCGGCATCCACCAGAACCCCGTGCCGATTGAGCTC +
Preference number: 1 (lower is better)
Translates to: PLCVFICKAAHYGVL*HHCGIHQNPVPIEL
Trigger: GAGCTCAATCGGCACGGGGTTCTGGTGGATGCCGCAGTGGTGGCAAAGGACACCGTAGTGTGCAGCTTTGCAAATGAAAACACAGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR GCA 90 bp ACTGTTGACCACTTCCATTGCCTTCACTGGGTAAGGGTTCTGCCGTaGATCTTCGTCGGGGATGCAGAACTTGGACCTGTTGGCTGTGTG +
Preference number: 1 (lower is better)
Translates to: TVDHFHCLHWVRVLP*IFVGDAELGPVGCV
Trigger: CACACAGCCAACAGGTCCAAGTTCTGCATCCCCGACGAAGATGCACGGCAGAACCCTTACCCAGTGAAGGCAATGGAAGTGGTCAACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR GCA 90 bp CCTCAACCAAGACTCTGTAGTGTAATTCCATCTGAGGCCTTCTCTTaGGAGTACAAGCCTCCAGCCGGCCCAGCTCCTCATAGGACTGGT +
Preference number: 1 (lower is better)
Translates to: PQPRLCSVIPSEAFS*EYKPPAGPAPHRTG
Trigger: ACCAGTCCTATGAGGAGCTGGGCCGGCTGGAGGCTTGTACTCGCAAGAGAAGGCCTCAGATGGAATTACACTACAGAGTCTTGGTTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR CCA 90 bp GTACCAGACCTCAGACCCACTGTTGACCACTTCCATTGCCTTCACTaGGTAAGGGTTCTGCCGTGCATCTTCGTCGGGGATGCAGAACTT +
Preference number: 1 (lower is better)
Translates to: VPDLRPTVDHFHCLH*VRVLPCIFVGDAEL
Trigger: AAGTTCTGCATCCCCGACGAAGATGCACGGCAGAACCCTTACCCAGTGAAGGCAATGGAAGTGGTCAACAGTGGGTCTGAGGTCTGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR TCA 90 bp AATGTAAAGGGAGACCAGGGACCCTTGCACTGGGCTTTCCGGCCATaGCTCTTGAAGGAATCCATTCATCTCTGCTATTGGGCAATGCTG +
Preference number: 1 (lower is better)
Translates to: NVKGDQGPLHWAFRP*LLKESIHLCYWAML
Trigger: CAGCATTGCCCAATAGCAGAGATGAATGGATTCCTTCAAGAGTCATGGCCGGAAAGCCCAGTGCAAGGGTCCCTGGTCTCCCTTTACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
3UTR CAA 90 bp TTAGCAAAGAACCCACTTGTCTTCTGTGCCCTAGGAGGGCTGGAGTaGAGGGGTCAGGCAGCGGCTCGGACCTGCTGGCTCCACTCGGAG +
Preference number: 2 (lower is better)
Translates to: LAKNPLVFCALGGLE*RGQAAARTCWLHSE
Trigger: CTCCGAGTGGAGCCAGCAGGTCCGAGCCGCTGCCTGACCCCTCAACTCCAGCCCTCCTAGGGCACAGAAGACAAGTGGGTTCTTTGCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
3UTR-3UTR GCA 90 bp CCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGTGGTGGGTGAGGATCTaGGTGCCCAGCTCCTCGCTG +
Preference number: 2 (lower is better)
Translates to: PCAAFAEQEMRSQFHQAGWWVRI*VPSSSL
Trigger: CAGCGAGGAGCTGGGCACGCAGATCCTCACCCACCA...CCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR CCA 90 bp TTTGCCACCACTGCGGCATCCACCAGAACCCCGTGCCGATTGAGCTCTCGGGCTACGTCTCCCCATCCATaGGGCTCAGGTCATGCTCAG +
Preference number: 2 (lower is better)
Translates to: FATTAASTRTPCRLSSRATSPHP*GSGHAQ
Trigger: CTGAGCATGACCTGAGCCCCATGGATGGGGAGACGT...AGCCCGAGAGCTCAATCGGCACGGGGTTCTGGTGGATGCCGCAGTGGTGGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR CAA 90 bp TGGACCTGTTGGCTGTGTGGGAGCACAGGTAGGAGCAGCTTTCTTTaGGGGTGCCCCGTGCCACAGGAAACACAGCCACGAGTCCGTCAG +
Preference number: 2 (lower is better)
Translates to: WTCWLCGSTGRSSFL*GCPVPQETQPRVRQ
Trigger: CTGACGGACTCGTGGCTGTGTTTCCTGTGGCACGGGGCACCCCAAAAGAAAGCTGCTCCTACCTGTGCTCCCACACAGCCAACAGGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR TCA 90 bp TTTGCCACCACTGCGGCATCCACCAGAACCCCGTGCCGATTGAGCTCTCGGGCTCTCTGGACCTTGAGCTaGCAGCTCAACTTCATCCCG +
Preference number: 2 (lower is better)
Translates to: FATTAASTRTPCRLSSRALWTLS*QLNFIP
Trigger: CGGGATGAAGTTGAGCTGTCAGCTCAAGGTCCAGAG...AGCCCGAGAGCTCAATCGGCACGGGGTTCTGGTGGATGCCGCAGTGGTGGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR GCA 90 bp GATGTCCAGGATGGTGCAGTCAATGACGAGGAGGCCAGGCCCGTTGCTGTACCAGTCTCTGTACTTCCCTaGAGGCACCCTGGCTCCCCA +
Preference number: 2 (lower is better)
Translates to: DVQDGAVNDEEARPVAVPVSVLP*RHPGSP
Trigger: TGGGGAGCCAGGGTGCCTGCAGGGAAGTACAGAGAC...TGGTACAGCAACGGGCCTGGCCTCCTCGTCATTGACTGCACCATCCTGGACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR CCA 90 bp TGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTAAAGACTGGGGTCTTTaGGGGAAGGAGGGCCAGGGG +
Preference number: 2 (lower is better)
Translates to: CAAFAEQEMRSQFHQAGPKDWGL*GKEGQG
Trigger: CCCCTGGCCCTCCTTCCCCCAAAGACCCCAGTCTTT...AGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
3UTR-3UTR CCA 90 bp CCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCTGCCCAGGTCCTTCTaGGGTTTCCCATGTGCAGCC +
Preference number: 2 (lower is better)
Translates to: PCAAFAEQEMRSQFHQAGLPRSF*GFPCAA
Trigger: GGCTGCACATGGGAAACCCCAGAAGGACCTGGGCAG...CCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
3UTR-3UTR TCA 90 bp TGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTCACGTGGCTATCCACACTaGGCTCTGGACCTTGAGCTG +
Preference number: 2 (lower is better)
Translates to: CSLCRAGDAISVPPSWASRGYPH*ALDLEL
Trigger: CAGCTCAAGGTCCAGAGCTCAGTGTGGATAGCCACG...TGAGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR CCA 90 bp GGTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGTGAGCGAGTCCTGGTaGGTGAGGATCTGCGTGCCC +
Preference number: 2 (lower is better)
Translates to: GFPCAAFAEQEMRSQFHQVSESW*VRICVP
Trigger: GGGCACGCAGATCCTCACCCACCAGGACTCGCTCAC...TTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR CAA 90 bp CTGATGTCCAGGATGGTGCAGTCAATGACGAGGAGGCCAGGCCCGTaGCTGTACCAGACCTCAGACCCACTGTTGACCACTTCCATTGCC +
Preference number: 2 (lower is better)
Translates to: LMSRMVQSMTRRPGP*LYQTSDPLLTTSIA
Trigger: GGCAATGGAAGTGGTCAACAGTGGGTCTGAGGTCTGGTACAGCAACGGGCCTGGCCTCCTCGTCATTGACTGCACCATCCTGGACATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR TCA 90 bp CCAGGGACCCTTGCACTGGGCTTTCCGGCCATGACTCTTGAAGGAATCCATTCACAGTTCTGTCAGAGGTaGCACTGGGCTCCTGCAGCC +
Preference number: 2 (lower is better)
Translates to: PGTLALGFPAMTLEGIHSQFCQR*HWAPAA
Trigger: GGCTGCAGGAGCCCAGTGTCACCTCTGACAGAACTG...TGAATGGATTCCTTCAAGAGTCATGGCCGGAAAGCCCAGTGCAAGGGTCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR GCA 90 bp CCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGTCTGAGGCCTTCTCTTaGGAGTACAAGCCTCCAGCC +
Preference number: 2 (lower is better)
Translates to: PMCSLCRAGDAISVPPSWSEAFS*EYKPPA
Trigger: GGCTGGAGGCTTGTACTCGCAAGAGAAGGCCTCAGA...CCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR CCA 90 bp ATTCCATCTGAGGCCTTCTCTTGCGAGTACAAGCCTCCAGCCGGCCCAGCTCCTCACAGGCCCTTTCTCTaGGCCCAGAGATTGGGTTTC +
Preference number: 2 (lower is better)
Translates to: IPSEAFSCEYKPPAGPAPHRPFL*AQRLGF
Trigger: GAAACCCAATCTCTGGGCCCAGAGAAAGGGCCTGTG...AGGAGCTGGGCCGGCTGGAGGCTTGTACTCGCAAGAGAAGGCCTCAGATGGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR CCA 90 bp TGCCACAGGAAACACAGCCACGAGTCCGTCAGCCAGGCCTGCCAGCACCAGGAACACCGTGTAATTCAGTaGGTCTCTGTACTTCCCTGC +
Preference number: 2 (lower is better)
Translates to: CHRKHSHESVSQACQHQEHRVIQ*VSVLPC
Trigger: GCAGGGAAGTACAGAGACCCACTGAATTACACGGTG...TTCCTGGTGCTGGCAGGCCTGGCTGACGGACTCGTGGCTGTGTTTCCTGTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR CCA 90 bp AGGATCTTGGTGGGGTGGGGACGAAGAATAAGAGGACATGGAGCAGTAGTCGGTACAGGTGACGACAGCTaGGGTGTCCAGGGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: RILVGWGRRIRGHGAVVGTGDDS*GVQGLL
Trigger: CAGCAGGCCCTGGACACCCCAGCTGTCGTCACCTGT...ACCGACTACTGCTCCATGTCCTCTTATTCTTCGTCCCCACCCCACCAAGATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR CCA 90 bp CGTCTCCCCATCCATGGGGCTCAGGTCATGCTCAGTTCTGTCAGAGGTGACACTCGGGGATGCAGAACTTaGACCTGTTGGCTGTGTGGG +
Preference number: 2 (lower is better)
Translates to: RLPIHGAQVMLSSVRGDTRGCRT*TCWLCG
Trigger: CCCACACAGCCAACAGGTCCAAGTTCTGCATCCCCG...AGTGTCACCTCTGACAGAACTGAGCATGACCTGAGCCCCATGGATGGGGAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR TCA 90 bp GGGGTCCCAGCCCTCCTCCCACCTTACCCTGAACTGCTCCTCAACCAAGACTCTTTTCCCCACAGAACCTaGGAACTCCCAAACTACCAG +
Preference number: 2 (lower is better)
Translates to: GVPALLPPYPELLLNQDSFPHRT*ELPNYQ
Trigger: CTGGTAGTTTGGGAGTTCTCAGGTTCTGTGGGGAAA...AGAGTCTTGGTTGAGGAGCAGTTCAGGGTAAGGTGGGAGGAGGGCTGGGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
3UTR-3UTR GCA 90 bp TCTGAGGCCTTCTCTTGCGAGTACAAGCCTCCAGCCGGCCCAGCTCCTCATAGGAGGTGGTTTTGTGACTaGCTGGGGTTTCTAGGACTG +
Preference number: 2 (lower is better)
Translates to: SEAFSCEYKPPAGPAPHRRWFCD*LGFLGL
Trigger: CAGTCCTAGAAACCCCAGGCAGTCACAAAACCACCT...CCTATGAGGAGCTGGGCCGGCTGGAGGCTTGTACTCGCAAGAGAAGGCCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR CCA 90 bp TACAAGCCTCCAGCCGGCCCAGCTCCTCATAGGACTGGTAGAAGATGTCAAACTACAGCCTGCAGGTGCTaGCTGAACGTCTCCCCATCC +
Preference number: 2 (lower is better)
Translates to: YKPPAGPAPHRTGRRCQTTACRC*LNVSPS
Trigger: GGATGGGGAGACGTTCAGCCAGCACCTGCAGGCTGT...AGTTTGACATCTTCTACCAGTCCTATGAGGAGCTGGGCCGGCTGGAGGCTTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR TCA 90 bp CGTCTCCCCATCCATGGGGCTCAGGTCATGCTCAGTTCTGTCAGAGGTGACACTGGCCCTTCTCTGTGTTaGCCACCGTGTAATTCAGTG +
Preference number: 2 (lower is better)
Translates to: RLPIHGAQVMLSSVRGDTGPSLC*PPCNSV
Trigger: CACTGAATTACACGGTGGTCAACACAGAGAAGGGCC...AGTGTCACCTCTGACAGAACTGAGCATGACCTGAGCCCCATGGATGGGGAGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR GCA 90 bp CTATTGGGCAATGCTGCCTGCCCAGGTCCTTCTGGGGTTTCCCATGTGCAGCCTCACCTTACCCTGAACTaGTCCTCAACCAAGACTCTG +
Preference number: 2 (lower is better)
Translates to: LLGNAACPGPSGVSHVQPHLTLN*SSTKTL
Trigger: CAGAGTCTTGGTTGAGGAGCAGTTCAGGGTAAGGTG...AGGCTGCACATGGGAAACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
3UTR-3UTR CCA 90 bp CCAGGGACCCTTGCACTGGGCTTTCCGGCCATGACTCTTGAAGGAATCCATTCAGGCTCGGCAAAGATGTaGGTGTGTGTGCACACGTGT +
Preference number: 2 (lower is better)
Translates to: PGTLALGFPAMTLEGIHSGSAKM*VCVHTC
Trigger: ACACGTGTGCACACACACCCACATCTTTGCCGAGCC...TGAATGGATTCCTTCAAGAGTCATGGCCGGAAAGCCCAGTGCAAGGGTCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
3UTR-3UTR CCA 90 bp CCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCACAGAGCTGGTAGGTaGCTGAGTGGTACATCACTA +
Preference number: 2 (lower is better)
Translates to: PCAAFAEQEMRSQFHQAGHRAGR*LSGTSL
Trigger: TAGTGATGTACCACTCAGCCACCTACCAGCTCTGTG...CCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR CCA 90 bp CCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGAGGATCTTGGTGGGGTaGGGACGAAGAATAAGAGGA +
Preference number: 2 (lower is better)
Translates to: PCAAFAEQEMRSQFHQAGRILVG*GRRIRG
Trigger: TCCTCTTATTCTTCGTCCCCACCCCACCAAGATCCT...CCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR TCA 90 bp GGTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAACCTTGTGAAACAGGCTaGAAGACTGGGGTCTTTGGG +
Preference number: 2 (lower is better)
Translates to: GFPCAAFAEQEMRSQFHQPCETG*KTGVFG
Trigger: CCCAAAGACCCCAGTCTTTCAGCCTGTTTCACAAGG...TTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
3UTR-3UTR TCA 90 bp GCACCTGAATCCTTCTCCAGGCCGATGACAATGATATCTCCTCCATGTCTAGGACACTGGAATAGCTGGTaGGGGAGCTGGGCAGACTGG +
Preference number: 2 (lower is better)
Translates to: APESFSRPMTMISPPCLGHWNSW*GSWADW
Trigger: CCAGTCTGCCCAGCTCCCTCACCAGCTATTCCAGTG...TCCTAGACATGGAGGAGATATCATTGTCATCGGCCTGGAGAAGGATTCAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR GCA 90 bp CCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGAACAAACAGGGCTTGTaGTCCAGCTGTGTCCAAGTT +
Preference number: 2 (lower is better)
Translates to: PCAAFAEQEMRSQFHQAGNKQGL*SSCVQV
Trigger: AACTTGGACACAGCTGGAGCACAAGCCCTGTTTGTT...CCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
3UTR-3UTR GCA 90 bp CCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGGTTGACCACTTCCATTaGCTTCACTGGGTAAGGGTT +
Preference number: 2 (lower is better)
Translates to: PCAAFAEQEMRSQFHQAGVDHFH*LHWVRV
Trigger: AACCCTTACCCAGTGAAGGCAATGGAAGTGGTCAAC...CCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR CCA 90 bp GCACCTGAATCCTTCTCCAGGCCGATGACAATGATATCTCCTCCATGTCTAGGACTGCCCAGGTCCTTCTaGGGTTTCCCATGTGCAGCC +
Preference number: 2 (lower is better)
Translates to: APESFSRPMTMISPPCLGLPRSF*GFPCAA
Trigger: GGCTGCACATGGGAAACCCCAGAAGGACCTGGGCAG...TCCTAGACATGGAGGAGATATCATTGTCATCGGCCTGGAGAAGGATTCAGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR GCA 90 bp AGACTCTGTAGTGTAATTCCATCTGAGGCCTTCTCTTGCGAGTACAAGCCTCCATCCGTCAGCCAGGCCTaGCAGCACCAGGAAGGAGTT +
Preference number: 2 (lower is better)
Translates to: RLCSVIPSEAFSCEYKPPSVSQA*QHQEGV
Trigger: AACTCCTTCCTGGTGCTGGCAGGCCTGGCTGACGGA...TGGAGGCTTGTACTCGCAAGAGAAGGCCTCAGATGGAATTACACTACAGAGTCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR GCA 90 bp TACAAGCCTCCAGCCGGCCCAGCTCCTCATAGGACTGGTAGAAGATGTCAAACTCCATCTCCTCTCCTCTaGAGTCTGAGCTGCACACAA +
Preference number: 2 (lower is better)
Translates to: YKPPAGPAPHRTGRRCQTPSPLL*SLSCTQ
Trigger: TTGTGTGCAGCTCAGACTGCAGAGGAGAGGAGATGG...AGTTTGACATCTTCTACCAGTCCTATGAGGAGCTGGGCCGGCTGGAGGCTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR GCA 90 bp GCACCTGAATCCTTCTCCAGGCCGATGACAATGATATCTCCTCCATGTCTAGGATTCACAGCCTGCAGGTaGTGGCTGAACGTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: APESFSRPMTMISPPCLGFTACR*WLNVSP
Trigger: TGGGGAGACGTTCAGCCAGCACCTGCAGGCTGTGAA...TCCTAGACATGGAGGAGATATCATTGTCATCGGCCTGGAGAAGGATTCAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR CCA 90 bp AGGTGGCTGAGTGGTACATCACTAAGCAATTGGCCTTGTCGTCGAGGCACCAGAAGAACTTGGACCTGTTaGCTGTGTGGGAGCACAGGT +
Preference number: 2 (lower is better)
Translates to: RWLSGTSLSNWPCRRGTRRTWTC*LCGSTG
Trigger: ACCTGTGCTCCCACACAGCCAACAGGTCCAAGTTCT...TCTGGTGCCTCGACGACAAGGCCAATTGCTTAGTGATGTACCACTCAGCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR TCA 90 bp TTTGTCGGGGGAGAAGAATGTAAAGGGAGACCAGGGACCCTTGCACTGGGCTTTGGATTCAGAGCCTTGTaGAACAGGCTGAAAGACTGG +
Preference number: 2 (lower is better)
Translates to: FVGGEECKGRPGTLALGFGFRAL*NRLKDW
Trigger: CCAGTCTTTCAGCCTGTTTCACAAGGCTCTGAATCC...AAAGCCCAGTGCAAGGGTCCCTGGTCTCCCTTTACATTCTTCTCCCCCGACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
3UTR-3UTR GCA 90 bp TGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTCATTTGATAACAGGTACTaGCAAGAAACAGGTGACGAC +
Preference number: 2 (lower is better)
Translates to: CSLCRAGDAISVPPSWASFDNRY*QETGDD
Trigger: GTCGTCACCTGTTTCTTGGCAGTACCTGTTATCAAA...TGAGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR CCA 90 bp TTTGTCGGGGGAGAAGAATGTAAAGGGAGACCAGGGACCCTTGCACTGGGCTTTATTCATCTCTGCTATTaGGCAATGCTGCCTGCCCAG +
Preference number: 2 (lower is better)
Translates to: FVGGEECKGRPGTLALGFIHLCY*AMLPAQ
Trigger: CTGGGCAGGCAGCATTGCCCAATAGCAGAGATGAAT...AAAGCCCAGTGCAAGGGTCCCTGGTCTCCCTTTACATTCTTCTCCCCCGACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
3UTR-3UTR GCA 90 bp GCACCTGAATCCTTCTCCAGGCCGATGACAATGATATCTCCTCCATGTCTAGGACATCTTCGTCGGGGATaGAGAACTTGGACCTGTTGG +
Preference number: 2 (lower is better)
Translates to: APESFSRPMTMISPPCLGHLRRG*RTWTCW
Trigger: CCAACAGGTCCAAGTTCTGCATCCCCGACGAAGATG...TCCTAGACATGGAGGAGATATCATTGTCATCGGCCTGGAGAAGGATTCAGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR GCA 90 bp AAACAAGATTATGATGTGCAAACAAACAGGGCTTGTGCTCCAGCTGTGTCCAAGTTGGGCAATGCTGCCTaGCCAGGTCCTTCTGGGGTT +
Preference number: 2 (lower is better)
Translates to: KQDYDVQTNRACAPAVSKLGNAA*PGPSGV
Trigger: AACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAA...CTTGGACACAGCTGGAGCACAAGCCCTGTTTGTTTGCACATCATAATCTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
3UTR-3UTR GCA 90 bp TGTGCTCCAGCTGTGTCCAAGTTTATTTTACCAAGTCATAAACACAGGCCCTTTGAGACCAGGGACCCTTaGACTGGGCTTTCCGGCCAT +
Preference number: 2 (lower is better)
Translates to: CAPAVSKFILPSHKHRPFETRDP*TGLSGH
Trigger: ATGGCCGGAAAGCCCAGTGCAAGGGTCCCTGGTCTC...AAAGGGCCTGTGTTTATGACTTGGTAAAATAAACTTGGACACAGCTGGAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
3UTR-3UTR CCA 90 bp CAACTTGCCTTTTCTTCATCTGCTGTCCACGTGGGCAGTAAATGTTTGGCAAATCCCTGTGGCTTCCCATaGGCTGGTAACTTTCCCCAC +
Preference number: 2 (lower is better)
Translates to: QLAFSSSAVHVGSKCLANPCGFP*AGNFPH
Trigger: GTGGGGAAAGTTACCAGCCCATGGGAAGCCACAGGG...ATTTGCCAAACATTTACTGCCCACGTGGACAGCAGATGAAGAAAAGGCAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
3UTR-3UTR GCA 90 bp AAACAAGATTATGATGTGCAAACAAACAGGGCTTGTGCTCCAGCTGTGTCCAAGCACCTTACCCTGAACTaGTCCTCAACCAAGACTCTG +
Preference number: 2 (lower is better)
Translates to: KQDYDVQTNRACAPAVSKHLTLN*SSTKTL
Trigger: CAGAGTCTTGGTTGAGGAGCAGTTCAGGGTAAGGTG...CTTGGACACAGCTGGAGCACAAGCCCTGTTTGTTTGCACATCATAATCTTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
3UTR-3UTR TCA 90 bp AATTCTAGAAAAGGTTCAGTAACCCGAGCCAAATACAGTCTCACATTCAAACGTGGATTCAGAGCCTTGTaGAACAGGCTGAAAGACTGG +
Preference number: 2 (lower is better)
Translates to: NSRKGSVTRAKYSLTFKRGFRAL*NRLKDW
Trigger: CCAGTCTTTCAGCCTGTTTCACAAGGCTCTGAATCC...ACGTTTGAATGTGAGACTGTATTTGGCTCGGGTTACTGAACCTTTTCTAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
3UTR TCA 72 bp CCTCTCCTCTGCAGTCTGAGCTGCACACAAGTGACGTaGCCATGGACGGAGCTGCGTAGGGCTCCAGCCGCC +
Preference number: 3 (lower is better)
Translates to: PLLCSLSCTQVT*PWTELRRAPAA
Trigger: GGCGGCTGGAGCCCTACGCAGCTCCGTCCATGGTCACGTCACTTGTGTGCAGCTCAGACTGCAGAGGAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR CCA 72 bp GGGAAGGCTTGGAGTGGGGTCACTCTCCCCGGCTCCTaGAAGCCTATGGAAGAGGCAAGAGGAGGCCTCTCT +
Preference number: 3 (lower is better)
Translates to: GKAWSGVTLPGS*KPMEEARGGLS
Trigger: AGAGAGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCCGGGGAGAGTGACCCCACTCCAAGCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
3UTR CCA 72 bp GGAGTGGGGTCACTCTCCCCGGCTCCTGGAAGCCTATaGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCC +
Preference number: 3 (lower is better)
Translates to: GVGSLSPAPGSL*KRQEEASLNQS
Trigger: GGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCCGGGGAGAGTGACCCCACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
3UTR CCA 72 bp GGCTGTGTGGGAGCACAGGTAGGAGCAGCTTTCTTTTaGGGTGCCCCGTGCCACAGGAAACACAGCCACGAG +
Preference number: 3 (lower is better)
Translates to: GCVGAQVGAAFF*GAPCHRKHSHE
Trigger: CTCGTGGCTGTGTTTCCTGTGGCACGGGGCACCCCAAAAGAAAGCTGCTCCTACCTGTGCTCCCACACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR CAA 90 bp CTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCTGTGGCTTCCCATGCTAGGAGGGCTGGAGTaGAGGGGTCAGGCAGCGGCT +
Preference number: 3 (lower is better)
Translates to: LWKRQEEASLNQSLWLPMLGGLE*RGQAAA
Trigger: AGCCGCTGCCTGACCCCTCAACTCCAGCCCTCCTAG...CATGGGAAGCCACAGGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
3UTR-3UTR CAA 90 bp CGAGTCCTGGTGGGTGAGGATCTGCGTGCCCAGCTCCTCGCTGTACATGATGCTCAGAACTTGGACCTGTaGGCTGTGTGGGAGCACAGG +
Preference number: 3 (lower is better)
Translates to: RVLVGEDLRAQLLAVHDAQNLDL*AVWEHR
Trigger: CCTGTGCTCCCACACAGCCAACAGGTCCAAGTTCTG...AGCATCATGTACAGCGAGGAGCTGGGCACGCAGATCCTCACCCACCAGGACTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR GCA 72 bp GGGGTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATaGGATCTCAGTTCCACCAAGCTGGGCCTCACACTC +
Preference number: 3 (lower is better)
Translates to: GVSHVQPLPSRR*DLSSTKLGLTL
Trigger: GAGTGTGAGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
3UTR GCA 72 bp GCCCAGGTCCTTCTGGGGTTTCCCATGTGCAGCCTTTaGCGAGCAGGAGATGCGATCTCAGTTCCACCAAGC +
Preference number: 3 (lower is better)
Translates to: AQVLLGFPMCSL*RAGDAISVPPS
Trigger: GCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAACCCCAGAAGGACCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
3UTR GCA 72 bp TGTGGGAGCACAGGTAGGAGCAGCTTTCTTTTGGGGTaGCCCGTGCCACAGGAAACACAGCCACGAGTCCGT +
Preference number: 3 (lower is better)
Translates to: CGSTGRSSFLLG*PVPQETQPRVR
Trigger: ACGGACTCGTGGCTGTGTTTCCTGTGGCACGGGGCACCCCAAAAGAAAGCTGCTCCTACCTGTGCTCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR GCA 72 bp AGGTCTTTGACAGCAAGCACCTTCACAGCCTGCAGGTaGTGGCTGAACGTCTCCCCATCCATGGGGCTCAGG +
Preference number: 3 (lower is better)
Translates to: RSLTASTFTACR*WLNVSPSMGLR
Trigger: CCTGAGCCCCATGGATGGGGAGACGTTCAGCCAGCACCTGCAGGCTGTGAAGGTGCTTGCTGTCAAAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR CCA 72 bp TCTGCTATTGGGCAATGCTGCCTGCCCAGGTCCTTCTaGGGTTTCCCATGTGCAGCCTTTGCCGAGCAGGAG +
Preference number: 3 (lower is better)
Translates to: SAIGQCCLPRSF*GFPCAAFAEQE
Trigger: CTCCTGCTCGGCAAAGGCTGCACATGGGAAACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAATAGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
3UTR CCA 72 bp GGTTCTGCCGTGCATCTTCGTCGGGGATGCAGAACTTaGACCTGTTGGCTGTGTGGGAGCACAGGTAGGAGC +
Preference number: 3 (lower is better)
Translates to: GSAVHLRRGCRT*TCWLCGSTGRS
Trigger: GCTCCTACCTGTGCTCCCACACAGCCAACAGGTCCAAGTTCTGCATCCCCGACGAAGATGCACGGCAGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR CAA 90 bp ATTCCATCTGAGGCCTTCTCTTGCGAGTACAAGCCTCCAGCCGGCCCAGCTCCTTCGGGGATGCAGAACTaGGACCTGTTGGCTGTGTGG +
Preference number: 3 (lower is better)
Translates to: IPSEAFSCEYKPPAGPAPSGMQN*DLLAVW
Trigger: CCACACAGCCAACAGGTCCAAGTTCTGCATCCCCGA...AGGAGCTGGGCCGGCTGGAGGCTTGTACTCGCAAGAGAAGGCCTCAGATGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR TCA 72 bp TCCGTGGCTATCCACACTGAGCTCTGGACCTTGAGCTaGCAGCTCAACTTCATCCCGGGGCAGGTCATCCTC +
Preference number: 3 (lower is better)
Translates to: SVAIHTELWTLS*QLNFIPGQVIL
Trigger: GAGGATGACCTGCCCCGGGATGAAGTTGAGCTGTCAGCTCAAGGTCCAGAGCTCAGTGTGGATAGCCACGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR GCA 72 bp ATGCTGCCTGCCCAGGTCCTTCTGGGGTTTCCCATGTaGAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTT +
Preference number: 3 (lower is better)
Translates to: MLPAQVLLGFPM*SLCRAGDAISV
Trigger: AACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAACCCCAGAAGGACCTGGGCAGGCAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
3UTR GCA 72 bp AAGAAACAGGTGACGACAGCTGGGGTGTCCAGGGCCTaGTGGGGCACGCTTAATGGGCACATACCCTTAAGG +
Preference number: 3 (lower is better)
Translates to: KKQVTTAGVSRA*WGTLNGHIPLR
Trigger: CCTTAAGGGTATGTGCCCATTAAGCGTGCCCCAGCAGGCCCTGGACACCCCAGCTGTCGTCACCTGTTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR TCA 72 bp AGGGCCAGGGGTCCCAGCCCTCCTCCCACCTTACCCTaGACTGCTCCTCAACCAAGACTCTGTAGTGTAATT +
Preference number: 3 (lower is better)
Translates to: RARGPSPPPTLP*TAPQPRLCSVI
Trigger: AATTACACTACAGAGTCTTGGTTGAGGAGCAGTTCAGGGTAAGGTGGGAGGAGGGCTGGGACCCCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
3UTR TCA 72 bp TCACACTCCAGGGATTCAGAGCCTTGTGAAACAGGCTaGAAGACTGGGGTCTTTGGGGGAAGGAGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: SHSRDSEPCETG*KTGVFGGRRAR
Trigger: CCTGGCCCTCCTTCCCCCAAAGACCCCAGTCTTTCAGCCTGTTTCACAAGGCTCTGAATCCCTGGAGTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
3UTR GCA 72 bp CAAATGAGGTCTTTGACAGCAAGCACCTTCACAGCCTaGAGGTGCTGGCTGAACGTCTCCCCATCCATGGGG +
Preference number: 3 (lower is better)
Translates to: QMRSLTASTFTA*RCWLNVSPSMG
Trigger: CCCCATGGATGGGGAGACGTTCAGCCAGCACCTGCAGGCTGTGAAGGTGCTTGCTGTCAAAGACCTCATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR GCA 72 bp GTTTTCATTTGCAAAGCTGCACACTACGGTGTCCTTTaGCACCACTGCGGCATCCACCAGAACCCCGTGCCG +
Preference number: 3 (lower is better)
Translates to: VFICKAAHYGVL*HHCGIHQNPVP
Trigger: CGGCACGGGGTTCTGGTGGATGCCGCAGTGGTGGCAAAGGACACCGTAGTGTGCAGCTTTGCAAATGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR CCA 72 bp TGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTaGGCCTCACACTCCAGGGATTCAGAGCCTTGTGAA +
Preference number: 3 (lower is better)
Translates to: CRAGDAISVPPS*ASHSRDSEPCE
Trigger: TTCACAAGGCTCTGAATCCCTGGAGTGTGAGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
3UTR CCA 72 bp AAGGCCCTTCTCTGTGTTGACCACCGTGTAATTCAGTaGGTCTCTGTACTTCCCTGCAGGCACCCTGGCTCC +
Preference number: 3 (lower is better)
Translates to: KALLCVDHRVIQ*VSVLPCRHPGS
Trigger: GGAGCCAGGGTGCCTGCAGGGAAGTACAGAGACCCACTGAATTACACGGTGGTCAACACAGAGAAGGGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR CAA 90 bp CCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGTACATCACTAAGCAATaGGCCTTGTCGTCGAGGCAC +
Preference number: 3 (lower is better)
Translates to: PMCSLCRAGDAISVPPSWYITKQ*ALSSRH
Trigger: GTGCCTCGACGACAAGGCCAATTGCTTAGTGATGTA...CCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR CAA 90 bp CCAGGGACCCTTGCACTGGGCTTTCCGGCCATGACTCTTGAAGGAATCCATTCACTTCCACAGGCCCCTTaGAGGTGGTTTTGTGACTGC +
Preference number: 3 (lower is better)
Translates to: PGTLALGFPAMTLEGIHSLPQAP*RWFCDC
Trigger: GCAGTCACAAAACCACCTCAAAGGGGCCTGTGGAAG...TGAATGGATTCCTTCAAGAGTCATGGCCGGAAAGCCCAGTGCAAGGGTCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR TCA 72 bp AAGCTGGGCCTCACACTCCAGGGATTCAGAGCCTTGTaGAACAGGCTGAAAGACTGGGGTCTTTGGGGGAAG +
Preference number: 3 (lower is better)
Translates to: KLGLTLQGFRAL*NRLKDWGLWGK
Trigger: CTTCCCCCAAAGACCCCAGTCTTTCAGCCTGTTTCACAAGGCTCTGAATCCCTGGAGTGTGAGGCCCAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
3UTR GCA 72 bp CACAGGAAACACAGCCACGAGTCCGTCAGCCAGGCCTaGCAGCACCAGGAAGGAGTTCTTTTTGATAACAGG +
Preference number: 3 (lower is better)
Translates to: HRKHSHESVSQA*QHQEGVLFDNR
Trigger: CCTGTTATCAAAAAGAACTCCTTCCTGGTGCTGGCAGGCCTGGCTGACGGACTCGTGGCTGTGTTTCCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR CCA 72 bp GTGCATCTTCGTCGGGGATGCAGAACTTGGACCTGTTaGCTGTGTGGGAGCACAGGTAGGAGCAGCTTTCTT +
Preference number: 3 (lower is better)
Translates to: VHLRRGCRTWTC*LCGSTGRSSFL
Trigger: AAGAAAGCTGCTCCTACCTGTGCTCCCACACAGCCAACAGGTCCAAGTTCTGCATCCCCGACGAAGATGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR CCA 72 bp CTCAGACCCACTGTTGACCACTTCCATTGCCTTCACTaGGTAAGGGTTCTGCCGTGCATCTTCGTCGGGGAT +
Preference number: 3 (lower is better)
Translates to: LRPTVDHFHCLH*VRVLPCIFVGD
Trigger: ATCCCCGACGAAGATGCACGGCAGAACCCTTACCCAGTGAAGGCAATGGAAGTGGTCAACAGTGGGTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR CCA 72 bp GCTGGTAGGTGGCTGAGTGGTACATCACTAAGCAATTaGCCTTGTCGTCGAGGCACCAGACCATCTCCTCTC +
Preference number: 3 (lower is better)
Translates to: AGRWLSGTSLSN*PCRRGTRPSPL
Trigger: GAGAGGAGATGGTCTGGTGCCTCGACGACAAGGCCAATTGCTTAGTGATGTACCACTCAGCCACCTACCAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR CAA 90 bp TGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTCAGGTTTCTCCTTCCTTTaGTCGGGGGAGAAGAATGTA +
Preference number: 3 (lower is better)
Translates to: CSLCRAGDAISVPPSWASGFSFL*SGEKNV
Trigger: TACATTCTTCTCCCCCGACAAAAGGAAGGAGAAACC...TGAGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
3UTR-3UTR CAA 90 bp AGGATCTTGGTGGGGTGGGGACGAAGAATAAGAGGACATGGAGCAGTAGTCGGTACTAAGCAATTGGCCTaGTCGTCGAGGCACCAGACC +
Preference number: 3 (lower is better)
Translates to: RILVGWGRRIRGHGAVVGTKQLA*SSRHQT
Trigger: GGTCTGGTGCCTCGACGACAAGGCCAATTGCTTAGT...ACCGACTACTGCTCCATGTCCTCTTATTCTTCGTCCCCACCCCACCAAGATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR CAA 90 bp CCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGACCCAAATGAGGTCTTaGACAGCAAGCACCTTCACA +
Preference number: 3 (lower is better)
Translates to: PMCSLCRAGDAISVPPSWTQMRS*TASTFT
Trigger: TGTGAAGGTGCTTGCTGTCAAAGACCTCATTTGGGT...CCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR GCA 72 bp CACTTCCATTGCCTTCACTGGGTAAGGGTTCTGCCGTaGATCTTCGTCGGGGATGCAGAACTTGGACCTGTT +
Preference number: 3 (lower is better)
Translates to: HFHCLHWVRVLP*IFVGDAELGPV
Trigger: AACAGGTCCAAGTTCTGCATCCCCGACGAAGATGCACGGCAGAACCCTTACCCAGTGAAGGCAATGGAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR GCA 72 bp GTACCAGACCTCAGACCCACTGTTGACCACTTCCATTaGCTTCACTGGGTAAGGGTTCTGCCGTGCATCTTC +
Preference number: 3 (lower is better)
Translates to: VPDLRPTVDHFH*LHWVRVLPCIF
Trigger: GAAGATGCACGGCAGAACCCTTACCCAGTGAAGGCAATGGAAGTGGTCAACAGTGGGTCTGAGGTCTGGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR GCA 72 bp AGACTCTGTAGTGTAATTCCATCTGAGGCCTTCTCTTaGGAGTACAAGCCTCCAGCCGGCCCAGCTCCTCAT +
Preference number: 3 (lower is better)
Translates to: RLCSVIPSEAFS*EYKPPAGPAPH
Trigger: ATGAGGAGCTGGGCCGGCTGGAGGCTTGTACTCGCAAGAGAAGGCCTCAGATGGAATTACACTACAGAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR GCA 72 bp CAGCACCAGGAAGGAGTTCTTTTTGATAACAGGTACTaGCAAGAAACAGGTGACGACAGCTGGGGTGTCCAG +
Preference number: 3 (lower is better)
Translates to: QHQEGVLFDNRY*QETGDDSWGVQ
Trigger: CTGGACACCCCAGCTGTCGTCACCTGTTTCTTGGCAGTACCTGTTATCAAAAAGAACTCCTTCCTGGTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR-3UTR CAA 90 bp GCACCTGAATCCTTCTCCAGGCCGATGACAATGATATCTCCTCCATGTCTAGGAAGGAAGGAGTTCTTTTaGATAACAGGTACTGCCAAG +
Preference number: 3 (lower is better)
Translates to: APESFSRPMTMISPPCLGRKEFF*ITGTAK
Trigger: CTTGGCAGTACCTGTTATCAAAAAGAACTCCTTCCT...TCCTAGACATGGAGGAGATATCATTGTCATCGGCCTGGAGAAGGATTCAGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
3UTR CCA 72 bp GTTAACAACTTGCCTTTTCTTCATCTGCTGTCCACGTaGGCAGTAAATGTTTGGCAAATACATAATTCAGTA +
Preference number: 3 (lower is better)
Translates to: VNNLPFLHLLST*AVNVWQIHNSV
Trigger: TACTGAATTATGTATTTGCCAAACATTTACTGCCCACGTGGACAGCAGATGAAGAAAAGGCAAGTTGTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp TGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTCACACTCCAGGCCAGGAGTGTGGACTTaGCCTGGCGCGGGGGACCCA +
Preference number: 4 (lower is better)
Translates to: CRAGDAISVPPSWASHSRPGVWT*PGAGDP
Trigger: TGGGTCCCCCGCGCCAGGGCAAGTCCACACTCCTGG...CCTGGAGTGTGAGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
3UTR CAA 72 bp AACCCACTTGTCTTCTGTGCCCTAGGAGGGCTGGAGTaGAGGGGTCAGGCAGCGGCTCGGACCTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: NPLVFCALGGLE*RGQAAARTCWL
Trigger: GAGCCAGCAGGTCCGAGCCGCTGCCTGACCCCTCAACTCCAGCCCTCCTAGGGCACAGAAGACAAGTGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp CCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTGGTAACCTGGGGTaGCCTCCACACCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: PCAAFAEQEMRSQFHQAGPGNLG*PPHPGP
Trigger: GGGCCCTGGGTGTGGAGGGCACCCCAGGTTACCAGG...CCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp TGCCACAGGAAACACAGCCACGAGTCCGTCAGCCAGGCCTGCCAGCACCAGGAAACACGATGCGAGGCCTaGTCTCTGGGGCCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: CHRKHSHESVSQACQHQETRCEA*SLGPGN
Trigger: GTTACCAGGCCCCAGAGATCAGGCCTCGCATCGTGT...TTCCTGGTGCTGGCAGGCCTGGCTGACGGACTCGTGGCTGTGTTTCCTGTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS-3UTR GCA 90 bp TGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTCACGTGGGCTGCCGCGATaGTCAGCAGCTGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: CSLCRAGDAISVPPSWASRGLPR*SAAGPS
Trigger: AGAAGGGCCAGCTGCTGAGCATCGCGGCAGCCCACG...TGAGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp CTATTGGGCAATGCTGCCTGCCCAGGTCCTTCTGGGGTTTCCCATGTGCAGCCTGACCATGGACGGAGCTaGGTAGGGCTCCAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: LLGNAACPGPSGVSHVQPDHGRS*VGLQPP
Trigger: AGGCGGCTGGAGCCCTACGCAGCTCCGTCCATGGTC...AGGCTGCACATGGGAAACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp TGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTCACACTCCAGGTGGTGGGTGAGGATCTaGGTGCCCAGCTCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: CRAGDAISVPPSWASHSRWWVRI*VPSSSL
Trigger: CAGCGAGGAGCTGGGCACGCAGATCCTCACCCACCA...CCTGGAGTGTGAGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp CGGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCTCCAGGTGCCCTCGCTaGCAAGCCAGGGCCAGCATC +
Preference number: 4 (lower is better)
Translates to: RLLEAYGRGKRRPLSTNPSRCPR*QARASI
Trigger: GATGCTGGCCCTGGCTTGCCAGCGAGGGCACCTGGA...GGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp TGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTCAGGGTGCCGCATGCTGTaGGTGTCCAGCCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: CSLCRAGDAISVPPSWASGCRML*VSSPGL
Trigger: CAAGCCTGGGCTGGACACCCACAGCATGCGGCACCC...TGAGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp TCTGAGGCCTTCTCTTGCGAGTACAAGCCTCCAGCCGGCCCAGCTCCTCATAGGCGGCTGCCCCAGAACTaGGCGGATGCCCTTGGACAA +
Preference number: 4 (lower is better)
Translates to: SEAFSCEYKPPAGPAPHRRLPQN*ADALGQ
Trigger: TTGTCCAAGGGCATCCGCCCAGTTCTGGGGCAGCCG...CCTATGAGGAGCTGGGCCGGCTGGAGGCTTGTACTCGCAAGAGAAGGCCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp TCCCCGGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATGCAGCCGATGGAACTaGACTTCCTCCGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SPAPGSLWKRQEEASLNQCSRWN*TSSGCP
Trigger: GGGGCAGCCGGAGGAAGTTCAGTTCCATCGGCTGCA...TTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp CCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCTCCAGCCGCCTGCTaGTGTCCAGGATGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: PMCSLCRAGDAISVPPSWAPAAC*CPGWCS
Trigger: ACTGCACCATCCTGGACATCAGCAGGCGGCTGGAGC...CCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp TGCCCAGGTCCTTCTGGGGTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATGCTCCGTCAGCCAGGCCTaGCAGCACCAGGAAGGAGTT +
Preference number: 4 (lower is better)
Translates to: CPGPSGVSHVQPLPSRRCSVSQA*QHQEGV
Trigger: AACTCCTTCCTGGTGCTGGCAGGCCTGGCTGACGGA...GCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAACCCCAGAAGGACCTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp CGGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCGGAGGCCAGGCCCGTTaGTGTACCAGACCTCAGACC +
Preference number: 4 (lower is better)
Translates to: RLLEAYGRGKRRPLSTNPGGQAR*CTRPQT
Trigger: GGTCTGAGGTCTGGTACAGCAACGGGCCTGGCCTCC...GGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp CCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGCTGGGTTGTCATCGGTaGGCTCCGTCGGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PMCSLCRAGDAISVPPSWLGCHR*APSAAP
Trigger: TGGAGCTGCCGACGGAGCCCACCGATGACAACCCAG...CCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp TGCCACAGGAAACACAGCCACGAGTCCGTCAGCCAGGCCTGCCAGCACCAGGAACTCCTGAAGTGGTACTaGGAGGTCTGGGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: CHRKHSHESVSQACQHQELLKWY*EVWVSG
Trigger: CCCAGACACCCAGACCTCCCAGTACCACTTCAGGAG...TTCCTGGTGCTGGCAGGCCTGGCTGACGGACTCGTGGCTGTGTTTCCTGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS-3UTR CCA 90 bp CTATTGGGCAATGCTGCCTGCCCAGGTCCTTCTGGGGTTTCCCATGTGCAGCCTACAGGTGACGACAGCTaGGGTGTCCAGGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LLGNAACPGPSGVSHVQPTGDDS*GVQGLL
Trigger: CAGCAGGCCCTGGACACCCCAGCTGTCGTCACCTGT...AGGCTGCACATGGGAAACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp CCAGCCCTCCTCCCACCTTACCCTGAACTGCTCCTCAACCAAGACTCTGTAGTGAGCCCCCATCGAAAGTaGCCAGCAGCCCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: PALLPPYPELLLNQDSVVSPHRK*PAALPA
Trigger: GGCAGGAAGGGCTGCTGGTCACTTTCGATGGGGGCT...CACTACAGAGTCTTGGTTGAGGAGCAGTTCAGGGTAAGGTGGGAGGAGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp CCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTCACACTCGTCTGGGGCAGGAGATaGAGTCCCGTTCGATGGCTG +
Preference number: 4 (lower is better)
Translates to: PLPSRRCDLSSTKLGLTLVWGRR*SPVRWL
Trigger: CAGCCATCGAACGGGACTTCATCTCCTGCCCCAGAC...GAGTGTGAGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp CGGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCACCGGGCCTGGTAGATaGCTGTGCCACTGCCACCTT +
Preference number: 4 (lower is better)
Translates to: RLLEAYGRGKRRPLSTNPTGPGR*LCHCHL
Trigger: AAGGTGGCAGTGGCACAGTCATCTACCAGGCCCGGT...GGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp CCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTCACACTCACACGATGCGAGGCCTaGTCTCTGGGGCCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: PLPSRRCDLSSTKLGLTLTRCEA*SLGPGN
Trigger: GTTACCAGGCCCCAGAGATCAGGCCTCGCATCGTGT...GAGTGTGAGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp TCCCCGGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAACAGTTCTGTCAGAGGTaGCACTGGGCTCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SPAPGSLWKRQEEASLNQQFCQR*HWAPAA
Trigger: GGCTGCAGGAGCCCAGTGTCACCTCTGACAGAACTG...TTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCCGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp CTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCTGTGGCTTCCCATGGCCCCGCTGGGCACCTaGATCCTTCTCCAGGCCGAT +
Preference number: 4 (lower is better)
Translates to: LWKRQEEASLNQSLWLPMAPLGT*ILLQAD
Trigger: ATCGGCCTGGAGAAGGATTCAGGTGCCCAGCGGGGC...CATGGGAAGCCACAGGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp TGCCCAGGTCCTTCTGGGGTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATGCCTTGGCTTTGGAGCCTaGTGGTCTCTGGAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: CPGPSGVSHVQPLPSRRCLGFGA*WSLELP
Trigger: TGGGAGCTCCAGAGACCAGCAGGCTCCAAAGCCAAG...GCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAACCCCAGAAGGACCTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp TGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTCATGCCGCAGCCCCTCCTaGCCTTCCAGATTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: CSLCRAGDAISVPPSWASCRSPS*PSRFLQ
Trigger: CTGCAAGAATCTGGAAGGGCAGGAGGGGCTGCGGCA...TGAGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp GTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGAGACTGCGGCGCTGTTaGTCAGCCAGCACGGCCTCC +
Preference number: 4 (lower is better)
Translates to: VSHVQPLPSRRCDLSSTKRLRRC*SASTAS
Trigger: GGAGGCCGTGCTGGCTGAGCAACAGCGCCGCAGTCT...CTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp TGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTCACACTCCAGGAGCACCTTCACAGCCTaGAGGTGCTGGCTGAACGTC +
Preference number: 4 (lower is better)
Translates to: CRAGDAISVPPSWASHSRSTFTA*RCWLNV
Trigger: GACGTTCAGCCAGCACCTGCAGGCTGTGAAGGTGCT...CCTGGAGTGTGAGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp GGGCCTCACACTCCAGGGATTCAGAGCCTTGTGAAACAGGCTGAAAGACTGGGGAGATCTCCAGGAGTGTaGACTTGCCCTGGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: GPHTPGIQSLVKQAERLGRSPGV*TCPGAG
Trigger: CCCCGCGCCAGGGCAAGTCCACACTCCTGGAGATCT...CCCCAGTCTTTCAGCCTGTTTCACAAGGCTCTGAATCCCTGGAGTGTGAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp CCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTCACACTCGCCATGGCTCGTGTCTaGAAAGTGCAGCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: PLPSRRCDLSSTKLGLTLAMARV*KVQQGP
Trigger: GGGACCCTGCTGCACTTTCCAGACACGAGCCATGGC...GAGTGTGAGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp TGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTCACACTCCAGGGCGAAGCAGAGCGGGTaGATGCTGATGCCGATGAGT +
Preference number: 4 (lower is better)
Translates to: CRAGDAISVPPSWASHSRAKQSG*MLMPMS
Trigger: ACTCATCGGCATCAGCATCCACCCGCTCTGCTTCGC...CCTGGAGTGTGAGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR CCA 90 bp CCATTCATCTCTGCTATTGGGCAATGCTGCCTGCCCAGGTCCTTCTGGGGTTTCTGGGGCCTGGTAACCTaGGGTGCCCTCCACACCCAG +
Preference number: 4 (lower is better)
Translates to: PFISAIGQCCLPRSFWGFWGLVT*GALHTQ
Trigger: CTGGGTGTGGAGGGCACCCCAGGTTACCAGGCCCCA...GAAACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAATAGCAGAGATGAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR CCA 90 bp GGGCCTCACACTCCAGGGATTCAGAGCCTTGTGAAACAGGCTGAAAGACTGGGGCGGCTGCCCCAGAACTaGGCGGATGCCCTTGGACAA +
Preference number: 4 (lower is better)
Translates to: GPHTPGIQSLVKQAERLGRLPQN*ADALGQ
Trigger: TTGTCCAAGGGCATCCGCCCAGTTCTGGGGCAGCCG...CCCCAGTCTTTCAGCCTGTTTCACAAGGCTCTGAATCCCTGGAGTGTGAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR CCA 90 bp CTATTGGGCAATGCTGCCTGCCCAGGTCCTTCTGGGGTTTCCCATGTGCAGCCTTCGGTGAGCGAGTCCTaGTGGGTGAGGATCTGCGTG +
Preference number: 4 (lower is better)
Translates to: LLGNAACPGPSGVSHVQPSVSES*WVRICV
Trigger: CACGCAGATCCTCACCCACCAGGACTCGCTCACCGA...AGGCTGCACATGGGAAACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp CCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGACAGCCTGCAGGTGCTaGCTGAACGTCTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: PMCSLCRAGDAISVPPSWTACRC*LNVSPS
Trigger: GGATGGGGAGACGTTCAGCCAGCACCTGCAGGCTGT...CCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
3UTR CAA 72 bp TGGCTGTGTGGGAGCACAGGTAGGAGCAGCTTTCTTTaGGGGTGCCCCGTGCCACAGGAAACACAGCCACGA +
Preference number: 4 (lower is better)
Translates to: WLCGSTGRSSFL*GCPVPQETQPR
Trigger: TCGTGGCTGTGTTTCCTGTGGCACGGGGCACCCCAAAAGAAAGCTGCTCCTACCTGTGCTCCCACACAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp CCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCCACTTGGTGGTCCTaGTGGTGGCTTCACTGTGTG +
Preference number: 4 (lower is better)
Translates to: PCAAFAEQEMRSQFHQAGPTWWS*WWLHCV
Trigger: CACACAGTGAAGCCACCATCAGGACCACCAAGTGGG...CCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp CCAGGGACCCTTGCACTGGGCTTTCCGGCCATGACTCTTGAAGGAATCCATTCATGCAGCCGATGGAACTaGACTTCCTCCGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: PGTLALGFPAMTLEGIHSCSRWN*TSSGCP
Trigger: GGGGCAGCCGGAGGAAGTTCAGTTCCATCGGCTGCA...TGAATGGATTCCTTCAAGAGTCATGGCCGGAAAGCCCAGTGCAAGGGTCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp TGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTCGTGGCTATCCACACTaGGCTCTGGACCTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: CAAFAEQEMRSQFHQAGPRGYPH*ALDLEL
Trigger: CAGCTCAAGGTCCAGAGCTCAGTGTGGATAGCCACG...AGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp TCCCCGGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAACCTCTCGTTTGGATCTaGATGCTGGGCCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: SPAPGSLWKRQEEASLNQPLVWI*MLGPGC
Trigger: GCATCCTGGGCCCAGCATGCAGATCCAAACGAGAGG...TTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCCGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp ATTCCATCTGAGGCCTTCTCTTGCGAGTACAAGCCTCCAGCCGGCCCAGCTCCTCCTCTCGTTTGGATCTaGATGCTGGGCCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: IPSEAFSCEYKPPAGPAPPLVWI*MLGPGC
Trigger: GCATCCTGGGCCCAGCATGCAGATCCAAACGAGAGG...AGGAGCTGGGCCGGCTGGAGGCTTGTACTCGCAAGAGAAGGCCTCAGATGGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS-3UTR GCA 90 bp TGCCACAGGAAACACAGCCACGAGTCCGTCAGCCAGGCCTGCCAGCACCAGGAACCGCAGCATGGTGTCTaGTGGGGCATTAGCAGAATT +
Preference number: 4 (lower is better)
Translates to: CHRKHSHESVSQACQHQEPQHGV*WGISRI
Trigger: AATTCTGCTAATGCCCCAGCAGACACCATGCTGCGG...TTCCTGGTGCTGGCAGGCCTGGCTGACGGACTCGTGGCTGTGTTTCCTGTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS-3UTR CCA 90 bp CCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGGATTTCTTCCATGCTaGGGCACTGCACCGTGGAGC +
Preference number: 4 (lower is better)
Translates to: PMCSLCRAGDAISVPPSWGFLPC*GTAPWS
Trigger: GCTCCACGGTGCAGTGCCCCAGCATGGAAGAAATCC...CCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp GGTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAACGCTGCCACCACAGCTaGGTTGTCATCGGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GFPCAAFAEQEMRSQFHQRCHHS*VVIGGL
Trigger: GAGCCCACCGATGACAACCCAGCTGTGGTGGCAGCG...TTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp CCATTCATCTCTGCTATTGGGCAATGCTGCCTGCCCAGGTCCTTCTGGGGTTTCCAGTTCAGTAGCCGCTaGGGGGTACAGGGACCTGGC +
Preference number: 4 (lower is better)
Translates to: PFISAIGQCCLPRSFWGFQFSSR*GVQGPG
Trigger: GCCAGGTCCCTGTACCCCCCAGCGGCTACTGAACTG...GAAACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAATAGCAGAGATGAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp CGGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCGCGAAGGCAGGCAGTTaGCAGACAGGTCAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: RLLEAYGRGKRRPLSTNPAKAGS*QTGQAL
Trigger: CAGAGCTTGACCTGTCTGCCAACTGCCTGCCTTCGC...GGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp CCAGTAGCTCCTAGCTTCTCAGCCCTTCTTAGCAGAAGGTTTAGCAAAGAACCCAGCCCTGGAGCCCGATaGCGAGCGGCAGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PVAPSFSALLSRRFSKEPSPGAR*RAAEGQ
Trigger: CTGGCCCTCTGCCGCTCGCCATCGGGCTCCAGGGCT...GGGTTCTTTGCTAAACCTTCTGCTAAGAAGGGCTGAGAAGCTAGGAGCTACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp CCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGCTCCTGAAGTGGTACTaGGAGGTCTGGGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: PMCSLCRAGDAISVPPSWLLKWY*EVWVSG
Trigger: CCCAGACACCCAGACCTCCCAGTACCACTTCAGGAG...CCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR CCA 90 bp AGGATCTTGGTGGGGTGGGGACGAAGAATAAGAGGACATGGAGCAGTAGTCGGTTTCACAGCCACAGGCTaGCCCTGGTACCGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RILVGWGRRIRGHGAVVGFTATG*PWYRAW
Trigger: CCAGGCCCGGTACCAGGGCCAGCCTGTGGCTGTGAA...ACCGACTACTGCTCCATGTCCTCTTATTCTTCGTCCCCACCCCACCAAGATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp TGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTCCACGCGCTTCTCAGTaGGCAGGAACTGAACAGTCT +
Preference number: 4 (lower is better)
Translates to: CAAFAEQEMRSQFHQAGPPRASQ*AGTEQS
Trigger: AGACTGTTCAGTTCCTGCTCACTGAGAAGCGCGTGG...AGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp GGGCCTCACACTCCAGGGATTCAGAGCCTTGTGAAACAGGCTGAAAGACTGGGGGGGGCAACCGCACAATaGCGGGGAACTCATTCTTCC +
Preference number: 4 (lower is better)
Translates to: GPHTPGIQSLVKQAERLGGATAQ*RGTHSS
Trigger: GGAAGAATGAGTTCCCCGTCATTGTGCGGTTGCCCC...CCCCAGTCTTTCAGCCTGTTTCACAAGGCTCTGAATCCCTGGAGTGTGAGGCCC
58% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp GGGCCTCACACTCCAGGGATTCAGAGCCTTGTGAAACAGGCTGAAAGACTGGGGCTTCATTCCCTGCCTTaGTGGCCGCATAGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: GPHTPGIQSLVKQAERLGLHSLP*WPHRGA
Trigger: TGCCCCTCTATGCGGCCATCAAGGCAGGGAATGAAG...CCCCAGTCTTTCAGCCTGTTTCACAAGGCTCTGAATCCCTGGAGTGTGAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp CCAGGGACCCTTGCACTGGGCTTTCCGGCCATGACTCTTGAAGGAATCCATTCAGGCGCCCTCTGGTGGTaGACAGGGAGATCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: PGTLALGFPAMTLEGIHSGALWW*TGRSSL
Trigger: CAAAGAGGATCTCCCTGTTCACCACCAGAGGGCGCC...TGAATGGATTCCTTCAAGAGTCATGGCCGGAAAGCCCAGTGCAAGGGTCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp TGCCCAGGTCCTTCTGGGGTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATGCCGATGTCCCAGACGTTaGACTCTACGGACTCAACCT +
Preference number: 4 (lower is better)
Translates to: CPGPSGVSHVQPLPSRRCRCPRR*TLRTQP
Trigger: AGGTTGAGTCCGTAGAGTTCAACGTCTGGGACATCG...GCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAACCCCAGAAGGACCTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp CCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTCACACTCCCTTGGCCTCAATGTTaGGCAGCCAGAACTGGAGGT +
Preference number: 4 (lower is better)
Translates to: PLPSRRCDLSSTKLGLTLPWPQC*AARTGG
Trigger: ACCTCCAGTTCTGGCTGCTCAACATTGAGGCCAAGG...GAGTGTGAGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp CCAGGGACCCTTGCACTGGGCTTTCCGGCCATGACTCTTGAAGGAATCCATTCAGTCTGGGGCAGGAGATaGAGTCCCGTTCGATGGCTG +
Preference number: 4 (lower is better)
Translates to: PGTLALGFPAMTLEGIHSVWGRR*SPVRWL
Trigger: CAGCCATCGAACGGGACTTCATCTCCTGCCCCAGAC...TGAATGGATTCCTTCAAGAGTCATGGCCGGAAAGCCCAGTGCAAGGGTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp TGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTCAGCTGATGCCGATGAGTaGCACGATGCAAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: CSLCRAGDAISVPPSWASADADE*HDARML
Trigger: CAGCATCCTTGCATCGTGTCACTCATCGGCATCAGC...TGAGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp GCCCTTCTCTGTGTTGACCACCGTGTAATTCAGTGGGTCTCTGTACTTCCCTGCCCCAGCACTCCATCATaGGCGCCTGCAGCCGATGGA +
Preference number: 4 (lower is better)
Translates to: ALLCVDHRVIQWVSVLPCPSTPS*APAADG
Trigger: TCCATCGGCTGCAGGCGCTCATGATGGAGTGCTGGG...GCAGGGAAGTACAGAGACCCACTGAATTACACGGTGGTCAACACAGAGAAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp GGGCCTCACACTCCAGGGATTCAGAGCCTTGTGAAACAGGCTGAAAGACTGGGGCTCCTGGCTCTGGGATaGGAAGAAGGCCGACTGCTT +
Preference number: 4 (lower is better)
Translates to: GPHTPGIQSLVKQAERLGLLALG*EEGRLL
Trigger: AAGCAGTCGGCCTTCTTCTCATCCCAGAGCCAGGAG...CCCCAGTCTTTCAGCCTGTTTCACAAGGCTCTGAATCCCTGGAGTGTGAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp CCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCTCTGGACCTTGAGCTaGCAGCTCAACTTCATCCCG +
Preference number: 4 (lower is better)
Translates to: PCAAFAEQEMRSQFHQAGLWTLS*QLNFIP
Trigger: CGGGATGAAGTTGAGCTGTCAGCTCAAGGTCCAGAG...CCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp CCAGGGACCCTTGCACTGGGCTTTCCGGCCATGACTCTTGAAGGAATCCATTCAGCCAGAACTGGAGGTTaGCCACGGCTTCCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: PGTLALGFPAMTLEGIHSARTGG*PRLPLP
Trigger: TGGGAGAGGAAGCCGTGGCCAACCTCCAGTTCTGGC...TGAATGGATTCCTTCAAGAGTCATGGCCGGAAAGCCCAGTGCAAGGGTCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp TGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTCACACTCCAGGGTACTGCTCCATCAGTaGGGTCCCGTCACTTTCTGT +
Preference number: 4 (lower is better)
Translates to: CRAGDAISVPPSWASHSRVLLHQ*GPVTFC
Trigger: ACAGAAAGTGACGGGACCCCACTGATGGAGCAGTAC...CCTGGAGTGTGAGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR CCA 90 bp TCCCCGGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAAGTGTACTCCTGGCTCTaGGATGAGAAGAAGGCCGAC +
Preference number: 4 (lower is better)
Translates to: SPAPGSLWKRQEEASLNQVYSWL*DEKKAD
Trigger: GTCGGCCTTCTTCTCATCCCAGAGCCAGGAGTACAC...TTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCCGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp TGGGGTCACTCTCCCCGGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTAGGATCTTGGTGGGGTaGGGACGAAGAATAAGAGGA +
Preference number: 4 (lower is better)
Translates to: WGHSPRLLEAYGRGKRRPRILVG*GRRIRG
Trigger: TCCTCTTATTCTTCGTCCCCACCCCACCAAGATCCT...AGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCCGGGGAGAGTGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp ATTGGGCAATGCTGCCTGCCCAGGTCCTTCTGGGGTTTCCCATGTGCAGCCTTTACGTCTCCCCATCCATaGGGCTCAGGTCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: IGQCCLPRSFWGFPCAAFTSPHP*GSGHAQ
Trigger: CTGAGCATGACCTGAGCCCCATGGATGGGGAGACGT...AAAGGCTGCACATGGGAAACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp GTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGAGATGTCAAACTCCCTaGCGCCCCAGCCCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: VSHVQPLPSRRCDLSSTKRCQTP*RPSPSR
Trigger: TCTGGAGGGGCTGGGGCGCCAGGGAGTTTGACATCT...CTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
3UTR CAA 72 bp AGGATGGTGCAGTCAATGACGAGGAGGCCAGGCCCGTaGCTGTACCAGACCTCAGACCCACTGTTGACCACT +
Preference number: 4 (lower is better)
Translates to: RMVQSMTRRPGP*LYQTSDPLLTT
Trigger: AGTGGTCAACAGTGGGTCTGAGGTCTGGTACAGCAACGGGCCTGGCCTCCTCGTCATTGACTGCACCATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp CGGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCAATCCAGGAGGGAGGTaGGACAGTTTGTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RLLEAYGRGKRRPLSTNPNPGGR*DSLLLE
Trigger: CTCCAGCAACAAACTGTCTCACCTCCCTCCTGGATT...GGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp CTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCTGTGGCTTCCCATGCCACCAGCAGCATCCTaGGGTCTTCCGCTTGGATCA +
Preference number: 4 (lower is better)
Translates to: LWKRQEEASLNQSLWLPMPPAAS*GLPLGS
Trigger: TGATCCAAGCGGAAGACCTCAGGATGCTGCTGGTGG...CATGGGAAGCCACAGGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp GGGCCTCACACTCCAGGGATTCAGAGCCTTGTGAAACAGGCTGAAAGACTGGGGCTGAGGATTCCACACTaGGGTAGCCCCCATCGAAAG +
Preference number: 4 (lower is better)
Translates to: GPHTPGIQSLVKQAERLGLRIPH*GSPHRK
Trigger: CTTTCGATGGGGGCTACCTCAGTGTGGAATCCTCAG...CCCCAGTCTTTCAGCCTGTTTCACAAGGCTCTGAATCCCTGGAGTGTGAGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp TCCCCGGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAACCCGTTCGATGGCTGTaGGCACACAGTCTTCCATAT +
Preference number: 4 (lower is better)
Translates to: SPAPGSLWKRQEEASLNQPVRWL*AHSLPY
Trigger: ATATGGAAGACTGTGTGCTCACAGCCATCGAACGGG...TTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCCGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp TGCCCAGGTCCTTCTGGGGTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATGCCTGGGAAGTCAGTCATaGACAGCTCTGGTACAAGCT +
Preference number: 4 (lower is better)
Translates to: CPGPSGVSHVQPLPSRRCLGSQS*TALVQA
Trigger: AGCTTGTACCAGAGCTGTTCATGACTGACTTCCCAG...GCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAACCCCAGAAGGACCTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp TTTGCCACCACTGCGGCATCCACCAGAACCCCGTGCCGATTGAGCTCTCGGGCTCTCCTGACGGAAATCTaGGAAGTTCTTCATGGCATC +
Preference number: 4 (lower is better)
Translates to: FATTAASTRTPCRLSSRALLTEI*EVLHGI
Trigger: GATGCCATGAAGAACTTCTCAGATTTCCGTCAGGAG...AGCCCGAGAGCTCAATCGGCACGGGGTTCTGGTGGATGCCGCAGTGGTGGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp TGGGGTCACTCTCCCCGGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTAACTTCTTGACAATCTaGAGTTGGTGGTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: WGHSPRLLEAYGRGKRRPNFLTI*SWWWPS
Trigger: ACTGGGCCACCACCAACTTCAGATTGTCAAGAAGTT...AGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCCGGGGAGAGTGACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp GTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTCCTGGCTCTGGGATaGGAAGAAGGCCGACTGCTT +
Preference number: 4 (lower is better)
Translates to: VSHVQPLPSRRCDLSSTKLLALG*EEGRLL
Trigger: AAGCAGTCGGCCTTCTTCTCATCCCAGAGCCAGGAG...CTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp CCAGCCCTCCTCCCACCTTACCCTGAACTGCTCCTCAACCAAGACTCTGTAGTGGGCCCTTCTCTGTGTTaGCCACCGTGTAATTCCTGG +
Preference number: 4 (lower is better)
Translates to: PALLPPYPELLLNQDSVVGPSLC*PPCNSW
Trigger: CCAGGAATTACACGGTGGTCAACACAGAGAAGGGCC...CACTACAGAGTCTTGGTTGAGGAGCAGTTCAGGGTAAGGTGGGAGGAGGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp CCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGAACCCCGTGCCGATTaGGCTCTCGGGCTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: PMCSLCRAGDAISVPPSWEPRAD*ALGLLK
Trigger: TTTTAAAAGCCCGAGAGCTCAATCGGCACGGGGTTC...CCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp TGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTCATACACTTCTCTGCTTTaGGCAGCTGAGCACGCAGGA +
Preference number: 4 (lower is better)
Translates to: CSLCRAGDAISVPPSWASYTSLL*AAEHAG
Trigger: TCCTGCGTGCTCAGCTGCGCAAAGCAGAGAAGTGTA...TGAGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp GTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGTCCATGGCTCTCAGGTaGCGCAGCATGGTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: VSHVQPLPSRRCDLSSTKSMALR*RSMVSA
Trigger: AGCAGACACCATGCTGCGGCACCTGAGAGCCATGGA...CTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR GCA 90 bp CCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGCCATCTCCTCTCCTCTaGAGTCTGAGCTGCACACAA +
Preference number: 4 (lower is better)
Translates to: PMCSLCRAGDAISVPPSWPSPLL*SLSCTQ
Trigger: TTGTGTGCAGCTCAGACTGCAGAGGAGAGGAGATGG...CCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp CCATTCATCTCTGCTATTGGGCAATGCTGCCTGCCCAGGTCCTTCTGGGGTTTCTTCACAGCCTGCAGGTaGTGGCTGAACGTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PFISAIGQCCLPRSFWGFFTACR*WLNVSP
Trigger: TGGGGAGACGTTCAGCCAGCACCTGCAGGCTGTGAA...GAAACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAATAGCAGAGATGAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp CGGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCCATTATGGGTCTCCATaGCAGGTCCTGGACACACAG +
Preference number: 4 (lower is better)
Translates to: RLLEAYGRGKRRPLSTNPHYGSP*QVLDTQ
Trigger: CTGTGTGTCCAGGACCTGCCATGGAGACCCATAATG...GGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp CCAGTAGCTCCTAGCTTCTCAGCCCTTCTTAGCAGAAGGTTTAGCAAAGAACCCGTCTCCAGATCCCCGTaGGCTGCCGCGATGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PVAPSFSALLSRRFSKEPVSRSP*AAAMLS
Trigger: GCTGAGCATCGCGGCAGCCCACGGGGATCTGGAGAC...GGGTTCTTTGCTAAACCTTCTGCTAAGAAGGGCTGAGAAGCTAGGAGCTACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp GGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCTGGCAGCTCCCCCAGCTaGTTGTTTGAGAGATTCAGC +
Preference number: 4 (lower is better)
Translates to: GSWKPMEEARGGLSQPIPGSSPS*LFERFS
Trigger: GCTGAATCTCTCAAACAACCAGCTGGGGGAGCTGCC...AGGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp GGGGTCCCAGCCCTCCTCCCACCTTACCCTGAACTGCTCCTCAACCAAGACTCTGACAGCCATTTTGTCTaGCAGCGATTCCAGGGCATT +
Preference number: 4 (lower is better)
Translates to: GVPALLPPYPELLLNQDSDSHFV*QRFQGI
Trigger: AATGCCCTGGAATCGCTGCCAGACAAAATGGCTGTC...AGAGTCTTGGTTGAGGAGCAGTTCAGGGTAAGGTGGGAGGAGGGCTGGGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp CTATTGGGCAATGCTGCCTGCCCAGGTCCTTCTGGGGTTTCCCATGTGCAGCCTTCCAGGGTCTTGAGTTaGGTGCAGGTCCACTTCTCT +
Preference number: 4 (lower is better)
Translates to: LLGNAACPGPSGVSHVQPSRVLS*VQVHFS
Trigger: AGAGAAGTGGACCTGCACCCAACTCAAGACCCTGGA...AGGCTGCACATGGGAAACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp GTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGGGCTTTGGAGCCTGCTaGTCTCTGGAGCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: VSHVQPLPSRRCDLSSTKGFGAC*SLELPL
Trigger: AAGTGGGAGCTCCAGAGACCAGCAGGCTCCAAAGCC...CTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp TTCATCTCTGCTATTGGGCAATGCTGCCTGCCCAGGTCCTTCTGGGGTTTCCCATTGAGCAGCCAGAACTaGAGGTTGGCCACGGCTTCC +
Preference number: 4 (lower is better)
Translates to: FISAIGQCCLPRSFWGFPLSSQN*RLATAS
Trigger: GGAAGCCGTGGCCAACCTCCAGTTCTGGCTGCTCAA...TGGGAAACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAATAGCAGAGATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp TGGGGTCACTCTCCCCGGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTCTTCCTGCCAGTAGATaGTCTGATTTCTTCGGACTC +
Preference number: 4 (lower is better)
Translates to: WGHSPRLLEAYGRGKRRPLPASR*SDFFGL
Trigger: GAGTCCGAAGAAATCAGACCATCTACTGGCAGGAAG...AGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCCGGGGAGAGTGACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp CGGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCCAGGAAGAGCCTGGCTaGGAAGTCAGTCATGAACAG +
Preference number: 4 (lower is better)
Translates to: RLLEAYGRGKRRPLSTNPQEEPG*EVSHEQ
Trigger: CTGTTCATGACTGACTTCCCAGCCAGGCTCTTCCTG...GGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp CCAGCCCTCCTCCCACCTTACCCTGAACTGCTCCTCAACCAAGACTCTGTAGTGTCTTCATGGCATCCATaGCTCTCAGGTGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: PALLPPYPELLLNQDSVVSSWHP*LSGAAA
Trigger: TGCTGCGGCACCTGAGAGCCATGGATGCCATGAAGA...CACTACAGAGTCTTGGTTGAGGAGCAGTTCAGGGTAAGGTGGGAGGAGGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR CCA 90 bp ATTGGGCAATGCTGCCTGCCCAGGTCCTTCTGGGGTTTCCCATGTGCAGCCTTTTCTTCATGGCATCCATaGCTCTCAGGTGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: IGQCCLPRSFWGFPCAAFSSWHP*LSGAAA
Trigger: TGCTGCGGCACCTGAGAGCCATGGATGCCATGAAGA...AAAGGCTGCACATGGGAAACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR CCA 90 bp TGCCCAGGTCCTTCTGGGGTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATGCACCACAGTGTACTCCTaGCTCTGGGATGAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: CPGPSGVSHVQPLPSRRCTTVYS*LWDEKK
Trigger: CTTCTTCTCATCCCAGAGCCAGGAGTACACTGTGGT...GCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAACCCCAGAAGGACCTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp GTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGTCAGTGAGCAGGAACTaGACAGTCTCCAGATCCCCG +
Preference number: 4 (lower is better)
Translates to: VSHVQPLPSRRCDLSSTKSVSRN*TVSRSP
Trigger: CGGGGATCTGGAGACTGTTCAGTTCCTGCTCACTGA...CTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp GGGGTCCCAGCCCTCCTCCCACCTTACCCTGAACTGCTCCTCAACCAAGACTCTCAGCTTTTGAAGTTTTaGGAGGTGCAGGAATCCAGG +
Preference number: 4 (lower is better)
Translates to: GVPALLPPYPELLLNQDSQLLKF*EVQESR
Trigger: CCTGGATTCCTGCACCTCTCAAAACTTCAAAAGCTG...AGAGTCTTGGTTGAGGAGCAGTTCAGGGTAAGGTGGGAGGAGGGCTGGGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp GGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCTCCTTCATGTTGCACGTaGCGTGGAAGATCAGTTGCC +
Preference number: 4 (lower is better)
Translates to: GSWKPMEEARGGLSQPIPPSCCT*RGRSVA
Trigger: GGCAACTGATCTTCCACGTCACGTGCAACATGAAGG...AGGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp CCAGTAGCTCCTAGCTTCTCAGCCCTTCTTAGCAGAAGGTTTAGCAAAGAACCCAGCCCCCATCGAAAGTaGCCAGCAGCCCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: PVAPSFSALLSRRFSKEPSPHRK*PAALPA
Trigger: GGCAGGAAGGGCTGCTGGTCACTTTCGATGGGGGCT...GGGTTCTTTGCTAAACCTTCTGCTAAGAAGGGCTGAGAAGCTAGGAGCTACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp ATTGGGCAATGCTGCCTGCCCAGGTCCTTCTGGGGTTTCCCATGTGCAGCCTTTCCCGTTCGATGGCTGTaGGCACACAGTCTTCCATAT +
Preference number: 4 (lower is better)
Translates to: IGQCCLPRSFWGFPCAAFPVRWL*AHSLPY
Trigger: ATATGGAAGACTGTGTGCTCACAGCCATCGAACGGG...AAAGGCTGCACATGGGAAACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp GCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCTGTGGCTTCCCAAGCATGCTGGCCTCCTaGCGGAAATCTGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: AYGRGKRRPLSTNPCGFPSMLAS*RKSEKF
Trigger: GAACTTCTCAGATTTCCGTCAGGAGGCCAGCATGCT...TGGGAAGCCACAGGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp CCAGGGACCCTTGCACTGGGCTTTCCGGCCATGACTCTTGAAGGAATCCATTCAGCTGATGCCGATGAGTaGCACGATGCAAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: PGTLALGFPAMTLEGIHSADADE*HDARML
Trigger: CAGCATCCTTGCATCGTGTCACTCATCGGCATCAGC...TGAATGGATTCCTTCAAGAGTCATGGCCGGAAAGCCCAGTGCAAGGGTCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp GCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCTGTGGCTTCCCACCTCAGACCCACTGTTaGCCACTTCCATTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: AYGRGKRRPLSTNPCGFPPQTHC*PLPLPS
Trigger: TGAAGGCAATGGAAGTGGTCAACAGTGGGTCTGAGG...TGGGAAGCCACAGGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp GGGCCTCACACTCCAGGGATTCAGAGCCTTGTGAAACAGGCTGAAAGACTGGGGCAGCTTACACTTCTCTaGTTTGCGCAGCTGAGCACG +
Preference number: 4 (lower is better)
Translates to: GPHTPGIQSLVKQAERLGQLTLL*FAQLST
Trigger: CGTGCTCAGCTGCGCAAAGCAGAGAAGTGTAAGCTG...CCCCAGTCTTTCAGCCTGTTTCACAAGGCTCTGAATCCCTGGAGTGTGAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp GTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCGTGCTATGAACCGTTaGCAGAAGCCAACAGGCACG +
Preference number: 4 (lower is better)
Translates to: VSHVQPLPSRRCDLSSTKRAMNR*QKPTGT
Trigger: CGTGCCTGTTGGCTTCTGGCAACGGTTCATAGCACG...CTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp CGTCTCCCCATCCATGGGGCTCAGGTCATGCTCAGTTCTGTCAGAGGTGACACTGACACGATGCAAGGATaGTGCAAGGCATGCAGCATG +
Preference number: 4 (lower is better)
Translates to: RLPIHGAQVMLSSVRGDTDTMQG*CKACSM
Trigger: CATGCTGCATGCCTTGCAGCATCCTTGCATCGTGTC...AGTGTCACCTCTGACAGAACTGAGCATGACCTGAGCCCCATGGATGGGGAGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS-3UTR GCA 90 bp CCAGCCCTCCTCCCACCTTACCCTGAACTGCTCCTCAACCAAGACTCTGTAGTGCATCTTCGTCGGGGATaGAGAACTTGGACCTGTTGG +
Preference number: 4 (lower is better)
Translates to: PALLPPYPELLLNQDSVVHLRRG*RTWTCW
Trigger: CCAACAGGTCCAAGTTCTGCATCCCCGACGAAGATG...CACTACAGAGTCTTGGTTGAGGAGCAGTTCAGGGTAAGGTGGGAGGAGGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp CCAGCCCTCCTCCCACCTTACCCTGAACTGCTCCTCAACCAAGACTCTGTAGTGATGTTGCACGTGACGTaGAAGATCAGTTGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: PALLPPYPELLLNQDSVVMLHVT*KISCRS
Trigger: GCTGCGGCAACTGATCTTCCACGTCACGTGCAACAT...CACTACAGAGTCTTGGTTGAGGAGCAGTTCAGGGTAAGGTGGGAGGAGGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp CCAGGGACCCTTGCACTGGGCTTTCCGGCCATGACTCTTGAAGGAATCCATTCATGTCCAGCCCAGGCTTaGATGGAAGGAGGTGTGGTA +
Preference number: 4 (lower is better)
Translates to: PGTLALGFPAMTLEGIHSCPAQA*MEGGVV
Trigger: TACCACACCTCCTTCCATCCAAGCCTGGGCTGGACA...TGAATGGATTCCTTCAAGAGTCATGGCCGGAAAGCCCAGTGCAAGGGTCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp TGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTCACACTCCAGGCTGAGAAGTTCTTCATaGCATCCATGGCTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: CRAGDAISVPPSWASHSRLRSSS*HPWLSG
Trigger: ACCTGAGAGCCATGGATGCCATGAAGAACTTCTCAG...CCTGGAGTGTGAGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR CCA 90 bp TACAAGCCTCCAGCCGGCCCAGCTCCTCATAGGACTGGTAGAAGATGTCAAACTGCGAAGCAGAGCGGGTaGATGCTGATGCCGATGAGT +
Preference number: 4 (lower is better)
Translates to: YKPPAGPAPHRTGRRCQTAKQSG*MLMPMS
Trigger: ACTCATCGGCATCAGCATCCACCCGCTCTGCTTCGC...AGTTTGACATCTTCTACCAGTCCTATGAGGAGCTGGGCCGGCTGGAGGCTTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS-3UTR CCA 90 bp GTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCCACCGTGTAATTCCTaGACTCCTCCTTCCCATCCC +
Preference number: 4 (lower is better)
Translates to: VSHVQPLPSRRCDLSSTKPPCNS*TPPSHP
Trigger: GGGATGGGAAGGAGGAGTCCAGGAATTACACGGTGG...CTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp TGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTCACAGAGCTGGTAGGTaGCTGAGTGGTACATCACTA +
Preference number: 4 (lower is better)
Translates to: CAAFAEQEMRSQFHQAGPHRAGR*LSGTSL
Trigger: TAGTGATGTACCACTCAGCCACCTACCAGCTCTGTG...AGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp CCAGTAGCTCCTAGCTTCTCAGCCCTTCTTAGCAGAAGGTTTAGCAAAGAACCCGTGAGCGAGTCCTGGTaGGTGAGGATCTGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: PVAPSFSALLSRRFSKEPVSESW*VRICVP
Trigger: GGGCACGCAGATCCTCACCCACCAGGACTCGCTCAC...GGGTTCTTTGCTAAACCTTCTGCTAAGAAGGGCTGAGAAGCTAGGAGCTACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
3UTR CAA 72 bp TGTTTTCATTTGCAAAGCTGCACACTACGGTGTCCTTaGCCACCACTGCGGCATCCACCAGAACCCCGTGCC +
Preference number: 4 (lower is better)
Translates to: CFHLQSCTLRCP*PPLRHPPEPRA
Trigger: GGCACGGGGTTCTGGTGGATGCCGCAGTGGTGGCAAAGGACACCGTAGTGTGCAGCTTTGCAAATGAAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp TTTGTCGGGGGAGAAGAATGTAAAGGGAGACCAGGGACCCTTGCACTGGGCTTTCCCATTCTTTGCCACTaGCCGCGAGCCCTTGATGTT +
Preference number: 4 (lower is better)
Translates to: FVGGEECKGRPGTLALGFPILCH*PRALDV
Trigger: AACATCAAGGGCTCGCGGTCAGTGGCAAAGAATGGG...AAAGCCCAGTGCAAGGGTCCCTGGTCTCCCTTTACATTCTTCTCCCCCGACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp TGCCCAGGTCCTTCTGGGGTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATGCTTTCCAGTTCACATCTaGGGATTCCACACTGAGGTA +
Preference number: 4 (lower is better)
Translates to: CPGPSGVSHVQPLPSRRCFPVHI*GFHTEV
Trigger: TACCTCAGTGTGGAATCCTCAGATGTGAACTGGAAA...GCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAACCCCAGAAGGACCTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp CCAGCCCTCCTCCCACCTTACCCTGAACTGCTCCTCAACCAAGACTCTGTAGTGCTGGGAAGTCAGTCATaGACAGCTCTGGTACAAGCT +
Preference number: 4 (lower is better)
Translates to: PALLPPYPELLLNQDSVVLGSQS*TALVQA
Trigger: AGCTTGTACCAGAGCTGTTCATGACTGACTTCCCAG...CACTACAGAGTCTTGGTTGAGGAGCAGTTCAGGGTAAGGTGGGAGGAGGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp GGATGCAGAACTTGGACCTGTTGGCTGTGTGGGAGCACAGGTAGGAGCAGCTTTAGCATGCTGGCCTCCTaGCGGAAATCTGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: GCRTWTCWLCGSTGRSSFSMLAS*RKSEKF
Trigger: GAACTTCTCAGATTTCCGTCAGGAGGCCAGCATGCT...AAAGCTGCTCCTACCTGTGCTCCCACACAGCCAACAGGTCCAAGTTCTGCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp CCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTCACACTCAACTTCTTGACAATCTaGAGTTGGTGGTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: PLPSRRCDLSSTKLGLTLNFLTI*SWWWPS
Trigger: ACTGGGCCACCACCAACTTCAGATTGTCAAGAAGTT...GAGTGTGAGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp CCAGGGACCCTTGCACTGGGCTTTCCGGCCATGACTCTTGAAGGAATCCATTCAAGGGCAGCATGTACATaGAGGTGGCAAAGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: PGTLALGFPAMTLEGIHSRAACT*RWQRLG
Trigger: ACCCAACCTTTGCCACCTTCATGTACATGCTGCCCT...TGAATGGATTCCTTCAAGAGTCATGGCCGGAAAGCCCAGTGCAAGGGTCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp TTCATCTCTGCTATTGGGCAATGCTGCCTGCCCAGGTCCTTCTGGGGTTTCCCAAGGGCAGCATGTACATaGAGGTGGCAAAGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: FISAIGQCCLPRSFWGFPRAACT*RWQRLG
Trigger: ACCCAACCTTTGCCACCTTCATGTACATGCTGCCCT...TGGGAAACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAATAGCAGAGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp GCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCTGTGGCTTCCCATTTGAGGTGGTTTTGTaGCTGCCTGGGGTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: AYGRGKRRPLSTNPCGFPFEVVL*LPGVSR
Trigger: CCTAGAAACCCCAGGCAGTCACAAAACCACCTCAAA...TGGGAAGCCACAGGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp GGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCTCTGGTAAAGACAGTTTaGTGCCCATGTCTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: GSWKPMEEARGGLSQPIPLVKTV*CPCLRH
Trigger: GTGCCGAAGACATGGGCAGCAAACTGTCTTTACCAG...AGGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp CTATTGGGCAATGCTGCCTGCCCAGGTCCTTCTGGGGTTTCCCATGTGCAGCCTGCCCTTCCAGATTCTTaGAGGAGATCTCATGCAAGT +
Preference number: 4 (lower is better)
Translates to: LLGNAACPGPSGVSHVQPALPDS*RRSHAS
Trigger: ACTTGCATGAGATCTCCTGCAAGAATCTGGAAGGGC...AGGCTGCACATGGGAAACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp TTTGTCGGGGGAGAAGAATGTAAAGGGAGACCAGGGACCCTTGCACTGGGCTTTTTCTCACCCTCCGTGTaGTCCAGCTTGCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: FVGGEECKGRPGTLALGFFSPSV*SSLLFS
Trigger: GGAGAACAGCAAGCTGGAGCACACGGAGGGTGAGAA...AAAGCCCAGTGCAAGGGTCCCTGGTCTCCCTTTACATTCTTCTCCCCCGACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR GCA 90 bp GTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCCGCAGCATGGTGTCTaGTGGGGCATTAGCAGAATT +
Preference number: 4 (lower is better)
Translates to: VSHVQPLPSRRCDLSSTKPQHGV*WGISRI
Trigger: AATTCTGCTAATGCCCCAGCAGACACCATGCTGCGG...CTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR GCA 90 bp CCAGGGACCCTTGCACTGGGCTTTCCGGCCATGACTCTTGAAGGAATCCATTCAGACACGATGCAAGGATaGTGCAAGGCATGCAGCATG +
Preference number: 4 (lower is better)
Translates to: PGTLALGFPAMTLEGIHSDTMQG*CKACSM
Trigger: CATGCTGCATGCCTTGCAGCATCCTTGCATCGTGTC...TGAATGGATTCCTTCAAGAGTCATGGCCGGAAAGCCCAGTGCAAGGGTCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR GCA 90 bp CAACTTGCCTTTTCTTCATCTGCTGTCCACGTGGGCAGTAAATGTTTGGCAAATCCTGGTAACCTGGGGTaGCCTCCACACCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: QLAFSSSAVHVGSKCLANPGNLG*PPHPGP
Trigger: GGGCCCTGGGTGTGGAGGGCACCCCAGGTTACCAGG...ATTTGCCAAACATTTACTGCCCACGTGGACAGCAGATGAAGAAAAGGCAAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp TGGGGTCACTCTCCCCGGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTTTTGATAACAGGTACTaGCAAGAAACAGGTGACGAC +
Preference number: 4 (lower is better)
Translates to: WGHSPRLLEAYGRGKRRPFDNRY*QETGDD
Trigger: GTCGTCACCTGTTTCTTGGCAGTACCTGTTATCAAA...AGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCCGGGGAGAGTGACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp GCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCTGTGGCTTCCCAAGGTGGTTTTGTGACTaGCTGGGGTTTCTAGGACTG +
Preference number: 4 (lower is better)
Translates to: AYGRGKRRPLSTNPCGFPRWFCD*LGFLGL
Trigger: CAGTCCTAGAAACCCCAGGCAGTCACAAAACCACCT...TGGGAAGCCACAGGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp GCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCTGTGGCTTCCCAGAGCAGATGTTTGCTTaGCTCAGGACTATCCAGCAG +
Preference number: 4 (lower is better)
Translates to: AYGRGKRRPLSTNPCGFPEQMFA*LRTIQQ
Trigger: CTGCTGGATAGTCCTGAGCCAAGCAAACATCTGCTC...TGGGAAGCCACAGGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp CCATTCATCTCTGCTATTGGGCAATGCTGCCTGCCCAGGTCCTTCTGGGGTTTCGGCAGCGACAACAGCTaGTTTCCCTGTAACCTCAAG +
Preference number: 4 (lower is better)
Translates to: PFISAIGQCCLPRSFWGFGSDNS*FPCNLK
Trigger: CTTGAGGTTACAGGGAAACCAGCTGTTGTCGCTGCC...GAAACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAATAGCAGAGATGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp GGTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAACCACTTCTCTTGAGGTaGCAGCGACAACAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: GFPCAAFAEQEMRSQFHQPLLLR*QRQQLV
Trigger: AACCAGCTGTTGTCGCTGCCACCTCAAGAGAAGTGG...TTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp AAACAAGATTATGATGTGCAAACAAACAGGGCTTGTGCTCCAGCTGTGTCCAAGAGTGTGGACTTGCCCTaGCGCGGGGGACCCACGAGG +
Preference number: 4 (lower is better)
Translates to: KQDYDVQTNRACAPAVSKSVDLP*RGGPTR
Trigger: CCTCGTGGGTCCCCCGCGCCAGGGCAAGTCCACACT...CTTGGACACAGCTGGAGCACAAGCCCTGTTTGTTTGCACATCATAATCTTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp TTCATCTCTGCTATTGGGCAATGCTGCCTGCCCAGGTCCTTCTGGGGTTTCCCAAGGTTCCTTAGGCCATaGCTCGTGTCTGGAAAGTGC +
Preference number: 4 (lower is better)
Translates to: FISAIGQCCLPRSFWGFPRFLRP*LVSGKC
Trigger: GCACTTTCCAGACACGAGCCATGGCCTAAGGAACCT...TGGGAAACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAATAGCAGAGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp TTCATCTCTGCTATTGGGCAATGCTGCCTGCCCAGGTCCTTCTGGGGTTTCCCACAGGAAGAGCCTGGCTaGGAAGTCAGTCATGAACAG +
Preference number: 4 (lower is better)
Translates to: FISAIGQCCLPRSFWGFPQEEPG*EVSHEQ
Trigger: CTGTTCATGACTGACTTCCCAGCCAGGCTCTTCCTG...TGGGAAACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAATAGCAGAGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR CCA 90 bp GGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCTGAAGGTGGCAAAGGTTaGGTCTTTCATCTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: GSWKPMEEARGGLSQPIPEGGKG*VFHLAH
Trigger: GTGAGCCAGATGAAAGACCCAACCTTTGCCACCTTC...AGGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp AGGTGGCTGAGTGGTACATCACTAAGCAATTGGCCTTGTCGTCGAGGCACCAGAGTGTACTCCTGGCTCTaGGATGAGAAGAAGGCCGAC +
Preference number: 4 (lower is better)
Translates to: RWLSGTSLSNWPCRRGTRVYSWL*DEKKAD
Trigger: GTCGGCCTTCTTCTCATCCCAGAGCCAGGAGTACAC...TCTGGTGCCTCGACGACAAGGCCAATTGCTTAGTGATGTACCACTCAGCCACCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS-3UTR CCA 90 bp GGTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAAGAACTTGGACCTGTTaGCTGTGTGGGAGCACAGGT +
Preference number: 4 (lower is better)
Translates to: GFPCAAFAEQEMRSQFHQRTWTC*LCGSTG
Trigger: ACCTGTGCTCCCACACAGCCAACAGGTCCAAGTTCT...TTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp GTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGTTCCATTGCCTTCACTaGGTAAGGGTTCTGCCGTGC +
Preference number: 4 (lower is better)
Translates to: VSHVQPLPSRRCDLSSTKFHCLH*VRVLPC
Trigger: GCACGGCAGAACCCTTACCCAGTGAAGGCAATGGAA...CTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp CTATTGGGCAATGCTGCCTGCCCAGGTCCTTCTGGGGTTTCCCATGTGCAGCCTGGTCTTCATAGTCTTTaGTATCATTGCCAGGCGTCT +
Preference number: 4 (lower is better)
Translates to: LLGNAACPGPSGVSHVQPGLHSL*YHCQAS
Trigger: AGACGCCTGGCAATGATATCAAAGACTATGAAGACC...AGGCTGCACATGGGAAACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp TGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTCATTTCCAGTTCACATCTaGGGATTCCACACTGAGGTA +
Preference number: 4 (lower is better)
Translates to: CSLCRAGDAISVPPSWASFPVHI*GFHTEV
Trigger: TACCTCAGTGTGGAATCCTCAGATGTGAACTGGAAA...TGAGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp AGACTCTGTAGTGTAATTCCATCTGAGGCCTTCTCTTGCGAGTACAAGCCTCCAACCGGGCCTGGTAGATaGCTGTGCCACTGCCACCTT +
Preference number: 4 (lower is better)
Translates to: RLCSVIPSEAFSCEYKPPTGPGR*LCHCHL
Trigger: AAGGTGGCAGTGGCACAGTCATCTACCAGGCCCGGT...TGGAGGCTTGTACTCGCAAGAGAAGGCCTCAGATGGAATTACACTACAGAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS-3UTR GCA 90 bp CCAGTAGCTCCTAGCTTCTCAGCCCTTCTTAGCAGAAGGTTTAGCAAAGAACCCCCGTGTGCTCCAGCTTaGTGTTCTCCAGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: PVAPSFSALLSRRFSKEPPCAPA*CSPGRA
Trigger: GGCTCTTCCTGGAGAACAGCAAGCTGGAGCACACGG...GGGTTCTTTGCTAAACCTTCTGCTAAGAAGGGCTGAGAAGCTAGGAGCTACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp GCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCTGTGGCTTCCCAGTTGACCACTTCCATTaGCTTCACTGGGTAAGGGTT +
Preference number: 4 (lower is better)
Translates to: AYGRGKRRPLSTNPCGFPVDHFH*LHWVRV
Trigger: AACCCTTACCCAGTGAAGGCAATGGAAGTGGTCAAC...TGGGAAGCCACAGGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp GCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCTGTGGCTTCCCAGCCGAAGCAGGAATATaGCAATGTCTTCATTCCCTG +
Preference number: 4 (lower is better)
Translates to: AYGRGKRRPLSTNPCGFPAEAGI*QCLHSL
Trigger: CAGGGAATGAAGACATTGCCATATTCCTGCTTCGGC...TGGGAAGCCACAGGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp GTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGTCAAGCTCTGTGATCTaGCAGGAGATGTCTAGGAGC +
Preference number: 4 (lower is better)
Translates to: VSHVQPLPSRRCDLSSTKSSSVI*QEMSRS
Trigger: GCTCCTAGACATCTCCTGCCAGATCACAGAGCTTGA...CTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp TGCCCAGGTCCTTCTGGGGTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGCTCCAGGTAGTTTTTaGAAGCAGTCAGCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: CPGPSGVSHVQPLPSRRCAPGSF*KQSAFE
Trigger: TTCAAAAGCTGACTGCTTCCAAAAACTACCTGGAGC...GCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAACCCCAGAAGGACCTGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp GCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCTGTGGCTTCCCAAAGGAGTGCATAAATTaGACAGGGAGCTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: AYGRGKRRPLSTNPCGFPKECIN*TGSSVS
Trigger: GCTGACAGAGCTCCCTGTCCAATTTATGCACTCCTT...TGGGAAGCCACAGGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp TACAAGCCTCCAGCCGGCCCAGCTCCTCATAGGACTGGTAGAAGATGTCAAACTGTACTGCTCCATCAGTaGGGTCCCGTCACTTTCTGT +
Preference number: 4 (lower is better)
Translates to: YKPPAGPAPHRTGRRCQTVLLHQ*GPVTFC
Trigger: ACAGAAAGTGACGGGACCCCACTGATGGAGCAGTAC...AGTTTGACATCTTCTACCAGTCCTATGAGGAGCTGGGCCGGCTGGAGGCTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS-3UTR CCA 90 bp CAACTTGCCTTTTCTTCATCTGCTGTCCACGTGGGCAGTAAATGTTTGGCAAATTTCACAGCCACAGGCTaGCCCTGGTACCGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QLAFSSSAVHVGSKCLANFTATG*PWYRAW
Trigger: CCAGGCCCGGTACCAGGGCCAGCCTGTGGCTGTGAA...ATTTGCCAAACATTTACTGCCCACGTGGACAGCAGATGAAGAAAAGGCAAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp CCAGGGACCCTTGCACTGGGCTTTCCGGCCATGACTCTTGAAGGAATCCATTCAGAAGGTGGCAAAGGTTaGGTCTTTCATCTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: PGTLALGFPAMTLEGIHSEGGKG*VFHLAH
Trigger: GTGAGCCAGATGAAAGACCCAACCTTTGCCACCTTC...TGAATGGATTCCTTCAAGAGTCATGGCCGGAAAGCCCAGTGCAAGGGTCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR CCA 90 bp GGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCTCTGAGTCTTCATAGTTaGCAGAGAAAGGCACACTGG +
Preference number: 4 (lower is better)
Translates to: GSWKPMEEARGGLSQPIPLSLHS*QRKAHW
Trigger: CCAGTGTGCCTTTCTCTGCCAACTATGAAGACTCAG...AGGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
3UTR CAA 72 bp GCCATGACTCTTGAAGGAATCCATTCATCTCTGCTATaGGGCAATGCTGCCTGCCCAGGTCCTTCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: AMTLEGIHSSLL*GNAACPGPSGV
Trigger: AACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAATAGCAGAGATGAATGGATTCCTTCAAGAGTCATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp GCAAACAAACAGGGCTTGTGCTCCAGCTGTGTCCAAGTTTATTTTACCAAGTCATCGGGCCTTCTTTCCTaGCCTCCGCAGGCACGTTGC +
Preference number: 4 (lower is better)
Translates to: ANKQGLCSSCVQVYFTKSSGLLS*PPQARC
Trigger: GCAACGTGCCTGCGGAGGTCAGGAAAGAAGGCCCGA...TGACTTGGTAAAATAAACTTGGACACAGCTGGAGCACAAGCCCTGTTTGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp TTTGTCGGGGGAGAAGAATGTAAAGGGAGACCAGGGACCCTTGCACTGGGCTTTTTAGCATCCGTGCTATaGACCGTTGCCAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: FVGGEECKGRPGTLALGFLASVL*TVARSQ
Trigger: TTGGCTTCTGGCAACGGTTCATAGCACGGATGCTAA...AAAGCCCAGTGCAAGGGTCCCTGGTCTCCCTTTACATTCTTCTCCCCCGACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp CCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGGAAGTCCCTCATCTCTaGCTGGCAGATGATTTTAAT +
Preference number: 4 (lower is better)
Translates to: PCAAFAEQEMRSQFHQAGEVPHL*LADDFN
Trigger: ATTAAAATCATCTGCCAGTCAGAGATGAGGGACTTC...CCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp CTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCTGTGGCTTCCCATGCTCCTGACGGAAATCTaGGAAGTTCTTCATGGCATC +
Preference number: 4 (lower is better)
Translates to: LWKRQEEASLNQSLWLPMLLTEI*EVLHGI
Trigger: GATGCCATGAAGAACTTCTCAGATTTCCGTCAGGAG...CATGGGAAGCCACAGGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp AAACAAGATTATGATGTGCAAACAAACAGGGCTTGTGCTCCAGCTGTGTCCAAGCCCAGCACTCCATCATaGGCGCCTGCAGCCGATGGA +
Preference number: 4 (lower is better)
Translates to: KQDYDVQTNRACAPAVSKPSTPS*APAADG
Trigger: TCCATCGGCTGCAGGCGCTCATGATGGAGTGCTGGG...CTTGGACACAGCTGGAGCACAAGCCCTGTTTGTTTGCACATCATAATCTTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp CTATTGGGCAATGCTGCCTGCCCAGGTCCTTCTGGGGTTTCCCATGTGCAGCCTTCTATGAAAAAGAGCTaGAACCAGAAGAGACTGGAC +
Preference number: 4 (lower is better)
Translates to: LLGNAACPGPSGVSHVQPSMKKS*NQKRLD
Trigger: GTCCAGTCTCTTCTGGTTTCAGCTCTTTTTCATAGA...AGGCTGCACATGGGAAACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp GATGTCCAGGATGGTGCAGTCAATGACGAGGAGGCCAGGCCCGTTGCTGTACCACCTGCCACTTTTCTATaGAAAAGAGCTGAAACCAGA +
Preference number: 4 (lower is better)
Translates to: DVQDGAVNDEEARPVAVPPATFL*KRAETR
Trigger: TCTGGTTTCAGCTCTTTTTCATAGAAAAGTGGCAGG...TGGTACAGCAACGGGCCTGGCCTCCTCGTCATTGACTGCACCATCCTGGACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS-3UTR GCA 90 bp AAACAAGATTATGATGTGCAAACAAACAGGGCTTGTGCTCCAGCTGTGTCCAAGATTTCGTCGGAGGACTaGACGCAGGGCAGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: KQDYDVQTNRACAPAVSKISSED*TQGSSP
Trigger: GGGGGAGCTGCCCTGCGTGCAGTCCTCCGACGAAAT...CTTGGACACAGCTGGAGCACAAGCCCTGTTTGTTTGCACATCATAATCTTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp AGACTCTGTAGTGTAATTCCATCTGAGGCCTTCTCTTGCGAGTACAAGCCTCCACCGTGTGCTCCAGCTTaGTGTTCTCCAGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: RLCSVIPSEAFSCEYKPPPCAPA*CSPGRA
Trigger: GGCTCTTCCTGGAGAACAGCAAGCTGGAGCACACGG...TGGAGGCTTGTACTCGCAAGAGAAGGCCTCAGATGGAATTACACTACAGAGTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS-3UTR CCA 90 bp TGTGCTCCAGCTGTGTCCAAGTTTATTTTACCAAGTCATAAACACAGGCCCTTTTGGGGCCTGGTAACCTaGGGTGCCCTCCACACCCAG +
Preference number: 4 (lower is better)
Translates to: CAPAVSKFILPSHKHRPFWGLVT*GALHTQ
Trigger: CTGGGTGTGGAGGGCACCCCAGGTTACCAGGCCCCA...AAAGGGCCTGTGTTTATGACTTGGTAAAATAAACTTGGACACAGCTGGAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp AGACTCTGTAGTGTAATTCCATCTGAGGCCTTCTCTTGCGAGTACAAGCCTCCAGTACTGCACGCTCTCTaGCCTCTCGTTTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: RLCSVIPSEAFSCEYKPPVLHAL*PLVWIC
Trigger: GCAGATCCAAACGAGAGGTCAGAGAGCGTGCAGTAC...TGGAGGCTTGTACTCGCAAGAGAAGGCCTCAGATGGAATTACACTACAGAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp AAACAAGATTATGATGTGCAAACAAACAGGGCTTGTGCTCCAGCTGTGTCCAAGCACTGGAATAGCTGGTaGGGGAGCTGGGCAGACTGG +
Preference number: 4 (lower is better)
Translates to: KQDYDVQTNRACAPAVSKHWNSW*GSWADW
Trigger: CCAGTCTGCCCAGCTCCCTCACCAGCTATTCCAGTG...CTTGGACACAGCTGGAGCACAAGCCCTGTTTGTTTGCACATCATAATCTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp CAACTTGCCTTTTCTTCATCTGCTGTCCACGTGGGCAGTAAATGTTTGGCAAATTTCACAACCTCCAGGTaGCCTCGCTGGCAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: QLAFSSSAVHVGSKCLANFTTSR*PRWQAR
Trigger: CCTGGCTTGCCAGCGAGGGCACCTGGAGGTTGTGAA...ATTTGCCAAACATTTACTGCCCACGTGGACAGCAGATGAAGAAAAGGCAAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp GGTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGTTCTCAGAGAAATCTaGATCCCGAAGGTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: GFPCAAFAEQEMRSQFHQVLREI*IPKVAF
Trigger: AAAAGCCACCTTCGGGATGCAGATTTCTCTGAGAAC...TTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp GCAAACAAACAGGGCTTGTGCTCCAGCTGTGTCCAAGTTTATTTTACCAAGTCAGAGCCTGCTGGTCTCTaGAGCTCCCACTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: ANKQGLCSSCVQVYFTKSEPAGL*SSHLVV
Trigger: GACCACCAAGTGGGAGCTCCAGAGACCAGCAGGCTC...TGACTTGGTAAAATAAACTTGGACACAGCTGGAGCACAAGCCCTGTTTGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp CCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGTTGAACTTCTTGATATaGAACCTCTTCACAGCCACA +
Preference number: 4 (lower is better)
Translates to: PMCSLCRAGDAISVPPSWLNFLI*NLFTAT
Trigger: TGTGGCTGTGAAGAGGTTCCATATCAAGAAGTTCAA...CCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR CCA 90 bp AGGTGGCTGAGTGGTACATCACTAAGCAATTGGCCTTGTCGTCGAGGCACCAGACTGAGAAGTTCTTCATaGCATCCATGGCTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: RWLSGTSLSNWPCRRGTRLRSSS*HPWLSG
Trigger: ACCTGAGAGCCATGGATGCCATGAAGAACTTCTCAG...TCTGGTGCCTCGACGACAAGGCCAATTGCTTAGTGATGTACCACTCAGCCACCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS-3UTR CCA 90 bp AGACTCTGTAGTGTAATTCCATCTGAGGCCTTCTCTTGCGAGTACAAGCCTCCAAGGCATGCAGCATGCTaGCCTCCTGACGGAAATCTG +
Preference number: 4 (lower is better)
Translates to: RLCSVIPSEAFSCEYKPPRHAAC*PPDGNL
Trigger: CAGATTTCCGTCAGGAGGCCAGCATGCTGCATGCCT...TGGAGGCTTGTACTCGCAAGAGAAGGCCTCAGATGGAATTACACTACAGAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS-3UTR CCA 90 bp TTGTGCCCATACACCCTGTTAACAACTTGCCTTTTCTTCATCTGCTGTCCACGTCAGGCCCCTTTGAGGTaGTTTTGTGACTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LCPYTLLTTCLFFICCPRQAPLR*FCDCLG
Trigger: CCCCAGGCAGTCACAAAACCACCTCAAAGGGGCCTG...ACGTGGACAGCAGATGAAGAAAAGGCAAGTTGTTAACAGGGTGTATGGGCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
3UTR CAA 72 bp TTTCTCTGGGCCCAGAGATTGGGTTTCTCCTTCCTTTaGTCGGGGGAGAAGAATGTAAAGGGAGACCAGGGA +
Preference number: 4 (lower is better)
Translates to: FLWAQRLGFSFL*SGEKNVKGDQG
Trigger: TCCCTGGTCTCCCTTTACATTCTTCTCCCCCGACAAAAGGAAGGAGAAACCCAATCTCTGGGCCCAGAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
3UTR CAA 72 bp ATGGTCCCCGTTGTGCCCATACACCCTGTTAACAACTaGCCTTTTCTTCATCTGCTGTCCACGTGGGCAGTA +
Preference number: 4 (lower is better)
Translates to: MVPVVPIHPVNN*PFLHLLSTWAV
Trigger: TACTGCCCACGTGGACAGCAGATGAAGAAAAGGCAAGTTGTTAACAGGGTGTATGGGCACAACGGGGACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp TTGTGCCCATACACCCTGTTAACAACTTGCCTTTTCTTCATCTGCTGTCCACGTCTGAGGATTCCACACTaGGGTAGCCCCCATCGAAAG +
Preference number: 4 (lower is better)
Translates to: LCPYTLLTTCLFFICCPRLRIPH*GSPHRK
Trigger: CTTTCGATGGGGGCTACCTCAGTGTGGAATCCTCAG...ACGTGGACAGCAGATGAAGAAAAGGCAAGTTGTTAACAGGGTGTATGGGCACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp TTGTGCCCATACACCCTGTTAACAACTTGCCTTTTCTTCATCTGCTGTCCACGTGTGTCCAAAATGCGCTaGCACCACAGCTGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: LCPYTLLTTCLFFICCPRVSKMR*HHSWVV
Trigger: GACAACCCAGCTGTGGTGGCAGCGCATTTTGGACAC...ACGTGGACAGCAGATGAAGAAAAGGCAAGTTGTTAACAGGGTGTATGGGCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp CGGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCATTCCAGGGCATTTTTaGAGGCTTTACAACATTTCA +
Preference number: 4 (lower is better)
Translates to: RLLEAYGRGKRRPLSTNPIPGHF*RLYNIS
Trigger: TGAAATGTTGTAAAGCCTCCAAAAATGCCCTGGAAT...GGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp GCAAACAAACAGGGCTTGTGCTCCAGCTGTGTCCAAGTTTATTTTACCAAGTCATCAGTTCCAGAACGCTaGCGCCCTCTGGTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: ANKQGLCSSCVQVYFTKSSVPER*RPLVVN
Trigger: GTTCACCACCAGAGGGCGCCAGCGTTCTGGAACTGA...TGACTTGGTAAAATAAACTTGGACACAGCTGGAGCACAAGCCCTGTTTGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp TTGTGCCCATACACCCTGTTAACAACTTGCCTTTTCTTCATCTGCTGTCCACGTAGGCATGCAGCATGCTaGCCTCCTGACGGAAATCTG +
Preference number: 4 (lower is better)
Translates to: LCPYTLLTTCLFFICCPRRHAAC*PPDGNL
Trigger: CAGATTTCCGTCAGGAGGCCAGCATGCTGCATGCCT...ACGTGGACAGCAGATGAAGAAAAGGCAAGTTGTTAACAGGGTGTATGGGCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp TTGTGCCCATACACCCTGTTAACAACTTGCCTTTTCTTCATCTGCTGTCCACGTGGAACTCATTCTTCCTaGCGGCATAGTTCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: LCPYTLLTTCLFFICCPRGTHSS*RHSSPG
Trigger: ACCCGGAGAACTATGCCGTCAGGAAGAATGAGTTCC...ACGTGGACAGCAGATGAAGAAAAGGCAAGTTGTTAACAGGGTGTATGGGCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp CTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCTGTGGCTTCCCATGTTGCAGGAGATCTCATaGAAGTGTTTGAAAGTGATG +
Preference number: 4 (lower is better)
Translates to: LWKRQEEASLNQSLWLPMLQEIS*KCLKVM
Trigger: CATCACTTTCAAACACTTGCATGAGATCTCCTGCAA...CATGGGAAGCCACAGGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp TGTGCTCCAGCTGTGTCCAAGTTTATTTTACCAAGTCATAAACACAGGCCCTTTCACACCAGTACATACTaGGTGGCCGCTGTGACGTGC +
Preference number: 4 (lower is better)
Translates to: CAPAVSKFILPSHKHRPFHTSTY*VAAVTC
Trigger: GCACGTCACAGCGGCCACCCAGTATGTACTGGTGTG...AAAGGGCCTGTGTTTATGACTTGGTAAAATAAACTTGGACACAGCTGGAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp GGGCCTCACACTCCAGGGATTCAGAGCCTTGTGAAACAGGCTGAAAGACTGGGGGAGACAGTTTGTTGCTaGAGATGTCAATTTCAAGTA +
Preference number: 4 (lower is better)
Translates to: GPHTPGIQSLVKQAERLGETVCC*RCQFQV
Trigger: TACTTGAAATTGACATCTCCAGCAACAAACTGTCTC...CCCCAGTCTTTCAGCCTGTTTCACAAGGCTCTGAATCCCTGGAGTGTGAGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp AAACAAGATTATGATGTGCAAACAAACAGGGCTTGTGCTCCAGCTGTGTCCAAGCTACGGACTCAACCTTaGCTTTGGAGCCTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: KQDYDVQTNRACAPAVSKLRTQP*LWSLLV
Trigger: GACCAGCAGGCTCCAAAGCCAAGGTTGAGTCCGTAG...CTTGGACACAGCTGGAGCACAAGCCCTGTTTGTTTGCACATCATAATCTTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp GTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGTCCCTCATCTCTGACTaGCAGATGATTTTAATTCCT +
Preference number: 4 (lower is better)
Translates to: VSHVQPLPSRRCDLSSTKSLISD*QMILIP
Trigger: AGGAATTAAAATCATCTGCCAGTCAGAGATGAGGGA...CTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR TCA 90 bp TGTGCTCCAGCTGTGTCCAAGTTTATTTTACCAAGTCATAAACACAGGCCCTTTGTACTGCACGCTCTCTaGCCTCTCGTTTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: CAPAVSKFILPSHKHRPFVLHAL*PLVWIC
Trigger: GCAGATCCAAACGAGAGGTCAGAGAGCGTGCAGTAC...AAAGGGCCTGTGTTTATGACTTGGTAAAATAAACTTGGACACAGCTGGAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp AAACAAGATTATGATGTGCAAACAAACAGGGCTTGTGCTCCAGCTGTGTCCAAGCTCGTGTCTGGAAAGTaGAGCAGGGTCCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: KQDYDVQTNRACAPAVSKLVSGK*SRVPVS
Trigger: AGAAACTGGGACCCTGCTGCACTTTCCAGACACGAG...CTTGGACACAGCTGGAGCACAAGCCCTGTTTGTTTGCACATCATAATCTTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp TTTGTCGGGGGAGAAGAATGTAAAGGGAGACCAGGGACCCTTGCACTGGGCTTTCCCATTCTCACTTCCTaGCACTTTTCTATGAAAAAG +
Preference number: 4 (lower is better)
Translates to: FVGGEECKGRPGTLALGFPILTS*HFSMKK
Trigger: CTTTTTCATAGAAAAGTGGCAGGAAGTGAGAATGGG...AAAGCCCAGTGCAAGGGTCCCTGGTCTCCCTTTACATTCTTCTCCCCCGACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS-3UTR CCA 90 bp TTTGTCGGGGGAGAAGAATGTAAAGGGAGACCAGGGACCCTTGCACTGGGCTTTTTGAACTTCTTGATATaGAACCTCTTCACAGCCACA +
Preference number: 4 (lower is better)
Translates to: FVGGEECKGRPGTLALGFLNFLI*NLFTAT
Trigger: TGTGGCTGTGAAGAGGTTCCATATCAAGAAGTTCAA...AAAGCCCAGTGCAAGGGTCCCTGGTCTCCCTTTACATTCTTCTCCCCCGACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR GCA 90 bp AATTCTAGAAAAGGTTCAGTAACCCGAGCCAAATACAGTCTCACATTCAAACGTGTGTTAGCCATTGGGTaGCGCATGCTGTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: NSRKGSVTRAKYSLTFKRVLAIG*RMLWVS
Trigger: GGACACCCACAGCATGCGGCACCCAATGGCTAACAC...ACGTTTGAATGTGAGACTGTATTTGGCTCGGGTTACTGAACCTTTTCTAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp ATTTATAAAATGGTCCCCGTTGTGCCCATACACCCTGTTAACAACTTGCCTTTTTTCTCACCCTCCGTGTaGTCCAGCTTGCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: IYKMVPVVPIHPVNNLPFFSPSV*SSLLFS
Trigger: GGAGAACAGCAAGCTGGAGCACACGGAGGGTGAGAA...AAAAGGCAAGTTGTTAACAGGGTGTATGGGCACAACGGGGACCATTTTATAAAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp CCAGTAGCTCCTAGCTTCTCAGCCCTTCTTAGCAGAAGGTTTAGCAAAGAACCCTTTCATTTGCAAAGCTaGACACTACGGTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: PVAPSFSALLSRRFSKEPFHLQS*TLRCPL
Trigger: CAAAGGACACCGTAGTGTGCAGCTTTGCAAATGAAA...GGGTTCTTTGCTAAACCTTCTGCTAAGAAGGGCTGAGAAGCTAGGAGCTACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp TTGTGCCCATACACCCTGTTAACAACTTGCCTTTTCTTCATCTGCTGTCCACGTCAGGGCAACTTCAGATaGGACCATTTCACACGAAGT +
Preference number: 4 (lower is better)
Translates to: LCPYTLLTTCLFFICCPRQGNFR*DHFTRS
Trigger: ACTTCGTGTGAAATGGTCCCATCTGAAGTTGCCCTG...ACGTGGACAGCAGATGAAGAAAAGGCAAGTTGTTAACAGGGTGTATGGGCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp TGTGCTCCAGCTGTGTCCAAGTTTATTTTACCAAGTCATAAACACAGGCCCTTTCAGCACAACGGCATTTaGGGCCTTGGCCTCAATGTT +
Preference number: 4 (lower is better)
Translates to: CAPAVSKFILPSHKHRPFQHNGI*GLGLNV
Trigger: AACATTGAGGCCAAGGCCCCAAATGCCGTTGTGCTG...AAAGGGCCTGTGTTTATGACTTGGTAAAATAAACTTGGACACAGCTGGAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp AATTCTAGAAAAGGTTCAGTAACCCGAGCCAAATACAGTCTCACATTCAAACGTCGGGGATGCAGAACTTaGACCTGTTGGCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: NSRKGSVTRAKYSLTFKRRGCRT*TCWLCG
Trigger: CCCACACAGCCAACAGGTCCAAGTTCTGCATCCCCG...ACGTTTGAATGTGAGACTGTATTTGGCTCGGGTTACTGAACCTTTTCTAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp AATTCTAGAAAAGGTTCAGTAACCCGAGCCAAATACAGTCTCACATTCAAACGTATGACTCTGCCCCGCTaGGCACCTGAATCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: NSRKGSVTRAKYSLTFKRMTLPR*APESFS
Trigger: GGAGAAGGATTCAGGTGCCCAGCGGGGCAGAGTCAT...ACGTTTGAATGTGAGACTGTATTTGGCTCGGGTTACTGAACCTTTTCTAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp ATTTATAAAATGGTCCCCGTTGTGCCCATACACCCTGTTAACAACTTGCCTTTTGTAACCTGGAGCAGATaGTTTCGTCGGAGGACTGCA +
Preference number: 4 (lower is better)
Translates to: IYKMVPVVPIHPVNNLPFVTWSR*FRRRTA
Trigger: TGCAGTCCTCCGACGAAATCATCTGCTCCAGGTTAC...AAAAGGCAAGTTGTTAACAGGGTGTATGGGCACAACGGGGACCATTTTATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp AATTCTAGAAAAGGTTCAGTAACCCGAGCCAAATACAGTCTCACATTCAAACGTGCCCAAGTAGAGCTCTaGGAGGTTCTTCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: NSRKGSVTRAKYSLTFKRAQVEL*EVLQQA
Trigger: TGCCTGCTGAAGAACCTCTCAGAGCTCTACTTGGGC...ACGTTTGAATGTGAGACTGTATTTGGCTCGGGTTACTGAACCTTTTCTAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp ATTTATAAAATGGTCCCCGTTGTGCCCATACACCCTGTTAACAACTTGCCTTTTCTGAGGTCTTCCGCTTaGATCACCCCATTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: IYKMVPVVPIHPVNNLPFLRSSA*ITPFFA
Trigger: GGCAAAGAATGGGGTGATCCAAGCGGAAGACCTCAG...AAAAGGCAAGTTGTTAACAGGGTGTATGGGCACAACGGGGACCATTTTATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp TGTGCTCCAGCTGTGTCCAAGTTTATTTTACCAAGTCATAAACACAGGCCCTTTACCACAGTGTACTCCTaGCTCTGGGATGAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: CAPAVSKFILPSHKHRPFTTVYS*LWDEKK
Trigger: CTTCTTCTCATCCCAGAGCCAGGAGTACACTGTGGT...AAAGGGCCTGTGTTTATGACTTGGTAAAATAAACTTGGACACAGCTGGAGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp ATGTTTGGCAAATACATAATTCAGTATAAGTCCCATACGATGGGATTTCACAACTCTGCTTTGCGCAGCTaGGCACGCAGGAAAGACAGT +
Preference number: 4 (lower is better)
Translates to: MFGKYIIQYKSHTMGFHNSALRS*ARRKDS
Trigger: ACTGTCTTTCCTGCGTGCTCAGCTGCGCAAAGCAGA...GTTGTGAAATCCCATCGTATGGGACTTATACTGAATTATGTATTTGCCAAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp TGTGCTCCAGCTGTGTCCAAGTTTATTTTACCAAGTCATAAACACAGGCCCTTTAGAGACTTGAAGGAGTaGATAAATTGGACAGGGAGC +
Preference number: 4 (lower is better)
Translates to: CAPAVSKFILPSHKHRPFRDLKE*INWTGS
Trigger: GCTCCCTGTCCAATTTATGCACTCCTTCAAGTCTCT...AAAGGGCCTGTGTTTATGACTTGGTAAAATAAACTTGGACACAGCTGGAGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR GCA 90 bp ATTTATAAAATGGTCCCCGTTGTGCCCATACACCCTGTTAACAACTTGCCTTTTGCCCATCTTCATTTTTaGCGAGCTGGTTTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: IYKMVPVVPIHPVNNLPFAHLHF*RAGFWR
Trigger: TCTCCAGAAACCAGCTCGGCAAAAATGAAGATGGGC...AAAAGGCAAGTTGTTAACAGGGTGTATGGGCACAACGGGGACCATTTTATAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp AATTCTAGAAAAGGTTCAGTAACCCGAGCCAAATACAGTCTCACATTCAAACGTTCATTTTTGCCGAGCTaGTTTCTGGAGAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: NSRKGSVTRAKYSLTFKRSFLPS*FLERSR
Trigger: CCTGGACCTCTCCAGAAACCAGCTCGGCAAAAATGA...ACGTTTGAATGTGAGACTGTATTTGGCTCGGGTTACTGAACCTTTTCTAGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp GCAAACAAACAGGGCTTGTGCTCCAGCTGTGTCCAAGTTTATTTTACCAAGTCAGGAACAGCATCAAGATaGTTGTCATTCAGACAAAGG +
Preference number: 4 (lower is better)
Translates to: ANKQGLCSSCVQVYFTKSGTASR*LSFRQR
Trigger: CCTTTGTCTGAATGACAACCATCTTGATGCTGTTCC...TGACTTGGTAAAATAAACTTGGACACAGCTGGAGCACAAGCCCTGTTTGTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp ATGTTTGGCAAATACATAATTCAGTATAAGTCCCATACGATGGGATTTCACAACTCTGTGAAGAAGCACTaGTTGACCGTGGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: MFGKYIIQYKSHTMGFHNSVKKH*LTVAML
Trigger: CAGCATGGCCACGGTCAATCAGTGCTTCTTCACAGA...GTTGTGAAATCCCATCGTATGGGACTTATACTGAATTATGTATTTGCCAAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR TCA 90 bp TGTGCTCCAGCTGTGTCCAAGTTTATTTTACCAAGTCATAAACACAGGCCCTTTGAAGTCCCTCATCTCTaGCTGGCAGATGATTTTAAT +
Preference number: 4 (lower is better)
Translates to: CAPAVSKFILPSHKHRPFEVPHL*LADDFN
Trigger: ATTAAAATCATCTGCCAGTCAGAGATGAGGGACTTC...AAAGGGCCTGTGTTTATGACTTGGTAAAATAAACTTGGACACAGCTGGAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp AAACAAGATTATGATGTGCAAACAAACAGGGCTTGTGCTCCAGCTGTGTCCAAGTCCCTCATCTCTGACTaGCAGATGATTTTAATTCCT +
Preference number: 4 (lower is better)
Translates to: KQDYDVQTNRACAPAVSKSLISD*QMILIP
Trigger: AGGAATTAAAATCATCTGCCAGTCAGAGATGAGGGA...CTTGGACACAGCTGGAGCACAAGCCCTGTTTGTTTGCACATCATAATCTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp ATGTTTGGCAAATACATAATTCAGTATAAGTCCCATACGATGGGATTTCACAACCTGGGAATTCCAACATaGAGGCTGTCTCAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: MFGKYIIQYKSHTMGFHNLGIPT*RLSQFQ
Trigger: CTGGAACTGAGACAGCCTCCATGTTGGAATTCCCAG...GTTGTGAAATCCCATCGTATGGGACTTATACTGAATTATGTATTTGCCAAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CCA 90 bp AATTCTAGAAAAGGTTCAGTAACCCGAGCCAAATACAGTCTCACATTCAAACGTGGGCAATCTCGAACTTaGCAAGGAACTGGAAGTATT +
Preference number: 4 (lower is better)
Translates to: NSRKGSVTRAKYSLTFKRGQSRT*QGTGSI
Trigger: AATACTTCCAGTTCCTTGCCAAGTTCGAGATTGCCC...ACGTTTGAATGTGAGACTGTATTTGGCTCGGGTTACTGAACCTTTTCTAGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS TCA 90 bp GTGGGCTCCGTCGGCAGCTCCACGCGCTTCTCAGTGAGCAGGAACTaGACAGTCTCCAGATCCCCGTGGGCTGCCGCGATGCTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: VGSVGSSTRFSVSRN*TVSRSPWAAAMLSS
Trigger: GCTGCTGAGCATCGCGGCAGCCCACGGGGATCTGGAGACTGTTCAGTTCCTGCTCACTGAGAAGCGCGTGGAGCTGCCGACGGAGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS TCA 90 bp AGGCCAGGGGGCGCTTCTCCGGCTTTGTGTCCCAGCACTCCATCATaGGCGCCTGCAGCCGATGGAACTGAACTTCCTCCGGCTGCCCCA +
Preference number: 5 (lower is better)
Translates to: RPGGASPALCPSTPS*APAADGTELPPAAP
Trigger: TGGGGCAGCCGGAGGAAGTTCAGTTCCATCGGCTGCAGGCGCTCATGATGGAGTGCTGGGACACAAAGCCGGAGAAGCGCCCCCTGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR CAA 90 bp CCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGTCCAGGAGTGTGGACTaGCCCTGGCGCGGGGGACCC +
Preference number: 5 (lower is better)
Translates to: PCAAFAEQEMRSQFHQAGSRSVD*PWRGGP
Trigger: GGGTCCCCCGCGCCAGGGCAAGTCCACACTCCTGGA...CCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 90 bp GTGTTTGAAAGTGATGTCCGGGAAGCCCGTAGCCCTGGAGCCCGATaGCGAGCGGCAGAGGGCCAGCACGTAGGCACGCAGGGTTGCTAT +
Preference number: 5 (lower is better)
Translates to: VFESDVREARSPGAR*RAAEGQHVGTQGCY
Trigger: ATAGCAACCCTGCGTGCCTACGTGCTGGCCCTCTGCCGCTCGCCATCGGGCTCCAGGGCTACGGGCTTCCCGGACATCACTTTCAAACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp TGGGGTCACTCTCCCCGGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTAGCCAGAACTGGAGGTaGGCCACGGCTTCCTCTCCC +
Preference number: 5 (lower is better)
Translates to: WGHSPRLLEAYGRGKRRPSQNWR*ATASSP
Trigger: GGGAGAGGAAGCCGTGGCCAACCTCCAGTTCTGGCT...AGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCCGGGGAGAGTGACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS TCA 90 bp TGGCTTTGGAGCCTGCTGGTCTCTGGAGCTCCCACTTGGTGGTCCTaGTGGTGGCTTCACTGTGTGCTAGCTGCGGGGCCTTCCCGGTCT +
Preference number: 5 (lower is better)
Translates to: WLWSLLVSGAPTWWS*WWLHCVLAAGPSRS
Trigger: AGACCGGGAAGGCCCCGCAGCTAGCACACAGTGAAGCCACCATCAGGACCACCAAGTGGGAGCTCCAGAGACCAGCAGGCTCCAAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 90 bp GCTGCGGGGCCTTCCCGGTCTGTAAGATCTCCAGGAGTGTGGACTTaGCCTGGCGCGGGGGACCCACGAGGATCATCTTCATCAGCTTAC +
Preference number: 5 (lower is better)
Translates to: AAGPSRSVRSPGVWT*PGAGDPRGSSSSAY
Trigger: GTAAGCTGATGAAGATGATCCTCGTGGGTCCCCCGCGCCAGGGCAAGTCCACACTCCTGGAGATCTTACAGACCGGGAAGGCCCCGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 90 bp GCATGCTGGGCCCAGGATGCTTCACAGACAGGGCAGGGTACGTACTaGTCCATCAGTGGGGTCCCGTCACTTTCTGTGGCCGTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: ACWAQDASQTGQGTY*SISGVPSLSVAVRA
Trigger: TGCCCTGACGGCCACAGAAAGTGACGGGACCCCACTGATGGAGCAGTACGTACCCTGCCCTGTCTGTGAAGCATCCTGGGCCCAGCATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CCA 90 bp GTGCTAGCTGCGGGGCCTTCCCGGTCTGTAAGATCTCCAGGAGTGTaGACTTGCCCTGGCGCGGGGGACCCACGAGGATCATCTTCATCA +
Preference number: 5 (lower is better)
Translates to: VLAAGPSRSVRSPGV*TCPGAGDPRGSSSS
Trigger: TGATGAAGATGATCCTCGTGGGTCCCCCGCGCCAGGGCAAGTCCACACTCCTGGAGATCTTACAGACCGGGAAGGCCCCGCAGCTAGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 90 bp TGCTCTACCAGCTGGTCCAGCTGCCTGTCCGTCAGATACTGTACTTaGTCACCCAGACTGCGGCGCTGTTGCTCAGCCAGCACGGCCTCC +
Preference number: 5 (lower is better)
Translates to: CSTSWSSCLSVRYCT*SPRLRRCCSASTAS
Trigger: GGAGGCCGTGCTGGCTGAGCAACAGCGCCGCAGTCTGGGTGACCAAGTACAGTATCTGACGGACAGGCAGCTGGACCAGCTGGTAGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp CCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGGACGTGGAAGATCAGTaGCCGCAGCCCCTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: PCAAFAEQEMRSQFHQAGDVEDQ*PQPLLP
Trigger: GGGCAGGAGGGGCTGCGGCAACTGATCTTCCACGTC...CCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp TGCCCAGGTCCTTCTGGGGTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATGCAGGAGGCCAGGCCCGTaGCTGTACCAGACCTCAGAC +
Preference number: 5 (lower is better)
Translates to: CPGPSGVSHVQPLPSRRCRRPGP*LYQTSD
Trigger: GTCTGAGGTCTGGTACAGCAACGGGCCTGGCCTCCT...GCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAACCCCAGAAGGACCTGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS TCA 90 bp CCTCCGGCTGCCCCAGAACTGGGCGGATGCCCTTGGACAACTTCTTaGCAATCTGAAGTTGGTGGTGGCCCAGTGCAGGACGCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: PPAAPELGGCPWTTS*QSEVGGGPVQDAVL
Trigger: CAGGACAGCGTCCTGCACTGGGCCACCACCAACTTCAGATTGTCAAGAAGTTGTCCAAGGGCATCCGCCCAGTTCTGGGGCAGCCGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS TCA 90 bp TTTGTGTCCCAGCACTCCATCATGAGCGCCTGCAGCCGATGGAACTaGACTTCCTCCGGCTGCCCCAGAACTGGGCGGATGCCCTTGGAC +
Preference number: 5 (lower is better)
Translates to: FVSQHSIMSACSRWN*TSSGCPRTGRMPLD
Trigger: GTCCAAGGGCATCCGCCCAGTTCTGGGGCAGCCGGAGGAAGTTCAGTTCCATCGGCTGCAGGCGCTCATGATGGAGTGCTGGGACACAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CCA 90 bp TTCACGTACTACTTCGGCGTGTCCAAAATGCGCTGCCACCACAGCTaGGTTGTCATCGGTGGGCTCCGTCGGCAGCTCCACGCGCTTCTC +
Preference number: 5 (lower is better)
Translates to: FTYYFGVSKMRCHHS*VVIGGLRRQLHALL
Trigger: GAGAAGCGCGTGGAGCTGCCGACGGAGCCCACCGATGACAACCCAGCTGTGGTGGCAGCGCATTTTGGACACGCCGAAGTAGTACGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 90 bp TGCCCTCGCTGGCAAGCCAGGGCCAGCATCCAGTTCAGTAGCCGCTaGGGGGTACAGGGACCTGGCAAGGACTCTAGTAGTTCACGTACT +
Preference number: 5 (lower is better)
Translates to: CPRWQARASIQFSSR*GVQGPGKDSSSSRT
Trigger: AGTACGTGAACTACTAGAGTCCTTGCCAGGTCCCTGTACCCCCCAGCGGCTACTGAACTGGATGCTGGCCCTGGCTTGCCAGCGAGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 90 bp GGGAGCGAAGGCAGGCAGTTGGCAGACAGGTCAAGCTCTGTGATCTaGCAGGAGATGTCTAGGAGCCAGTCCAGGTCCACCCAGGGCAAC +
Preference number: 5 (lower is better)
Translates to: GSEGRQLADRSSSVI*QEMSRSQSRSTQGN
Trigger: GTTGCCCTGGGTGGACCTGGACTGGCTCCTAGACATCTCCTGCCAGATCACAGAGCTTGACCTGTCTGCCAACTGCCTGCCTTCGCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 90 bp CCAGGATGCTTCACAGACAGGGCAGGGTACGTACTGCTCCATCAGTaGGGTCCCGTCACTTTCTGTGGCCGTCAGGGCAGGGAACCACTG +
Preference number: 5 (lower is better)
Translates to: PGCFTDRAGYVLLHQ*GPVTFCGRQGREPL
Trigger: CAGTGGTTCCCTGCCCTGACGGCCACAGAAAGTGACGGGACCCCACTGATGGAGCAGTACGTACCCTGCCCTGTCTGTGAAGCATCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CCA 90 bp TTGAGACTGCCCAGCGGGGCCAGCTCCAAGGCGAAGCAGAGCGGGTaGATGCTGATGCCGATGAGTGACACGATGCAAGGATGCTGCAAG +
Preference number: 5 (lower is better)
Translates to: LRLPSGASSKAKQSG*MLMPMSDTMQGCCK
Trigger: CTTGCAGCATCCTTGCATCGTGTCACTCATCGGCATCAGCATCCACCCGCTCTGCTTCGCCTTGGAGCTGGCCCCGCTGGGCAGTCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR CAA 90 bp TGGGGTCACTCTCCCCGGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTGTCCAGGGTCTTGAGTaGGGTGCAGGTCCACTTCTC +
Preference number: 5 (lower is better)
Translates to: WGHSPRLLEAYGRGKRRPVQGLE*GAGPLL
Trigger: GAGAAGTGGACCTGCACCCAACTCAAGACCCTGGAC...AGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCCGGGGAGAGTGACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp TGCCACAGGAAACACAGCCACGAGTCCGTCAGCCAGGCCTGCCAGCACCAGGAATCCGTGTGCTCCAGCTaGCTGTTCTCCAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: CHRKHSHESVSQACQHQESVCSS*LFSRKS
Trigger: GCTCTTCCTGGAGAACAGCAAGCTGGAGCACACGGA...TTCCTGGTGCTGGCAGGCCTGGCTGACGGACTCGTGGCTGTGTTTCCTGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS-3UTR CAA 90 bp CGAGTCCTGGTGGGTGAGGATCTGCGTGCCCAGCTCCTCGCTGTACATGATGCTGGCGCTTCTCCGGCTTaGTGTCCCAGCACTCCATCA +
Preference number: 5 (lower is better)
Translates to: RVLVGEDLRAQLLAVHDAGASPA*CPSTPS
Trigger: TGATGGAGTGCTGGGACACAAAGCCGGAGAAGCGCC...AGCATCATGTACAGCGAGGAGCTGGGCACGCAGATCCTCACCCACCAGGACTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS TCA 90 bp AGGTTCCAGACCACCACATACAGCGCCTTGTCTGTGAAGAAGCACTaGTTGACCGTGGCCATGCTGGCCGGACCCCCGATGTCCCAGACG +
Preference number: 5 (lower is better)
Translates to: RFQTTTYSALSVKKH*LTVAMLAGPPMSQT
Trigger: CGTCTGGGACATCGGGGGTCCGGCCAGCATGGCCACGGTCAATCAGTGCTTCTTCACAGACAAGGCGCTGTATGTGGTGGTCTGGAACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS TCA 90 bp CAGCTCCAAGGCGAAGCAGAGCGGGTGGATGCTGATGCCGATGAGTaGCACGATGCAAGGATGCTGCAAGGCATGCAGCATGCTGGCCTC +
Preference number: 5 (lower is better)
Translates to: QLQGEAERVDADADE*HDARMLQGMQHAGL
Trigger: GAGGCCAGCATGCTGCATGCCTTGCAGCATCCTTGCATCGTGTCACTCATCGGCATCAGCATCCACCCGCTCTGCTTCGCCTTGGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CCA 90 bp GGGGCCTTCCCGGTCTGTAAGATCTCCAGGAGTGTGGACTTGCCCTaGCGCGGGGGACCCACGAGGATCATCTTCATCAGCTTACACTTC +
Preference number: 5 (lower is better)
Translates to: GAFPVCKISRSVDLP*RGGPTRIIFISLHF
Trigger: GAAGTGTAAGCTGATGAAGATGATCCTCGTGGGTCCCCCGCGCCAGGGCAAGTCCACACTCCTGGAGATCTTACAGACCGGGAAGGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 90 bp ACAACGGCATTTGGGGCCTTGGCCTCAATGTTGAGCAGCCAGAACTaGAGGTTGGCCACGGCTTCCTCTCCCAGTGCCAGGTTCCAGACC +
Preference number: 5 (lower is better)
Translates to: TTAFGALASMLSSQN*RLATASSPSARFQT
Trigger: GGTCTGGAACCTGGCACTGGGAGAGGAAGCCGTGGCCAACCTCCAGTTCTGGCTGCTCAACATTGAGGCCAAGGCCCCAAATGCCGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp CCATTCATCTCTGCTATTGGGCAATGCTGCCTGCCCAGGTCCTTCTGGGGTTTCGCCACCACAGCTGGGTaGTCATCGGTGGGCTCCGTC +
Preference number: 5 (lower is better)
Translates to: PFISAIGQCCLPRSFWGFATTAG*SSVGSV
Trigger: GACGGAGCCCACCGATGACAACCCAGCTGTGGTGGC...GAAACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAATAGCAGAGATGAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp GGGGTCCCAGCCCTCCTCCCACCTTACCCTGAACTGCTCCTCAACCAAGACTCTTGTGCCACTGCCACCTaGGCCCAGAATGCTGTTCTC +
Preference number: 5 (lower is better)
Translates to: GVPALLPPYPELLLNQDSCATAT*AQNAVL
Trigger: GAGAACAGCATTCTGGGCCAAGGTGGCAGTGGCACA...AGAGTCTTGGTTGAGGAGCAGTTCAGGGTAAGGTGGGAGGAGGGCTGGGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR CAA 90 bp CCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGAGGAGCAGCTTTCTTTaGGGGTGCCCCGTGCCACAG +
Preference number: 5 (lower is better)
Translates to: PCAAFAEQEMRSQFHQAGRSSFL*GCPVPQ
Trigger: CTGTGGCACGGGGCACCCCAAAAGAAAGCTGCTCCT...CCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp TGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTCACACTCCAGGTCGGGGATGCAGAACTaGGACCTGTTGGCTGTGTGG +
Preference number: 5 (lower is better)
Translates to: CRAGDAISVPPSWASHSRSGMQN*DLLAVW
Trigger: CCACACAGCCAACAGGTCCAAGTTCTGCATCCCCGA...CCTGGAGTGTGAGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS TCA 90 bp CGTAGGAGAACATATCTACCTTCTCGTCATACACGATGCGAGGCCTaGTCTCTGGGGCCTGGTAACCTGGGGTGCCCTCCACACCCAGGG +
Preference number: 5 (lower is better)
Translates to: RRRTYLPSRHTRCEA*SLGPGNLGCPPHPG
Trigger: CCCTGGGTGTGGAGGGCACCCCAGGTTACCAGGCCCCAGAGATCAGGCCTCGCATCGTGTATGACGAGAAGGTAGATATGTTCTCCTACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS TCA 90 bp TGCCCCAGAACTGGGCGGATGCCCTTGGACAACTTCTTGACAATCTaGAGTTGGTGGTGGCCCAGTGCAGGACGCTGTCCTGACAGCAGC +
Preference number: 5 (lower is better)
Translates to: CPRTGRMPLDNFLTI*SWWWPSAGRCPDSS
Trigger: GCTGCTGTCAGGACAGCGTCCTGCACTGGGCCACCACCAACTTCAGATTGTCAAGAAGTTGTCCAAGGGCATCCGCCCAGTTCTGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS GCA 90 bp GGCAAGGACTCTAGTAGTTCACGTACTACTTCGGCGTGTCCAAAATaGGCTGCCACCACAGCTGGGTTGTCATCGGTGGGCTCCGTCGGC +
Preference number: 5 (lower is better)
Translates to: GKDSSSSRTTSACPK*AATTAGLSSVGSVG
Trigger: GCCGACGGAGCCCACCGATGACAACCCAGCTGTGGTGGCAGCGCATTTTGGACACGCCGAAGTAGTACGTGAACTACTAGAGTCCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 90 bp ACCTCCGCAGGCACGTTGCTAATGTTCAGATCTTCAATGTCCAGTTaGCAGAGGTTCCCCAGCTGGCCTAGCTCCGGAGGGAGCTCTCGG +
Preference number: 5 (lower is better)
Translates to: TSAGTLLMFRSSMSS*QRFPSWPSSGGSSR
Trigger: CCGAGAGCTCCCTCCGGAGCTAGGCCAGCTGGGGAACCTCTGGCAACTGGACATTGAAGATCTGAACATTAGCAACGTGCCTGCGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 90 bp AGCTCCCACTTGGTGGTCCTGATGGTGGCTTCACTGTGTGCTAGCTaGGGGGCCTTCCCGGTCTGTAAGATCTCCAGGAGTGTGGACTTG +
Preference number: 5 (lower is better)
Translates to: SSHLVVLMVASLCAS*GAFPVCKISRSVDL
Trigger: CAAGTCCACACTCCTGGAGATCTTACAGACCGGGAAGGCCCCGCAGCTAGCACACAGTGAAGCCACCATCAGGACCACCAAGTGGGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 90 bp TTAAACACCCGCTGGATGGTGTTAGCCATTGGGTGCCGCATGCTGTaGGTGTCCAGCCCAGGCTTGGATGGAAGGAGGTGTGGTAGGAGG +
Preference number: 5 (lower is better)
Translates to: LNTRWMVLAIGCRML*VSSPGLDGRRCGRR
Trigger: CCTCCTACCACACCTCCTTCCATCCAAGCCTGGGCTGGACACCCACAGCATGCGGCACCCAATGGCTAACACCATCCAGCGGGTGTTTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 90 bp CAGGGCAGCATGTACATGAAGGTGGCAAAGGTTGGGTCTTTCATCTaGCTCACCACGGACAAGGCCAGGGGGCGCTTCTCCGGCTTTGTG +
Preference number: 5 (lower is better)
Translates to: QGSMYMKVAKVGSFI*LTTDKARGRFSGFV
Trigger: CACAAAGCCGGAGAAGCGCCCCCTGGCCTTGTCCGTGGTGAGCCAGATGAAAGACCCAACCTTTGCCACCTTCATGTACATGCTGCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CCA 90 bp CGACTGCTTCCCACAGGGCAGCATGTACATGAAGGTGGCAAAGGTTaGGTCTTTCATCTGGCTCACCACGGACAAGGCCAGGGGGCGCTT +
Preference number: 5 (lower is better)
Translates to: RLLPTGQHVHEGGKG*VFHLAHHGQGQGAL
Trigger: AAGCGCCCCCTGGCCTTGTCCGTGGTGAGCCAGATGAAAGACCCAACCTTTGCCACCTTCATGTACATGCTGCCCTGTGGGAAGCAGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CCA 90 bp AGACTGGACTCCTCCTTCCCATCCCAGAACACCACAGTGTACTCCTaGCTCTGGGATGAGAAGAAGGCCGACTGCTTCCCACAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: RLDSSFPSQNTTVYS*LWDEKKADCFPQGS
Trigger: GCTGCCCTGTGGGAAGCAGTCGGCCTTCTTCTCATCCCAGAGCCAGGAGTACACTGTGGTGTTCTGGGATGGGAAGGAGGAGTCCAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS-3UTR CAA 90 bp CCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCAGCACAACGGCATTaGGGGCCTTGGCCTCAATGT +
Preference number: 5 (lower is better)
Translates to: PCAAFAEQEMRSQFHQAGPAQRH*GPWPQC
Trigger: ACATTGAGGCCAAGGCCCCAAATGCCGTTGTGCTGG...CCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp GGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCTGGATCACCCCATTCTTaGCCACTGACCGCGAGCCCT +
Preference number: 5 (lower is better)
Translates to: GSWKPMEEARGGLSQPIPGSPHS*PLTASP
Trigger: AGGGCTCGCGGTCAGTGGCAAAGAATGGGGTGATCC...AGGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp TGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTTGTGCCACTGCCACCTaGGCCCAGAATGCTGTTCTC +
Preference number: 5 (lower is better)
Translates to: CAAFAEQEMRSQFHQAGPCATAT*AQNAVL
Trigger: GAGAACAGCATTCTGGGCCAAGGTGGCAGTGGCACA...AGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR CAA 90 bp TGGGGTCACTCTCCCCGGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTACTGGGCGGATGCCCTaGGACAACTTCTTGACAATC +
Preference number: 5 (lower is better)
Translates to: WGHSPRLLEAYGRGKRRPTGRMP*DNFLTI
Trigger: GATTGTCAAGAAGTTGTCCAAGGGCATCCGCCCAGT...AGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCCGGGGAGAGTGACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp CCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGTGTCCCTGAGAGGATaGGGGTCCCCACAGAAGTAC +
Preference number: 5 (lower is better)
Translates to: PMCSLCRAGDAISVPPSWVSLRG*GSPQKY
Trigger: GTACTTCTGTGGGGACCCCAATCCTCTCAGGGACAC...CCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 90 bp TCACAAACCCCTCTGAGTAGGTCTCGGGCTCGGGAGAGGTTCCTCTaGTTGTACGCAGTGTGGATTTCTTCCATGCTGGGGCACTGCACC +
Preference number: 5 (lower is better)
Translates to: SQTPLSRSRARERFL*LYAVWISSMLGHCT
Trigger: GGTGCAGTGCCCCAGCATGGAAGAAATCCACACTGCGTACAAGCAGAGGAACCTCTCCCGAGCCCGAGACCTACTCAGAGGGGTTTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 90 bp GTTGAGCAGCCAGAACTGGAGGTTGGCCACGGCTTCCTCTCCCAGTaGCAGGTTCCAGACCACCACATACAGCGCCTTGTCTGTGAAGAA +
Preference number: 5 (lower is better)
Translates to: VEQPELEVGHGFLSQ*QVPDHHIQRLVCEE
Trigger: TTCTTCACAGACAAGGCGCTGTATGTGGTGGTCTGGAACCTGGCACTGGGAGAGGAAGCCGTGGCCAACCTCCAGTTCTGGCTGCTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 90 bp TGCCGCAGCCCCTCCTGCCCTTCCAGATTCTTGCAGGAGATCTCATaGAAGTGTTTGAAAGTGATGTCCGGGAAGCCCGTAGCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: CRSPSCPSRFLQEIS*KCLKVMSGKPVALE
Trigger: CTCCAGGGCTACGGGCTTCCCGGACATCACTTTCAAACACTTGCATGAGATCTCCTGCAAGAATCTGGAAGGGCAGGAGGGGCTGCGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 90 bp ACGAAGCTCATCTTAAACACCCGCTGGATGGTGTTAGCCATTGGGTaGCGCATGCTGTGGGTGTCCAGCCCAGGCTTGGATGGAAGGAGG +
Preference number: 5 (lower is better)
Translates to: TKLILNTRWMVLAIG*RMLWVSSPGLDGRR
Trigger: CCTCCTTCCATCCAAGCCTGGGCTGGACACCCACAGCATGCGGCACCCAATGGCTAACACCATCCAGCGGGTGTTTAAGATGAGCTTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 90 bp CTAATGTTCAGATCTTCAATGTCCAGTTGCCAGAGGTTCCCCAGCTaGCCTAGCTCCGGAGGGAGCTCTCGGAGGCCAGGGTTATTGCCC +
Preference number: 5 (lower is better)
Translates to: LMFRSSMSSCQRFPS*PSSGGSSRRPGLLP
Trigger: GGGCAATAACCCTGGCCTCCGAGAGCTCCCTCCGGAGCTAGGCCAGCTGGGGAACCTCTGGCAACTGGACATTGAAGATCTGAACATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 90 bp AGGCACGAAGCTCATCTTAAACACCCGCTGGATGGTGTTAGCCATTaGGTGCCGCATGCTGTGGGTGTCCAGCCCAGGCTTGGATGGAAG +
Preference number: 5 (lower is better)
Translates to: RHEAHLKHPLDGVSH*VPHAVGVQPRLGWK
Trigger: CTTCCATCCAAGCCTGGGCTGGACACCCACAGCATGCGGCACCCAATGGCTAACACCATCCAGCGGGTGTTTAAGATGAGCTTCGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 90 bp CGTTGCCAGAAGCCAACAGGCACGAAGCTCATCTTAAACACCCGCTaGATGGTGTTAGCCATTGGGTGCCGCATGCTGTGGGTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: RCQKPTGTKLILNTR*MVLAIGCRMLWVSS
Trigger: GCTGGACACCCACAGCATGCGGCACCCAATGGCTAACACCATCCAGCGGGTGTTTAAGATGAGCTTCGTGCCTGTTGGCTTCTGGCAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 90 bp GGCTGGGAAGTCAGTCATGAACAGCTCTGGTACAAGCTCCTGAAGTaGTACTGGGAGGTCTGGGTGTCTGGGGCAGGAGATGAAGTCCCG +
Preference number: 5 (lower is better)
Translates to: GWEVSHEQLWYKLLK*YWEVWVSGAGDEVP
Trigger: CGGGACTTCATCTCCTGCCCCAGACACCCAGACCTCCCAGTACCACTTCAGGAGCTTGTACCAGAGCTGTTCATGACTGACTTCCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CCA 90 bp CATGCAGCATGCTGGCCTCCTGACGGAAATCTGAGAAGTTCTTCATaGCATCCATGGCTCTCAGGTGCCGCAGCATGGTGTCTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: HAACWPPDGNLRSSS*HPWLSGAAAWCLLG
Trigger: CCCCAGCAGACACCATGCTGCGGCACCTGAGAGCCATGGATGCCATGAAGAACTTCTCAGATTTCCGTCAGGAGGCCAGCATGCTGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CCA 90 bp CGCCTGCAGCCGATGGAACTGAACTTCCTCCGGCTGCCCCAGAACTaGGCGGATGCCCTTGGACAACTTCTTGACAATCTGAAGTTGGTG +
Preference number: 5 (lower is better)
Translates to: RLQPMELNFLRLPQN*ADALGQLLDNLKLV
Trigger: CACCAACTTCAGATTGTCAAGAAGTTGTCCAAGGGCATCCGCCCAGTTCTGGGGCAGCCGGAGGAAGTTCAGTTCCATCGGCTGCAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR CAA 90 bp TGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTCATCTACGGACTCAACCTaGGCTTTGGAGCCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: CSLCRAGDAISVPPSWASSTDST*ALEPAG
Trigger: ACCAGCAGGCTCCAAAGCCAAGGTTGAGTCCGTAGA...TGAGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp TTCATCTCTGCTATTGGGCAATGCTGCCTGCCCAGGTCCTTCTGGGGTTTCCCACGTAGGCACGCAGGGTaGCTATCCTCTCCACTCGGA +
Preference number: 5 (lower is better)
Translates to: FISAIGQCCLPRSFWGFPRRHAG*LSSPLG
Trigger: TCCGAGTGGAGAGGATAGCAACCCTGCGTGCCTACG...TGGGAAACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAATAGCAGAGATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp TGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTCACACTCCAGGACTGGGCGGATGCCCTaGGACAACTTCTTGACAATC +
Preference number: 5 (lower is better)
Translates to: CRAGDAISVPPSWASHSRTGRMP*DNFLTI
Trigger: GATTGTCAAGAAGTTGTCCAAGGGCATCCGCCCAGT...CCTGGAGTGTGAGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS GCA 90 bp GCGCGGGGGACCCACGAGGATCATCTTCATCAGCTTACACTTCTCTaGTTTGCGCAGCTGAGCACGCAGGAAAGACAGTGTTGCTTTCGG +
Preference number: 5 (lower is better)
Translates to: ARGTHEDHLHQLTLL*FAQLSTQERQCCFR
Trigger: CCGAAAGCAACACTGTCTTTCCTGCGTGCTCAGCTGCGCAAAGCAGAGAAGTGTAAGCTGATGAAGATGATCCTCGTGGGTCCCCCGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 90 bp TCTTTGATATCATTGCCAGGCGTCTGCTCTACCAGCTGGTCCAGCTaGCTGTCCGTCAGATACTGTACTTGGTCACCCAGACTGCGGCGC +
Preference number: 5 (lower is better)
Translates to: SLISLPGVCSTSWSS*LSVRYCTWSPRLRR
Trigger: GCGCCGCAGTCTGGGTGACCAAGTACAGTATCTGACGGACAGGCAGCTGGACCAGCTGGTAGAGCAGACGCCTGGCAATGATATCAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 90 bp GGGAGAGGTTCCTCTGCTTGTACGCAGTGTGGATTTCTTCCATGCTaGGGCACTGCACCGTGGAGCTGCCACCTGGTAAAGACAGTTTGC +
Preference number: 5 (lower is better)
Translates to: GRGSSACTQCGFLPC*GTAPWSCHLVKTVC
Trigger: GCAAACTGTCTTTACCAGGTGGCAGCTCCACGGTGCAGTGCCCCAGCATGGAAGAAATCCACACTGCGTACAAGCAGAGGAACCTCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 90 bp TGTGTGAAGCCTGTCCCCACCAGCAGCATCCTGAGGTCTTCCGCTTaGATCACCCCATTCTTTGCCACTGACCGCGAGCCCTTGATGTTA +
Preference number: 5 (lower is better)
Translates to: CVKPVPTSSILRSSA*ITPFFATDREPLML
Trigger: TAACATCAAGGGCTCGCGGTCAGTGGCAAAGAATGGGGTGATCCAAGCGGAAGACCTCAGGATGCTGCTGGTGGGGACAGGCTTCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 90 bp TCAAAGTACTGCACGCTCTCTGACCTCTCGTTTGGATCTGCATGCTaGGCCCAGGATGCTTCACAGACAGGGCAGGGTACGTACTGCTCC +
Preference number: 5 (lower is better)
Translates to: SKYCTLSDLSFGSAC*AQDASQTGQGTYCS
Trigger: GGAGCAGTACGTACCCTGCCCTGTCTGTGAAGCATCCTGGGCCCAGCATGCAGATCCAAACGAGAGGTCAGAGAGCGTGCAGTACTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CCA 90 bp GTTCTCCAGGAAGAGCCTGGCTGGGAAGTCAGTCATGAACAGCTCTaGTACAAGCTCCTGAAGTGGTACTGGGAGGTCTGGGTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: VLQEEPGWEVSHEQL*YKLLKWYWEVWVSG
Trigger: CCCAGACACCCAGACCTCCCAGTACCACTTCAGGAGCTTGTACCAGAGCTGTTCATGACTGACTTCCCAGCCAGGCTCTTCCTGGAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR CAA 90 bp TGGGGTCACTCTCCCCGGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTCCCCCAGCTGGTTGTTaGAGAGATTCAGCTTCTTTA +
Preference number: 5 (lower is better)
Translates to: WGHSPRLLEAYGRGKRRPPPAGC*RDSASL
Trigger: TAAAGAAGCTGAATCTCTCAAACAACCAGCTGGGGG...AGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCCGGGGAGAGTGACCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp TGCCCAGGTCCTTCTGGGGTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATGCAGCTCTGTCAGCCTGTaGTCAGCTAGATCGAGTTCT +
Preference number: 5 (lower is better)
Translates to: CPGPSGVSHVQPLPSRRCSSVSL*SARSSS
Trigger: AGAACTCGATCTAGCTGACAACAGGCTGACAGAGCT...GCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAACCCCAGAAGGACCTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp TCCCCGGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAACCCACATCCTTCATGTaGCACGTGACGTGGAAGATC +
Preference number: 5 (lower is better)
Translates to: SPAPGSLWKRQEEASLNQPTSFM*HVTWKI
Trigger: GATCTTCCACGTCACGTGCAACATGAAGGATGTGGG...TTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCCGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp CCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGACTGACCGCGAGCCCTaGATGTTAAAGATCCTCTGC +
Preference number: 5 (lower is better)
Translates to: PCAAFAEQEMRSQFHQAGTDREP*MLKILC
Trigger: GCAGAGGATCTTTAACATCAAGGGCTCGCGGTCAGT...CCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp CCAGGGACCCTTGCACTGGGCTTTCCGGCCATGACTCTTGAAGGAATCCATTCACCGTGCTATGAACCGTaGCCAGAAGCCAACAGGCAC +
Preference number: 5 (lower is better)
Translates to: PGTLALGFPAMTLEGIHSPCYEP*PEANRH
Trigger: GTGCCTGTTGGCTTCTGGCAACGGTTCATAGCACGG...TGAATGGATTCCTTCAAGAGTCATGGCCGGAAAGCCCAGTGCAAGGGTCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp TTTGTCGGGGGAGAAGAATGTAAAGGGAGACCAGGGACCCTTGCACTGGGCTTTGGCGCTTCTCCGGCTTaGTGTCCCAGCACTCCATCA +
Preference number: 5 (lower is better)
Translates to: FVGGEECKGRPGTLALGFGASPA*CPSTPS
Trigger: TGATGGAGTGCTGGGACACAAAGCCGGAGAAGCGCC...AAAGCCCAGTGCAAGGGTCCCTGGTCTCCCTTTACATTCTTCTCCCCCGACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS TCA 90 bp CTGGAGAGGTCCAGGGTCTTGAGTTGGGTGCAGGTCCACTTCTCTTaGGGTGGCAGCGACAACAGCTGGTTTCCCTGTAACCTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: LERSRVLSWVQVHFS*GGSDNSWFPCNLKN
Trigger: GTTCTTGAGGTTACAGGGAAACCAGCTGTTGTCGCTGCCACCTCAAGAGAAGTGGACCTGCACCCAACTCAAGACCCTGGACCTCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS TCA 90 bp AGGATGCTGCAAGGCATGCAGCATGCTGGCCTCCTGACGGAAATCTaGGAAGTTCTTCATGGCATCCATGGCTCTCAGGTGCCGCAGCAT +
Preference number: 5 (lower is better)
Translates to: RMLQGMQHAGLLTEI*EVLHGIHGSQVPQH
Trigger: ATGCTGCGGCACCTGAGAGCCATGGATGCCATGAAGAACTTCTCAGATTTCCGTCAGGAGGCCAGCATGCTGCATGCCTTGCAGCATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS TCA 90 bp GGGATGAGAAGAAGGCCGACTGCTTCCCACAGGGCAGCATGTACATaGAGGTGGCAAAGGTTGGGTCTTTCATCTGGCTCACCACGGACA +
Preference number: 5 (lower is better)
Translates to: GMRRRPTASHRAACT*RWQRLGLSSGSPRT
Trigger: TGTCCGTGGTGAGCCAGATGAAAGACCCAACCTTTGCCACCTTCATGTACATGCTGCCCTGTGGGAAGCAGTCGGCCTTCTTCTCATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS TCA 90 bp CTCCTTCCCATCCCAGAACACCACAGTGTACTCCTGGCTCTGGGATaGGAAGAAGGCCGACTGCTTCCCACAGGGCAGCATGTACATGAA +
Preference number: 5 (lower is better)
Translates to: LLPIPEHHSVLLALG*EEGRLLPTGQHVHE
Trigger: TTCATGTACATGCTGCCCTGTGGGAAGCAGTCGGCCTTCTTCTCATCCCAGAGCCAGGAGTACACTGTGGTGTTCTGGGATGGGAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS GCA 90 bp GTGCTACCCACATCCTTCATGTTGCACGTGACGTGGAAGATCAGTTaGCGCAGCCCCTCCTGCCCTTCCAGATTCTTGCAGGAGATCTCA +
Preference number: 5 (lower is better)
Translates to: VLPTSFMLHVTWKIS*RSPSCPSRFLQEIS
Trigger: TGAGATCTCCTGCAAGAATCTGGAAGGGCAGGAGGGGCTGCGGCAACTGATCTTCCACGTCACGTGCAACATGAAGGATGTGGGTAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 90 bp AACACCACAGTGTACTCCTGGCTCTGGGATGAGAAGAAGGCCGACTaGTTCCCACAGGGCAGCATGTACATGAAGGTGGCAAAGGTTGGG +
Preference number: 5 (lower is better)
Translates to: NTTVYSWLWDEKKAD*FPQGSMYMKVAKVG
Trigger: CCCAACCTTTGCCACCTTCATGTACATGCTGCCCTGTGGGAAGCAGTCGGCCTTCTTCTCATCCCAGAGCCAGGAGTACACTGTGGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CCA 90 bp TTGAACTCTACGGACTCAACCTTGGCTTTGGAGCCTGCTGGTCTCTaGAGCTCCCACTTGGTGGTCCTGATGGTGGCTTCACTGTGTGCT +
Preference number: 5 (lower is better)
Translates to: LNSTDSTLALEPAGL*SSHLVVLMVASLCA
Trigger: AGCACACAGTGAAGCCACCATCAGGACCACCAAGTGGGAGCTCCAGAGACCAGCAGGCTCCAAAGCCAAGGTTGAGTCCGTAGAGTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp CCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTCACACTCTTCCTGAGCAGATGTTaGCTTGGCTCAGGACTATCC +
Preference number: 5 (lower is better)
Translates to: PLPSRRCDLSSTKLGLTLFLSRC*LGSGLS
Trigger: GGATAGTCCTGAGCCAAGCAAACATCTGCTCAGGAA...GAGTGTGAGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp GCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCTGTGGCTTCCCAAGCTCCCCCAGCTGGTaGTTTGAGAGATTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: AYGRGKRRPLSTNPCGFPSSPSW*FERFSF
Trigger: GAAGCTGAATCTCTCAAACAACCAGCTGGGGGAGCT...TGGGAAGCCACAGGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp TTCATCTCTGCTATTGGGCAATGCTGCCTGCCCAGGTCCTTCTGGGGTTTCCCACCGATGTCCCAGACGTaGAACTCTACGGACTCAACC +
Preference number: 5 (lower is better)
Translates to: FISAIGQCCLPRSFWGFPPMSQT*NSTDST
Trigger: GGTTGAGTCCGTAGAGTTCAACGTCTGGGACATCGG...TGGGAAACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAATAGCAGAGATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp TGCCCAGGTCCTTCTGGGGTTTCCCATGTGCAGCCTTTGCCGAGCAGGAGATGCAAGGAACTGGAAGTATaGCTCCTCAGTCTGCTGTGT +
Preference number: 5 (lower is better)
Translates to: CPGPSGVSHVQPLPSRRCKELEV*LLSLLC
Trigger: ACACAGCAGACTGAGGAGCAATACTTCCAGTTCCTT...GCATCTCCTGCTCGGCAAAGGCTGCACATGGGAAACCCCAGAAGGACCTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 90 bp ACACTTCTCTGCTTTGCGCAGCTGAGCACGCAGGAAAGACAGTGTTaGTTTCGGGCCTTCTTTCCTGACCTCCGCAGGCACGTTGCTAAT +
Preference number: 5 (lower is better)
Translates to: TLLCFAQLSTQERQC*FRAFFPDLRRHVAN
Trigger: ATTAGCAACGTGCCTGCGGAGGTCAGGAAAGAAGGCCCGAAAGCAACACTGTCTTTCCTGCGTGCTCAGCTGCGCAAAGCAGAGAAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 90 bp GGGGACCCACGAGGATCATCTTCATCAGCTTACACTTCTCTGCTTTaGGCAGCTGAGCACGCAGGAAAGACAGTGTTGCTTTCGGGCCTT +
Preference number: 5 (lower is better)
Translates to: GDPRGSSSSAYTSLL*AAEHAGKTVLLSGL
Trigger: AAGGCCCGAAAGCAACACTGTCTTTCCTGCGTGCTCAGCTGCGCAAAGCAGAGAAGTGTAAGCTGATGAAGATGATCCTCGTGGGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 90 bp ATATCAAAGTACTGCACGCTCTCTGACCTCTCGTTTGGATCTGCATaGTGGGCCCAGGATGCTTCACAGACAGGGCAGGGTACGTACTGC +
Preference number: 5 (lower is better)
Translates to: ISKYCTLSDLSFGSA*WAQDASQTGQGTYC
Trigger: GCAGTACGTACCCTGCCCTGTCTGTGAAGCATCCTGGGCCCAGCATGCAGATCCAAACGAGAGGTCAGAGAGCGTGCAGTACTTTGATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS GCA 90 bp TCCCGTTCGATGGCTGTGAGCACACAGTCTTCCATATCAAAGTACTaGACGCTCTCTGACCTCTCGTTTGGATCTGCATGCTGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: SRSMAVSTQSSISKY*TLSDLSFGSACWAQ
Trigger: CTGGGCCCAGCATGCAGATCCAAACGAGAGGTCAGAGAGCGTGCAGTACTTTGATATGGAAGACTGTGTGCTCACAGCCATCGAACGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CCA 90 bp CTGTCATTGGCAACAGGGAGGGCAATCTCGAACTTGGCAAGGAACTaGAAGTATTGCTCCTCAGTCTGCTGTGTGAAGCCTGTCCCCACC +
Preference number: 5 (lower is better)
Translates to: LSLATGRAISNLARN*KYCSSVCCVKPVPT
Trigger: GGTGGGGACAGGCTTCACACAGCAGACTGAGGAGCAATACTTCCAGTTCCTTGCCAAGTTCGAGATTGCCCTCCCTGTTGCCAATGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 90 bp GTGGCCGTCAGGGCAGGGAACCACTGGTCAATCAGGGAGTTGACATaGTCTGTGATAAAAGCCATTGCCGAGAAGTCCCTCATCTCTGAC +
Preference number: 5 (lower is better)
Translates to: VAVRAGNHWSIRELT*SVIKAIAEKSLISD
Trigger: GTCAGAGATGAGGGACTTCTCGGCAATGGCTTTTATCACAGACCATGTCAACTCCCTGATTGACCAGTGGTTCCCTGCCCTGACGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR CAA 90 bp ATTGGGCAATGCTGCCTGCCCAGGTCCTTCTGGGGTTTCCCATGTGCAGCCTTTGAAGGAGTGCATAAATaGGACAGGGAGCTCTGTCAG +
Preference number: 5 (lower is better)
Translates to: IGQCCLPRSFWGFPCAAFEGVHK*DRELCQ
Trigger: CTGACAGAGCTCCCTGTCCAATTTATGCACTCCTTC...AAAGGCTGCACATGGGAAACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp TTCATCTCTGCTATTGGGCAATGCTGCCTGCCCAGGTCCTTCTGGGGTTTCCCAATGTTGATATGCTCCTaGGCGCTCAGCGACCACACT +
Preference number: 5 (lower is better)
Translates to: FISAIGQCCLPRSFWGFPMLICS*ALSDHT
Trigger: AGTGTGGTCGCTGAGCGCCAAGGAGCATATCAACAT...TGGGAAACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAATAGCAGAGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR CAA 90 bp CCAGGGACCCTTGCACTGGGCTTTCCGGCCATGACTCTTGAAGGAATCCATTCAATGTTGATATGCTCCTaGGCGCTCAGCGACCACACT +
Preference number: 5 (lower is better)
Translates to: PGTLALGFPAMTLEGIHSMLICS*ALSDHT
Trigger: AGTGTGGTCGCTGAGCGCCAAGGAGCATATCAACAT...TGAATGGATTCCTTCAAGAGTCATGGCCGGAAAGCCCAGTGCAAGGGTCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR CAA 90 bp AGGATCTTGGTGGGGTGGGGACGAAGAATAAGAGGACATGGAGCAGTAGTCGGTCTTGACAATCTGAAGTaGGTGGTGGCCCAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: RILVGWGRRIRGHGAVVGLDNLK*VVAQCR
Trigger: CCTGCACTGGGCCACCACCAACTTCAGATTGTCAAG...ACCGACTACTGCTCCATGTCCTCTTATTCTTCGTCCCCACCCCACCAAGATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS-3UTR CAA 90 bp GGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCTTACATCACTAAGCAATaGGCCTTGTCGTCGAGGCAC +
Preference number: 5 (lower is better)
Translates to: GSWKPMEEARGGLSQPIPYITKQ*ALSSRH
Trigger: GTGCCTCGACGACAAGGCCAATTGCTTAGTGATGTA...AGGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS TCA 90 bp CATCTTCATTTTTGCCGAGCTGGTTTCTGGAGAGGTCCAGGGTCTTaGGTTGGGTGCAGGTCCACTTCTCTTGAGGTGGCAGCGACAACA +
Preference number: 5 (lower is better)
Translates to: HLHFCRAGFWRGPGS*VGCRSTSLEVAATT
Trigger: TGTTGTCGCTGCCACCTCAAGAGAAGTGGACCTGCACCCAACTCAAGACCCTGGACCTCTCCAGAAACCAGCTCGGCAAAAATGAAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 90 bp TGGACAGGGAGCTCTGTCAGCCTGTTGTCAGCTAGATCGAGTTCTTaGAGCTTCCGCAGGCCGATCCAGTTAGTGGCGTTTTCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: WTGSSVSLLSARSSS*SFRRPIQLVAFSSS
Trigger: TGAAGAAGAAAACGCCACTAACTGGATCGGCCTGCGGAAGCTGCAAGAACTCGATCTAGCTGACAACAGGCTGACAGAGCTCCCTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 90 bp AGGTCCATCTCAGCCAAGCTGATTAGCATCCGTGCTATGAACCGTTaGCAGAAGCCAACAGGCACGAAGCTCATCTTAAACACCCGCTGG +
Preference number: 5 (lower is better)
Translates to: RSISAKLISIRAMNR*QKPTGTKLILNTRW
Trigger: CCAGCGGGTGTTTAAGATGAGCTTCGTGCCTGTTGGCTTCTGGCAACGGTTCATAGCACGGATGCTAATCAGCTTGGCTGAGATGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 90 bp CCACCTGGTAAAGACAGTTTGCTGCCCATGTCTTCGGCACCATTATaGGTCTCCATGGCAGGTCCTGGACACACAGCTAATCCTTCTGTC +
Preference number: 5 (lower is better)
Translates to: PPGKDSLLPMSSAPL*VSMAGPGHTANPSV
Trigger: GACAGAAGGATTAGCTGTGTGTCCAGGACCTGCCATGGAGACCCATAATGGTGCCGAAGACATGGGCAGCAAACTGTCTTTACCAGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp TGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGCCTCAACAGCATCAAGATGGTaGTCATTCAGACAAAGGACC +
Preference number: 5 (lower is better)
Translates to: CSLCRAGDAISVPPSWASTASRW*SFRQRT
Trigger: GGTCCTTTGTCTGAATGACAACCATCTTGATGCTGT...TGAGGCCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp CCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGGACTCTGTGTTTTCATTaGCAAAGCTGCACACTACGG +
Preference number: 5 (lower is better)
Translates to: PCAAFAEQEMRSQFHQAGTLCFH*QSCTLR
Trigger: CCGTAGTGTGCAGCTTTGCAAATGAAAACACAGAGT...CCCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS TCA 90 bp AAGGCTGTAGATATAGATTTTCTGGTCCTCCGTGGCTATCCACACTaGGCTCTGGACCTTGAGCTGACAGCTCAACTTCATCCCGGGGCA +
Preference number: 5 (lower is better)
Translates to: KAVDIDFLVLRGYPH*ALDLELTAQLHPGA
Trigger: TGCCCCGGGATGAAGTTGAGCTGTCAGCTCAAGGTCCAGAGCTCAGTGTGGATAGCCACGGAGGACCAGAAAATCTATATCTACAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 90 bp ATGTCAATTTCAAGTAACCTGGAGCAGATGATTTCGTCGGAGGACTaGACGCAGGGCAGCTCCCCCAGCTGGTTGTTTGAGAGATTCAGC +
Preference number: 5 (lower is better)
Translates to: MSISSNLEQMISSED*TQGSSPSWLFERFS
Trigger: GCTGAATCTCTCAAACAACCAGCTGGGGGAGCTGCCCTGCGTGCAGTCCTCCGACGAAATCATCTGCTCCAGGTTACTTGAAATTGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 90 bp CAGGGCGCTGGCTTCGATGAAATACTTCCTGAGCAGATGTTTGCTTaGCTCAGGACTATCCAGCAGGATGTAGGAGCAGAAATAGGCTCC +
Preference number: 5 (lower is better)
Translates to: QGAGFDEILPEQMFA*LRTIQQDVGAEIGS
Trigger: GGAGCCTATTTCTGCTCCTACATCCTGCTGGATAGTCCTGAGCCAAGCAAACATCTGCTCAGGAAGTATTTCATCGAAGCCAGCGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 90 bp CAGATGATTTCGTCGGAGGACTGCACGCAGGGCAGCTCCCCCAGCTaGTTGTTTGAGAGATTCAGCTTCTTTAGATTGATGAGTCCCCAA +
Preference number: 5 (lower is better)
Translates to: QMISSEDCTQGSSPS*LFERFSFFRLMSPQ
Trigger: TTGGGGACTCATCAATCTAAAGAAGCTGAATCTCTCAAACAACCAGCTGGGGGAGCTGCCCTGCGTGCAGTCCTCCGACGAAATCATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 90 bp AAAGCTGGGAATTCCAACATGGAGGCTGTCTCAGTTCCAGAACGCTaGCGCCCTCTGGTGGTGAACAGGGAGATCCTCTTTGTTTTAAGC +
Preference number: 5 (lower is better)
Translates to: KAGNSNMEAVSVPER*RPLVVNREILFVLS
Trigger: GCTTAAAACAAAGAGGATCTCCCTGTTCACCACCAGAGGGCGCCAGCGTTCTGGAACTGAGACAGCCTCCATGTTGGAATTCCCAGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp TTGTGCCCATACACCCTGTTAACAACTTGCCTTTTCTTCATCTGCTGTCCACGTGAGAGGTCCAGGGTCTaGAGTTGGGTGCAGGTCCAC +
Preference number: 5 (lower is better)
Translates to: LCPYTLLTTCLFFICCPRERSRV*SWVQVH
Trigger: GTGGACCTGCACCCAACTCAAGACCCTGGACCTCTC...ACGTGGACAGCAGATGAAGAAAAGGCAAGTTGTTAACAGGGTGTATGGGCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp CCCATGTGCAGCCTTTGCCGAGCAGGAGATGCGATCTCAGTTCCACCAAGCTGGTGGTCAATCAGGGAGTaGACATGGTCTGTGATAAAA +
Preference number: 5 (lower is better)
Translates to: PMCSLCRAGDAISVPPSWWSIRE*TWSVIK
Trigger: TTTTATCACAGACCATGTCAACTCCCTGATTGACCA...CCAGCTTGGTGGAACTGAGATCGCATCTCCTGCTCGGCAAAGGCTGCACATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR CAA 90 bp GGATGCAGAACTTGGACCTGTTGGCTGTGTGGGAGCACAGGTAGGAGCAGCTTTAGGATGTTGTCCGACTaGAGGTCACAGAAGATGATG +
Preference number: 5 (lower is better)
Translates to: GCRTWTCWLCGSTGRSSFRMLSD*RSQKMM
Trigger: CATCATCTTCTGTGACCTCAAGTCGGACAACATCCT...AAAGCTGCTCCTACCTGTGCTCCCACACAGCCAACAGGTCCAAGTTCTGCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145954.2
CDS-3UTR CAA 90 bp CCAGTAGCTCCTAGCTTCTCAGCCCTTCTTAGCAGAAGGTTTAGCAAAGAACCCCTTGACAATCTGAAGTaGGTGGTGGCCCAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: PVAPSFSALLSRRFSKEPLDNLK*VVAQCR
Trigger: CCTGCACTGGGCCACCACCAACTTCAGATTGTCAAG...GGGTTCTTTGCTAAACCTTCTGCTAAGAAGGGCTGAGAAGCTAGGAGCTACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS TCA 90 bp ACGAGGATCATCTTCATCAGCTTACACTTCTCTGCTTTGCGCAGCTaGGCACGCAGGAAAGACAGTGTTGCTTTCGGGCCTTCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: TRIIFISLHFSALRS*ARRKDSVAFGPSFL
Trigger: CAGGAAAGAAGGCCCGAAAGCAACACTGTCTTTCCTGCGTGCTCAGCTGCGCAAAGCAGAGAAGTGTAAGCTGATGAAGATGATCCTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp CCATTCATCTCTGCTATTGGGCAATGCTGCCTGCCCAGGTCCTTCTGGGGTTTCTCAGCTTTTGAAGTTTaGAGAGGTGCAGGAATCCAG +
Preference number: 5 (lower is better)
Translates to: PFISAIGQCCLPRSFWGFSAFEV*RGAGIQ
Trigger: CTGGATTCCTGCACCTCTCAAAACTTCAAAAGCTGA...GAAACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAATAGCAGAGATGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp ATTGGGCAATGCTGCCTGCCCAGGTCCTTCTGGGGTTTCCCATGTGCAGCCTTTGATTCCAGGGCATTTTaGGAGGCTTTACAACATTTC +
Preference number: 5 (lower is better)
Translates to: IGQCCLPRSFWGFPCAAFDSRAF*EALQHF
Trigger: GAAATGTTGTAAAGCCTCCAAAAATGCCCTGGAATC...AAAGGCTGCACATGGGAAACCCCAGAAGGACCTGGGCAGGCAGCATTGCCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp TTGTGCCCATACACCCTGTTAACAACTTGCCTTTTCTTCATCTGCTGTCCACGTGACTCAACCTTGGCTTaGGAGCCTGCTGGTCTCTGG +
Preference number: 5 (lower is better)
Translates to: LCPYTLLTTCLFFICCPRDSTLA*EPAGLW
Trigger: CCAGAGACCAGCAGGCTCCAAAGCCAAGGTTGAGTC...ACGTGGACAGCAGATGAAGAAAAGGCAAGTTGTTAACAGGGTGTATGGGCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp AATTCTAGAAAAGGTTCAGTAACCCGAGCCAAATACAGTCTCACATTCAAACGTCAGACTGCGGCGCTGTaGCTCAGCCAGCACGGCCTC +
Preference number: 5 (lower is better)
Translates to: NSRKGSVTRAKYSLTFKRQTAAL*LSQHGL
Trigger: GAGGCCGTGCTGGCTGAGCAACAGCGCCGCAGTCTG...ACGTTTGAATGTGAGACTGTATTTGGCTCGGGTTACTGAACCTTTTCTAGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp GGGCCTCACACTCCAGGGATTCAGAGCCTTGTGAAACAGGCTGAAAGACTGGGGAGGAAGGAGTTCTTTTaGATAACAGGTACTGCCAAG +
Preference number: 5 (lower is better)
Translates to: GPHTPGIQSLVKQAERLGRKEFF*ITGTAK
Trigger: CTTGGCAGTACCTGTTATCAAAAAGAACTCCTTCCT...CCCCAGTCTTTCAGCCTGTTTCACAAGGCTCTGAATCCCTGGAGTGTGAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp TTTGTCGGGGGAGAAGAATGTAAAGGGAGACCAGGGACCCTTGCACTGGGCTTTACCCAAATGAGGTCTTaGACAGCAAGCACCTTCACA +
Preference number: 5 (lower is better)
Translates to: FVGGEECKGRPGTLALGFTQMRS*TASTFT
Trigger: TGTGAAGGTGCTTGCTGTCAAAGACCTCATTTGGGT...AAAGCCCAGTGCAAGGGTCCCTGGTCTCCCTTTACATTCTTCTCCCCCGACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp CAACTTGCCTTTTCTTCATCTGCTGTCCACGTGGGCAGTAAATGTTTGGCAAATTCCGTGTGCTCCAGCTaGCTGTTCTCCAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: QLAFSSSAVHVGSKCLANSVCSS*LFSRKS
Trigger: GCTCTTCCTGGAGAACAGCAAGCTGGAGCACACGGA...ATTTGCCAAACATTTACTGCCCACGTGGACAGCAGATGAAGAAAAGGCAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp AAACAAGATTATGATGTGCAAACAAACAGGGCTTGTGCTCCAGCTGTGTCCAAGCAGAACTTGGACCTGTaGGCTGTGTGGGAGCACAGG +
Preference number: 5 (lower is better)
Translates to: KQDYDVQTNRACAPAVSKQNLDL*AVWEHR
Trigger: CCTGTGCTCCCACACAGCCAACAGGTCCAAGTTCTG...CTTGGACACAGCTGGAGCACAAGCCCTGTTTGTTTGCACATCATAATCTTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp TTGTGCCCATACACCCTGTTAACAACTTGCCTTTTCTTCATCTGCTGTCCACGTACTAAGCAATTGGCCTaGTCGTCGAGGCACCAGACC +
Preference number: 5 (lower is better)
Translates to: LCPYTLLTTCLFFICCPRTKQLA*SSRHQT
Trigger: GGTCTGGTGCCTCGACGACAAGGCCAATTGCTTAGT...ACGTGGACAGCAGATGAAGAAAAGGCAAGTTGTTAACAGGGTGTATGGGCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp TTGTGCCCATACACCCTGTTAACAACTTGCCTTTTCTTCATCTGCTGTCCACGTCTTCCACAGGCCCCTTaGAGGTGGTTTTGTGACTGC +
Preference number: 5 (lower is better)
Translates to: LCPYTLLTTCLFFICCPRLPQAP*RWFCDC
Trigger: GCAGTCACAAAACCACCTCAAAGGGGCCTGTGGAAG...ACGTGGACAGCAGATGAAGAAAAGGCAAGTTGTTAACAGGGTGTATGGGCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 90 bp CTGGAGACATTCAGAGAGGTGAGAGACTTGAAGGAGTGCATAAATTaGACAGGGAGCTCTGTCAGCCTGTTGTCAGCTAGATCGAGTTCT +
Preference number: 5 (lower is better)
Translates to: LETFREVRDLKECIN*TGSSVSLLSARSSS
Trigger: AGAACTCGATCTAGCTGACAACAGGCTGACAGAGCTCCCTGTCCAATTTATGCACTCCTTCAAGTCTCTCACCTCTCTGAATGTCTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 90 bp GAGAGGTTCTTCAGCAGGCAGACCGATGGGGGAACAGCATCAAGATaGTTGTCATTCAGACAAAGGACCTCCAAAGACTCACTTAGGAAA +
Preference number: 5 (lower is better)
Translates to: ERFFSRQTDGGTASR*LSFRQRTSKDSLRK
Trigger: TTTCCTAAGTGAGTCTTTGGAGGTCCTTTGTCTGAATGACAACCATCTTGATGCTGTTCCCCCATCGGTCTGCCTGCTGAAGAACCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp GGCTCCTGGAAGCCTATGGAAGAGGCAAGAGGAGGCCTCTCTCAACCAATCCCTGCATTAGCAGAATTCTaGAACTTCTTGATATGGAAC +
Preference number: 5 (lower is better)
Translates to: GSWKPMEEARGGLSQPIPALAEF*NFLIWN
Trigger: GTTCCATATCAAGAAGTTCAAGAATTCTGCTAATGC...AGGGATTGGTTGAGAGAGGCCTCCTCTTGCCTCTTCCATAGGCTTCCAGGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp CCAGCCCTCCTCCCACCTTACCCTGAACTGCTCCTCAACCAAGACTCTGTAGTGGCATTAGCAGAATTCTaGAACTTCTTGATATGGAAC +
Preference number: 5 (lower is better)
Translates to: PALLPPYPELLLNQDSVVALAEF*NFLIWN
Trigger: GTTCCATATCAAGAAGTTCAAGAATTCTGCTAATGC...CACTACAGAGTCTTGGTTGAGGAGCAGTTCAGGGTAAGGTGGGAGGAGGGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS-3UTR CAA 90 bp ATTTATAAAATGGTCCCCGTTGTGCCCATACACCCTGTTAACAACTTGCCTTTTAGCGAAGGCAGGCAGTaGGCAGACAGGTCAAGCTCT +
Preference number: 5 (lower is better)
Translates to: IYKMVPVVPIHPVNNLPFSEGRQ*ADRSSS
Trigger: AGAGCTTGACCTGTCTGCCAACTGCCTGCCTTCGCT...AAAAGGCAAGTTGTTAACAGGGTGTATGGGCACAACGGGGACCATTTTATAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp GCAAACAAACAGGGCTTGTGCTCCAGCTGTGTCCAAGTTTATTTTACCAAGTCAGGGAAGCTCTTCAGGTaGTTCCTGGAGACATTCAGA +
Preference number: 5 (lower is better)
Translates to: ANKQGLCSSCVQVYFTKSGKLFR*FLETFR
Trigger: TCTGAATGTCTCCAGGAACAACCTGAAGAGCTTCCC...TGACTTGGTAAAATAAACTTGGACACAGCTGGAGCACAAGCCCTGTTTGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp CCAGTAGCTCCTAGCTTCTCAGCCCTTCTTAGCAGAAGGTTTAGCAAAGAACCCTGGTCAATCAGGGAGTaGACATGGTCTGTGATAAAA +
Preference number: 5 (lower is better)
Translates to: PVAPSFSALLSRRFSKEPWSIRE*TWSVIK
Trigger: TTTTATCACAGACCATGTCAACTCCCTGATTGACCA...GGGTTCTTTGCTAAACCTTCTGCTAAGAAGGGCTGAGAAGCTAGGAGCTACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp CAACTTGCCTTTTCTTCATCTGCTGTCCACGTGGGCAGTAAATGTTTGGCAAATAGAGAGGTGAGAGACTaGAAGGAGTGCATAAATTGG +
Preference number: 5 (lower is better)
Translates to: QLAFSSSAVHVGSKCLANREVRD*KECINW
Trigger: CCAATTTATGCACTCCTTCAAGTCTCTCACCTCTCT...ATTTGCCAAACATTTACTGCCCACGTGGACAGCAGATGAAGAAAAGGCAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp AATTCTAGAAAAGGTTCAGTAACCCGAGCCAAATACAGTCTCACATTCAAACGTCAAAAGACAGCCATTTaGTCTGGCAGCGATTCCAGG +
Preference number: 5 (lower is better)
Translates to: NSRKGSVTRAKYSLTFKRQKTAI*SGSDSR
Trigger: CCTGGAATCGCTGCCAGACAAAATGGCTGTCTTTTG...ACGTTTGAATGTGAGACTGTATTTGGCTCGGGTTACTGAACCTTTTCTAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS-3UTR CAA 90 bp ATTTATAAAATGGTCCCCGTTGTGCCCATACACCCTGTTAACAACTTGCCTTTTAGGATGTTGTCCGACTaGAGGTCACAGAAGATGATG +
Preference number: 5 (lower is better)
Translates to: IYKMVPVVPIHPVNNLPFRMLSD*RSQKMM
Trigger: CATCATCTTCTGTGACCTCAAGTCGGACAACATCCT...AAAAGGCAAGTTGTTAACAGGGTGTATGGGCACAACGGGGACCATTTTATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 72 bp AGTGATGTCCGGGAAGCCCGTAGCCCTGGAGCCCGATaGCGAGCGGCAGAGGGCCAGCACGTAGGCACGCAG +
Preference number: 6 (lower is better)
Translates to: SDVREARSPGAR*RAAEGQHVGTQ
Trigger: CTGCGTGCCTACGTGCTGGCCCTCTGCCGCTCGCCATCGGGCTCCAGGGCTACGGGCTTCCCGGACATCACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CAA 72 bp TCGGCGTGTCCAAAATGCGCTGCCACCACAGCTGGGTaGTCATCGGTGGGCTCCGTCGGCAGCTCCACGCGC +
Preference number: 6 (lower is better)
Translates to: SACPKCAATTAG*SSVGSVGSSTR
Trigger: GCGCGTGGAGCTGCCGACGGAGCCCACCGATGACAACCCAGCTGTGGTGGCAGCGCATTTTGGACACGCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS TCA 72 bp GTCGGCAGCTCCACGCGCTTCTCAGTGAGCAGGAACTaGACAGTCTCCAGATCCCCGTGGGCTGCCGCGATG +
Preference number: 6 (lower is better)
Translates to: VGSSTRFSVSRN*TVSRSPWAAAM
Trigger: CATCGCGGCAGCCCACGGGGATCTGGAGACTGTTCAGTTCCTGCTCACTGAGAAGCGCGTGGAGCTGCCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 72 bp CCCAGCGGGGCCAGCTCCAAGGCGAAGCAGAGCGGGTaGATGCTGATGCCGATGAGTGACACGATGCAAGGA +
Preference number: 6 (lower is better)
Translates to: PSGASSKAKQSG*MLMPMSDTMQG
Trigger: TCCTTGCATCGTGTCACTCATCGGCATCAGCATCCACCCGCTCTGCTTCGCCTTGGAGCTGGCCCCGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CAA 90 bp CGTACTACTTCGGCGTGTCCAAAATGCGCTGCCACCACAGCTGGGTaGTCATCGGTGGGCTCCGTCGGCAGCTCCACGCGCTTCTCAGTG +
Preference number: 6 (lower is better)
Translates to: RTTSACPKCAATTAG*SSVGSVGSSTRFSV
Trigger: CACTGAGAAGCGCGTGGAGCTGCCGACGGAGCCCACCGATGACAACCCAGCTGTGGTGGCAGCGCATTTTGGACACGCCGAAGTAGTACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CAA 90 bp CTGCTCTACCAGCTGGTCCAGCTGCCTGTCCGTCAGATACTGTACTaGGTCACCCAGACTGCGGCGCTGTTGCTCAGCCAGCACGGCCTC +
Preference number: 6 (lower is better)
Translates to: LLYQLVQLPVRQILY*VTQTAALLLSQHGL
Trigger: GAGGCCGTGCTGGCTGAGCAACAGCGCCGCAGTCTGGGTGACCAAGTACAGTATCTGACGGACAGGCAGCTGGACCAGCTGGTAGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS TCA 72 bp AGCCTGCTGGTCTCTGGAGCTCCCACTTGGTGGTCCTaGTGGTGGCTTCACTGTGTGCTAGCTGCGGGGCCT +
Preference number: 6 (lower is better)
Translates to: SLLVSGAPTWWS*WWLHCVLAAGP
Trigger: AGGCCCCGCAGCTAGCACACAGTGAAGCCACCATCAGGACCACCAAGTGGGAGCTCCAGAGACCAGCAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS TCA 72 bp CAGCACTCCATCATGAGCGCCTGCAGCCGATGGAACTaGACTTCCTCCGGCTGCCCCAGAACTGGGCGGATG +
Preference number: 6 (lower is better)
Translates to: QHSIMSACSRWN*TSSGCPRTGRM
Trigger: CATCCGCCCAGTTCTGGGGCAGCCGGAGGAAGTTCAGTTCCATCGGCTGCAGGCGCTCATGATGGAGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS GCA 72 bp ACTGAACAGTCTCCAGATCCCCGTGGGCTGCCGCGATaGTCAGCAGCTGGCCCTTCTCCTGTGAGGATTCGC +
Preference number: 6 (lower is better)
Translates to: TEQSPDPRGLPR*SAAGPSPVRIR
Trigger: GCGAATCCTCACAGGAGAAGGGCCAGCTGCTGAGCATCGCGGCAGCCCACGGGGATCTGGAGACTGTTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 72 bp TACTTCGGCGTGTCCAAAATGCGCTGCCACCACAGCTaGGTTGTCATCGGTGGGCTCCGTCGGCAGCTCCAC +
Preference number: 6 (lower is better)
Translates to: YFGVSKMRCHHS*VVIGGLRRQLH
Trigger: GTGGAGCTGCCGACGGAGCCCACCGATGACAACCCAGCTGTGGTGGCAGCGCATTTTGGACACGCCGAAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 72 bp CCTGTCCCCACCAGCAGCATCCTGAGGTCTTCCGCTTaGATCACCCCATTCTTTGCCACTGACCGCGAGCCC +
Preference number: 6 (lower is better)
Translates to: PVPTSSILRSSA*ITPFFATDREP
Trigger: GGGCTCGCGGTCAGTGGCAAAGAATGGGGTGATCCAAGCGGAAGACCTCAGGATGCTGCTGGTGGGGACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CAA 72 bp GCCTTCCCGGTCTGTAAGATCTCCAGGAGTGTGGACTaGCCCTGGCGCGGGGGACCCACGAGGATCATCTTC +
Preference number: 6 (lower is better)
Translates to: AFPVCKISRSVD*PWRGGPTRIIF
Trigger: GAAGATGATCCTCGTGGGTCCCCCGCGCCAGGGCAAGTCCACACTCCTGGAGATCTTACAGACCGGGAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CAA 90 bp AGCTGCGGGGCCTTCCCGGTCTGTAAGATCTCCAGGAGTGTGGACTaGCCCTGGCGCGGGGGACCCACGAGGATCATCTTCATCAGCTTA +
Preference number: 6 (lower is better)
Translates to: SCGAFPVCKISRSVD*PWRGGPTRIIFISL
Trigger: TAAGCTGATGAAGATGATCCTCGTGGGTCCCCCGCGCCAGGGCAAGTCCACACTCCTGGAGATCTTACAGACCGGGAAGGCCCCGCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CAA 90 bp GACTCAACCTTGGCTTTGGAGCCTGCTGGTCTCTGGAGCTCCCACTaGGTGGTCCTGATGGTGGCTTCACTGTGTGCTAGCTGCGGGGCC +
Preference number: 6 (lower is better)
Translates to: DSTLALEPAGLWSSH*VVLMVASLCASCGA
Trigger: GGCCCCGCAGCTAGCACACAGTGAAGCCACCATCAGGACCACCAAGTGGGAGCTCCAGAGACCAGCAGGCTCCAAAGCCAAGGTTGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS TCA 72 bp TGGCCATGCTGGCCGGACCCCCGATGTCCCAGACGTTaGACTCTACGGACTCAACCTTGGCTTTGGAGCCTG +
Preference number: 6 (lower is better)
Translates to: WPCWPDPRCPRR*TLRTQPWLWSL
Trigger: CAGGCTCCAAAGCCAAGGTTGAGTCCGTAGAGTTCAACGTCTGGGACATCGGGGGTCCGGCCAGCATGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS TCA 72 bp GGCGCTTCTCCGGCTTTGTGTCCCAGCACTCCATCATaGGCGCCTGCAGCCGATGGAACTGAACTTCCTCCG +
Preference number: 6 (lower is better)
Translates to: GASPALCPSTPS*APAADGTELPP
Trigger: CGGAGGAAGTTCAGTTCCATCGGCTGCAGGCGCTCATGATGGAGTGCTGGGACACAAAGCCGGAGAAGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS GCA 72 bp CCTTCCCGGTCTGTAAGATCTCCAGGAGTGTGGACTTaGCCTGGCGCGGGGGACCCACGAGGATCATCTTCA +
Preference number: 6 (lower is better)
Translates to: PSRSVRSPGVWT*PGAGDPRGSSS
Trigger: TGAAGATGATCCTCGTGGGTCCCCCGCGCCAGGGCAAGTCCACACTCCTGGAGATCTTACAGACCGGGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 72 bp GCCTGTCCGTCAGATACTGTACTTGGTCACCCAGACTaGGGCGCTGTTGCTCAGCCAGCACGGCCTCCTGTA +
Preference number: 6 (lower is better)
Translates to: ACPSDTVLGHPD*GAVAQPARPPV
Trigger: TACAGGAGGCCGTGCTGGCTGAGCAACAGCGCCGCAGTCTGGGTGACCAAGTACAGTATCTGACGGACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 72 bp GCCCAGGATGCTTCACAGACAGGGCAGGGTACGTACTaGTCCATCAGTGGGGTCCCGTCACTTTCTGTGGCC +
Preference number: 6 (lower is better)
Translates to: AQDASQTGQGTY*SISGVPSLSVA
Trigger: GGCCACAGAAAGTGACGGGACCCCACTGATGGAGCAGTACGTACCCTGCCCTGTCTGTGAAGCATCCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CCA 72 bp CGGGCTCGGGAGAGGTTCCTCTGCTTGTACGCAGTGTaGATTTCTTCCATGCTGGGGCACTGCACCGTGGAG +
Preference number: 6 (lower is better)
Translates to: RARERFLCLYAV*ISSMLGHCTVE
Trigger: CTCCACGGTGCAGTGCCCCAGCATGGAAGAAATCCACACTGCGTACAAGCAGAGGAACCTCTCCCGAGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 72 bp CCGGTCTGTAAGATCTCCAGGAGTGTGGACTTGCCCTaGCGCGGGGGACCCACGAGGATCATCTTCATCAGC +
Preference number: 6 (lower is better)
Translates to: PVCKISRSVDLP*RGGPTRIIFIS
Trigger: GCTGATGAAGATGATCCTCGTGGGTCCCCCGCGCCAGGGCAAGTCCACACTCCTGGAGATCTTACAGACCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 72 bp TTTGGGGCCTTGGCCTCAATGTTGAGCAGCCAGAACTaGAGGTTGGCCACGGCTTCCTCTCCCAGTGCCAGG +
Preference number: 6 (lower is better)
Translates to: FGALASMLSSQN*RLATASSPSAR
Trigger: CCTGGCACTGGGAGAGGAAGCCGTGGCCAACCTCCAGTTCTGGCTGCTCAACATTGAGGCCAAGGCCCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 72 bp CAGCCAGCACGGCCTCCTGTAGGCTTATGTAGCTCCTaGGGATCAGCCTGCCGGCGAGTTTTTGACAGCCGA +
Preference number: 6 (lower is better)
Translates to: QPARPPVGLCSS*GSACRRVFDSR
Trigger: TCGGCTGTCAAAAACTCGCCGGCAGGCTGATCCCCAGGAGCTACATAAGCCTACAGGAGGCCGTGCTGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 72 bp CGCTGGATGGTGTTAGCCATTGGGTGCCGCATGCTGTaGGTGTCCAGCCCAGGCTTGGATGGAAGGAGGTGT +
Preference number: 6 (lower is better)
Translates to: RWMVLAIGCRML*VSSPGLDGRRC
Trigger: ACACCTCCTTCCATCCAAGCCTGGGCTGGACACCCACAGCATGCGGCACCCAATGGCTAACACCATCCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 72 bp TTCACAGACAGGGCAGGGTACGTACTGCTCCATCAGTaGGGTCCCGTCACTTTCTGTGGCCGTCAGGGCAGG +
Preference number: 6 (lower is better)
Translates to: FTDRAGYVLLHQ*GPVTFCGRQGR
Trigger: CCTGCCCTGACGGCCACAGAAAGTGACGGGACCCCACTGATGGAGCAGTACGTACCCTGCCCTGTCTGTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CCA 72 bp TACCTTCTCGTCATACACGATGCGAGGCCTGATCTCTaGGGCCTGGTAACCTGGGGTGCCCTCCACACCCAG +
Preference number: 6 (lower is better)
Translates to: YLLVIHDARPDL*GLVTWGALHTQ
Trigger: CTGGGTGTGGAGGGCACCCCAGGTTACCAGGCCCCAGAGATCAGGCCTCGCATCGTGTATGACGAGAAGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CAA 72 bp GTGGCCATGCTGGCCGGACCCCCGATGTCCCAGACGTaGAACTCTACGGACTCAACCTTGGCTTTGGAGCCT +
Preference number: 6 (lower is better)
Translates to: VAMLAGPPMSQT*NSTDSTLALEP
Trigger: AGGCTCCAAAGCCAAGGTTGAGTCCGTAGAGTTCAACGTCTGGGACATCGGGGGTCCGGCCAGCATGGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CAA 72 bp GCCTTGGCCTCAATGTTGAGCAGCCAGAACTGGAGGTaGGCCACGGCTTCCTCTCCCAGTGCCAGGTTCCAG +
Preference number: 6 (lower is better)
Translates to: ALASMLSSQNWR*ATASSPSARFQ
Trigger: CTGGAACCTGGCACTGGGAGAGGAAGCCGTGGCCAACCTCCAGTTCTGGCTGCTCAACATTGAGGCCAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS TCA 72 bp ACCACCACATACAGCGCCTTGTCTGTGAAGAAGCACTaGTTGACCGTGGCCATGCTGGCCGGACCCCCGATG +
Preference number: 6 (lower is better)
Translates to: TTTYSALSVKKH*LTVAMLAGPPM
Trigger: CATCGGGGGTCCGGCCAGCATGGCCACGGTCAATCAGTGCTTCTTCACAGACAAGGCGCTGTATGTGGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 72 bp GGCAGGCAGTTGGCAGACAGGTCAAGCTCTGTGATCTaGCAGGAGATGTCTAGGAGCCAGTCCAGGTCCACC +
Preference number: 6 (lower is better)
Translates to: GRQLADRSSSVI*QEMSRSQSRST
Trigger: GGTGGACCTGGACTGGCTCCTAGACATCTCCTGCCAGATCACAGAGCTTGACCTGTCTGCCAACTGCCTGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 72 bp GTCCAGGTGTGTCCCGACCACCAGCACAACGGCATTTaGGGCCTTGGCCTCAATGTTGAGCAGCCAGAACTG +
Preference number: 6 (lower is better)
Translates to: VQVCPDHQHNGI*GLGLNVEQPEL
Trigger: CAGTTCTGGCTGCTCAACATTGAGGCCAAGGCCCCAAATGCCGTTGTGCTGGTGGTCGGGACACACCTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 72 bp TGCACGCTCTCTGACCTCTCGTTTGGATCTGCATGCTaGGCCCAGGATGCTTCACAGACAGGGCAGGGTACG +
Preference number: 6 (lower is better)
Translates to: CTLSDLSFGSAC*AQDASQTGQGT
Trigger: CGTACCCTGCCCTGTCTGTGAAGCATCCTGGGCCCAGCATGCAGATCCAAACGAGAGGTCAGAGAGCGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CAA 90 bp ATGCTGGGGCACTGCACCGTGGAGCTGCCACCTGGTAAAGACAGTTaGCTGCCCATGTCTTCGGCACCATTATGGGTCTCCATGGCAGGT +
Preference number: 6 (lower is better)
Translates to: MLGHCTVELPPGKDS*LPMSSAPLWVSMAG
Trigger: ACCTGCCATGGAGACCCATAATGGTGCCGAAGACATGGGCAGCAAACTGTCTTTACCAGGTGGCAGCTCCACGGTGCAGTGCCCCAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CAA 90 bp CCCTCCTGCCCTTCCAGATTCTTGCAGGAGATCTCATGCAAGTGTTaGAAAGTGATGTCCGGGAAGCCCGTAGCCCTGGAGCCCGATGGC +
Preference number: 6 (lower is better)
Translates to: PSCPSRFLQEISCKC*KVMSGKPVALEPDG
Trigger: GCCATCGGGCTCCAGGGCTACGGGCTTCCCGGACATCACTTTCAAACACTTGCATGAGATCTCCTGCAAGAATCTGGAAGGGCAGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CAA 90 bp CCACCTTGGCCCAGAATGCTGTTCTCACCCTCCGTGTGCTCCAGCTaGCTGTTCTCCAGGAAGAGCCTGGCTGGGAAGTCAGTCATGAAC +
Preference number: 6 (lower is better)
Translates to: PPWPRMLFSPSVCSS*LFSRKSLAGKSVMN
Trigger: GTTCATGACTGACTTCCCAGCCAGGCTCTTCCTGGAGAACAGCAAGCTGGAGCACACGGAGGGTGAGAACAGCATTCTGGGCCAAGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CAA 90 bp AGGGGCATAAAGGAAGAATCTTTGGCATTCTCAGATAGCACGGTGTaGAGACTGCCCAGCGGGGCCAGCTCCAAGGCGAAGCAGAGCGGG +
Preference number: 6 (lower is better)
Translates to: RGIKEESLAFSDSTV*RLPSGASSKAKQSG
Trigger: CCCGCTCTGCTTCGCCTTGGAGCTGGCCCCGCTGGGCAGTCTCAACACCGTGCTATCTGAGAATGCCAAAGATTCTTCCTTTATGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS TCA 72 bp CTCTCGGAGGCCAGGGTTATTGCCCAAGTAGAGCTCTaGGAGGTTCTTCAGCAGGCAGACCGATGGGGGAAC +
Preference number: 6 (lower is better)
Translates to: LSEARVIAQVEL*EVLQQADRWGN
Trigger: GTTCCCCCATCGGTCTGCCTGCTGAAGAACCTCTCAGAGCTCTACTTGGGCAATAACCCTGGCCTCCGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS TCA 72 bp GGCGAAGCAGAGCGGGTGGATGCTGATGCCGATGAGTaGCACGATGCAAGGATGCTGCAAGGCATGCAGCAT +
Preference number: 6 (lower is better)
Translates to: GEAERVDADADE*HDARMLQGMQH
Trigger: ATGCTGCATGCCTTGCAGCATCCTTGCATCGTGTCACTCATCGGCATCAGCATCCACCCGCTCTGCTTCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS TCA 72 bp GCCCCAGAACTGGGCGGATGCCCTTGGACAACTTCTTaGCAATCTGAAGTTGGTGGTGGCCCAGTGCAGGAC +
Preference number: 6 (lower is better)
Translates to: APELGGCPWTTS*QSEVGGGPVQD
Trigger: GTCCTGCACTGGGCCACCACCAACTTCAGATTGTCAAGAAGTTGTCCAAGGGCATCCGCCCAGTTCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS GCA 72 bp GGTTCCTCTGCTTGTACGCAGTGTGGATTTCTTCCATaGTGGGGCACTGCACCGTGGAGCTGCCACCTGGTA +
Preference number: 6 (lower is better)
Translates to: GSSACTQCGFLP*WGTAPWSCHLV
Trigger: TACCAGGTGGCAGCTCCACGGTGCAGTGCCCCAGCATGGAAGAAATCCACACTGCGTACAAGCAGAGGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 72 bp CCTCTGAGTAGGTCTCGGGCTCGGGAGAGGTTCCTCTaGTTGTACGCAGTGTGGATTTCTTCCATGCTGGGG +
Preference number: 6 (lower is better)
Translates to: PLSRSRARERFL*LYAVWISSMLG
Trigger: CCCCAGCATGGAAGAAATCCACACTGCGTACAAGCAGAGGAACCTCTCCCGAGCCCGAGACCTACTCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 72 bp TGCTTTGCGCAGCTGAGCACGCAGGAAAGACAGTGTTaGTTTCGGGCCTTCTTTCCTGACCTCCGCAGGCAC +
Preference number: 6 (lower is better)
Translates to: CFAQLSTQERQC*FRAFFPDLRRH
Trigger: GTGCCTGCGGAGGTCAGGAAAGAAGGCCCGAAAGCAACACTGTCTTTCCTGCGTGCTCAGCTGCGCAAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 72 bp TTGGTGGTCCTGATGGTGGCTTCACTGTGTGCTAGCTaGGGGGCCTTCCCGGTCTGTAAGATCTCCAGGAGT +
Preference number: 6 (lower is better)
Translates to: LVVLMVASLCAS*GAFPVCKISRS
Trigger: ACTCCTGGAGATCTTACAGACCGGGAAGGCCCCGCAGCTAGCACACAGTGAAGCCACCATCAGGACCACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 72 bp TACTGCACGCTCTCTGACCTCTCGTTTGGATCTGCATaGTGGGCCCAGGATGCTTCACAGACAGGGCAGGGT +
Preference number: 6 (lower is better)
Translates to: YCTLSDLSFGSA*WAQDASQTGQG
Trigger: ACCCTGCCCTGTCTGTGAAGCATCCTGGGCCCAGCATGCAGATCCAAACGAGAGGTCAGAGAGCGTGCAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS GCA 72 bp CCAGAATGCTGTTCTCACCCTCCGTGTGCTCCAGCTTaGTGTTCTCCAGGAAGAGCCTGGCTGGGAAGTCAG +
Preference number: 6 (lower is better)
Translates to: PECCSHPPCAPA*CSPGRAWLGSQ
Trigger: CTGACTTCCCAGCCAGGCTCTTCCTGGAGAACAGCAAGCTGGAGCACACGGAGGGTGAGAACAGCATTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CCA 72 bp GCTCATCTTAAACACCCGCTGGATGGTGTTAGCCATTaGGTGCCGCATGCTGTGGGTGTCCAGCCCAGGCTT +
Preference number: 6 (lower is better)
Translates to: AHLKHPLDGVSH*VPHAVGVQPRL
Trigger: AAGCCTGGGCTGGACACCCACAGCATGCGGCACCCAATGGCTAACACCATCCAGCGGGTGTTTAAGATGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CAA 72 bp CTGAGTAGGTCTCGGGCTCGGGAGAGGTTCCTCTGCTaGTACGCAGTGTGGATTTCTTCCATGCTGGGGCAC +
Preference number: 6 (lower is better)
Translates to: LSRSRARERFLC*YAVWISSMLGH
Trigger: GTGCCCCAGCATGGAAGAAATCCACACTGCGTACAAGCAGAGGAACCTCTCCCGAGCCCGAGACCTACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CAA 72 bp CCCAGAATGCTGTTCTCACCCTCCGTGTGCTCCAGCTaGCTGTTCTCCAGGAAGAGCCTGGCTGGGAAGTCA +
Preference number: 6 (lower is better)
Translates to: PRMLFSPSVCSS*LFSRKSLAGKS
Trigger: TGACTTCCCAGCCAGGCTCTTCCTGGAGAACAGCAAGCTGGAGCACACGGAGGGTGAGAACAGCATTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS TCA 72 bp AGGAAGAATCTTTGGCATTCTCAGATAGCACGGTGTTaGGACTGCCCAGCGGGGCCAGCTCCAAGGCGAAGC +
Preference number: 6 (lower is better)
Translates to: RKNLWHSQIARC*DCPAGPAPRRS
Trigger: GCTTCGCCTTGGAGCTGGCCCCGCTGGGCAGTCTCAACACCGTGCTATCTGAGAATGCCAAAGATTCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS TCA 72 bp ACATATCTACCTTCTCGTCATACACGATGCGAGGCCTaGTCTCTGGGGCCTGGTAACCTGGGGTGCCCTCCA +
Preference number: 6 (lower is better)
Translates to: TYLPSRHTRCEA*SLGPGNLGCPP
Trigger: TGGAGGGCACCCCAGGTTACCAGGCCCCAGAGATCAGGCCTCGCATCGTGTATGACGAGAAGGTAGATATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS GCA 72 bp GCACCGTGGAGCTGCCACCTGGTAAAGACAGTTTGCTaGCCATGTCTTCGGCACCATTATGGGTCTCCATGG +
Preference number: 6 (lower is better)
Translates to: APWSCHLVKTVC*PCLRHHYGSPW
Trigger: CCATGGAGACCCATAATGGTGCCGAAGACATGGGCAGCAAACTGTCTTTACCAGGTGGCAGCTCCACGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 72 bp TCAAGTAACCTGGAGCAGATGATTTCGTCGGAGGACTaGACGCAGGGCAGCTCCCCCAGCTGGTTGTTTGAG +
Preference number: 6 (lower is better)
Translates to: SSNLEQMISSED*TQGSSPSWLFE
Trigger: CTCAAACAACCAGCTGGGGGAGCTGCCCTGCGTGCAGTCCTCCGACGAAATCATCTGCTCCAGGTTACTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 72 bp TCATTGCCAGGCGTCTGCTCTACCAGCTGGTCCAGCTaGCTGTCCGTCAGATACTGTACTTGGTCACCCAGA +
Preference number: 6 (lower is better)
Translates to: SLPGVCSTSWSS*LSVRYCTWSPR
Trigger: TCTGGGTGACCAAGTACAGTATCTGACGGACAGGCAGCTGGACCAGCTGGTAGAGCAGACGCCTGGCAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 72 bp ATCTTAAACACCCGCTGGATGGTGTTAGCCATTGGGTaGCGCATGCTGTGGGTGTCCAGCCCAGGCTTGGAT +
Preference number: 6 (lower is better)
Translates to: ILNTRWMVLAIG*RMLWVSSPGLD
Trigger: ATCCAAGCCTGGGCTGGACACCCACAGCATGCGGCACCCAATGGCTAACACCATCCAGCGGGTGTTTAAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 72 bp CAGTGTGGATTTCTTCCATGCTGGGGCACTGCACCGTaGAGCTGCCACCTGGTAAAGACAGTTTGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: QCGFLPCWGTAP*SCHLVKTVCCP
Trigger: TGGGCAGCAAACTGTCTTTACCAGGTGGCAGCTCCACGGTGCAGTGCCCCAGCATGGAAGAAATCCACACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 72 bp TCCTCTGCTTGTACGCAGTGTGGATTTCTTCCATGCTaGGGCACTGCACCGTGGAGCTGCCACCTGGTAAAG +
Preference number: 6 (lower is better)
Translates to: SSACTQCGFLPC*GTAPWSCHLVK
Trigger: CTTTACCAGGTGGCAGCTCCACGGTGCAGTGCCCCAGCATGGAAGAAATCCACACTGCGTACAAGCAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 72 bp GAACTCTACGGACTCAACCTTGGCTTTGGAGCCTGCTaGTCTCTGGAGCTCCCACTTGGTGGTCCTGATGGT +
Preference number: 6 (lower is better)
Translates to: ELYGLNLGFGAC*SLELPLGGPDG
Trigger: ACCATCAGGACCACCAAGTGGGAGCTCCAGAGACCAGCAGGCTCCAAAGCCAAGGTTGAGTCCGTAGAGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 72 bp ATAGTGCTACCCACATCCTTCATGTTGCACGTGACGTaGAAGATCAGTTGCCGCAGCCCCTCCTGCCCTTCC +
Preference number: 6 (lower is better)
Translates to: IVLPTSFMLHVT*KISCRSPSCPS
Trigger: GGAAGGGCAGGAGGGGCTGCGGCAACTGATCTTCCACGTCACGTGCAACATGAAGGATGTGGGTAGCACTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 72 bp CCTGACGGAAATCTGAGAAGTTCTTCATGGCATCCATaGCTCTCAGGTGCCGCAGCATGGTGTCTGCTGGGG +
Preference number: 6 (lower is better)
Translates to: PDGNLRSSSWHP*LSGAAAWCLLG
Trigger: CCCCAGCAGACACCATGCTGCGGCACCTGAGAGCCATGGATGCCATGAAGAACTTCTCAGATTTCCGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CCA 72 bp ATGTACATGAAGGTGGCAAAGGTTGGGTCTTTCATCTaGCTCACCACGGACAAGGCCAGGGGGCGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: MYMKVAKVGSFI*LTTDKARGRFS
Trigger: GGAGAAGCGCCCCCTGGCCTTGTCCGTGGTGAGCCAGATGAAAGACCCAACCTTTGCCACCTTCATGTACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CCA 72 bp CCCACAGGGCAGCATGTACATGAAGGTGGCAAAGGTTaGGTCTTTCATCTGGCTCACCACGGACAAGGCCAG +
Preference number: 6 (lower is better)
Translates to: PTGQHVHEGGKG*VFHLAHHGQGQ
Trigger: CTGGCCTTGTCCGTGGTGAGCCAGATGAAAGACCCAACCTTTGCCACCTTCATGTACATGCTGCCCTGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CCA 72 bp TCCTCCTTCCCATCCCAGAACACCACAGTGTACTCCTaGCTCTGGGATGAGAAGAAGGCCGACTGCTTCCCA +
Preference number: 6 (lower is better)
Translates to: SSFPSQNTTVYS*LWDEKKADCFP
Trigger: TGGGAAGCAGTCGGCCTTCTTCTCATCCCAGAGCCAGGAGTACACTGTGGTGTTCTGGGATGGGAAGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CAA 72 bp CACTGCACCGTGGAGCTGCCACCTGGTAAAGACAGTTaGCTGCCCATGTCTTCGGCACCATTATGGGTCTCC +
Preference number: 6 (lower is better)
Translates to: HCTVELPPGKDS*LPMSSAPLWVS
Trigger: GGAGACCCATAATGGTGCCGAAGACATGGGCAGCAAACTGTCTTTACCAGGTGGCAGCTCCACGGTGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CAA 90 bp AGTGCTACCCACATCCTTCATGTTGCACGTGACGTGGAAGATCAGTaGCCGCAGCCCCTCCTGCCCTTCCAGATTCTTGCAGGAGATCTC +
Preference number: 6 (lower is better)
Translates to: SATHILHVARDVEDQ*PQPLLPFQILAGDL
Trigger: GAGATCTCCTGCAAGAATCTGGAAGGGCAGGAGGGGCTGCGGCAACTGATCTTCCACGTCACGTGCAACATGAAGGATGTGGGTAGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CAA 90 bp GGCAACAGGGAGGGCAATCTCGAACTTGGCAAGGAACTGGAAGTATaGCTCCTCAGTCTGCTGTGTGAAGCCTGTCCCCACCAGCAGCAT +
Preference number: 6 (lower is better)
Translates to: GNREGNLELGKELEV*LLSLLCEACPHQQH
Trigger: ATGCTGCTGGTGGGGACAGGCTTCACACAGCAGACTGAGGAGCAATACTTCCAGTTCCTTGCCAAGTTCGAGATTGCCCTCCCTGTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS TCA 72 bp GCGACAACAGCTGGTTTCCCTGTAACCTCAAGAACATaGGGGCGTCAAGCTGGAACAATCCCAGGGGCACCT +
Preference number: 6 (lower is better)
Translates to: ATTAGFPVTSRT*GRQAGTIPGAP
Trigger: AGGTGCCCCTGGGATTGTTCCAGCTTGACGCCCTCATGTTCTTGAGGTTACAGGGAAACCAGCTGTTGTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS TCA 72 bp TTTTGCCGAGCTGGTTTCTGGAGAGGTCCAGGGTCTTaGGTTGGGTGCAGGTCCACTTCTCTTGAGGTGGCA +
Preference number: 6 (lower is better)
Translates to: FCRAGFWRGPGS*VGCRSTSLEVA
Trigger: TGCCACCTCAAGAGAAGTGGACCTGCACCCAACTCAAGACCCTGGACCTCTCCAGAAACCAGCTCGGCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 72 bp ACTGCACCGTGGAGCTGCCACCTGGTAAAGACAGTTTaGTGCCCATGTCTTCGGCACCATTATGGGTCTCCA +
Preference number: 6 (lower is better)
Translates to: TAPWSCHLVKTV*CPCLRHHYGSP
Trigger: TGGAGACCCATAATGGTGCCGAAGACATGGGCAGCAAACTGTCTTTACCAGGTGGCAGCTCCACGGTGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 72 bp TCTAGTAGTTCACGTACTACTTCGGCGTGTCCAAAATaGGCTGCCACCACAGCTGGGTTGTCATCGGTGGGC +
Preference number: 6 (lower is better)
Translates to: SSSSRTTSACPK*AATTAGLSSVG
Trigger: GCCCACCGATGACAACCCAGCTGTGGTGGCAGCGCATTTTGGACACGCCGAAGTAGTACGTGAACTACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 72 bp GTTGAACTCTACGGACTCAACCTTGGCTTTGGAGCCTaGTGGTCTCTGGAGCTCCCACTTGGTGGTCCTGAT +
Preference number: 6 (lower is better)
Translates to: VELYGLNLGFGA*WSLELPLGGPD
Trigger: ATCAGGACCACCAAGTGGGAGCTCCAGAGACCAGCAGGCTCCAAAGCCAAGGTTGAGTCCGTAGAGTTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 72 bp ACATCCTTCATGTTGCACGTGACGTGGAAGATCAGTTaGCGCAGCCCCTCCTGCCCTTCCAGATTCTTGCAG +
Preference number: 6 (lower is better)
Translates to: TSFMLHVTWKIS*RSPSCPSRFLQ
Trigger: CTGCAAGAATCTGGAAGGGCAGGAGGGGCTGCGGCAACTGATCTTCCACGTCACGTGCAACATGAAGGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 72 bp AAGCCAACAGGCACGAAGCTCATCTTAAACACCCGCTaGATGGTGTTAGCCATTGGGTGCCGCATGCTGTGG +
Preference number: 6 (lower is better)
Translates to: KPTGTKLILNTR*MVLAIGCRMLW
Trigger: CCACAGCATGCGGCACCCAATGGCTAACACCATCCAGCGGGTGTTTAAGATGAGCTTCGTGCCTGTTGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 72 bp GTCAGTCATGAACAGCTCTGGTACAAGCTCCTGAAGTaGTACTGGGAGGTCTGGGTGTCTGGGGCAGGAGAT +
Preference number: 6 (lower is better)
Translates to: VSHEQLWYKLLK*YWEVWVSGAGD
Trigger: ATCTCCTGCCCCAGACACCCAGACCTCCCAGTACCACTTCAGGAGCTTGTACCAGAGCTGTTCATGACTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CCA 72 bp TGCTGGCCTCCTGACGGAAATCTGAGAAGTTCTTCATaGCATCCATGGCTCTCAGGTGCCGCAGCATGGTGT +
Preference number: 6 (lower is better)
Translates to: CWPPDGNLRSSS*HPWLSGAAAWC
Trigger: ACACCATGCTGCGGCACCTGAGAGCCATGGATGCCATGAAGAACTTCTCAGATTTCCGTCAGGAGGCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CAA 72 bp CACATCCTTCATGTTGCACGTGACGTGGAAGATCAGTaGCCGCAGCCCCTCCTGCCCTTCCAGATTCTTGCA +
Preference number: 6 (lower is better)
Translates to: HILHVARDVEDQ*PQPLLPFQILA
Trigger: TGCAAGAATCTGGAAGGGCAGGAGGGGCTGCGGCAACTGATCTTCCACGTCACGTGCAACATGAAGGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CAA 72 bp AAGGAAGAATCTTTGGCATTCTCAGATAGCACGGTGTaGAGACTGCCCAGCGGGGCCAGCTCCAAGGCGAAG +
Preference number: 6 (lower is better)
Translates to: KEESLAFSDSTV*RLPSGASSKAK
Trigger: CTTCGCCTTGGAGCTGGCCCCGCTGGGCAGTCTCAACACCGTGCTATCTGAGAATGCCAAAGATTCTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CAA 72 bp GTAGGCCAGGCCCGAGGCAATCTGGTAGGCTATCTTTaGGGTGAGCATGTGTCCCAGGGGCATAAAGGAAGA +
Preference number: 6 (lower is better)
Translates to: VGQARGNLVGYL*GEHVSQGHKGR
Trigger: TCTTCCTTTATGCCCCTGGGACACATGCTCACCCAAAAGATAGCCTACCAGATTGCCTCGGGCCTGGCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CAA 90 bp CACAGTCTTCCATATCAAAGTACTGCACGCTCTCTGACCTCTCGTTaGGATCTGCATGCTGGGCCCAGGATGCTTCACAGACAGGGCAGG +
Preference number: 6 (lower is better)
Translates to: HSLPYQSTARSLTSR*DLHAGPRMLHRQGR
Trigger: CCTGCCCTGTCTGTGAAGCATCCTGGGCCCAGCATGCAGATCCAAACGAGAGGTCAGAGAGCGTGCAGTACTTTGATATGGAAGACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CAA 90 bp CGCAGCATGGTGTCTGCTGGGGCATTAGCAGAATTCTTGAACTTCTaGATATGGAACCTCTTCACAGCCACAGGCTGGCCCTGGTACCGG +
Preference number: 6 (lower is better)
Translates to: RSMVSAGALAEFLNF*IWNLFTATGWPWYR
Trigger: CCGGTACCAGGGCCAGCCTGTGGCTGTGAAGAGGTTCCATATCAAGAAGTTCAAGAATTCTGCTAATGCCCCAGCAGACACCATGCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CAA 90 bp CTTGTGCAGGTAGGCCAGGCCCGAGGCAATCTGGTAGGCTATCTTTaGGGTGAGCATGTGTCCCAGGGGCATAAAGGAAGAATCTTTGGC +
Preference number: 6 (lower is better)
Translates to: LVQVGQARGNLVGYL*GEHVSQGHKGRIFG
Trigger: GCCAAAGATTCTTCCTTTATGCCCCTGGGACACATGCTCACCCAAAAGATAGCCTACCAGATTGCCTCGGGCCTGGCCTACCTGCACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS TCA 72 bp TGCTGGAGATGTCAATTTCAAGTAACCTGGAGCAGATaGTTTCGTCGGAGGACTGCACGCAGGGCAGCTCCC +
Preference number: 6 (lower is better)
Translates to: CWRCQFQVTWSR*FRRRTARRAAP
Trigger: GGGAGCTGCCCTGCGTGCAGTCCTCCGACGAAATCATCTGCTCCAGGTTACTTGAAATTGACATCTCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS TCA 72 bp CAAGGCATGCAGCATGCTGGCCTCCTGACGGAAATCTaGGAAGTTCTTCATGGCATCCATGGCTCTCAGGTG +
Preference number: 6 (lower is better)
Translates to: QGMQHAGLLTEI*EVLHGIHGSQV
Trigger: CACCTGAGAGCCATGGATGCCATGAAGAACTTCTCAGATTTCCGTCAGGAGGCCAGCATGCTGCATGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS TCA 72 bp CCCCTCGTGAAAGGACTGCCTGGAGATGCCGTAGTCTaGCAGTTTGATGTTGATATGCTCCTTGGCGCTCAG +
Preference number: 6 (lower is better)
Translates to: PLVKGLPGDAVV*QFDVDMLLGAQ
Trigger: CTGAGCGCCAAGGAGCATATCAACATCAAACTGTCAGACTACGGCATCTCCAGGCAGTCCTTTCACGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS TCA 72 bp AGAAGGCCGACTGCTTCCCACAGGGCAGCATGTACATaGAGGTGGCAAAGGTTGGGTCTTTCATCTGGCTCA +
Preference number: 6 (lower is better)
Translates to: RRPTASHRAACT*RWQRLGLSSGS
Trigger: TGAGCCAGATGAAAGACCCAACCTTTGCCACCTTCATGTACATGCTGCCCTGTGGGAAGCAGTCGGCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS GCA 72 bp TTGTACGCAGTGTGGATTTCTTCCATGCTGGGGCACTaGACCGTGGAGCTGCCACCTGGTAAAGACAGTTTG +
Preference number: 6 (lower is better)
Translates to: LYAVWISSMLGH*TVELPPGKDSL
Trigger: CAAACTGTCTTTACCAGGTGGCAGCTCCACGGTGCAGTGCCCCAGCATGGAAGAAATCCACACTGCGTACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 72 bp TCGTCGGAGGACTGCACGCAGGGCAGCTCCCCCAGCTaGTTGTTTGAGAGATTCAGCTTCTTTAGATTGATG +
Preference number: 6 (lower is better)
Translates to: SSEDCTQGSSPS*LFERFSFFRLM
Trigger: CATCAATCTAAAGAAGCTGAATCTCTCAAACAACCAGCTGGGGGAGCTGCCCTGCGTGCAGTCCTCCGACGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 72 bp AATTCCAACATGGAGGCTGTCTCAGTTCCAGAACGCTaGCGCCCTCTGGTGGTGAACAGGGAGATCCTCTTT +
Preference number: 6 (lower is better)
Translates to: NSNMEAVSVPER*RPLVVNREILF
Trigger: AAAGAGGATCTCCCTGTTCACCACCAGAGGGCGCCAGCGTTCTGGAACTGAGACAGCCTCCATGTTGGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CAA 72 bp GAGGGCAATCTCGAACTTGGCAAGGAACTGGAAGTATaGCTCCTCAGTCTGCTGTGTGAAGCCTGTCCCCAC +
Preference number: 6 (lower is better)
Translates to: EGNLELGKELEV*LLSLLCEACPH
Trigger: GTGGGGACAGGCTTCACACAGCAGACTGAGGAGCAATACTTCCAGTTCCTTGCCAAGTTCGAGATTGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CAA 90 bp ATGATTTCGTCGGAGGACTGCACGCAGGGCAGCTCCCCCAGCTGGTaGTTTGAGAGATTCAGCTTCTTTAGATTGATGAGTCCCCAAGGG +
Preference number: 6 (lower is better)
Translates to: MISSEDCTQGSSPSW*FERFSFFRLMSPQG
Trigger: CCCTTGGGGACTCATCAATCTAAAGAAGCTGAATCTCTCAAACAACCAGCTGGGGGAGCTGCCCTGCGTGCAGTCCTCCGACGAAATCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CAA 90 bp GACAGTGTTGCTTTCGGGCCTTCTTTCCTGACCTCCGCAGGCACGTaGCTAATGTTCAGATCTTCAATGTCCAGTTGCCAGAGGTTCCCC +
Preference number: 6 (lower is better)
Translates to: DSVAFGPSFLTSAGT*LMFRSSMSSCQRFP
Trigger: GGGGAACCTCTGGCAACTGGACATTGAAGATCTGAACATTAGCAACGTGCCTGCGGAGGTCAGGAAAGAAGGCCCGAAAGCAACACTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CAA 90 bp TCTTCCGCTTGGATCACCCCATTCTTTGCCACTGACCGCGAGCCCTaGATGTTAAAGATCCTCTGCAGGCATTCAGAGAGCCAGATGGGA +
Preference number: 6 (lower is better)
Translates to: SSAWITPFFATDREP*MLKILCRHSESQMG
Trigger: TCCCATCTGGCTCTCTGAATGCCTGCAGAGGATCTTTAACATCAAGGGCTCGCGGTCAGTGGCAAAGAATGGGGTGATCCAAGCGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS TCA 72 bp TGTTCTCCAGGAAGAGCCTGGCTGGGAAGTCAGTCATaGACAGCTCTGGTACAAGCTCCTGAAGTGGTACTG +
Preference number: 6 (lower is better)
Translates to: CSPGRAWLGSQS*TALVQAPEVVL
Trigger: CAGTACCACTTCAGGAGCTTGTACCAGAGCTGTTCATGACTGACTTCCCAGCCAGGCTCTTCCTGGAGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS GCA 72 bp GGCATCCATGGCTCTCAGGTGCCGCAGCATGGTGTCTaGTGGGGCATTAGCAGAATTCTTGAACTTCTTGAT +
Preference number: 6 (lower is better)
Translates to: GIHGSQVPQHGV*WGISRILELLD
Trigger: ATCAAGAAGTTCAAGAATTCTGCTAATGCCCCAGCAGACACCATGCTGCGGCACCTGAGAGCCATGGATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS GCA 72 bp GTGACACGATGCAAGGATGCTGCAAGGCATGCAGCATaGTGGCCTCCTGACGGAAATCTGAGAAGTTCTTCA +
Preference number: 6 (lower is better)
Translates to: VTRCKDAARHAA*WPPDGNLRSSS
Trigger: TGAAGAACTTCTCAGATTTCCGTCAGGAGGCCAGCATGCTGCATGCCTTGCAGCATCCTTGCATCGTGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CCA 72 bp AGGGCAGGGAACCACTGGTCAATCAGGGAGTTGACATaGTCTGTGATAAAAGCCATTGCCGAGAAGTCCCTC +
Preference number: 6 (lower is better)
Translates to: RAGNHWSIRELT*SVIKAIAEKSL
Trigger: GAGGGACTTCTCGGCAATGGCTTTTATCACAGACCATGTCAACTCCCTGATTGACCAGTGGTTCCCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CCA 72 bp ACACGATGCAAGGATGCTGCAAGGCATGCAGCATGCTaGCCTCCTGACGGAAATCTGAGAAGTTCTTCATGG +
Preference number: 6 (lower is better)
Translates to: TRCKDAARHAAC*PPDGNLRSSSW
Trigger: CCATGAAGAACTTCTCAGATTTCCGTCAGGAGGCCAGCATGCTGCATGCCTTGCAGCATCCTTGCATCGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CAA 72 bp TCGGAGGACTGCACGCAGGGCAGCTCCCCCAGCTGGTaGTTTGAGAGATTCAGCTTCTTTAGATTGATGAGT +
Preference number: 6 (lower is better)
Translates to: SEDCTQGSSPSW*FERFSFFRLMS
Trigger: ACTCATCAATCTAAAGAAGCTGAATCTCTCAAACAACCAGCTGGGGGAGCTGCCCTGCGTGCAGTCCTCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CAA 72 bp GAGTGCATAAATTGGACAGGGAGCTCTGTCAGCCTGTaGTCAGCTAGATCGAGTTCTTGCAGCTTCCGCAGG +
Preference number: 6 (lower is better)
Translates to: ECINWTGSSVSL*SARSSSCSFRR
Trigger: CCTGCGGAAGCTGCAAGAACTCGATCTAGCTGACAACAGGCTGACAGAGCTCCCTGTCCAATTTATGCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CAA 72 bp TGGATCACCCCATTCTTTGCCACTGACCGCGAGCCCTaGATGTTAAAGATCCTCTGCAGGCATTCAGAGAGC +
Preference number: 6 (lower is better)
Translates to: WITPFFATDREP*MLKILCRHSES
Trigger: GCTCTCTGAATGCCTGCAGAGGATCTTTAACATCAAGGGCTCGCGGTCAGTGGCAAAGAATGGGGTGATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS TCA 72 bp ATCTTCATCAGCTTACACTTCTCTGCTTTGCGCAGCTaGGCACGCAGGAAAGACAGTGTTGCTTTCGGGCCT +
Preference number: 6 (lower is better)
Translates to: IFISLHFSALRS*ARRKDSVAFGP
Trigger: AGGCCCGAAAGCAACACTGTCTTTCCTGCGTGCTCAGCTGCGCAAAGCAGAGAAGTGTAAGCTGATGAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS GCA 72 bp ACCCACGAGGATCATCTTCATCAGCTTACACTTCTCTaGTTTGCGCAGCTGAGCACGCAGGAAAGACAGTGT +
Preference number: 6 (lower is better)
Translates to: THEDHLHQLTLL*FAQLSTQERQC
Trigger: ACACTGTCTTTCCTGCGTGCTCAGCTGCGCAAAGCAGAGAAGTGTAAGCTGATGAAGATGATCCTCGTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 72 bp AAAGACAGTTTGCTGCCCATGTCTTCGGCACCATTATaGGTCTCCATGGCAGGTCCTGGACACACAGCTAAT +
Preference number: 6 (lower is better)
Translates to: KDSLLPMSSAPL*VSMAGPGHTAN
Trigger: ATTAGCTGTGTGTCCAGGACCTGCCATGGAGACCCATAATGGTGCCGAAGACATGGGCAGCAAACTGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 72 bp TTTCCCTGTAACCTCAAGAACATGAGGGCGTCAAGCTaGAACAATCCCAGGGGCACCTCTTTCAGAGAGTTC +
Preference number: 6 (lower is better)
Translates to: FPCNLKNMRASS*NNPRGTSFREF
Trigger: GAACTCTCTGAAAGAGGTGCCCCTGGGATTGTTCCAGCTTGACGCCCTCATGTTCTTGAGGTTACAGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 72 bp AGCTGTCATTGGCAACAGGGAGGGCAATCTCGAACTTaGCAAGGAACTGGAAGTATTGCTCCTCAGTCTGCT +
Preference number: 6 (lower is better)
Translates to: SCHWQQGGQSRT*QGTGSIAPQSA
Trigger: AGCAGACTGAGGAGCAATACTTCCAGTTCCTTGCCAAGTTCGAGATTGCCCTCCCTGTTGCCAATGACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CAA 72 bp ATCAGTTGCCGCAGCCCCTCCTGCCCTTCCAGATTCTaGCAGGAGATCTCATGCAAGTGTTTGAAAGTGATG +
Preference number: 6 (lower is better)
Translates to: ISCRSPSCPSRF*QEISCKCLKVM
Trigger: CATCACTTTCAAACACTTGCATGAGATCTCCTGCAAGAATCTGGAAGGGCAGGAGGGGCTGCGGCAACTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CAA 72 bp GTGTCTGCTGGGGCATTAGCAGAATTCTTGAACTTCTaGATATGGAACCTCTTCACAGCCACAGGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: VSAGALAEFLNF*IWNLFTATGWP
Trigger: GGGCCAGCCTGTGGCTGTGAAGAGGTTCCATATCAAGAAGTTCAAGAATTCTGCTAATGCCCCAGCAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS GCA 72 bp ATGGCTGTGAGCACACAGTCTTCCATATCAAAGTACTaGACGCTCTCTGACCTCTCGTTTGGATCTGCATGC +
Preference number: 6 (lower is better)
Translates to: MAVSTQSSISKY*TLSDLSFGSAC
Trigger: GCATGCAGATCCAAACGAGAGGTCAGAGAGCGTGCAGTACTTTGATATGGAAGACTGTGTGCTCACAGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CCA 72 bp TTCAGCAGGCAGACCGATGGGGGAACAGCATCAAGATaGTTGTCATTCAGACAAAGGACCTCCAAAGACTCA +
Preference number: 6 (lower is better)
Translates to: FSRQTDGGTASR*LSFRQRTSKDS
Trigger: TGAGTCTTTGGAGGTCCTTTGTCTGAATGACAACCATCTTGATGCTGTTCCCCCATCGGTCTGCCTGCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CAA 72 bp TTGGCGCTCAGCGACCACACTAGGATGTTGTCCGACTaGAGGTCACAGAAGATGATGTTTTTCTTGTGCAGG +
Preference number: 6 (lower is better)
Translates to: LALSDHTRMLSD*RSQKMMFFLCR
Trigger: CCTGCACAAGAAAAACATCATCTTCTGTGACCTCAAGTCGGACAACATCCTAGTGTGGTCGCTGAGCGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CAA 90 bp AGGTTCTTCAGCAGGCAGACCGATGGGGGAACAGCATCAAGATGGTaGTCATTCAGACAAAGGACCTCCAAAGACTCACTTAGGAAAGCT +
Preference number: 6 (lower is better)
Translates to: RFFSRQTDGGTASRW*SFRQRTSKDSLRKA
Trigger: AGCTTTCCTAAGTGAGTCTTTGGAGGTCCTTTGTCTGAATGACAACCATCTTGATGCTGTTCCCCCATCGGTCTGCCTGCTGAAGAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 72 bp TTCAGAGAGGTGAGAGACTTGAAGGAGTGCATAAATTaGACAGGGAGCTCTGTCAGCCTGTTGTCAGCTAGA +
Preference number: 6 (lower is better)
Translates to: FREVRDLKECIN*TGSSVSLLSAR
Trigger: TCTAGCTGACAACAGGCTGACAGAGCTCCCTGTCCAATTTATGCACTCCTTCAAGTCTCTCACCTCTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CCA 72 bp CTCTTTGTTTTAAGCCCATCTTCATTTTTGCCGAGCTaGTTTCTGGAGAGGTCCAGGGTCTTGAGTTGGGTG +
Preference number: 6 (lower is better)
Translates to: LFVLSPSSFLPS*FLERSRVLSWV
Trigger: CACCCAACTCAAGACCCTGGACCTCTCCAGAAACCAGCTCGGCAAAAATGAAGATGGGCTTAAAACAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CAA 72 bp ACAGCCATTTTGTCTGGCAGCGATTCCAGGGCATTTTaGGAGGCTTTACAACATTTCAAAGGGCAGGACCAG +
Preference number: 6 (lower is better)
Translates to: TAILSGSDSRAF*EALQHFKGQDQ
Trigger: CTGGTCCTGCCCTTTGAAATGTTGTAAAGCCTCCAAAAATGCCCTGGAATCGCTGCCAGACAAAATGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015277.14
CDS CAA 72 bp CGCAGCATGGTGTCTGCTGGGGCATTAGCAGAATTCTaGAACTTCTTGATATGGAACCTCTTCACAGCCACA +
Preference number: 6 (lower is better)
Translates to: RSMVSAGALAEF*NFLIWNLFTAT
Trigger: TGTGGCTGTGAAGAGGTTCCATATCAAGAAGTTCAAGAATTCTGCTAATGCCCCAGCAGACACCATGCTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2
CDS CAA 72 bp ATATGCTCCTTGGCGCTCAGCGACCACACTAGGATGTaGTCCGACTTGAGGTCACAGAAGATGATGTTTTTC +
Preference number: 6 (lower is better)
Translates to: ICSLALSDHTRM*SDLRSQKMMFF
Trigger: GAAAAACATCATCTTCTGTGACCTCAAGTCGGACAACATCCTAGTGTGGTCGCTGAGCGCCAAGGAGCATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000015277.14
ENSMUST00000145954.2