Pregenerated sensors for LRRIQ3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028182Ensembl transcript IDs: ENSMUST00000029833.13, ENSMUST00000192383.6, ENSMUST00000194376.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATAAAGAAGCACAGATTTGCCCATTAAGCTCTCCTAGGGCAAAATaGGGGCCAAGAAGGGCTGCTGTCCCTGCCAAGGAGTCAAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: HKEAQICPLSSPRAK*GPRRAAVPAKESRG Trigger: GCCTCTTGACTCCTTGGCAGGGACAGCAGCCCTTCTTGGCCCTCATTTTGCCCTAGGAGAGCTTAATGGGCAAATCTGTGCTTCTTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192383.6 |
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| 3UTR GCA 90 bp | TGTACAGCTGACATCCCTAGCGTCCAATCAGAGGCGAGTTCTCATTaGTGTTGTCCAGGGAGTGAAGTGCGTGATTCCTTTGTATTGATG | + |
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Preference number: 1 (lower is better) Translates to: CTADIPSVQSEASSH*CCPGSEVRDSFVLM Trigger: CATCAATACAAAGGAATCACGCACTTCACTCCCTGGACAACAGCAATGAGAACTCGCCTCTGATTGGACGCTAGGGATGTCAGCTGTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194376.2 |
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| 3UTR GCA 90 bp | CATAGATACATAGTGACCCTTCATGGGTGCAAAATCAACAGGATTTaGATTGTAGTCAGTACCAGAAACATCTGGGGATATCTTCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: HRYIVTLHGCKINRI*IVVSTRNIWGYLLS Trigger: AGAGAGAAGATATCCCCAGATGTTTCTGGTACTGACTACAATGCAAATCCTGTTGATTTTGCACCCATGAAGGGTCACTATGTATCTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| 3UTR-3UTR GCA 90 bp | CTGTTGTTGTTGTTGATGATGATGATGATGACGATGACGATGACGATGATGATGAGGGCCAAGAAGGGCTaGTGTCCCTGCCAAGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: LLLLLMMMMMTMTMTMMMRAKKG*CPCQGV Trigger: GACTCCTTGGCAGGGACAGCAGCCCTTCTTGGCCCT...CATCATCATCGTCATCGTCATCGTCATCATCATCATCATCAACAACAACAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192383.6 |
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| 3UTR CAA 90 bp | GATATCTTCTCTCTGATCCTGAACCTAGCTATCCCTAGATCTGTCTaGTGGAGAGCATGTCTTCCCAGTATGACCTTGAGATCCTTTAAG | + |
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Preference number: 2 (lower is better) Translates to: DIFSLILNLAIPRSV*WRACLPSMTLRSFK Trigger: CTTAAAGGATCTCAAGGTCATACTGGGAAGACATGCTCTCCACAAGACAGATCTAGGGATAGCTAGGTTCAGGATCAGAGAGAAGATATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| 3UTR-3UTR CCA 90 bp | ATATTGAAAGCAGCTTTACAACTGGTCGTTGTTAGAGCGATGAAAGCCTGCAGTCCTAGATCTGTCTTGTaGAGAGCATGTCTTCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: ILKAALQLVVVRAMKACSPRSVL*RACLPS Trigger: ACTGGGAAGACATGCTCTCCACAAGACAGATCTAGG...ACTGCAGGCTTTCATCGCTCTAACAACGACCAGTTGTAAAGCTGCTTTCAATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| 3UTR-3UTR GCA 90 bp | TATGTTGAGACAACACAAGAGGGCAAAATACTACAGTGGAAATTAAAGCGCATCAAAGAAGCACAGATTTaGCCATTAAGCTCTCCTAGG | + |
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Preference number: 2 (lower is better) Translates to: YVETTQEGKILQWKLKRIKEAQI*PLSSPR Trigger: CCTAGGAGAGCTTAATGGGCAAATCTGTGCTTCTTT...GATGCGCTTTAATTTCCACTGTAGTATTTTGCCCTCTTGTGTTGTCTCAACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192383.6 |
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| 3UTR-3UTR CCA 90 bp | ACAACACAAGAGGGCAAAATACTACAGTGGAAATTAAAGCGCATCCATTGGTGTTATTTTTCCCATCCTTaGGCTATAGCTAACATCTTT | + |
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Preference number: 2 (lower is better) Translates to: TTQEGKILQWKLKRIHWCYFSHP*AIANIF Trigger: AAAGATGTTAGCTATAGCCCAAGGATGGGAAAAATA...ACACCAATGGATGCGCTTTAATTTCCACTGTAGTATTTTGCCCTCTTGTGTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192383.6 |
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| 3UTR TCA 72 bp | GCACAGATTTGCCCATTAAGCTCTCCTAGGGCAAAATaGGGGCCAAGAAGGGCTGCTGTCCCTGCCAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: AQICPLSSPRAK*GPRRAAVPAKE Trigger: CTCCTTGGCAGGGACAGCAGCCCTTCTTGGCCCTCATTTTGCCCTAGGAGAGCTTAATGGGCAAATCTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192383.6 |
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| 3UTR GCA 72 bp | GACATCCCTAGCGTCCAATCAGAGGCGAGTTCTCATTaGTGTTGTCCAGGGAGTGAAGTGCGTGATTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: DIPSVQSEASSH*CCPGSEVRDSF Trigger: AAAGGAATCACGCACTTCACTCCCTGGACAACAGCAATGAGAACTCGCCTCTGATTGGACGCTAGGGATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194376.2 |
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| 3UTR CCA 72 bp | CTGATCCTGAACCTAGCTATCCCTAGATCTGTCTTGTaGAGAGCATGTCTTCCCAGTATGACCTTGAGATCC | + |
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Preference number: 3 (lower is better) Translates to: LILNLAIPRSVL*RACLPSMTLRS Trigger: GGATCTCAAGGTCATACTGGGAAGACATGCTCTCCACAAGACAGATCTAGGGATAGCTAGGTTCAGGATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| 3UTR GCA 72 bp | ATAGTGACCCTTCATGGGTGCAAAATCAACAGGATTTaGATTGTAGTCAGTACCAGAAACATCTGGGGATAT | + |
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Preference number: 3 (lower is better) Translates to: IVTLHGCKINRI*IVVSTRNIWGY Trigger: ATATCCCCAGATGTTTCTGGTACTGACTACAATGCAAATCCTGTTGATTTTGCACCCATGAAGGGTCACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| 3UTR-3UTR CAA 90 bp | TATGTTGAGACAACACAAGAGGGCAAAATACTACAGTGGAAATTAAAGCGCATCTTGTTGCTGTTGTTGTaGTTGATGATGATGATGATG | + |
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Preference number: 3 (lower is better) Translates to: YVETTQEGKILQWKLKRILLLLL*LMMMMM Trigger: CATCATCATCATCATCAACAACAACAACAGCAACAA...GATGCGCTTTAATTTCCACTGTAGTATTTTGCCCTCTTGTGTTGTCTCAACATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192383.6 |
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| 3UTR GCA 72 bp | GTAACTAAAATGAGAAACTTCCCTGTGCATAAGTTATaGCTGATTTTTGTTGTTGTTGCTGTTGTTGTTGTT | + |
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Preference number: 3 (lower is better) Translates to: VTKMRNFPVHKL*LIFVVVAVVVV Trigger: AACAACAACAACAGCAACAACAACAAAAATCAGGCATAACTTATGCACAGGGAAGTTTCTCATTTTAGTTAC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192383.6 |
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| CDS-3UTR GCA 90 bp | ACATCCCTAGCGTCCAATCAGAGGCGAGTTCTCATTGCTGTTGTCCAGGGAGTGAGAGAGATGCAGGTCTaGAGGTTCTCCATGGACTTC | + |
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Preference number: 4 (lower is better) Translates to: TSLASNQRRVLIAVVQGVREMQV*RFSMDF Trigger: GAAGTCCATGGAGAACCTGCAGACCTGCATCTCTCT...CACTCCCTGGACAACAGCAATGAGAACTCGCCTCTGATTGGACGCTAGGGATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194376.2 |
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| CDS-3UTR CCA 90 bp | CCTAGCGTCCAATCAGAGGCGAGTTCTCATTGCTGTTGTCCAGGGAGTGAAGTGTCTGCAGGTTCTCCATaGACTTCAGATGAAGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: PSVQSEASSHCCCPGSEVSAGSP*TSDEGH Trigger: GTGGCCTTCATCTGAAGTCCATGGAGAACCTGCAGA...CACTTCACTCCCTGGACAACAGCAATGAGAACTCGCCTCTGATTGGACGCTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194376.2 |
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| CDS-3UTR CCA 90 bp | GCTGACATCCCTAGCGTCCAATCAGAGGCGAGTTCTCATTGCTGTTGTCCAGGGTTTCTTCAGGCTCACTaGGCAGTCAAACATGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: ADIPSVQSEASSHCCCPGFLQAH*AVKHGQ Trigger: CTGACCATGTTTGACTGCCCAGTGAGCCTGAAGAAA...CCCTGGACAACAGCAATGAGAACTCGCCTCTGATTGGACGCTAGGGATGTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194376.2 |
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| CDS-3UTR TCA 90 bp | CTAGCGTCCAATCAGAGGCGAGTTCTCATTGCTGTTGTCCAGGGAGTGAAGTGCGAGGCCAGATACTGTTaGCAAGAACATGTCTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: LASNQRRVLIAVVQGVKCEARYC*QEHVCS Trigger: GCTACAGACATGTTCTTGTCAACAGTATCTGGCCTC...GCACTTCACTCCCTGGACAACAGCAATGAGAACTCGCCTCTGATTGGACGCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194376.2 |
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| CDS-3UTR TCA 90 bp | ACATCCCTAGCGTCCAATCAGAGGCGAGTTCTCATTGCTGTTGTCCAGGGAGTGGGAAGACGCCAGTTCTaGATGATTTCTTCATCGGAT | + |
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Preference number: 4 (lower is better) Translates to: TSLASNQRRVLIAVVQGVGRRQF*MISSSD Trigger: ATCCGATGAAGAAATCATTCAGAACTGGCGTCTTCC...CACTCCCTGGACAACAGCAATGAGAACTCGCCTCTGATTGGACGCTAGGGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194376.2 |
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| CDS-3UTR TCA 90 bp | GCTATCCCTAGATCTGTCTTGTGGAGAGCATGTCTTCCCAGTATGACCTTGAGACAGCTCTGCAGTGGCTaGATGTCAGTAAGGAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: AIPRSVLWRACLPSMTLRQLCSG*MSVRKL Trigger: CAACTTCCTTACTGACATTCAGCCACTGCAGAGCTG...TCTCAAGGTCATACTGGGAAGACATGCTCTCCACAAGACAGATCTAGGGATAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| CDS-3UTR TCA 90 bp | TTCCACCTCACACTTATCTTCTATGTACAGCTGACATCCCTAGCGTCCAATCAGCAGCTCTGCAGTGGCTaGATGTCAGTAAGGAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: FHLTLIFYVQLTSLASNQQLCSG*MSVRKL Trigger: CAACTTCCTTACTGACATTCAGCCACTGCAGAGCTG...CTGATTGGACGCTAGGGATGTCAGCTGTACATAGAAGATAAGTGTGAGGTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194376.2 |
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| CDS-3UTR CCA 90 bp | CCTAGCGTCCAATCAGAGGCGAGTTCTCATTGCTGTTGTCCAGGGAGTGAAGTGGGAAGAGTCTTTATCTaGTTTCCATGGAGATCAAGT | + |
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Preference number: 4 (lower is better) Translates to: PSVQSEASSHCCCPGSEVGRVFI*FPWRSS Trigger: ACTTGATCTCCATGGAAACCAGATAAAGACTCTTCC...CACTTCACTCCCTGGACAACAGCAATGAGAACTCGCCTCTGATTGGACGCTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194376.2 |
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| CDS-3UTR CCA 90 bp | GCTATCCCTAGATCTGTCTTGTGGAGAGCATGTCTTCCCAGTATGACCTTGAGATTTCTTCAGGCTCACTaGGCAGTCAAACATGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: AIPRSVLWRACLPSMTLRFLQAH*AVKHGQ Trigger: CTGACCATGTTTGACTGCCCAGTGAGCCTGAAGAAA...TCTCAAGGTCATACTGGGAAGACATGCTCTCCACAAGACAGATCTAGGGATAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| CDS-3UTR CCA 90 bp | CCTAGATCTGTCTTGTGGAGAGCATGTCTTCCCAGTATGACCTTGAGATCCTTTACGAGTGGCAGGAAATaGCTGGAGGTATTGTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: PRSVLWRACLPSMTLRSFTSGRK*LEVLWE Trigger: TTCCCACAATACCTCCAGCCATTTCCTGCCACTCGT...AAAGGATCTCAAGGTCATACTGGGAAGACATGCTCTCCACAAGACAGATCTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| CDS-3UTR TCA 90 bp | CCTAGATCTGTCTTGTGGAGAGCATGTCTTCCCAGTATGACCTTGAGATCCTTTGAGGCCAGATACTGTTaGCAAGAACATGTCTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: PRSVLWRACLPSMTLRSFEARYC*QEHVCS Trigger: GCTACAGACATGTTCTTGTCAACAGTATCTGGCCTC...AAAGGATCTCAAGGTCATACTGGGAAGACATGCTCTCCACAAGACAGATCTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| CDS-3UTR TCA 90 bp | CCTAGCGTCCAATCAGAGGCGAGTTCTCATTGCTGTTGTCCAGGGAGTGAAGTGGATAATCAACACTGGTaGATTATGAGCCAGAATTTC | + |
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Preference number: 4 (lower is better) Translates to: PSVQSEASSHCCCPGSEVDNQHW*IMSQNF Trigger: GAAATTCTGGCTCATAATTCACCAGTGTTGATTATC...CACTTCACTCCCTGGACAACAGCAATGAGAACTCGCCTCTGATTGGACGCTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194376.2 |
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| CDS-3UTR CCA 90 bp | TGCATTGTAGTCAGTACCAGAAACATCTGGGGATATCTTCTCTCTGATCCTGAAGTGGCTTTTGACGAGTaGCAGGAAATGGCTGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: CIVVSTRNIWGYLLSDPEVAFDE*QEMAGG Trigger: ACCTCCAGCCATTTCCTGCCACTCGTCAAAAGCCAC...TTCAGGATCAGAGAGAAGATATCCCCAGATGTTTCTGGTACTGACTACAATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| 3UTR CAA 72 bp | TCTCTGATCCTGAACCTAGCTATCCCTAGATCTGTCTaGTGGAGAGCATGTCTTCCCAGTATGACCTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: SLILNLAIPRSV*WRACLPSMTLR Trigger: TCTCAAGGTCATACTGGGAAGACATGCTCTCCACAAGACAGATCTAGGGATAGCTAGGTTCAGGATCAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| CDS-3UTR TCA 90 bp | GCTATCCCTAGATCTGTCTTGTGGAGAGCATGTCTTCCCAGTATGACCTTGAGAGACGCCAGTTCTGAATaGTTTCTTCATCGGATATCA | + |
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Preference number: 4 (lower is better) Translates to: AIPRSVLWRACLPSMTLRDASSE*FLHRIS Trigger: TGATATCCGATGAAGAAATCATTCAGAACTGGCGTC...TCTCAAGGTCATACTGGGAAGACATGCTCTCCACAAGACAGATCTAGGGATAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| CDS-3UTR TCA 90 bp | CCTAGATCTGTCTTGTGGAGAGCATGTCTTCCCAGTATGACCTTGAGATCCTTTGGAAGACGCCAGTTCTaGATGATTTCTTCATCGGAT | + |
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Preference number: 4 (lower is better) Translates to: PRSVLWRACLPSMTLRSFGRRQF*MISSSD Trigger: ATCCGATGAAGAAATCATTCAGAACTGGCGTCTTCC...AAAGGATCTCAAGGTCATACTGGGAAGACATGCTCTCCACAAGACAGATCTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| CDS-3UTR GCA 90 bp | ATATTGAAAGCAGCTTTACAACTGGTCGTTGTTAGAGCGATGAAAGCCTGCAGTAGAGAGATGCAGGTCTaGAGGTTCTCCATGGACTTC | + |
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Preference number: 4 (lower is better) Translates to: ILKAALQLVVVRAMKACSREMQV*RFSMDF Trigger: GAAGTCCATGGAGAACCTGCAGACCTGCATCTCTCT...ACTGCAGGCTTTCATCGCTCTAACAACGACCAGTTGTAAAGCTGCTTTCAATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| CDS-3UTR GCA 90 bp | TGCATTGTAGTCAGTACCAGAAACATCTGGGGATATCTTCTCTCTGATCCTGAAACACTCTCAGAGAGATaGAGGTCTGCAGGTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: CIVVSTRNIWGYLLSDPETLSER*RSAGSP Trigger: TGGAGAACCTGCAGACCTGCATCTCTCTGAGAGTGT...TTCAGGATCAGAGAGAAGATATCCCCAGATGTTTCTGGTACTGACTACAATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| CDS-3UTR GCA 90 bp | ATCCTGAACCTAGCTATCCCTAGATCTGTCTTGTGGAGAGCATGTCTTCCCAGTGGCTGCAAATTTTCTTaGTTCTTCCTCGTGCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: ILNLAIPRSVLWRACLPSGCKFS*FFLVLF Trigger: AAACAGCACGAGGAAGAAGCAAGAAAATTTGCAGCC...ACTGGGAAGACATGCTCTCCACAAGACAGATCTAGGGATAGCTAGGTTCAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| CDS-3UTR CCA 90 bp | TGCATTGTAGTCAGTACCAGAAACATCTGGGGATATCTTCTCTCTGATCCTGAATCTGCAGGTTCTCCATaGACTTCAGATGAAGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: CIVVSTRNIWGYLLSDPESAGSP*TSDEGH Trigger: GTGGCCTTCATCTGAAGTCCATGGAGAACCTGCAGA...TTCAGGATCAGAGAGAAGATATCCCCAGATGTTTCTGGTACTGACTACAATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| CDS-3UTR CCA 90 bp | ATATTGAAAGCAGCTTTACAACTGGTCGTTGTTAGAGCGATGAAAGCCTGCAGTTGCCAGCCCTCTGTGTaGCTAGAAACTCTCTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: ILKAALQLVVVRAMKACSCQPSV*LETLSF Trigger: AAAGGAGAGAGTTTCTAGCCACACAGAGGGCTGGCA...ACTGCAGGCTTTCATCGCTCTAACAACGACCAGTTGTAAAGCTGCTTTCAATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| CDS-3UTR TCA 90 bp | ACAACACAAGAGGGCAAAATACTACAGTGGAAATTAAAGCGCATCCATTGGTGTCAGCTCTGCAGTGGCTaGATGTCAGTAAGGAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: TTQEGKILQWKLKRIHWCQLCSG*MSVRKL Trigger: CAACTTCCTTACTGACATTCAGCCACTGCAGAGCTG...ACACCAATGGATGCGCTTTAATTTCCACTGTAGTATTTTGCCCTCTTGTGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192383.6 |
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| CDS-3UTR TCA 90 bp | CTTCCACCTCACACTTATCTTCTATGTACAGCTGACATCCCTAGCGTCCAATCAGACGCCAGTTCTGAATaGTTTCTTCATCGGATATCA | + |
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Preference number: 4 (lower is better) Translates to: LPPHTYLLCTADIPSVQSDASSE*FLHRIS Trigger: TGATATCCGATGAAGAAATCATTCAGAACTGGCGTC...TGATTGGACGCTAGGGATGTCAGCTGTACATAGAAGATAAGTGTGAGGTGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194376.2 |
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| CDS-3UTR GCA 90 bp | ACAACACAAGAGGGCAAAATACTACAGTGGAAATTAAAGCGCATCCATTGGTGTAGAGAGATGCAGGTCTaGAGGTTCTCCATGGACTTC | + |
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Preference number: 4 (lower is better) Translates to: TTQEGKILQWKLKRIHWCREMQV*RFSMDF Trigger: GAAGTCCATGGAGAACCTGCAGACCTGCATCTCTCT...ACACCAATGGATGCGCTTTAATTTCCACTGTAGTATTTTGCCCTCTTGTGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192383.6 |
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| CDS-3UTR GCA 90 bp | ACAACACAAGAGGGCAAAATACTACAGTGGAAATTAAAGCGCATCCATTGGTGTACACTCTCAGAGAGATaGAGGTCTGCAGGTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: TTQEGKILQWKLKRIHWCTLSER*RSAGSP Trigger: TGGAGAACCTGCAGACCTGCATCTCTCTGAGAGTGT...ACACCAATGGATGCGCTTTAATTTCCACTGTAGTATTTTGCCCTCTTGTGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192383.6 |
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| CDS-3UTR GCA 90 bp | CCTAGATCTGTCTTGTGGAGAGCATGTCTTCCCAGTATGACCTTGAGATCCTTTGATGTGATCTGGCATTaGTTCATTACGCCTTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: PRSVLWRACLPSMTLRSFDVIWH*FITPFV Trigger: CACAAAAGGCGTAATGAAGCAATGCCAGATCACATC...AAAGGATCTCAAGGTCATACTGGGAAGACATGCTCTCCACAAGACAGATCTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| CDS-3UTR CCA 90 bp | TGTACAGCTGACATCCCTAGCGTCCAATCAGAGGCGAGTTCTCATTGCTGTTGTTTTCATCTTCATAGGTaGTACCCTTTATCAATGCTG | + |
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Preference number: 4 (lower is better) Translates to: CTADIPSVQSEASSHCCCFHLHR*YPLSML Trigger: CAGCATTGATAAAGGGTACCACCTATGAAGATGAAA...ACAACAGCAATGAGAACTCGCCTCTGATTGGACGCTAGGGATGTCAGCTGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194376.2 |
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| CDS-3UTR CCA 90 bp | GCTATCCCTAGATCTGTCTTGTGGAGAGCATGTCTTCCCAGTATGACCTTGAGACCACGTATCCATCTTTaGATAATCAACACTGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: AIPRSVLWRACLPSMTLRPRIHL*IINTGE Trigger: TTCACCAGTGTTGATTATCCAAAGATGGATACGTGG...TCTCAAGGTCATACTGGGAAGACATGCTCTCCACAAGACAGATCTAGGGATAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| CDS-3UTR CCA 90 bp | TGCATTGTAGTCAGTACCAGAAACATCTGGGGATATCTTCTCTCTGATCCTGAAACATCATCAAACATGTaGAGCTTCATGCCAGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: CIVVSTRNIWGYLLSDPETSSNM*SFMPAL Trigger: GAGGGCTGGCATGAAGCTCCACATGTTTGATGATGT...TTCAGGATCAGAGAGAAGATATCCCCAGATGTTTCTGGTACTGACTACAATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| CDS-3UTR TCA 90 bp | ATCCTGAACCTAGCTATCCCTAGATCTGTCTTGTGGAGAGCATGTCTTCCCAGTGGAGTTTTAGGTTCTTaGGTCCACTCCAAAAATTTT | + |
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Preference number: 4 (lower is better) Translates to: ILNLAIPRSVLWRACLPSGVLGS*VHSKNF Trigger: AAAATTTTTGGAGTGGACTCAAGAACCTAAAACTCC...ACTGGGAAGACATGCTCTCCACAAGACAGATCTAGGGATAGCTAGGTTCAGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| CDS-3UTR GCA 90 bp | TGCATTGTAGTCAGTACCAGAAACATCTGGGGATATCTTCTCTCTGATCCTGAATTCCTGGGTAACTTGTaGTGTAACCATGGCTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: CIVVSTRNIWGYLLSDPEFLGNL*CNHGCK Trigger: TTTGCAGCCATGGTTACAGCACAAGTTACCCAGGAA...TTCAGGATCAGAGAGAAGATATCCCCAGATGTTTCTGGTACTGACTACAATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| CDS-3UTR CCA 90 bp | TATGTTGAGACAACACAAGAGGGCAAAATACTACAGTGGAAATTAAAGCGCATCTCTGCAGGTTCTCCATaGACTTCAGATGAAGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: YVETTQEGKILQWKLKRISAGSP*TSDEGH Trigger: GTGGCCTTCATCTGAAGTCCATGGAGAACCTGCAGA...GATGCGCTTTAATTTCCACTGTAGTATTTTGCCCTCTTGTGTTGTCTCAACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192383.6 |
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| 3UTR CAA 72 bp | CATAGTGACCCTTCATGGGTGCAAAATCAACAGGATTaGCATTGTAGTCAGTACCAGAAACATCTGGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: HSDPSWVQNQQD*HCSQYQKHLGI Trigger: TATCCCCAGATGTTTCTGGTACTGACTACAATGCAAATCCTGTTGATTTTGCACCCATGAAGGGTCACTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
||
| CDS-3UTR TCA 90 bp | CTGTTGTTGTTGTTGATGATGATGATGATGACGATGACGATGACGATGATGATGGGAAGACGCCAGTTCTaGATGATTTCTTCATCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLMMMMMTMTMTMMMGRRQF*MISSSD Trigger: ATCCGATGAAGAAATCATTCAGAACTGGCGTCTTCC...CATCATCATCGTCATCGTCATCGTCATCATCATCATCATCAACAACAACAACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192383.6 |
||
| CDS-3UTR CCA 90 bp | TATGTTGAGACAACACAAGAGGGCAAAATACTACAGTGGAAATTAAAGCGCATCTTTCTTCAGGCTCACTaGGCAGTCAAACATGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YVETTQEGKILQWKLKRIFLQAH*AVKHGQ Trigger: CTGACCATGTTTGACTGCCCAGTGAGCCTGAAGAAA...GATGCGCTTTAATTTCCACTGTAGTATTTTGCCCTCTTGTGTTGTCTCAACATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192383.6 |
||
| CDS-3UTR CCA 90 bp | TGTCCAGGGAGTGAAGTGCGTGATTCCTTTGTATTGATGAAAGGTGAGTACAGACCACGTATCCATCTTTaGATAATCAACACTGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CPGSEVRDSFVLMKGEYRPRIHL*IINTGE Trigger: TTCACCAGTGTTGATTATCCAAAGATGGATACGTGG...TCTGTACTCACCTTTCATCAATACAAAGGAATCACGCACTTCACTCCCTGGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194376.2 |
||
| CDS-3UTR TCA 90 bp | TCTAGCTATGTTGAGACAACACAAGAGGGCAAAATACTACAGTGGAAATTAAAGGAGGCCAGATACTGTTaGCAAGAACATGTCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSYVETTQEGKILQWKLKEARYC*QEHVCS Trigger: GCTACAGACATGTTCTTGTCAACAGTATCTGGCCTC...CTTTAATTTCCACTGTAGTATTTTGCCCTCTTGTGTTGTCTCAACATAGCTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192383.6 |
||
| CDS-3UTR GCA 90 bp | TGCATTGTAGTCAGTACCAGAAACATCTGGGGATATCTTCTCTCTGATCCTGAATGCTGTAACCATGGCTaGAAATTTTCTTGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CIVVSTRNIWGYLLSDPECCNHG*KFSCFF Trigger: GAAGAAGCAAGAAAATTTGCAGCCATGGTTACAGCA...TTCAGGATCAGAGAGAAGATATCCCCAGATGTTTCTGGTACTGACTACAATGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
||
| CDS-3UTR GCA 90 bp | TGTCCAGGGAGTGAAGTGCGTGATTCCTTTGTATTGATGAAAGGTGAGTACAGAATCTTGTTTCCAGTGTaGAACCTTCCCTTTTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: CPGSEVRDSFVLMKGEYRILFPV*NLPFYV Trigger: AACATAAAAGGGAAGGTTGCACACTGGAAACAAGAT...TCTGTACTCACCTTTCATCAATACAAAGGAATCACGCACTTCACTCCCTGGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194376.2 |
||
| CDS-3UTR CCA 90 bp | ATATTGAAAGCAGCTTTACAACTGGTCGTTGTTAGAGCGATGAAAGCCTGCAGTGGAAGAGTCTTTATCTaGTTTCCATGGAGATCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ILKAALQLVVVRAMKACSGRVFI*FPWRSS Trigger: ACTTGATCTCCATGGAAACCAGATAAAGACTCTTCC...ACTGCAGGCTTTCATCGCTCTAACAACGACCAGTTGTAAAGCTGCTTTCAATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
||
| CDS-3UTR TCA 90 bp | TATGTTGAGACAACACAAGAGGGCAAAATACTACAGTGGAAATTAAAGCGCATCGACGCCAGTTCTGAATaGTTTCTTCATCGGATATCA | + |
|
Preference number: 4 (lower is better) Translates to: YVETTQEGKILQWKLKRIDASSE*FLHRIS Trigger: TGATATCCGATGAAGAAATCATTCAGAACTGGCGTC...GATGCGCTTTAATTTCCACTGTAGTATTTTGCCCTCTTGTGTTGTCTCAACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192383.6 |
||
| CDS-3UTR TCA 90 bp | ATATTGAAAGCAGCTTTACAACTGGTCGTTGTTAGAGCGATGAAAGCCTGCAGTGATAATCAACACTGGTaGATTATGAGCCAGAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILKAALQLVVVRAMKACSDNQHW*IMSQNF Trigger: GAAATTCTGGCTCATAATTCACCAGTGTTGATTATC...ACTGCAGGCTTTCATCGCTCTAACAACGACCAGTTGTAAAGCTGCTTTCAATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
||
| CDS-3UTR TCA 90 bp | TGCATTGTAGTCAGTACCAGAAACATCTGGGGATATCTTCTCTCTGATCCTGAATGCTGTAAGCCTTTCTaGATTGTCTCATTATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CIVVSTRNIWGYLLSDPECCKPF*IVSLSF Trigger: AAAGGATAATGAGACAATTCAGAAAGGCTTACAGCA...TTCAGGATCAGAGAGAAGATATCCCCAGATGTTTCTGGTACTGACTACAATGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
||
| CDS-3UTR GCA 90 bp | ATATTGAAAGCAGCTTTACAACTGGTCGTTGTTAGAGCGATGAAAGCCTGCAGTCATTTGTTTCCAGTGTaGAACCTTCCCTTTTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: ILKAALQLVVVRAMKACSHLFPV*NLPFYV Trigger: AACATAAAAGGGAAGGTTGCACACTGGAAACAAATG...ACTGCAGGCTTTCATCGCTCTAACAACGACCAGTTGTAAAGCTGCTTTCAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
||
| CDS-3UTR CCA 90 bp | TGCATTGTAGTCAGTACCAGAAACATCTGGGGATATCTTCTCTCTGATCCTGAATTTATCTGGTTTCCATaGAGATCAAGTTTGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CIVVSTRNIWGYLLSDPEFIWFP*RSSLMS Trigger: GCTCATCAAACTTGATCTCCATGGAAACCAGATAAA...TTCAGGATCAGAGAGAAGATATCCCCAGATGTTTCTGGTACTGACTACAATGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
||
| CDS-3UTR CCA 90 bp | ACAACACAAGAGGGCAAAATACTACAGTGGAAATTAAAGCGCATCCATTGGTGTGGAAGAGTCTTTATCTaGTTTCCATGGAGATCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TTQEGKILQWKLKRIHWCGRVFI*FPWRSS Trigger: ACTTGATCTCCATGGAAACCAGATAAAGACTCTTCC...ACACCAATGGATGCGCTTTAATTTCCACTGTAGTATTTTGCCCTCTTGTGTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192383.6 |
||
| CDS-3UTR CCA 90 bp | ATATTGAAAGCAGCTTTACAACTGGTCGTTGTTAGAGCGATGAAAGCCTGCAGTTTTCATCTTCATAGGTaGTACCCTTTATCAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILKAALQLVVVRAMKACSFHLHR*YPLSML Trigger: CAGCATTGATAAAGGGTACCACCTATGAAGATGAAA...ACTGCAGGCTTTCATCGCTCTAACAACGACCAGTTGTAAAGCTGCTTTCAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
||
| CDS-3UTR CCA 90 bp | ACAACACAAGAGGGCAAAATACTACAGTGGAAATTAAAGCGCATCCATTGGTGTCCACGTATCCATCTTTaGATAATCAACACTGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TTQEGKILQWKLKRIHWCPRIHL*IINTGE Trigger: TTCACCAGTGTTGATTATCCAAAGATGGATACGTGG...ACACCAATGGATGCGCTTTAATTTCCACTGTAGTATTTTGCCCTCTTGTGTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192383.6 |
||
| CDS-3UTR CCA 90 bp | ATATTGAAAGCAGCTTTACAACTGGTCGTTGTTAGAGCGATGAAAGCCTGCAGTTTCAGTCTTTCAACTTaGGTAATTCCTTTGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ILKAALQLVVVRAMKACSFSLST*VIPLSR Trigger: TCTGCTCAAAGGAATTACCCAAGTTGAAAGACTGAA...ACTGCAGGCTTTCATCGCTCTAACAACGACCAGTTGTAAAGCTGCTTTCAATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
||
| CDS-3UTR TCA 90 bp | ACAACACAAGAGGGCAAAATACTACAGTGGAAATTAAAGCGCATCCATTGGTGTGGAGTTTTAGGTTCTTaGGTCCACTCCAAAAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: TTQEGKILQWKLKRIHWCGVLGS*VHSKNF Trigger: AAAATTTTTGGAGTGGACTCAAGAACCTAAAACTCC...ACACCAATGGATGCGCTTTAATTTCCACTGTAGTATTTTGCCCTCTTGTGTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000192383.6 |
||
| CDS-3UTR GCA 90 bp | CTGTTGTTGTTGTTGATGATGATGATGATGACGATGACGATGACGATGATGATGCATTTGTTTCCAGTGTaGAACCTTCCCTTTTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLMMMMMTMTMTMMMHLFPV*NLPFYV Trigger: AACATAAAAGGGAAGGTTGCACACTGGAAACAAATG...CATCATCATCGTCATCGTCATCGTCATCATCATCATCATCAACAACAACAACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192383.6 |
||
| CDS-3UTR CCA 90 bp | TATGTTGAGACAACACAAGAGGGCAAAATACTACAGTGGAAATTAAAGCGCATCTTTATCTGGTTTCCATaGAGATCAAGTTTGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YVETTQEGKILQWKLKRIFIWFP*RSSLMS Trigger: GCTCATCAAACTTGATCTCCATGGAAACCAGATAAA...GATGCGCTTTAATTTCCACTGTAGTATTTTGCCCTCTTGTGTTGTCTCAACATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192383.6 |
||
| CDS-3UTR TCA 90 bp | TCTAGCTATGTTGAGACAACACAAGAGGGCAAAATACTACAGTGGAAATTAAAGGATAATCAACACTGGTaGATTATGAGCCAGAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSYVETTQEGKILQWKLKDNQHW*IMSQNF Trigger: GAAATTCTGGCTCATAATTCACCAGTGTTGATTATC...CTTTAATTTCCACTGTAGTATTTTGCCCTCTTGTGTTGTCTCAACATAGCTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192383.6 |
||
| CDS-3UTR CCA 90 bp | GACGATGACGATGATGATGATTCCATTGAAAACCTCATAAAGAAGCACAGATTTTTTCATCTTCATAGGTaGTACCCTTTATCAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DDDDDDDSIENLIKKHRFFHLHR*YPLSML Trigger: CAGCATTGATAAAGGGTACCACCTATGAAGATGAAA...AAATCTGTGCTTCTTTATGAGGTTTTCAATGGAATCATCATCATCGTCATCGTC 37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000192383.6 |
||
| CDS TCA 90 bp | AGCCTTTCTTCAGGCTCACTGGGCAGTCAAACATGGTCAGCCCTATaGGGCTTACACAACCAGACAATACACAGATGTTCTTCAGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLSSGSLGSQTWSAL*GLHNQTIHRCSSVW Trigger: CCAAACTGAAGAACATCTGTGTATTGTCTGGTTGTGTAAGCCTCATAGGGCTGACCATGTTTGACTGCCCAGTGAGCCTGAAGAAAGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029833.13 ENSMUST00000192383.6 ENSMUST00000194376.2 |
||
| CDS-3UTR CAA 90 bp | CTAGCGTCCAATCAGAGGCGAGTTCTCATTGCTGTTGTCCAGGGAGTGAAGTGCATGTTGCATTCAGGCTaGATAAAGAAGAAATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LASNQRRVLIAVVQGVKCMLHSG*IKKKSS Trigger: GGAGGATTTCTTCTTTATCAAGCCTGAATGCAACAT...GCACTTCACTCCCTGGACAACAGCAATGAGAACTCGCCTCTGATTGGACGCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194376.2 |
||
| CDS-3UTR CAA 90 bp | CCTAGATCTGTCTTGTGGAGAGCATGTCTTCCCAGTATGACCTTGAGATCCTTTTCTTTCCTGGGTAACTaGTGCTGTAACCATGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PRSVLWRACLPSMTLRSFSFLGN*CCNHGC Trigger: GCAGCCATGGTTACAGCACAAGTTACCCAGGAAAGA...AAAGGATCTCAAGGTCATACTGGGAAGACATGCTCTCCACAAGACAGATCTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
||
| CDS-3UTR CAA 90 bp | ATCCCTAGCGTCCAATCAGAGGCGAGTTCTCATTGCTGTTGTCCAGGGAGTGAAATGTCAGTAAGGAAGTaGTTAGAGAAGATGCACACT | + |
|
Preference number: 5 (lower is better) Translates to: IPSVQSEASSHCCCPGSEMSVRK*LEKMHT Trigger: AGTGTGCATCTTCTCTAACAACTTCCTTACTGACAT...TTCACTCCCTGGACAACAGCAATGAGAACTCGCCTCTGATTGGACGCTAGGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194376.2 |
||
| CDS-3UTR CAA 90 bp | ATCCTGAACCTAGCTATCCCTAGATCTGTCTTGTGGAGAGCATGTCTTCCCAGTCCATGGAGATCAAGTTaGATGAGCTTTTTGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ILNLAIPRSVLWRACLPSPWRSS*MSFLQL Trigger: GAGCTGCAAAAAGCTCATCAAACTTGATCTCCATGG...ACTGGGAAGACATGCTCTCCACAAGACAGATCTAGGGATAGCTAGGTTCAGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
||
| CDS-3UTR CAA 90 bp | CCTAGATCTGTCTTGTGGAGAGCATGTCTTCCCAGTATGACCTTGAGATCCTTTTGGCTGCAAATTTTCTaGCTTCTTCCTCGTGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PRSVLWRACLPSMTLRSFWLQIF*LLPRAV Trigger: AACAGCACGAGGAAGAAGCAAGAAAATTTGCAGCCA...AAAGGATCTCAAGGTCATACTGGGAAGACATGCTCTCCACAAGACAGATCTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
||
| CDS-3UTR CAA 90 bp | CCTAGATCTGTCTTGTGGAGAGCATGTCTTCCCAGTATGACCTTGAGATCCTTTACTTGGGTAATTCCTTaGAGCAGAATGGACCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PRSVLWRACLPSMTLRSFTWVIP*SRMDLS Trigger: TGAGAGGTCCATTCTGCTCAAAGGAATTACCCAAGT...AAAGGATCTCAAGGTCATACTGGGAAGACATGCTCTCCACAAGACAGATCTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
||
| CDS TCA 90 bp | CCATGGAGATCAAGTTTGATGAGCTTTTTGCAGCTCTGCAGTGGCTaGATGTCAGTAAGGAAGTTGTTAGAGAAGATGCACACTCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PWRSSLMSFLQLCSG*MSVRKLLEKMHTLR Trigger: TCTGAGAGTGTGCATCTTCTCTAACAACTTCCTTACTGACATTCAGCCACTGCAGAGCTGCAAAAAGCTCATCAAACTTGATCTCCATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029833.13 ENSMUST00000192383.6 ENSMUST00000194376.2 |
||
| CDS-3UTR CAA 90 bp | GCTATCCCTAGATCTGTCTTGTGGAGAGCATGTCTTCCCAGTATGACCTTGAGAATGTCAGTAAGGAAGTaGTTAGAGAAGATGCACACT | + |
|
Preference number: 5 (lower is better) Translates to: AIPRSVLWRACLPSMTLRMSVRK*LEKMHT Trigger: AGTGTGCATCTTCTCTAACAACTTCCTTACTGACAT...TCTCAAGGTCATACTGGGAAGACATGCTCTCCACAAGACAGATCTAGGGATAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
||
| CDS-3UTR CAA 90 bp | TGTACAGCTGACATCCCTAGCGTCCAATCAGAGGCGAGTTCTCATTGCTGTTGTAGGAGTTTTAGGTTCTaGAGTCCACTCCAAAAATTT | + |
|
Preference number: 5 (lower is better) Translates to: CTADIPSVQSEASSHCCCRSFRF*SPLQKF Trigger: AAATTTTTGGAGTGGACTCAAGAACCTAAAACTCCT...ACAACAGCAATGAGAACTCGCCTCTGATTGGACGCTAGGGATGTCAGCTGTACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194376.2 |
||
| CDS-3UTR CAA 90 bp | ATATTGAAAGCAGCTTTACAACTGGTCGTTGTTAGAGCGATGAAAGCCTGCAGTAGCATTGCCCCGTACTaGAGTGATCTGGAGGAATAT | + |
|
Preference number: 5 (lower is better) Translates to: ILKAALQLVVVRAMKACSSIAPY*SDLEEY Trigger: ATATTCCTCCAGATCACTCAAGTACGGGGCAATGCT...ACTGCAGGCTTTCATCGCTCTAACAACGACCAGTTGTAAAGCTGCTTTCAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
||
| CDS-3UTR CAA 90 bp | GCTATCCCTAGATCTGTCTTGTGGAGAGCATGTCTTCCCAGTATGACCTTGAGAAGAATGGACCTCTCATaGTTGAGGGAAATAACTAAA | + |
|
Preference number: 5 (lower is better) Translates to: AIPRSVLWRACLPSMTLRRMDLS*LREITK Trigger: TTTAGTTATTTCCCTCAACAATGAGAGGTCCATTCT...TCTCAAGGTCATACTGGGAAGACATGCTCTCCACAAGACAGATCTAGGGATAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
||
| CDS-3UTR CAA 90 bp | CTGTTGTTGTTGTTGATGATGATGATGATGACGATGACGATGACGATGATGATGCCATGGAGATCAAGTTaGATGAGCTTTTTGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLLLLMMMMMTMTMTMMMPWRSS*MSFLQL Trigger: GAGCTGCAAAAAGCTCATCAAACTTGATCTCCATGG...CATCATCATCGTCATCGTCATCGTCATCATCATCATCATCAACAACAACAACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192383.6 |
||
| CDS-3UTR CAA 90 bp | ATATTGAAAGCAGCTTTACAACTGGTCGTTGTTAGAGCGATGAAAGCCTGCAGTAGATGTGATCTGGCATaGCTTCATTACGCCTTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: ILKAALQLVVVRAMKACSRCDLA*LHYAFC Trigger: ACAAAAGGCGTAATGAAGCAATGCCAGATCACATCT...ACTGCAGGCTTTCATCGCTCTAACAACGACCAGTTGTAAAGCTGCTTTCAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
||
| CDS-3UTR CAA 90 bp | ATATTGAAAGCAGCTTTACAACTGGTCGTTGTTAGAGCGATGAAAGCCTGCAGTATGTTGCATTCAGGCTaGATAAAGAAGAAATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ILKAALQLVVVRAMKACSMLHSG*IKKKSS Trigger: GGAGGATTTCTTCTTTATCAAGCCTGAATGCAACAT...ACTGCAGGCTTTCATCGCTCTAACAACGACCAGTTGTAAAGCTGCTTTCAATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
||
| CDS-3UTR CAA 90 bp | TGCATTGTAGTCAGTACCAGAAACATCTGGGGATATCTTCTCTCTGATCCTGAAAGGAGAATATCTCATTaGTTTCCAGTGTGCAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: CIVVSTRNIWGYLLSDPERRISH*FPVCNL Trigger: AAGGTTGCACACTGGAAACAAATGAGATATTCTCCT...TTCAGGATCAGAGAGAAGATATCCCCAGATGTTTCTGGTACTGACTACAATGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
||
| CDS-3UTR CAA 90 bp | TGCATTGTAGTCAGTACCAGAAACATCTGGGGATATCTTCTCTCTGATCCTGAAATGGACCTCTCATTGTaGAGGGAAATAACTAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: CIVVSTRNIWGYLLSDPEMDLSL*REITKD Trigger: GTCTTTAGTTATTTCCCTCAACAATGAGAGGTCCAT...TTCAGGATCAGAGAGAAGATATCCCCAGATGTTTCTGGTACTGACTACAATGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
||
| CDS-3UTR CAA 90 bp | TGCATTGTAGTCAGTACCAGAAACATCTGGGGATATCTTCTCTCTGATCCTGAAAGGAGTTTTAGGTTCTaGAGTCCACTCCAAAAATTT | + |
|
Preference number: 5 (lower is better) Translates to: CIVVSTRNIWGYLLSDPERSFRF*SPLQKF Trigger: AAATTTTTGGAGTGGACTCAAGAACCTAAAACTCCT...TTCAGGATCAGAGAGAAGATATCCCCAGATGTTTCTGGTACTGACTACAATGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
||
| CDS-3UTR CAA 90 bp | ATATTGAAAGCAGCTTTACAACTGGTCGTTGTTAGAGCGATGAAAGCCTGCAGTGTAAGCCTTTCTGAATaGTCTCATTATCCTTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ILKAALQLVVVRAMKACSVSLSE*SHYPFP Trigger: TGGAAAAGGATAATGAGACAATTCAGAAAGGCTTAC...ACTGCAGGCTTTCATCGCTCTAACAACGACCAGTTGTAAAGCTGCTTTCAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
||
| CDS-3UTR CAA 90 bp | TATGTTGAGACAACACAAGAGGGCAAAATACTACAGTGGAAATTAAAGCGCATCATGTCAGTAAGGAAGTaGTTAGAGAAGATGCACACT | + |
|
Preference number: 5 (lower is better) Translates to: YVETTQEGKILQWKLKRIMSVRK*LEKMHT Trigger: AGTGTGCATCTTCTCTAACAACTTCCTTACTGACAT...GATGCGCTTTAATTTCCACTGTAGTATTTTGCCCTCTTGTGTTGTCTCAACATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192383.6 |
||
| CDS-3UTR CAA 90 bp | TATGTTGAGACAACACAAGAGGGCAAAATACTACAGTGGAAATTAAAGCGCATCATGTTGCATTCAGGCTaGATAAAGAAGAAATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YVETTQEGKILQWKLKRIMLHSG*IKKKSS Trigger: GGAGGATTTCTTCTTTATCAAGCCTGAATGCAACAT...GATGCGCTTTAATTTCCACTGTAGTATTTTGCCCTCTTGTGTTGTCTCAACATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192383.6 |
||
| CDS-3UTR CAA 90 bp | TCTAGCTATGTTGAGACAACACAAGAGGGCAAAATACTACAGTGGAAATTAAAGAGGAGAATATCTCATTaGTTTCCAGTGTGCAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSYVETTQEGKILQWKLKRRISH*FPVCNL Trigger: AAGGTTGCACACTGGAAACAAATGAGATATTCTCCT...CTTTAATTTCCACTGTAGTATTTTGCCCTCTTGTGTTGTCTCAACATAGCTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192383.6 |
||
| CDS-3UTR CAA 90 bp | TCTAGCTATGTTGAGACAACACAAGAGGGCAAAATACTACAGTGGAAATTAAAGAGGAGTTTTAGGTTCTaGAGTCCACTCCAAAAATTT | + |
|
Preference number: 5 (lower is better) Translates to: SSYVETTQEGKILQWKLKRSFRF*SPLQKF Trigger: AAATTTTTGGAGTGGACTCAAGAACCTAAAACTCCT...CTTTAATTTCCACTGTAGTATTTTGCCCTCTTGTGTTGTCTCAACATAGCTAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000192383.6 |
||
| CDS TCA 72 bp | TCAGGCTCACTGGGCAGTCAAACATGGTCAGCCCTATaGGGCTTACACAACCAGACAATACACAGATGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SGSLGSQTWSAL*GLHNQTIHRCS Trigger: AGAACATCTGTGTATTGTCTGGTTGTGTAAGCCTCATAGGGCTGACCATGTTTGACTGCCCAGTGAGCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029833.13 ENSMUST00000192383.6 ENSMUST00000194376.2 |
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| CDS CCA 72 bp | CTTTTGACGAGTGGCAGGAAATGGCTGGAGGTATTGTaGGAAATAGTCCCATTTCATCTCCTTCAGCATTGC | + |
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Preference number: 6 (lower is better) Translates to: LLTSGRKWLEVL*EIVPFHLLQHC Trigger: GCAATGCTGAAGGAGATGAAATGGGACTATTTCCCACAATACCTCCAGCCATTTCCTGCCACTCGTCAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| CDS CAA 72 bp | TGGCTTTTGACGAGTGGCAGGAAATGGCTGGAGGTATaGTGGGAAATAGTCCCATTTCATCTCCTTCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: WLLTSGRKWLEV*WEIVPFHLLQH Trigger: ATGCTGAAGGAGATGAAATGGGACTATTTCCCACAATACCTCCAGCCATTTCCTGCCACTCGTCAAAAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| CDS CCA 72 bp | ACACTCTCAGAGAGATGCAGGTCTGCAGGTTCTCCATaGACTTCAGATGAAGGCCACTATACTTCACAAATA | + |
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Preference number: 6 (lower is better) Translates to: TLSERCRSAGSP*TSDEGHYTSQI Trigger: TATTTGTGAAGTATAGTGGCCTTCATCTGAAGTCCATGGAGAACCTGCAGACCTGCATCTCTCTGAGAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029833.13 ENSMUST00000192383.6 ENSMUST00000194376.2 |
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| CDS CCA 72 bp | TCTTTTAACTGGTGGCTTTTGACGAGTGGCAGGAAATaGCTGGAGGTATTGTGGGAAATAGTCCCATTTCAT | + |
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Preference number: 6 (lower is better) Translates to: SFNWWLLTSGRK*LEVLWEIVPFH Trigger: ATGAAATGGGACTATTTCCCACAATACCTCCAGCCATTTCCTGCCACTCGTCAAAAGCCACCAGTTAAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| CDS TCA 72 bp | TCAAGTTTGATGAGCTTTTTGCAGCTCTGCAGTGGCTaGATGTCAGTAAGGAAGTTGTTAGAGAAGATGCAC | + |
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Preference number: 6 (lower is better) Translates to: SSLMSFLQLCSG*MSVRKLLEKMH Trigger: GTGCATCTTCTCTAACAACTTCCTTACTGACATTCAGCCACTGCAGAGCTGCAAAAAGCTCATCAAACTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029833.13 ENSMUST00000192383.6 ENSMUST00000194376.2 |
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| CDS GCA 72 bp | AATATTTATCAACATCATCAAACATGTGGAGCTTCATaGCAGCCCTCTGTGTGGCTAGAAACTCTCTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: NIYQHHQTCGAS*QPSVWLETLSF Trigger: AAAGGAGAGAGTTTCTAGCCACACAGAGGGCTGGCATGAAGCTCCACATGTTTGATGATGTTGATAAATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| CDS GCA 72 bp | TCTAATGTTGACACTAGCTCTTTCCTGGGTAACTTGTaGTGTAACCATGGCTGCAAATTTTCTTGCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SNVDTSSFLGNL*CNHGCKFSCFF Trigger: GAAGAAGCAAGAAAATTTGCAGCCATGGTTACAGCACAAGTTACCCAGGAAAGAGCTAGTGTCAACATTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| CDS CAA 72 bp | TGGGTAATTCCTTTGAGCAGAATGGACCTCTCATTGTaGAGGGAAATAACTAAAGACTGGTCTGCAGCATTT | + |
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Preference number: 6 (lower is better) Translates to: WVIPLSRMDLSL*REITKDWSAAF Trigger: AAATGCTGCAGACCAGTCTTTAGTTATTTCCCTCAACAATGAGAGGTCCATTCTGCTCAAAGGAATTACCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| CDS TCA 72 bp | GCGAGTCTCTCCCTCCAAATTTGCTGTAAGCCTTTCTaGATTGTCTCATTATCCTTTTCCATTAGTTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: ASLSLQICCKPF*IVSLSFSISFL Trigger: AAGGAAACTAATGGAAAAGGATAATGAGACAATTCAGAAAGGCTTACAGCAAATTTGGAGGGAGAGACTCGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| CDS CAA 90 bp | TCTTGTTTCCAGTGTGCAACCTTCCCTTTTATGTTGCATTCAGGCTaGATAAAGAAGAAATCCTCCAAGTATTTGTCTTCATCACTTCTG | + |
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Preference number: 6 (lower is better) Translates to: SCFQCATFPFMLHSG*IKKKSSKYLSSSLL Trigger: CAGAAGTGATGAAGACAAATACTTGGAGGATTTCTTCTTTATCAAGCCTGAATGCAACATAAAAGGGAAGGTTGCACACTGGAAACAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194376.2 |
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| CDS GCA 72 bp | AAAATCAGCAGGAGAATATCTCATTTGTTTCCAGTGTaGAACCTTCCCTTTTATGTTGCATTCAGGCTTGAT | + |
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Preference number: 6 (lower is better) Translates to: KISRRISHLFPV*NLPFYVAFRLD Trigger: ATCAAGCCTGAATGCAACATAAAAGGGAAGGTTGCACACTGGAAACAAATGAGATATTCTCCTGCTGATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029833.13 ENSMUST00000192383.6 |
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| CDS CAA 72 bp | CAGTGTGCAACCTTCCCTTTTATGTTGCATTCAGGCTaGATAAAGAAGAAATCCTCCAAGTATTTGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: QCATFPFMLHSG*IKKKSSKYLSS Trigger: TGAAGACAAATACTTGGAGGATTTCTTCTTTATCAAGCCTGAATGCAACATAAAAGGGAAGGTTGCACACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029833.13 ENSMUST00000192383.6 ENSMUST00000194376.2 |
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| CDS CAA 72 bp | GTCTCTCCCTCCAAATTTGCTGTAAGCCTTTCTGAATaGTCTCATTATCCTTTTCCATTAGTTTCCTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: VSPSKFAVSLSE*SHYPFPLVSLS Trigger: TGACAAGGAAACTAATGGAAAAGGATAATGAGACAATTCAGAAAGGCTTACAGCAAATTTGGAGGGAGAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| CDS CAA 72 bp | ATGTGTTTCTTCAGTCTTTCAACTTGGGTAATTCCTTaGAGCAGAATGGACCTCTCATTGTTGAGGGAAATA | + |
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Preference number: 6 (lower is better) Translates to: MCFFSLSTWVIP*SRMDLSLLREI Trigger: TATTTCCCTCAACAATGAGAGGTCCATTCTGCTCAAAGGAATTACCCAAGTTGAAAGACTGAAGAAACACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| CDS CAA 72 bp | TTATCTTGTTTCCAGTGTGCAACCTTCCCTTTTATGTaGCATTCAGGCTTGATAAAGAAGAAATCCTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: LSCFQCATFPFM*HSGLIKKKSSK Trigger: CTTGGAGGATTTCTTCTTTATCAAGCCTGAATGCAACATAAAAGGGAAGGTTGCACACTGGAAACAAGATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194376.2 |
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| CDS CAA 90 bp | ATTTGTTTCCAGTGTGCAACCTTCCCTTTTATGTTGCATTCAGGCTaGATAAAGAAGAAATCCTCCAAGTATTTGTCTTCATCACTTCTG | + |
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Preference number: 6 (lower is better) Translates to: ICFQCATFPFMLHSG*IKKKSSKYLSSSLL Trigger: CAGAAGTGATGAAGACAAATACTTGGAGGATTTCTTCTTTATCAAGCCTGAATGCAACATAAAAGGGAAGGTTGCACACTGGAAACAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029833.13 ENSMUST00000192383.6 |
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| CDS CAA 90 bp | TCCGTACTCAGTAGAATATTTAAAATCAGCAGGAGAATATCTCATTaGTTTCCAGTGTGCAACCTTCCCTTTTATGTTGCATTCAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: SVLSRIFKISRRISH*FPVCNLPFYVAFRL Trigger: AAGCCTGAATGCAACATAAAAGGGAAGGTTGCACACTGGAAACAAATGAGATATTCTCCTGCTGATTTTAAATATTCTACTGAGTACGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029833.13 ENSMUST00000192383.6 |
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| CDS CAA 90 bp | GGTAGGCGAGTCTCTCCCTCCAAATTTGCTGTAAGCCTTTCTGAATaGTCTCATTATCCTTTTCCATTAGTTTCCTTGTCATATAAATTT | + |
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Preference number: 6 (lower is better) Translates to: GRRVSPSKFAVSLSE*SHYPFPLVSLSYKF Trigger: AAATTTATATGACAAGGAAACTAATGGAAAAGGATAATGAGACAATTCAGAAAGGCTTACAGCAAATTTGGAGGGAGAGACTCGCCTACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| CDS CCA 72 bp | AAATTTTTATCTGGAAGAGTCTTTATCTGGTTTCCATaGAGATCAAGTTTGATGAGCTTTTTGCAGCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: KFLSGRVFIWFP*RSSLMSFLQLC Trigger: GCAGAGCTGCAAAAAGCTCATCAAACTTGATCTCCATGGAAACCAGATAAAGACTCTTCCAGATAAAAATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029833.13 ENSMUST00000192383.6 ENSMUST00000194376.2 |
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| CDS CCA 72 bp | TTTAACTTTTCTCTAATGTTGACACTAGCTCTTTCCTaGGTAACTTGTGCTGTAACCATGGCTGCAAATTTT | + |
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Preference number: 6 (lower is better) Translates to: FNFSLMLTLALS*VTCAVTMAANF Trigger: AAAATTTGCAGCCATGGTTACAGCACAAGTTACCCAGGAAAGAGCTAGTGTCAACATTAGAGAAAAGTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029833.13 |
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| CDS CAA 90 bp | TTTATGTTGCATTCAGGCTTGATAAAGAAGAAATCCTCCAAGTATTaGTCTTCATCACTTCTGCCTATGCAGATCAATTTTGTTTCAAGC | + |
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Preference number: 6 (lower is better) Translates to: FMLHSGLIKKKSSKY*SSSLLPMQINFVSS Trigger: GCTTGAAACAAAATTGATCTGCATAGGCAGAAGTGATGAAGACAAATACTTGGAGGATTTCTTCTTTATCAAGCCTGAATGCAACATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029833.13 ENSMUST00000192383.6 ENSMUST00000194376.2 |
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| CDS CAA 72 bp | CATTCAGGCTTGATAAAGAAGAAATCCTCCAAGTATTaGTCTTCATCACTTCTGCCTATGCAGATCAATTTT | + |
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Preference number: 6 (lower is better) Translates to: HSGLIKKKSSKY*SSSLLPMQINF Trigger: AAAATTGATCTGCATAGGCAGAAGTGATGAAGACAAATACTTGGAGGATTTCTTCTTTATCAAGCCTGAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029833.13 ENSMUST00000192383.6 ENSMUST00000194376.2 |
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| CDS CAA 72 bp | AGTAGAATATTTAAAATCAGCAGGAGAATATCTCATTaGTTTCCAGTGTGCAACCTTCCCTTTTATGTTGCA | + |
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Preference number: 6 (lower is better) Translates to: SRIFKISRRISH*FPVCNLPFYVA Trigger: TGCAACATAAAAGGGAAGGTTGCACACTGGAAACAAATGAGATATTCTCCTGCTGATTTTAAATATTCTACT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029833.13 ENSMUST00000192383.6 |
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