Pregenerated sensors for LRRIQ1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019892Ensembl transcript IDs: ENSMUST00000020043.12, ENSMUST00000123364.2, ENSMUST00000166240.8, ENSMUST00000218841.2
Found 216 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAAGGAGAAATGTAAAGGAAGAGAAGAGGCCAAAGGCTTCCTTGTaGGTAGCACAGGTGGCTAGCACCCTACCCCCTATCTGTAAAAGA | + |
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Preference number: 1 (lower is better) Translates to: QRRNVKEEKRPKASL*VAQVASTLPPICKR Trigger: TCTTTTACAGATAGGGGGTAGGGTGCTAGCCACCTGTGCTACCCACAAGGAAGCCTTTGGCCTCTTCTCTTCCTTTACATTTCTCCTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR CCA 90 bp | GAGAAGAGGCCAAAGGCTTCCTTGTGGGTAGCACAGGTGGCTAGCACCCTACCCAGTCCGAGAGTTCTTTaGCCAGGGCAGCTGGTTGGA | + |
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Preference number: 4 (lower is better) Translates to: EKRPKASLWVAQVASTLPSPRVL*PGQLVG Trigger: TCCAACCAGCTGCCCTGGCCAAAGAACTCTCGGACT...GGGTAGGGTGCTAGCCACCTGTGCTACCCACAAGGAAGCCTTTGGCCTCTTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR GCA 90 bp | GAGAAGAGGCCAAAGGCTTCCTTGTGGGTAGCACAGGTGGCTAGCACCCTACCCGCCTCGCCTTCTGTATaGACAGAGGCATCTGCGTTA | + |
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Preference number: 4 (lower is better) Translates to: EKRPKASLWVAQVASTLPASPSV*TEASAL Trigger: TAACGCAGATGCCTCTGTGCATACAGAAGGCGAGGC...GGGTAGGGTGCTAGCCACCTGTGCTACCCACAAGGAAGCCTTTGGCCTCTTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR TCA 90 bp | GAAGAGAAGAGGCCAAAGGCTTCCTTGTGGGTAGCACAGGTGGCTAGCACCCTACCACCTTCTCCTCCCTaGCATGCTCCACATGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: EEKRPKASLWVAQVASTLPPSPP*HAPHVP Trigger: AGGAACATGTGGAGCATGTCAGGGAGGAGAAGGTGG...TAGGGTGCTAGCCACCTGTGCTACCCACAAGGAAGCCTTTGGCCTCTTCTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR GCA 90 bp | GAGAAGAGGCCAAAGGCTTCCTTGTGGGTAGCACAGGTGGCTAGCACCCTACCCTTCTTCTCTGAGCTTTaGCTCGCTGTCGTCACTGTC | + |
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Preference number: 4 (lower is better) Translates to: EKRPKASLWVAQVASTLPFFSEL*LAVVTV Trigger: GACAGTGACGACAGCGAGGCAAAGCTCAGAGAAGAA...GGGTAGGGTGCTAGCCACCTGTGCTACCCACAAGGAAGCCTTTGGCCTCTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR TCA 90 bp | GAAGAGAAGAGGCCAAAGGCTTCCTTGTGGGTAGCACAGGTGGCTAGCACCCTACGGAGAGACAGGATCTaGAGATTTGAGCACTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: EEKRPKASLWVAQVASTLRRDRI*RFEHSA Trigger: GGCAGAGTGCTCAAATCTTCAGATCCTGTCTCTCCG...TAGGGTGCTAGCCACCTGTGCTACCCACAAGGAAGCCTTTGGCCTCTTCTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR GCA 90 bp | GAGAAGAGGCCAAAGGCTTCCTTGTGGGTAGCACAGGTGGCTAGCACCCTACCCTGTGCAATAGCTTGCTaGTTGCCATGGCAATCTCCT | + |
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Preference number: 4 (lower is better) Translates to: EKRPKASLWVAQVASTLPCAIAC*LPWQSP Trigger: AGGAGATTGCCATGGCAAGCAGCAAGCTATTGCACA...GGGTAGGGTGCTAGCCACCTGTGCTACCCACAAGGAAGCCTTTGGCCTCTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR GCA 90 bp | GTAGCACAGGTGGCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTCCTGAGGCAGAATCCTaGAGGTCTGCCTCGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: VAQVASTLPPICKRSLAAPEAES*RSASPS Trigger: AGAAGGCGAGGCAGACCTGCAGGATTCTGCCTCAGG...AGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGCCACCTGTGCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR TCA 90 bp | GTGGCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCCCGGGTCTCCTCCATaGCTCCTTGTGCTTGTTTAC | + |
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Preference number: 4 (lower is better) Translates to: VASTLPPICKRSLAAAISPGSPP*LLVLVY Trigger: GTAAACAAGCACAAGGAGTCATGGAGGAGACCCGGG...GCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR TCA 90 bp | GAGAAGAGGCCAAAGGCTTCCTTGTGGGTAGCACAGGTGGCTAGCACCCTACCCCAGTTCTTCACAGTGTaGTGTAGAAGGTCTGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: EKRPKASLWVAQVASTLPQFFTV*CRRSED Trigger: GTCTTCAGACCTTCTACATCACACTGTGAAGAACTG...GGGTAGGGTGCTAGCCACCTGTGCTACCCACAAGGAAGCCTTTGGCCTCTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR GCA 90 bp | GAGAAGAGGCCAAAGGCTTCCTTGTGGGTAGCACAGGTGGCTAGCACCCTACCCAGGCAAGCATCTTCTTaGTTCTTTGAGTTGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: EKRPKASLWVAQVASTLPRQASS*FFELLS Trigger: GGACAGCAACTCAAAGAAGCAAGAAGATGCTTGCCT...GGGTAGGGTGCTAGCCACCTGTGCTACCCACAAGGAAGCCTTTGGCCTCTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR GCA 90 bp | AGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCTCATTGCACAGCCATaGCTGAGCTGGACGAACTGG | + |
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Preference number: 4 (lower is better) Translates to: STLPPICKRSLAAAISLGLIAQP*LSWTNW Trigger: CCAGTTCGTCCAGCTCAGGCATGGCTGTGCAATGAG...ACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR CCA 90 bp | GTAGCACAGGTGGCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTTTTGGCCAGGGCAGCTaGTTGGAGAGAGGCAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: VAQVASTLPPICKRSLAAFGQGS*LERGSV Trigger: AACACTGCCTCTCTCCAACCAGCTGCCCTGGCCAAA...AGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGCCACCTGTGCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR CCA 90 bp | GCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCCAGCCATGCCTGAGCTaGACGAACTGGTATGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: ASTLPPICKRSLAAAISLQPCLS*TNWYGR Trigger: CCTACCATACCAGTTCGTCCAGCTCAGGCATGGCTG...GAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR TCA 90 bp | GCTTCCTTGTGGGTAGCACAGGTGGCTAGCACCCTACCCCCTATCTGTAAAAGAGTCCTCAAATGCATGTaGCTGTCAGTCACTGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: ASLWVAQVASTLPPICKRVLKCM*LSVTVP Trigger: TGGCACAGTGACTGACAGTCACATGCATTTGAGGAC...TCTTTTACAGATAGGGGGTAGGGTGCTAGCCACCTGTGCTACCCACAAGGAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR CCA 90 bp | GTAGCACAGGTGGCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTTTGCAGCAGTTGCCTTaGAGACTGCCTCTTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: VAQVASTLPPICKRSLAALQQLP*RLPLPP Trigger: AGGAGGAAGAGGCAGTCTCCAAGGCAACTGCTGCAA...AGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGCCACCTGTGCTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR TCA 90 bp | GTAGCACAGGTGGCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTCTACAGCATGCAGAGTaGGAATGTCCCTCTTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: VAQVASTLPPICKRSLAALQHAE*ECPSSV Trigger: CACAGAAGAGGGACATTCTCACTCTGCATGCTGTAG...AGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGCCACCTGTGCTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR TCA 90 bp | GAGAAGAGGCCAAAGGCTTCCTTGTGGGTAGCACAGGTGGCTAGCACCCTACCCAGTAATTGTCTCTTCTaGGCTGTGTCTTCTTTGATG | + |
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Preference number: 4 (lower is better) Translates to: EKRPKASLWVAQVASTLPSNCLF*AVSSLM Trigger: CATCAAAGAAGACACAGCTCAGAAGAGACAATTACT...GGGTAGGGTGCTAGCCACCTGTGCTACCCACAAGGAAGCCTTTGGCCTCTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR GCA 90 bp | GAAGAGAAGAGGCCAAAGGCTTCCTTGTGGGTAGCACAGGTGGCTAGCACCCTACTCTTTCAACTCCTGTaGTCTCCTCCTCTTCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: EEKRPKASLWVAQVASTLLFQLL*SPPLLF Trigger: GAAAAGAAGAGGAGGAGAGCACAGGAGTTGAAAGAG...TAGGGTGCTAGCCACCTGTGCTACCCACAAGGAAGCCTTTGGCCTCTTCTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR GCA 90 bp | CCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATCAGTGGCTCAGTCCCTaGAAGGAAGTTAATCCACAG | + |
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Preference number: 4 (lower is better) Translates to: PYPLSVKEVLLLPLASVDQWLSP*KEVNPQ Trigger: CTGTGGATTAACTTCCTTGCAGGGACTGAGCCACTG...ATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR GCA 90 bp | ACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGAAGTTGCCTTGGAGACTaGCTCTTCCTCCTCATCTTG | + |
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Preference number: 4 (lower is better) Translates to: TLPPICKRSLAAAISLGRSCLGD*LFLLIL Trigger: CAAGATGAGGAGGAAGAGGCAGTCTCCAAGGCAACT...TCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR GCA 90 bp | GTGGCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCTTCCTTTGCAGCAGTTaGCTTGGAGACTGCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: VASTLPPICKRSLAAAISFLCSS*LGDCLF Trigger: GAAGAGGCAGTCTCCAAGGCAACTGCTGCAAAGGAA...GCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR CCA 90 bp | CCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATGAACGGAAACACACCTaGCAGAAGGAGCTAGACTTC | + |
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Preference number: 4 (lower is better) Translates to: PYPLSVKEVLLLPLASVDERKHT*QKELDF Trigger: GAAGTCTAGCTCCTTCTGCCAGGTGTGTTTCCGTTC...ATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR CCA 90 bp | GCTTCCTTGTGGGTAGCACAGGTGGCTAGCACCCTACCCCCTATCTGTAAAAGAGGCCATACTGGAGAATaGCTGATGGATCTAAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: ASLWVAQVASTLPPICKRGHTGE*LMDLKE Trigger: CTCCTTTAGATCCATCAGCCATTCTCCAGTATGGCC...TCTTTTACAGATAGGGGGTAGGGTGCTAGCCACCTGTGCTACCCACAAGGAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR CCA 90 bp | GAGAAGAGGCCAAAGGCTTCCTTGTGGGTAGCACAGGTGGCTAGCACCCTACCCGAGTATCTGTGTGTCTaGCTCTTTTTGTCTTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: EKRPKASLWVAQVASTLPEYLCV*LFLSLF Trigger: GAACAAAGACAAAAAGAGCCAGACACACAGATACTC...GGGTAGGGTGCTAGCCACCTGTGCTACCCACAAGGAAGCCTTTGGCCTCTTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR TCA 90 bp | AGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCAACCAGGCAAACCCTaGAATGTAATCACTGGAACC | + |
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Preference number: 4 (lower is better) Translates to: STLPPICKRSLAAAISLGQPGKP*NVITGT Trigger: GGTTCCAGTGATTACATTTCAGGGTTTGCCTGGTTG...ACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR TCA 90 bp | GAGAAGAGGCCAAAGGCTTCCTTGTGGGTAGCACAGGTGGCTAGCACCCTACCCAGTGATTTTATTATGTaGGAGTTCAAGGCTTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: EKRPKASLWVAQVASTLPSDFIM*EFKALE Trigger: CTCCAAAGCCTTGAACTCTCACATAATAAAATCACT...GGGTAGGGTGCTAGCCACCTGTGCTACCCACAAGGAAGCCTTTGGCCTCTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR TCA 90 bp | GCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCTCTCTGAGCAGAACATaGTTTCTTAAGGACGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: ASTLPPICKRSLAAAISLSLSRT*FLKDGG Trigger: GCCTCCGTCCTTAAGAAATCATGTTCTGCTCAGAGA...GAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR TCA 90 bp | CCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATACCTCTCAGTGGTATTaGCATCCCCTTGTTCATGTG | + |
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Preference number: 4 (lower is better) Translates to: PYPLSVKEVLLLPLASVDTSQWY*HPLVHV Trigger: CACATGAACAAGGGGATGTCAATACCACTGAGAGGT...ATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR TCA 90 bp | CCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATCTTCATTTCTATGAATaGGGCTCTGCTGTTGGAGCG | + |
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Preference number: 4 (lower is better) Translates to: PYPLSVKEVLLLPLASVDLHFYE*GSAVGA Trigger: CGCTCCAACAGCAGAGCCTCATTCATAGAAATGAAG...ATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR TCA 90 bp | CCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTTTGCACAGCCATGCCTaGGCTGGACGAACTGGTATG | + |
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Preference number: 4 (lower is better) Translates to: PLSVKEVLLLPLASVDSFLHSHA*AGRTGM Trigger: CATACCAGTTCGTCCAGCTCAGGCATGGCTGTGCAA...AAATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR GCA 90 bp | AGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTTTCATCGCAAGCTGCTaGACGTGTGTGTTTTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: STLPPICKRSLAAAISLGFIASC*TCVFSL Trigger: GAGAGAAAACACACACGTGCAGCAGCTTGCGATGAA...ACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR GCA 90 bp | CTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCTTCTCCTCCCTGACATaGTCCACATGTTCCTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: LPPICKRSLAAAISLGRFFSSLT*STCSSV Trigger: GACAGAGGAACATGTGGAGCATGTCAGGGAGGAGAA...GAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR GCA 90 bp | GTGGCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCTCCGATGGCCCACCTTaGTGTGTCATCTCTTTGATT | + |
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Preference number: 4 (lower is better) Translates to: VASTLPPICKRSLAAAISSDGPP*CVISLI Trigger: AATCAAAGAGATGACACAGCAAGGTGGGCCATCGGA...GCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR CCA 90 bp | GAGAAGAGGCCAAAGGCTTCCTTGTGGGTAGCACAGGTGGCTAGCACCCTACCCAAAGTGGCACAATTGTaGCTAAGCTGTTTTGTGAAA | + |
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Preference number: 4 (lower is better) Translates to: EKRPKASLWVAQVASTLPKVAQL*LSCFVK Trigger: TTTCACAAAACAGCTTAGCCACAATTGTGCCACTTT...GGGTAGGGTGCTAGCCACCTGTGCTACCCACAAGGAAGCCTTTGGCCTCTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| 3UTR CAA 72 bp | TGGCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTaGCTGCTGCCATTAGCCTCGGTCGATTCATTTGTG | + |
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Preference number: 4 (lower is better) Translates to: WLAPYPLSVKEV*LLPLASVDSFV Trigger: CACAAATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR TCA 90 bp | GAAGAGAAGAGGCCAAAGGCTTCCTTGTGGGTAGCACAGGTGGCTAGCACCCTAGTATCTTCTACGTCTTaGAGAATGAGTTCTTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: EEKRPKASLWVAQVASTLVSSTS*RMSSSA Trigger: TGCTGAAGAACTCATTCTTCAAGACGTAGAAGATAC...TAGGGTGCTAGCCACCTGTGCTACCCACAAGGAAGCCTTTGGCCTCTTCTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR TCA 90 bp | ACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATGCGCTGTCAGTGTTTaGGAAGTCTGGATGGTTTTT | + |
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Preference number: 4 (lower is better) Translates to: TLPPICKRSLAAAISLGRCAVSV*EVWMVF Trigger: AAAAACCATCCAGACTTCTCAAACACTGACAGCGCA...TCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR TCA 90 bp | CCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTGTTGGAGCGACTACTaGTCCTACTCTGCTCACTCT | + |
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Preference number: 4 (lower is better) Translates to: PPICKRSLAAAISLGRFICWSDY*SYSAHS Trigger: AGAGTGAGCAGAGTAGGATCAGTAGTCGCTCCAACA...AATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR GCA 90 bp | GTAGCACAGGTGGCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGACTGTCAGTCACTGTaGCATGGTTACAACCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: VAQVASTLPPICKRSLAADCQSL*HGYNLS Trigger: AGAAAGGTTGTAACCATGGCACAGTGACTGACAGTC...AGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGCCACCTGTGCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR GCA 90 bp | ACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGAACTTCCTTGCTTCGTTaGTCTTCTCTCTCTTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: TLPPICKRSLAAAISLGRTSLLR*SSLSCL Trigger: GAGACAAGAGAGAGAAGAGCAACGAAGCAAGGAAGT...TCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR GCA 90 bp | CCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATCTTGCTTCTTTGAGTTaGTGTCCACTGACTCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: PYPLSVKEVLLLPLASVDLASLS*CPLTLW Trigger: CCAAAGAGTCAGTGGACAGCAACTCAAAGAAGCAAG...ATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR GCA 90 bp | CTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTGTGCACTGGGAGCAAGCTTaGCTGAGGCAGAATCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: LSVKEVLLLPLASVDSFVHWEQA*LRQNPA Trigger: TGCAGGATTCTGCCTCAGGCAAGCTTGCTCCCAGTG...CACAAATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR GCA 90 bp | CTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCAGTCTGTCTACAGCATaGAGAGTGAGAATGTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: LPPICKRSLAAAISLGRFSLSTA*RVRMSL Trigger: GAGGGACATTCTCACTCTGCATGCTGTAGACAGACT...GAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR GCA 90 bp | CCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATATCCCCTTGTTCATGTaGACGTCTGCATTCATGACT | + |
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Preference number: 4 (lower is better) Translates to: PYPLSVKEVLLLPLASVDIPLFM*TSAFMT Trigger: AGTCATGAATGCAGACGTGCACATGAACAAGGGGAT...ATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS-3UTR GCA 90 bp | CTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCCTACTGATCCTACTCTaGTCACTCTTGTGCGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: LPPICKRSLAAAISLGRFLLILL*SLLCAI Trigger: TATGGCGCACAAGAGTGAGCAGAGTAGGATCAGTAG...GAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR GCA 90 bp | CCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATAAAGCCCTTCCAAACTaGCTGAATATGAAGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PYPLSVKEVLLLPLASVDKALPN*LNMKSS Trigger: GCTGCTCTTCATATTCAGGCAGTTTGGAAGGGCTTT...ATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCATTTTCTTTCTCATTaGACAGCCATGCCTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VASTLPPICKRSLAAAISHFLSH*TAMPEL Trigger: CAGCTCAGGCATGGCTGTGCAATGAGAAAGAAAATG...GCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR GCA 90 bp | GCTTCCTTGTGGGTAGCACAGGTGGCTAGCACCCTACCCCCTATCTGTAAAAGACAGGCAAAAAGTGATTaGATTTCAGGTTCCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ASLWVAQVASTLPPICKRQAKSD*ISGSWN Trigger: GTTCCAGGAACCTGAAATGCAATCACTTTTTGCCTG...TCTTTTACAGATAGGGGGTAGGGTGCTAGCCACCTGTGCTACCCACAAGGAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CCA 90 bp | AGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTAGTACCCTTACCCTTTaGCACATGTGCAATAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: STLPPICKRSLAAAISLGSTLTL*HMCNSL Trigger: CAAGCTATTGCACATGTGCCAAAGGGTAAGGGTACT...ACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CCA 90 bp | CCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTTACCAGCTTCTTCACTaGGAGCAAGCTTGCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLSVKEVLLLPLASVDSFYQLLH*EQACLR Trigger: CCTCAGGCAAGCTTGCTCCCAGTGAAGAAGCTGGTA...AAATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CCA 90 bp | CCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTTTAAGGCGTGTGCAGTaGCTCAGTCCCTGCAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLSVKEVLLLPLASVDSFLRRVQ*LSPCKE Trigger: TTCCTTGCAGGGACTGAGCCACTGCACACGCCTTAA...AAATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTGGATGGTTTTTGTTaGTTTCTGCTGCAGACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VASTLPPICKRSLAAAISLDGFC*FLLQTS Trigger: AGAGGTCTGCAGCAGAAACCAACAAAAACCATCCAG...GCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCTGCATTTCAGGTTCCTaGAACTGGTTGCTTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VASTLPPICKRSLAAAISCISGS*NWLLQE Trigger: TTCCTGAAGCAACCAGTTCCAGGAACCTGAAATGCA...GCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR TCA 90 bp | GTAGCACAGGTGGCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTAAAGACAATTGTTGCTaGCATCCAGCTTCTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VAQVASTLPPICKRSLAAKDNCC*HPASPK Trigger: CTTTGGAGAAGCTGGATGTCAGCAACAATTGTCTTT...AGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGCCACCTGTGCTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR TCA 90 bp | CTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTGTGGTACTGGGTTTCCAGTaGGACAAAGCTCACGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSVKEVLLLPLASVDSFVVLGFQ*DKAHGE Trigger: CTCTCCGTGAGCTTTGTCTCACTGGAAACCCAGTAC...CACAAATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR TCA 90 bp | GAAGAGAAGAGGCCAAAGGCTTCCTTGTGGGTAGCACAGGTGGCTAGCACCCTATTTCAGGTAATAAGTTaGACTCTTGAAGCTGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: EEKRPKASLWVAQVASTLFQVIS*TLEAGT Trigger: AGTACCAGCTTCAAGAGTTCAACTTATTACCTGAAA...TAGGGTGCTAGCCACCTGTGCTACCCACAAGGAAGCCTTTGGCCTCTTCTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR TCA 90 bp | GTAGCACAGGTGGCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGTCTTTATAGTACTGTaGGAGTCTGTCTACAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: VAQVASTLPPICKRSLAAVFIVL*ESVYSM Trigger: CATGCTGTAGACAGACTCTCACAGTACTATAAAGAC...AGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGCCACCTGTGCTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR TCA 90 bp | ACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGAGCACGTCTGCATTCATaGCTGAGTTTCATTAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLPPICKRSLAAAISLGRARLHS*LSFIKS Trigger: AGACTTAATGAAACTCAGTCATGAATGCAGACGTGC...TCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR TCA 90 bp | GTAGCACAGGTGGCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATAAGCTTTTCCTaGTTTCTTCCTCTCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VAQVASTLPPICKRSLAAAISFS*FLPLSS Trigger: AGAACTGAGAGGAAGAAATCAGGAAAAGCTTATGGC...AGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGCCACCTGTGCTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTTCTGTCGTATCTTTaGCTCCTTCTCTTTCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: VASTLPPICKRSLAAAISLLSYL*LLLFQL Trigger: GAGTTGAAAGAGAAGGAGGCAAAGATACGACAGAAG...GCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGCCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CCA 90 bp | GTAGCACAGGTGGCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTCTGATAGCTTCAATGTaGTTTTCCTGTGCATCGATG | + |
|
Preference number: 4 (lower is better) Translates to: VAQVASTLPPICKRSLAALIASM*FSCASM Trigger: CATCGATGCACAGGAAAACCACATTGAAGCTATCAG...AGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGCCACCTGTGCTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CCA 90 bp | CCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCAATGCCAGTAAGATaGTTATGTGAGCAATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PYPLSVKEVLLLPLASVDSMPVR*LCEQSR Trigger: CCTGGATTGCTCACATAACCATCTTACTGGCATTGA...ATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR TCA 90 bp | GTAGCACAGGTGGCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTCCAAGGAAGAGATGCTaGTTTTATCCAATTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VAQVASTLPPICKRSLAAPRKRC*FYPIQL Trigger: AAGCTGAATTGGATAAAATCAGCATCTCTTCCTTGG...AGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGCCACCTGTGCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR TCA 90 bp | CCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTTCTCGTCTTCCTCTTaGAAGGTCCGCTTTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PPICKRSLAAAISLGRFIFSSSS*KVRFSL Trigger: AAGAGAAAAGCGGACCTTTCAAGAGGAAGACGAGAA...AATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR TCA 90 bp | CCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTTAAGTGCAAGTTTCTaGTATGTTCCTCATGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PYPLSVKEVLLLPLASVDLSASF*YVPHAV Trigger: GACAGCATGAGGAACATATCAGAAACTTGCACTTAA...ATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCTTTAGCATTTGCTaGGCTGTAGAGATATCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: VASTLPPICKRSLAAAISLFSIC*AVEISL Trigger: TAAGGATATCTCTACAGCTCAGCAAATGCTAAAGAG...GCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR TCA 90 bp | CCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTAGCCTTGCCACAAGTTaGACTCTTCCACCATTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PPICKRSLAAAISLGRFISLATS*TLPPLS Trigger: ACTTAATGGTGGAAGAGTTCAACTTGTGGCAAGGCT...AATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR GCA 90 bp | GAAGAGAAGAGGCCAAAGGCTTCCTTGTGGGTAGCACAGGTGGCTAGCACCCTATCCTCCATTTTTAAGTaGAAGTTTCTGATATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EEKRPKASLWVAQVASTLSSIFK*KFLICS Trigger: GGAACATATCAGAAACTTGCACTTAAAAATGGAGGA...TAGGGTGCTAGCCACCTGTGCTACCCACAAGGAAGCCTTTGGCCTCTTCTCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR GCA 90 bp | CCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTGTTTTTGTTGGTTTCTaGTGCAGACCTCTCAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPICKRSLAAAISLGRFIVFVGF*CRPLSG Trigger: ACCACTGAGAGGTCTGCAGCAGAAACCAACAAAAAC...AATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR GCA 90 bp | ACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGAGGTAGGATGCATTTCTaGAGAGCAATTAATCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLPPICKRSLAAAISLGRGRMHF*RAINLS Trigger: AGACAGATTAATTGCTCTGCAGAAATGCATCCTACC...TCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR GCA 90 bp | CCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTAATCCGTGTCTTCTCTaGTTACAAGCCTTGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: PPICKRSLAAAISLGRFINPCLL*LQALPQ Trigger: TTGTGGCAAGGCTTGTAAGCAGAGAAGACACGGATT...AATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CCA 90 bp | CTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTGTGCCAGGTACACGATGGTaGGTGCTTCACAAAGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSVKEVLLLPLASVDSFVPGTRW*VLHKDL Trigger: AAGGTCTTTGTGAAGCACCCACCATCGTGTACCTGG...CACAAATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR TCA 90 bp | GTAGCACAGGTGGCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGATATAATGAAGAACTaGCTCTGGCAATTCAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VAQVASTLPPICKRSLAADIMKN*LWQFKQ Trigger: TTGCTTGAATTGCCAGAGTCAGTTCTTCATTATATC...AGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGCCACCTGTGCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTACATGTTCCTCTGTCTaGGTATCTGACTCTAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLSVKEVLLLPLASVDSFTCSSV*VSDSSP Trigger: AGGACTAGAGTCAGATACTCAGACAGAGGAACATGT...AAATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR TCA 90 bp | AGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCACTCACTTCTTGATTaGATCCAAATAGTTTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: STLPPICKRSLAAAISLGHSLLD*IQIVFR Trigger: CCGAAAAACTATTTGGATTCAATCAAGAAGTGAGTG...ACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR TCA 90 bp | AGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCATCCATCAAAACCATaGATAGAAGTCAGCAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: STLPPICKRSLAAAISLGHPSKP*IEVSRL Trigger: TAATCTGCTGACTTCTATTCATGGTTTTGATGGATG...ACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR GCA 90 bp | CCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTTTCTTCATCGCAAGCTaGTGCACGTGTGTGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLSVKEVLLLPLASVDSFFFIAS*CTCVFS Trigger: AGAAAACACACACGTGCAGCAGCTTGCGATGAAGAA...AAATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR GCA 90 bp | CTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTGTGGCTTCAGCCTTTGTCTaGTGTCCTTTTTCCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSVKEVLLLPLASVDSFVASAFV*CPFSRA Trigger: AGCTCTGGAAAAAGGACAGCAGACAAAGGCTGAAGC...CACAAATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR GCA 90 bp | GCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCTTGGGAAGAGATGTGTaGTTCAAAGTAATTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASTLPPICKRSLAAAISLLGRDV*FKVIVS Trigger: AGAGACAATTACTTTGAAGCACACATCTCTTCCCAA...GAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CCA 90 bp | CCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTGCTTGCTGCTTGCCATaGCAATCTCCTTTCTTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PPICKRSLAAAISLGRFIACCLP*QSPFFK Trigger: TTTAAAGAAAGGAGATTGCCATGGCAAGCAGCAAGC...AATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CCA 90 bp | CCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTAGGCATTGTATTTGGTaGGCACTTCACAAGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLSVKEVLLLPLASVDSFRHCIW*ALHKSP Trigger: AGGAGACTTGTGAAGTGCCCACCAAATACAATGCCT...AAATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTGCTGTGTCATCTCTTTaGTTTCTATCTCTTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLSVKEVLLLPLASVDSFAVSSL*FLSLQP Trigger: TGGCTGAAGAGATAGAAATCAAAGAGATGACACAGC...AAATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR TCA 90 bp | CTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTGTGAAGTCCTTCCACACTTaGGATGCTGTTGTCATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSVKEVLLLPLASVDSFVKSFHT*DAVVIQ Trigger: TTGGATGACAACAGCATCTCAAGTGTGGAAGGACTT...CACAAATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR GCA 90 bp | GTAGCACAGGTGGCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTTCTTGTTGTTTGTCCTaGCAAGCTTCAAAAGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: VAQVASTLPPICKRSLAASCCLS*QASKDF Trigger: AAAATCTTTTGAAGCTTGGCAGGACAAACAACAAGA...AGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGCCACCTGTGCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR GCA 90 bp | GTAGCACAGGTGGCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTCTGATATGTTCCTCATaGTGTCTGTATTTTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VAQVASTLPPICKRSLAALICSS*CLYFSF Trigger: GAAAGAAAAATACAGACAGCATGAGGAACATATCAG...AGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGCCACCTGTGCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR GCA 90 bp | CCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTTGAATTTTTACAGCTaGATCATACCGCAGTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PYPLSVKEVLLLPLASVDLNFYS*IIPQFE Trigger: TTCAAACTGCGGTATGATGCAGCTGTAAAAATTCAA...ATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR GCA 90 bp | CTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTGTGCTCCATGACTCCTTGTaGTTGTTTACTGTCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSVKEVLLLPLASVDSFVLHDSL*LFTVFC Trigger: GCAGAAGACAGTAAACAAGCACAAGGAGTCATGGAG...CACAAATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR GCA 90 bp | CCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTGATGGTAGGCTTTTCTaGATGGAAATAGGTGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PLSVKEVLLLPLASVDSFDGRLF*MEIGEL Trigger: TAGCTCACCTATTTCCATGCAGAAAAGCCTACCATC...AAATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTTCCAAAGAGACAAGATaGAAAAGTGGCACAATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLSVKEVLLLPLASVDSFSKETR*KSGTIV Trigger: CACAATTGTGCCACTTTTTCATCTTGTCTCTTTGGA...AAATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTGTGATTAGGAGGCATTGTATTTaGTGGGCACTTCACAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVKEVLLLPLASVDSFVIRRHCI*WALHKS Trigger: AGACTTGTGAAGTGCCCACCAAATACAATGCCTCCT...AATCACAAATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CCA 90 bp | CCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTTTGAGAAGTCTGGATaGTTTTTGTTGGTTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPICKRSLAAAISLGRFIFEKSG*FLLVSA Trigger: AGCAGAAACCAACAAAAACCATCCAGACTTCTCAAA...AATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR GCA 90 bp | CTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTGTGTCTGTTGTGGTAGGATaGATTTCTGCAGAGCAATTA | + |
|
Preference number: 4 (lower is better) Translates to: LSVKEVLLLPLASVDSFVSVVVG*ISAEQL Trigger: TAATTGCTCTGCAGAAATGCATCCTACCACAACAGA...CACAAATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR TCA 90 bp | TCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTGTGATTCTACGTCTTGAAGAATaGGTTCTTCAGCAGTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SVKEVLLLPLASVDSFVILRLEE*VLQQFY Trigger: GTAAAACTGCTGAAGAACTCATTCTTCAAGACGTAG...AATCACAAATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR GCA 90 bp | CCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTACTCATTGGAGAATCTaGCATCTTCATTTCTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLSVKEVLLLPLASVDSFTHWRI*HLHFYE Trigger: TTCATAGAAATGAAGATGGCAGATTCTCCAATGAGT...AAATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CCA 90 bp | CTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTGTGTCAGCGTTAAATTCTTaGTCAGAAGGTTGTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSVKEVLLLPLASVDSFVSALNS*SEGCSE Trigger: TTCAGAACAACCTTCTGACCAAGAATTTAACGCTGA...CACAAATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CCA 90 bp | CTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTGTGGTGATGATTACTCATTaGAGAATCTGCCATCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSVKEVLLLPLASVDSFVVMITH*RICHLH Trigger: ATGAAGATGGCAGATTCTCCAATGAGTAATCATCAC...CACAAATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR TCA 90 bp | TCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTGTGATTTGTCCCTCTTCTGTGTaGTATACTTTTCAGGTAATA | + |
|
Preference number: 4 (lower is better) Translates to: SVKEVLLLPLASVDSFVICPSSV*YTFQVI Trigger: TATTACCTGAAAAGTATATCACACAGAAGAGGGACA...AATCACAAATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTGTGATTTCATTAGAAGTAGTCTaGTTATTGATGAGGGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: SVKEVLLLPLASVDSFVISLEVV*LLMRGS Trigger: AGATCCCCTCATCAATAACCAGACTACTTCTAATGA...AATCACAAATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | GTAGCACAGGTGGCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTTCACTGGGAGCAAGCTaGCCTGAGGCAGAATCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VAQVASTLPPICKRSLAASLGAS*PEAESC Trigger: GCAGGATTCTGCCTCAGGCAAGCTTGCTCCCAGTGA...AGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGCCACCTGTGCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | GAGAAGAGGCCAAAGGCTTCCTTGTGGGTAGCACAGGTGGCTAGCACCCTACCCTCTGGATGGTTTTTGTaGGTTTCTGCTGCAGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: EKRPKASLWVAQVASTLPSGWFL*VSAADL Trigger: GAGGTCTGCAGCAGAAACCAACAAAAACCATCCAGA...GGGTAGGGTGCTAGCCACCTGTGCTACCCACAAGGAAGCCTTTGGCCTCTTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | ACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGAAAGTCCGAGAGTTCTTaGGCCAGGGCAGCTGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TLPPICKRSLAAAISLGRKSESS*ARAAGW Trigger: CCAACCAGCTGCCCTGGCCAAAGAACTCTCGGACTT...TCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | GAGAAGAGGCCAAAGGCTTCCTTGTGGGTAGCACAGGTGGCTAGCACCCTACCCTCTTGCTTCTTTGAGTaGCTGTCCACTGACTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: EKRPKASLWVAQVASTLPSCFFE*LSTDSL Trigger: CAAAGAGTCAGTGGACAGCAACTCAAAGAAGCAAGA...GGGTAGGGTGCTAGCCACCTGTGCTACCCACAAGGAAGCCTTTGGCCTCTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | GAAGAGAAGAGGCCAAAGGCTTCCTTGTGGGTAGCACAGGTGGCTAGCACCCTAACTACGCCATTGTGCTaGGATTACCATAGCTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: EEKRPKASLWVAQVASTLTTPLC*DYHSCL Trigger: AAGGCAGCTATGGTAATCCAAGCACAATGGCGTAGT...TAGGGTGCTAGCCACCTGTGCTACCCACAAGGAAGCCTTTGGCCTCTTCTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS TCA 90 bp | TGTCCCACCTTCTCCTCCCTGACATGCTCCACATGTTCCTCTGTCTaGGTATCTGACTCTAGTCCTTGCCACGGGTACTGTTCATTCACA | + |
|
Preference number: 5 (lower is better) Translates to: CPTFSSLTCSTCSSV*VSDSSPCHGYCSFT Trigger: TGTGAATGAACAGTACCCGTGGCAAGGACTAGAGTCAGATACTCAGACAGAGGAACATGTGGAGCATGTCAGGGAGGAGAAGGTGGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020043.12 ENSMUST00000166240.8 |
||
| CDS TCA 90 bp | AGTCCCTGCAAGGAAGTTAATCCACAGCGTCGGAGAGACAGGATCTaGAGATTTGAGCACTCTGCCAGTGTAGAGAGACTACAACCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SPCKEVNPQRRRDRI*RFEHSASVERLQPG Trigger: GCCTGGTTGTAGTCTCTCTACACTGGCAGAGTGCTCAAATCTTCAGATCCTGTCTCTCCGACGCTGTGGATTAACTTCCTTGCAGGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS CCA 90 bp | TCAATGTGGTTTTCCTGTGCATCGATGTACTTAAGGCGTGTGCAGTaGCTCAGTCCCTGCAAGGAAGTTAATCCACAGCGTCGGAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SMWFSCASMYLRRVQ*LSPCKEVNPQRRRD Trigger: GTCTCTCCGACGCTGTGGATTAACTTCCTTGCAGGGACTGAGCCACTGCACACGCCTTAAGTACATCGATGCACAGGAAAACCACATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | AGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCACATGTGCAATAGCTaGCTGCTTGCCATGGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: STLPPICKRSLAAAISLGHMCNS*LLAMAI Trigger: GATTGCCATGGCAAGCAGCAAGCTATTGCACATGTG...ACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | ACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGAAATGAGGCTCTGCTGTaGGAGCGACTACTGATCCTA | + |
|
Preference number: 5 (lower is better) Translates to: TLPPICKRSLAAAISLGRNEALL*ERLLIL Trigger: TAGGATCAGTAGTCGCTCCAACAGCAGAGCCTCATT...TCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | AGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCTCTTCCTCCTCATCTaGGGAAGAGATGTGTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: STLPPICKRSLAAAISLGLFLLI*GRDVCF Trigger: GAAGCACACATCTCTTCCCAAGATGAGGAGGAAGAG...ACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | GAAGAGAAGAGGCCAAAGGCTTCCTTGTGGGTAGCACAGGTGGCTAGCACCCTAAAGCCTTGCCACAAGTaGAACTCTTCCACCATTAAG | + |
|
Preference number: 5 (lower is better) Translates to: EEKRPKASLWVAQVASTLKPCHK*NSSTIK Trigger: CTTAATGGTGGAAGAGTTCAACTTGTGGCAAGGCTT...TAGGGTGCTAGCCACCTGTGCTACCCACAAGGAAGCCTTTGGCCTCTTCTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | AGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCACTTCCTTGCTTCGTaGCTCTTCTCTCTCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: STLPPICKRSLAAAISLGHFLAS*LFSLLS Trigger: AGACAAGAGAGAGAAGAGCAACGAAGCAAGGAAGTG...ACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS TCA 90 bp | AGTCTGGGCATGAAGGGTCTTGTTTTGCAGTGCGCTGTCAGTGTTTaGGAAGTCTGGATGGTTTTTGTTGGTTTCTGCTGCAGACCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLGMKGLVLQCAVSV*EVWMVFVGFCCRPL Trigger: GAGAGGTCTGCAGCAGAAACCAACAAAAACCATCCAGACTTCTCAAACACTGACAGCGCACTGCAAAACAAGACCCTTCATGCCCAGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS TCA 90 bp | GCCACTTCCCCAGCTGCCACTGAGTCGAACAGGATTGTCACGGAATaGTATGCGCTCTTTAATAGAAGGTCTTGTATGTGTTATCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ATSPAATESNRIVTE*YALFNRRSCMCYRW Trigger: CCAGCGATAACACATACAAGACCTTCTATTAAAGAGCGCATATCATTCCGTGACAATCCTGTTCGACTCAGTGGCAGCTGGGGAAGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218841.2 |
||
| CDS CCA 90 bp | TGTACTCCTGACTCCGTTCTAACTTTTCCTTTGCAGCAGTTGCCTTaGAGACTGCCTCTTCCTCCTCATCTTGGGAAGAGATGTGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: CTPDSVLTFPLQQLP*RLPLPPHLGKRCVL Trigger: AAGCACACATCTCTTCCCAAGATGAGGAGGAAGAGGCAGTCTCCAAGGCAACTGCTGCAAAGGAAAAGTTAGAACGGAGTCAGGAGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | CCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATCCTTCTGTCGTATCTTaGCCTCCTTCTCTTTCAACT | + |
|
Preference number: 5 (lower is better) Translates to: PYPLSVKEVLLLPLASVDPSVVS*PPSLST Trigger: AGTTGAAAGAGAAGGAGGCAAAGATACGACAGAAGG...ATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | ACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGAAGTCTTATCACTTCCTaGCTTCGTTGCTCTTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TLPPICKRSLAAAISLGRSLITS*LRCSSL Trigger: GAGAGAAGAGCAACGAAGCAAGGAAGTGATAAGACT...TCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCATGACTCCTTGTGCTaGTTTACTGTCTTCTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: VASTLPPICKRSLAAAISHDSLC*FTVFCT Trigger: AGTGCAGAAGACAGTAAACAAGCACAAGGAGTCATG...GCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | CTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCCTCCTCCATGACTCCTaGTGCTTGTTTACTGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LPPICKRSLAAAISLGRFLLHDS*CLFTVF Trigger: GAAGACAGTAAACAAGCACAAGGAGTCATGGAGGAG...GAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | CTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCTCTACAGGTTCAGGATaGTCTGGTGTCAGTGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: LPPICKRSLAAAISLGRFSTGSG*SGVSDG Trigger: ACCATCACTGACACCAGACAATCCTGAACCTGTAGA...GAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | AGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTGATCTAAAGGAGGCATaGTATTTGGTGGGCACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: STLPPICKRSLAAAISLGDLKEA*YLVGTS Trigger: TGAAGTGCCCACCAAATACAATGCCTCCTTTAGATC...ACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | GCTTCCTTGTGGGTAGCACAGGTGGCTAGCACCCTACCCCCTATCTGTAAAAGATCTTCCTACTTGTTTTaGAGTCAGGTGTCCAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: ASLWVAQVASTLPPICKRSSYLF*SQVSRI Trigger: TATCCTGGACACCTGACTCAAAAACAAGTAGGAAGA...TCTTTTACAGATAGGGGGTAGGGTGCTAGCCACCTGTGCTACCCACAAGGAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | CCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTTTCCTTTGCAGCAGTaGCCTTGGAGACTGCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PPICKRSLAAAISLGRFIFPLQQ*PWRLPL Trigger: AAGAGGCAGTCTCCAAGGCAACTGCTGCAAAGGAAA...AATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | CCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATGTTCTAACTTTTCCTTaGCAGCAGTTGCCTTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PYPLSVKEVLLLPLASVDVLTFP*QQLPWR Trigger: TCTCCAAGGCAACTGCTGCAAAGGAAAAGTTAGAAC...ATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS TCA 90 bp | TACTCGGACGACATCACATTTTCTTTCTCATTGCACAGCCATGCCTaGGCTGGACGAACTGGTATGGTAGGTGAAGTTTCGTCATGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: YSDDITFSFSLHSHA*AGRTGMVGEVSSCL Trigger: GAGACATGACGAAACTTCACCTACCATACCAGTTCGTCCAGCTCAGGCATGGCTGTGCAATGAGAAAGAAAATGTGATGTCGTCCGAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS GCA 90 bp | GGCGAGTGGGCATGTTCCCTCAGTCTTATCACTTCCTTGCTTCGTTaGTCTTCTCTCTCTTGTCTCAGGATGCTCTTTTTCTCTTCGTAT | + |
|
Preference number: 5 (lower is better) Translates to: GEWACSLSLITSLLR*SSLSCLRMLFFSSY Trigger: ATACGAAGAGAAAAAGAGCATCCTGAGACAAGAGAGAGAAGAGCAACGAAGCAAGGAAGTGATAAGACTGAGGGAACATGCCCACTCGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020043.12 ENSMUST00000123364.2 ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCGTAGCTCACTTAATCTaGTTCTCTCCTCCTCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: VASTLPPICKRSLAAAISVAHLI*FSPPPF Trigger: AAATGGAGGAGGAGAGAACAAGATTAAGTGAGCTAC...GCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGCCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | ACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGAAGATCAGAAAGACAATaGTTGCTGACATCCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TLPPICKRSLAAAISLGRRSERQ*LLTSSF Trigger: GAAGCTGGATGTCAGCAACAATTGTCTTTCTGATCT...TCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | CTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCAAGTCTGGATGGTTTTaGTTGGTTTCTGCTGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LPPICKRSLAAAISLGRFKSGWF*LVSAAD Trigger: GTCTGCAGCAGAAACCAACAAAAACCATCCAGACTT...GAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | CTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCTTCAGGAAAGCCAACTaGTGTATGAAGCCACTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LPPICKRSLAAAISLGRFFRKAN*CMKPLV Trigger: TACCAGTGGCTTCATACACAAGTTGGCTTTCCTGAA...GAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS TCA 90 bp | ATCGCAAGCTGCTGCACGTGTGTGTTTTCTCTCTTGTTTAATTGCTaGGCGAGGCAAGCATCTTCTTGCTTCTTTGAGTTGCTGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: IASCCTCVFSLLFNC*ARQASSCFFELLST Trigger: AGTGGACAGCAACTCAAAGAAGCAAGAAGATGCTTGCCTCGCTCAGCAATTAAACAAGAGAGAAAACACACACGTGCAGCAGCTTGCGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020043.12 ENSMUST00000123364.2 ENSMUST00000166240.8 |
||
| CDS CCA 90 bp | TGGCAATCTCCTTTCTTTAAAGCACAGGTAATGATCAGTGGCGAGTaGGCATGTTCCCTCAGTCTTATCACTTCCTTGCTTCGTTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: WQSPFFKAQVMISGE*ACSLSLITSLLRCS Trigger: AGAGCAACGAAGCAAGGAAGTGATAAGACTGAGGGAACATGCCCACTCGCCACTGATCATTACCTGTGCTTTAAAGAAAGGAGATTGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020043.12 ENSMUST00000123364.2 ENSMUST00000166240.8 |
||
| CDS CCA 90 bp | ATCTGGAGCAATCCACAATTTCCAATGCCGTCAATGCCAGTAAGATaGTTATGTGAGCAATCCAGGTACACGATGGTGGGTGCTTCACAA | + |
|
Preference number: 5 (lower is better) Translates to: IWSNPQFPMPSMPVR*LCEQSRYTMVGASQ Trigger: TTGTGAAGCACCCACCATCGTGTACCTGGATTGCTCACATAACCATCTTACTGGCATTGACGGCATTGGAAATTGTGGATTGCTCCAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS CCA 90 bp | AGGGTCTTGTTTTGCAGTGCGCTGTCAGTGTTTGAGAAGTCTGGATaGTTTTTGTTGGTTTCTGCTGCAGACCTCTCAGTGGTATTGACA | + |
|
Preference number: 5 (lower is better) Translates to: RVLFCSALSVFEKSG*FLLVSAADLSVVLT Trigger: TGTCAATACCACTGAGAGGTCTGCAGCAGAAACCAACAAAAACCATCCAGACTTCTCAAACACTGACAGCGCACTGCAAAACAAGACCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCTAGCACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCTGCTCTATAAGTGGCTaGAATTTTTACAGCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: VASTLPPICKRSLAAAISCSISG*NFYSCI Trigger: GATGCAGCTGTAAAAATTCAAGCCACTTATAGAGCA...GCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGTGCTAGCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | CCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTCATCTTCTTGCTTCTTaGAGTTGCTGTCCACTGACT | + |
|
Preference number: 5 (lower is better) Translates to: PPICKRSLAAAISLGRFIHLLAS*SCCPLT Trigger: AGTCAGTGGACAGCAACTCAAAGAAGCAAGAAGATG...AATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | CCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTAAGGAGGCATTGTATTaGGTGGGCACTTCACAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PLSVKEVLLLPLASVDSFKEALY*VGTSQV Trigger: GACTTGTGAAGTGCCCACCAAATACAATGCCTCCTT...AAATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | CCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATGTAAATTCTTCCTACTaGTTTTTGAGTCAGGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PYPLSVKEVLLLPLASVDVNSSY*FLSQVS Trigger: GGACACCTGACTCAAAAACAAGTAGGAAGAATTTAC...ATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS TCA 90 bp | TTTGAGCACTCTGCCAGTGTAGAGAGACTACAACCAGGCAAACCCTaGAATGTAATCACTGGAACCTGCTTTAAAGATTTCCAAGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FEHSASVERLQPGKP*NVITGTCFKDFQGP Trigger: TGGCCCTTGGAAATCTTTAAAGCAGGTTCCAGTGATTACATTTCAGGGTTTGCCTGGTTGTAGTCTCTCTACACTGGCAGAGTGCTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS TCA 90 bp | CAATCCACAATTTCCAATGCCGTCAATGCCAGTAAGATGGTTATGTaGGCAATCCAGGTACACGATGGTGGGTGCTTCACAAAGACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QSTISNAVNASKMVM*AIQVHDGGCFTKTF Trigger: AAAGGTCTTTGTGAAGCACCCACCATCGTGTACCTGGATTGCTCACATAACCATCTTACTGGCATTGACGGCATTGGAAATTGTGGATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS TCA 90 bp | CGCCATAAGCTTTTCCTGATTTCTTCCTCTCAGTTCTTCACAGTGTaGTGTAGAAGGTCTGAAGACAGTGTCCAACGGGTTTGGAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: RHKLFLISSSQFFTV*CRRSEDSVQRVWRS Trigger: ACTTCTCCAAACCCGTTGGACACTGTCTTCAGACCTTCTACATCACACTGTGAAGAACTGAGAGGAAGAAATCAGGAAAAGCTTATGGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS TCA 90 bp | CTACTGATCCTACTCTGCTCACTCTTGTGCGCCATAAGCTTTTCCTaGTTTCTTCCTCTCAGTTCTTCACAGTGTGATGTAGAAGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLILLCSLLCAISFS*FLPLSSSQCDVEGL Trigger: CAGACCTTCTACATCACACTGTGAAGAACTGAGAGGAAGAAATCAGGAAAAGCTTATGGCGCACAAGAGTGAGCAGAGTAGGATCAGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS GCA 90 bp | TGCATGGAAATAGGTGAGCTATTATTCTCATCCGATGGCCCACCTTaGTGTGTCATCTCTTTGATTTCTATCTCTTCAGCCAATCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CMEIGELLFSSDGPP*CVISLISISSANPS Trigger: GGAGGGATTGGCTGAAGAGATAGAAATCAAAGAGATGACACAGCAAGGTGGGCCATCGGATGAGAATAATAGCTCACCTATTTCCATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020043.12 ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | CCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTGCTGTGTCATCTCTTaGATTTCTATCTCTTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PPICKRSLAAAISLGRFICCVIS*ISISSA Trigger: GGCTGAAGAGATAGAAATCAAAGAGATGACACAGCA...AATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | ACCCTACCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGACTTCTCCCTCTGTTCTaGGATATCCATATTAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TLPPICKRSLAAAISLGRLLPLF*DIHISF Trigger: AAAACTAATATGGATATCCAAGAACAGAGGGAGAAG...TCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGGTAGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS GCA 90 bp | TCTTTGGCTATAGTACCCTTACCCTTTGGCACATGTGCAATAGCTTaGTGCTTGCCATGGCAATCTCCTTTCTTTAAAGCACAGGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: SLAIVPLPFGTCAIA*CLPWQSPFFKAQVM Trigger: CATTACCTGTGCTTTAAAGAAAGGAGATTGCCATGGCAAGCAGCAAGCTATTGCACATGTGCCAAAGGGTAAGGGTACTATAGCCAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020043.12 ENSMUST00000123364.2 ENSMUST00000166240.8 |
||
| CDS-3UTR CAA 90 bp | CCCCCTATCTGTAAAAGAAGTCTTGCTGCTGCCATTAGCCTCGGTCGATTCATTTGTGTCTGGCTCTTTTaGTCTTTGTTCACAGACAAA | + |
|
Preference number: 5 (lower is better) Translates to: PPICKRSLAAAISLGRFICVWLF*SLFTDK Trigger: TTTGTCTGTGAACAAAGACAAAAAGAGCCAGACACA...AATGAATCGACCGAGGCTAATGGCAGCAGCAAGACTTCTTTTACAGATAGGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS TCA 90 bp | ACTCTTCCACCATTAAGTACATCTGGATCTAACTCAGGCAAAAAGTaGTTGCATTTCAGGTTCCTGGAACTGGTTGCTTCAGGAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TLPPLSTSGSNSGKK*LHFRFLELVASGKP Trigger: TGGCTTTCCTGAAGCAACCAGTTCCAGGAACCTGAAATGCAATCACTTTTTGCCTGAGTTAGATCCAGATGTACTTAATGGTGGAAGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166240.8 ENSMUST00000218841.2 |
||
| CDS GCA 90 bp | GAGTACTGGGTTTCCAGTGAGACAAAGCTCACGGAGAGAGTAGCATaGATTGAACCAACACATGACATTTGTCAGATCAGAAAGACAATT | + |
|
Preference number: 5 (lower is better) Translates to: EYWVSSETKLTERVA*IEPTHDICQIRKTI Trigger: AATTGTCTTTCTGATCTGACAAATGTCATGTGTTGGTTCAATGCATGCTACTCTCTCCGTGAGCTTTGTCTCACTGGAAACCCAGTACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS TCA 90 bp | TCCATGACTCCTTGTGCTTGTTTACTGTCTTCTGCACTCACTTCTTaGTTGAATCCAAATAGTTTTTCGGTTTCTTGTCCCACCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SMTPCACLLSSALTS*LNPNSFSVSCPTFS Trigger: GGAGAAGGTGGGACAAGAAACCGAAAAACTATTTGGATTCAATCAAGAAGTGAGTGCAGAAGACAGTAAACAAGCACAAGGAGTCATGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020043.12 ENSMUST00000166240.8 |
||
| CDS TCA 90 bp | GAAAGACAATTGTTGCTGACATCCAGCTTCTCCAAAGAGACAAGATaGAAAAGTGGCACAATTGTGGCTAAGCTGTTTTGTGAAATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ERQLLLTSSFSKETR*KSGTIVAKLFCEML Trigger: AAGCATTTCACAAAACAGCTTAGCCACAATTGTGCCACTTTTTCATCTTGTCTCTTTGGAGAAGCTGGATGTCAGCAACAATTGTCTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS TCA 90 bp | AGCAGTTTTACTCTTGTTCTTTATGACGTTGATATAATGAAGAACTaGCTCTGGCAATTCAAGCAAATCAGTGTCACTACTGTCACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSFTLVLYDVDIMKN*LWQFKQISVTTVTL Trigger: CAGAGTGACAGTAGTGACACTGATTTGCTTGAATTGCCAGAGTCAGTTCTTCATTATATCAACGTCATAAAGAACAAGAGTAAAACTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020043.12 ENSMUST00000123364.2 ENSMUST00000166240.8 |
||
| CDS GCA 90 bp | TCTTGTAGCTCACTTAATCTTGTTCTCTCCTCCTCCATTTTTAAGTaGAAGTTTCTGATATGTTCCTCATGCTGTCTGTATTTTTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SCSSLNLVLSSSIFK*KFLICSSCCLYFSF Trigger: GAAAGAAAAATACAGACAGCATGAGGAACATATCAGAAACTTGCACTTAAAAATGGAGGAGGAGAGAACAAGATTAAGTGAGCTACAAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000020043.12 ENSMUST00000123364.2 ENSMUST00000166240.8 |
||
| CDS GCA 72 bp | CACTGTGACTACCAGCTTCTTCACTGGGAGCAAGCTTaGCTGAGGCAGAATCCTGCAGGTCTGCCTCGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: HCDYQLLHWEQA*LRQNPAGLPRL Trigger: AAGGCGAGGCAGACCTGCAGGATTCTGCCTCAGGCAAGCTTGCTCCCAGTGAAGAAGCTGGTAGTCACAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020043.12 ENSMUST00000166240.8 |
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| CDS GCA 72 bp | TCGATGTACTTAAGGCGTGTGCAGTGGCTCAGTCCCTaGAAGGAAGTTAATCCACAGCGTCGGAGAGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: SMYLRRVQWLSP*KEVNPQRRRDR Trigger: CCTGTCTCTCCGACGCTGTGGATTAACTTCCTTGCAGGGACTGAGCCACTGCACACGCCTTAAGTACATCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS CCA 72 bp | TGTCTCAAAGTCCGAGAGTTCTTTGGCCAGGGCAGCTaGTTGGAGAGAGGCAGTGTTTGTGAAGGGAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: CLKVREFFGQGS*LERGSVCEGKP Trigger: TGGCTTCCCTTCACAAACACTGCCTCTCTCCAACCAGCTGCCCTGGCCAAAGAACTCTCGGACTTTGAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS TCA 72 bp | CTATCTCTTCAGCCAATCCCTCCCGGGTCTCCTCCATaGCTCCTTGTGCTTGTTTACTGTCTTCTGCACTCA | + |
|
Preference number: 6 (lower is better) Translates to: LSLQPIPPGSPP*LLVLVYCLLHS Trigger: TGAGTGCAGAAGACAGTAAACAAGCACAAGGAGTCATGGAGGAGACCCGGGAGGGATTGGCTGAAGAGATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020043.12 ENSMUST00000166240.8 |
||
| CDS TCA 72 bp | TCTCATCCGATGGCCCACCTTGCTGTGTCATCTCTTTaGTTTCTATCTCTTCAGCCAATCCCTCCCGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SHPMAHLAVSSL*FLSLQPIPPGS Trigger: AGACCCGGGAGGGATTGGCTGAAGAGATAGAAATCAAAGAGATGACACAGCAAGGTGGGCCATCGGATGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020043.12 ENSMUST00000166240.8 |
||
| CDS GCA 72 bp | GCGAGTGGGCATGTTCCCTCAGTCTTATCACTTCCTTaGTTCGTTGCTCTTCTCTCTCTTGTCTCAGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: ASGHVPSVLSLP*FVALLSLVSGC Trigger: GCATCCTGAGACAAGAGAGAGAAGAGCAACGAAGCAAGGAAGTGATAAGACTGAGGGAACATGCCCACTCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020043.12 ENSMUST00000123364.2 ENSMUST00000166240.8 |
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| CDS CAA 72 bp | GGCGAGTGGGCATGTTCCCTCAGTCTTATCACTTCCTaGCTTCGTTGCTCTTCTCTCTCTTGTCTCAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: GEWACSLSLITS*LRCSSLSCLRM Trigger: CATCCTGAGACAAGAGAGAGAAGAGCAACGAAGCAAGGAAGTGATAAGACTGAGGGAACATGCCCACTCGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020043.12 ENSMUST00000123364.2 ENSMUST00000166240.8 |
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| CDS CAA 72 bp | TTCTCATCCGATGGCCCACCTTGCTGTGTCATCTCTTaGATTTCTATCTCTTCAGCCAATCCCTCCCGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: FSSDGPPCCVIS*ISISSANPSRV Trigger: GACCCGGGAGGGATTGGCTGAAGAGATAGAAATCAAAGAGATGACACAGCAAGGTGGGCCATCGGATGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020043.12 ENSMUST00000166240.8 |
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| CDS CAA 72 bp | ACTCCTGACTCCGTTCTAACTTTTCCTTTGCAGCAGTaGCCTTGGAGACTGCCTCTTCCTCCTCATCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: TPDSVLTFPLQQ*PWRLPLPPHLG Trigger: CCCAAGATGAGGAGGAAGAGGCAGTCTCCAAGGCAACTGCTGCAAAGGAAAAGTTAGAACGGAGTCAGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166240.8 ENSMUST00000218841.2 |
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| CDS CAA 90 bp | GAGCTATTATTCTCATCCGATGGCCCACCTTGCTGTGTCATCTCTTaGATTTCTATCTCTTCAGCCAATCCCTCCCGGGTCTCCTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: ELLFSSDGPPCCVIS*ISISSANPSRVSSM Trigger: CATGGAGGAGACCCGGGAGGGATTGGCTGAAGAGATAGAAATCAAAGAGATGACACAGCAAGGTGGGCCATCGGATGAGAATAATAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020043.12 ENSMUST00000166240.8 |
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| CDS CAA 90 bp | GGTAGGTGTACTCCTGACTCCGTTCTAACTTTTCCTTTGCAGCAGTaGCCTTGGAGACTGCCTCTTCCTCCTCATCTTGGGAAGAGATGT | + |
|
Preference number: 6 (lower is better) Translates to: GRCTPDSVLTFPLQQ*PWRLPLPPHLGKRC Trigger: ACATCTCTTCCCAAGATGAGGAGGAAGAGGCAGTCTCCAAGGCAACTGCTGCAAAGGAAAAGTTAGAACGGAGTCAGGAGTACACCTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166240.8 ENSMUST00000218841.2 |
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| CDS CCA 72 bp | TTTTCCTGTGCATCGATGTACTTAAGGCGTGTGCAGTaGCTCAGTCCCTGCAAGGAAGTTAATCCACAGCGT | + |
|
Preference number: 6 (lower is better) Translates to: FSCASMYLRRVQ*LSPCKEVNPQR Trigger: ACGCTGTGGATTAACTTCCTTGCAGGGACTGAGCCACTGCACACGCCTTAAGTACATCGATGCACAGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS CCA 72 bp | GACTCCGTTCTAACTTTTCCTTTGCAGCAGTTGCCTTaGAGACTGCCTCTTCCTCCTCATCTTGGGAAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: DSVLTFPLQQLP*RLPLPPHLGKR Trigger: TCTCTTCCCAAGATGAGGAGGAAGAGGCAGTCTCCAAGGCAACTGCTGCAAAGGAAAAGTTAGAACGGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166240.8 ENSMUST00000218841.2 |
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| CDS CAA 72 bp | CAATCCCTCCCGGGTCTCCTCCATGACTCCTTGTGCTaGTTTACTGTCTTCTGCACTCACTTCTTGATTGAA | + |
|
Preference number: 6 (lower is better) Translates to: QSLPGLLHDSLC*FTVFCTHFLIE Trigger: TTCAATCAAGAAGTGAGTGCAGAAGACAGTAAACAAGCACAAGGAGTCATGGAGGAGACCCGGGAGGGATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020043.12 ENSMUST00000166240.8 |
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| CDS CAA 72 bp | TTGCCACTTCCCCAGCTGCCACTGAGTCGAACAGGATaGTCACGGAATGATATGCGCTCTTTAATAGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LPLPQLPLSRTG*SRNDMRSLIEG Trigger: ACCTTCTATTAAAGAGCGCATATCATTCCGTGACAATCCTGTTCGACTCAGTGGCAGCTGGGGAAGTGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218841.2 |
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| CDS CAA 90 bp | TGGCGAGTGGGCATGTTCCCTCAGTCTTATCACTTCCTTGCTTCGTaGCTCTTCTCTCTCTTGTCTCAGGATGCTCTTTTTCTCTTCGTA | + |
|
Preference number: 6 (lower is better) Translates to: WRVGMFPQSYHFLAS*LFSLLSQDALFLFV Trigger: TACGAAGAGAAAAAGAGCATCCTGAGACAAGAGAGAGAAGAGCAACGAAGCAAGGAAGTGATAAGACTGAGGGAACATGCCCACTCGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020043.12 ENSMUST00000123364.2 ENSMUST00000166240.8 |
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| CDS CAA 90 bp | ATGATCAGTGGCGAGTGGGCATGTTCCCTCAGTCTTATCACTTCCTaGCTTCGTTGCTCTTCTCTCTCTTGTCTCAGGATGCTCTTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: MISGEWACSLSLITS*LRCSSLSCLRMLFF Trigger: GAAAAAGAGCATCCTGAGACAAGAGAGAGAAGAGCAACGAAGCAAGGAAGTGATAAGACTGAGGGAACATGCCCACTCGCCACTGATCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020043.12 ENSMUST00000123364.2 ENSMUST00000166240.8 |
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| CDS CAA 90 bp | AGGCAAGCATCTTCTTGCTTCTTTGAGTTGCTGTCCACTGACTCTTaGGCTATAGTACCCTTACCCTTTGGCACATGTGCAATAGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: RQASSCFFELLSTDS*AIVPLPFGTCAIAC Trigger: GCAAGCTATTGCACATGTGCCAAAGGGTAAGGGTACTATAGCCAAAGAGTCAGTGGACAGCAACTCAAAGAAGCAAGAAGATGCTTGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020043.12 ENSMUST00000123364.2 ENSMUST00000166240.8 |
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| CDS CAA 90 bp | ATTGGAGAATCTGCCATCTTCATTTCTATGAATGAGGCTCTGCTGTaGGAGCGACTACTGATCCTACTCTGCTCACTCTTGTGCGCCATA | + |
|
Preference number: 6 (lower is better) Translates to: IGESAIFISMNEALL*ERLLILLCSLLCAI Trigger: TATGGCGCACAAGAGTGAGCAGAGTAGGATCAGTAGTCGCTCCAACAGCAGAGCCTCATTCATAGAAATGAAGATGGCAGATTCTCCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS TCA 72 bp | TTAGATTCCGGCAATGACCCAGTCCTCAAATGCATGTaGCTGTCAGTCACTGTGCCATGGTTACAACCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LDSGNDPVLKCM*LSVTVPWLQPF Trigger: GAAAGGTTGTAACCATGGCACAGTGACTGACAGTCACATGCATTTGAGGACTGGGTCATTGCCGGAATCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020043.12 ENSMUST00000123364.2 ENSMUST00000166240.8 |
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| CDS TCA 72 bp | AAGGAAGTTAATCCACAGCGTCGGAGAGACAGGATCTaGAGATTTGAGCACTCTGCCAGTGTAGAGAGACTA | + |
|
Preference number: 6 (lower is better) Translates to: KEVNPQRRRDRI*RFEHSASVERL Trigger: TAGTCTCTCTACACTGGCAGAGTGCTCAAATCTTCAGATCCTGTCTCTCCGACGCTGTGGATTAACTTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS TCA 72 bp | CACTTGAGATGCTGTTGTCATCCAAATGCAGCTCTCTaGGCAGAACATGATTTCTTAAGGACGGAGGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: HLRCCCHPNAAL*AEHDFLRTEAL Trigger: GAGAGCCTCCGTCCTTAAGAAATCATGTTCTGCTCAGAGAGCTGCATTTGGATGACAACAGCATCTCAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS GCA 72 bp | GTACCCTTACCCTTTGGCACATGTGCAATAGCTTGCTaGTTGCCATGGCAATCTCCTTTCTTTAAAGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: VPLPFGTCAIAC*LPWQSPFFKAQ Trigger: CTGTGCTTTAAAGAAAGGAGATTGCCATGGCAAGCAGCAAGCTATTGCACATGTGCCAAAGGGTAAGGGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020043.12 ENSMUST00000123364.2 ENSMUST00000166240.8 |
||
| CDS GCA 72 bp | ATGAGGGGATCTTGCAGGGGTTCTGTTGTGGTAGGATaGATTTCTGCAGAGCAATTAATCTGTCTGTGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: MRGSCRGSVVVG*ISAEQLICLCA Trigger: TGCACACAGACAGATTAATTGCTCTGCAGAAATGCATCCTACCACAACAGAACCCCTGCAAGATCCCCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS CCA 72 bp | TTTTGCAGTGCGCTGTCAGTGTTTGAGAAGTCTGGATaGTTTTTGTTGGTTTCTGCTGCAGACCTCTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: FCSALSVFEKSG*FLLVSAADLSV Trigger: CACTGAGAGGTCTGCAGCAGAAACCAACAAAAACCATCCAGACTTCTCAAACACTGACAGCGCACTGCAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS CAA 72 bp | CTGTCTCATCCAGCACTGTCTCTTCTCGTCTTCCTCTaGAAAGGTCCGCTTTTCTCTTTCATTCTGAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LSHPALSLLVFL*KGPLFSFILSF Trigger: GAAGCTCAGAATGAAAGAGAAAAGCGGACCTTTCAAGAGGAAGACGAGAAGAGACAGTGCTGGATGAGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020043.12 ENSMUST00000123364.2 ENSMUST00000166240.8 |
||
| CDS CAA 72 bp | GCGCTGTCAGTGTTTGAGAAGTCTGGATGGTTTTTGTaGGTTTCTGCTGCAGACCTCTCAGTGGTATTGACA | + |
|
Preference number: 6 (lower is better) Translates to: ALSVFEKSGWFL*VSAADLSVVLT Trigger: TGTCAATACCACTGAGAGGTCTGCAGCAGAAACCAACAAAAACCATCCAGACTTCTCAAACACTGACAGCGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS CAA 72 bp | AGTGCGCTGTCAGTGTTTGAGAAGTCTGGATGGTTTTaGTTGGTTTCTGCTGCAGACCTCTCAGTGGTATTG | + |
|
Preference number: 6 (lower is better) Translates to: SALSVFEKSGWF*LVSAADLSVVL Trigger: CAATACCACTGAGAGGTCTGCAGCAGAAACCAACAAAAACCATCCAGACTTCTCAAACACTGACAGCGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS CAA 72 bp | TCTGCCATCTTCATTTCTATGAATGAGGCTCTGCTGTaGGAGCGACTACTGATCCTACTCTGCTCACTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SAIFISMNEALL*ERLLILLCSLL Trigger: CAAGAGTGAGCAGAGTAGGATCAGTAGTCGCTCCAACAGCAGAGCCTCATTCATAGAAATGAAGATGGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
||
| CDS CAA 90 bp | CTAACTCAGGCAAAAAGTGATTGCATTTCAGGTTCCTGGAACTGGTaGCTTCAGGAAAGCCAACTTGTGTATGAAGCCACTGGTAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LTQAKSDCISGSWNW*LQESQLVYEATGRC Trigger: ACACCTACCAGTGGCTTCATACACAAGTTGGCTTTCCTGAAGCAACCAGTTCCAGGAACCTGAAATGCAATCACTTTTTGCCTGAGTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166240.8 ENSMUST00000218841.2 |
||
| CDS TCA 72 bp | TTTTGTTGGTTTCTGCTGCAGACCTCTCAGTGGTATTaGCATCCCCTTGTTCATGTGCACGTCTGCATTCAT | + |
|
Preference number: 6 (lower is better) Translates to: FCWFLLQTSQWY*HPLVHVHVCIH Trigger: ATGAATGCAGACGTGCACATGAACAAGGGGATGTCAATACCACTGAGAGGTCTGCAGCAGAAACCAACAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS TCA 72 bp | ATGAAGGGTCTTGTTTTGCAGTGCGCTGTCAGTGTTTaGGAAGTCTGGATGGTTTTTGTTGGTTTCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: MKGLVLQCAVSV*EVWMVFVGFCC Trigger: GCAGCAGAAACCAACAAAAACCATCCAGACTTCTCAAACACTGACAGCGCACTGCAAAACAAGACCCTTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS TCA 72 bp | CCAGCTGCCACTGAGTCGAACAGGATTGTCACGGAATaGTATGCGCTCTTTAATAGAAGGTCTTGTATGTGT | + |
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Preference number: 6 (lower is better) Translates to: PAATESNRIVTE*YALFNRRSCMC Trigger: ACACATACAAGACCTTCTATTAAAGAGCGCATATCATTCCGTGACAATCCTGTTCGACTCAGTGGCAGCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218841.2 |
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| CDS GCA 72 bp | GCATGTTCCCTCAGTCTTATCACTTCCTTGCTTCGTTaGTCTTCTCTCTCTTGTCTCAGGATGCTCTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: ACSLSLITSLLR*SSLSCLRMLFF Trigger: GAAAAAGAGCATCCTGAGACAAGAGAGAGAAGAGCAACGAAGCAAGGAAGTGATAAGACTGAGGGAACATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020043.12 ENSMUST00000123364.2 ENSMUST00000166240.8 |
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| CDS GCA 72 bp | GACTGCCTCTTCCTCCTCATCTTGGGAAGAGATGTGTaGTTCAAAGTAATTGTCTCTTCTGAGCTGTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: DCLFLLILGRDV*FKVIVSSELCL Trigger: AAGACACAGCTCAGAAGAGACAATTACTTTGAAGCACACATCTCTTCCCAAGATGAGGAGGAAGAGGCAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS CCA 72 bp | CCTTTCTTTAAAGCACAGGTAATGATCAGTGGCGAGTaGGCATGTTCCCTCAGTCTTATCACTTCCTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: PFFKAQVMISGE*ACSLSLITSLL Trigger: AAGCAAGGAAGTGATAAGACTGAGGGAACATGCCCACTCGCCACTGATCATTACCTGTGCTTTAAAGAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020043.12 ENSMUST00000123364.2 ENSMUST00000166240.8 |
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| CDS CCA 72 bp | CCCTTTGGCACATGTGCAATAGCTTGCTGCTTGCCATaGCAATCTCCTTTCTTTAAAGCACAGGTAATGATC | + |
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Preference number: 6 (lower is better) Translates to: PFGTCAIACCLP*QSPFFKAQVMI Trigger: GATCATTACCTGTGCTTTAAAGAAAGGAGATTGCCATGGCAAGCAGCAAGCTATTGCACATGTGCCAAAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020043.12 ENSMUST00000123364.2 ENSMUST00000166240.8 |
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| CDS CCA 72 bp | AATCCACAATTTCCAATGCCGTCAATGCCAGTAAGATaGTTATGTGAGCAATCCAGGTACACGATGGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: NPQFPMPSMPVR*LCEQSRYTMVG Trigger: ACCCACCATCGTGTACCTGGATTGCTCACATAACCATCTTACTGGCATTGACGGCATTGGAAATTGTGGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS CAA 72 bp | GGCATGTTCCCTCAGTCTTATCACTTCCTTGCTTCGTaGCTCTTCTCTCTCTTGTCTCAGGATGCTCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: GMFPQSYHFLAS*LFSLLSQDALF Trigger: AAAAAGAGCATCCTGAGACAAGAGAGAGAAGAGCAACGAAGCAAGGAAGTGATAAGACTGAGGGAACATGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020043.12 ENSMUST00000123364.2 ENSMUST00000166240.8 |
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| CDS CAA 72 bp | TCAATTTCTTCATACTCTTCTCCAGATTCCTCATCTTaGATAGCCTTTCGGGCGGTCGCCAGCTTCTTTCGT | + |
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Preference number: 6 (lower is better) Translates to: SISSYSSPDSSS*IAFRAVASFFR Trigger: ACGAAAGAAGCTGGCGACCGCCCGAAAGGCTATCAAAGATGAGGAATCTGGAGAAGAGTATGAAGAAATTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS TCA 72 bp | TGCTGCACGTGTGTGTTTTCTCTCTTGTTTAATTGCTaGGCGAGGCAAGCATCTTCTTGCTTCTTTGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: CCTCVFSLLFNC*ARQASSCFFEL Trigger: CAACTCAAAGAAGCAAGAAGATGCTTGCCTCGCTCAGCAATTAAACAAGAGAGAAAACACACACGTGCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020043.12 ENSMUST00000123364.2 ENSMUST00000166240.8 |
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| CDS TCA 72 bp | CTTTTCCTGATTTCTTCCTCTCAGTTCTTCACAGTGTaGTGTAGAAGGTCTGAAGACAGTGTCCAACGGGTT | + |
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Preference number: 6 (lower is better) Translates to: LFLISSSQFFTV*CRRSEDSVQRV Trigger: AACCCGTTGGACACTGTCTTCAGACCTTCTACATCACACTGTGAAGAACTGAGAGGAAGAAATCAGGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS TCA 72 bp | CTACTCTGCTCACTCTTGTGCGCCATAAGCTTTTCCTaGTTTCTTCCTCTCAGTTCTTCACAGTGTGATGTA | + |
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Preference number: 6 (lower is better) Translates to: LLCSLLCAISFS*FLPLSSSQCDV Trigger: TACATCACACTGTGAAGAACTGAGAGGAAGAAATCAGGAAAAGCTTATGGCGCACAAGAGTGAGCAGAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS TCA 72 bp | ACTCATTGGAGAATCTGCCATCTTCATTTCTATGAATaGGGCTCTGCTGTTGGAGCGACTACTGATCCTACT | + |
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Preference number: 6 (lower is better) Translates to: THWRICHLHFYE*GSAVGATTDPT Trigger: AGTAGGATCAGTAGTCGCTCCAACAGCAGAGCCTCATTCATAGAAATGAAGATGGCAGATTCTCCAATGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS GCA 72 bp | ATAGTACCCTTACCCTTTGGCACATGTGCAATAGCTTaGTGCTTGCCATGGCAATCTCCTTTCTTTAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: IVPLPFGTCAIA*CLPWQSPFFKA Trigger: TGCTTTAAAGAAAGGAGATTGCCATGGCAAGCAGCAAGCTATTGCACATGTGCCAAAGGGTAAGGGTACTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020043.12 ENSMUST00000123364.2 ENSMUST00000166240.8 |
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| CDS GCA 72 bp | ATAGGTGAGCTATTATTCTCATCCGATGGCCCACCTTaGTGTGTCATCTCTTTGATTTCTATCTCTTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: IGELLFSSDGPP*CVISLISISSA Trigger: GGCTGAAGAGATAGAAATCAAAGAGATGACACAGCAAGGTGGGCCATCGGATGAGAATAATAGCTCACCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020043.12 ENSMUST00000166240.8 |
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| CDS GCA 72 bp | TCATTAGAAGTAGTCTGGTTATTGATGAGGGGATCTTaGAGGGGTTCTGTTGTGGTAGGATGCATTTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: SLEVVWLLMRGS*RGSVVVGCISA Trigger: TGCAGAAATGCATCCTACCACAACAGAACCCCTGCAAGATCCCCTCATCAATAACCAGACTACTTCTAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS GCA 72 bp | CAGGTGTCCAGGATAAAATTCCGCTTTCTGATCTGCTaGTTAACTGTGTGTACTCGGACGACATCACATTTT | + |
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Preference number: 6 (lower is better) Translates to: QVSRIKFRFLIC*LTVCTRTTSHF Trigger: AAAATGTGATGTCGTCCGAGTACACACAGTTAAGCAGCAGATCAGAAAGCGGAATTTTATCCTGGACACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS CAA 72 bp | AAACAGAGCAAGTCAGGACACCATCAGCTTCAGCCTTaGTCTGCTGTCCTTTTTCCAGAGCTTCTTGAATTT | + |
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Preference number: 6 (lower is better) Translates to: KQSKSGHHQLQP*SAVLFPELLEF Trigger: AAATTCAAGAAGCTCTGGAAAAAGGACAGCAGACAAAGGCTGAAGCTGATGGTGTCCTGACTTGCTCTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020043.12 ENSMUST00000166240.8 |
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| CDS CAA 72 bp | TTCATTAGAAGTAGTCTGGTTATTGATGAGGGGATCTaGCAGGGGTTCTGTTGTGGTAGGATGCATTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: FIRSSLVIDEGI*QGFCCGRMHFC Trigger: GCAGAAATGCATCCTACCACAACAGAACCCCTGCAAGATCCCCTCATCAATAACCAGACTACTTCTAATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS TCA 72 bp | TCTGCCAGTGTAGAGAGACTACAACCAGGCAAACCCTaGAATGTAATCACTGGAACCTGCTTTAAAGATTTC | + |
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Preference number: 6 (lower is better) Translates to: SASVERLQPGKP*NVITGTCFKDF Trigger: GAAATCTTTAAAGCAGGTTCCAGTGATTACATTTCAGGGTTTGCCTGGTTGTAGTCTCTCTACACTGGCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS GCA 72 bp | TCAGGATTGTCTGGTGTCAGTGATGGTAGGCTTTTCTaGATGGAAATAGGTGAGCTATTATTCTCATCCGAT | + |
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Preference number: 6 (lower is better) Translates to: SGLSGVSDGRLF*MEIGELLFSSD Trigger: ATCGGATGAGAATAATAGCTCACCTATTTCCATGCAGAAAAGCCTACCATCACTGACACCAGACAATCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020043.12 ENSMUST00000166240.8 |
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| CDS GCA 72 bp | ATCTTGCAGGGGTTCTGTTGTGGTAGGATGCATTTCTaGAGAGCAATTAATCTGTCTGTGTGCAATGTAACT | + |
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Preference number: 6 (lower is better) Translates to: ILQGFCCGRMHF*RAINLSVCNVT Trigger: AGTTACATTGCACACAGACAGATTAATTGCTCTGCAGAAATGCATCCTACCACAACAGAACCCCTGCAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS CAA 72 bp | TCTTATCACTTCCTTGCTTCGTTGCTCTTCTCTCTCTaGTCTCAGGATGCTCTTTTTCTCTTCGTATTCCCT | + |
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Preference number: 6 (lower is better) Translates to: SYHFLASLLFSL*SQDALFLFVFP Trigger: AGGGAATACGAAGAGAAAAAGAGCATCCTGAGACAAGAGAGAGAAGAGCAACGAAGCAAGGAAGTGATAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020043.12 ENSMUST00000123364.2 ENSMUST00000166240.8 |
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| CDS CAA 72 bp | TCTTCTAGTGTTACACTTCTTTCTACAGGTTCAGGATaGTCTGGTGTCAGTGATGGTAGGCTTTTCTGCATG | + |
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Preference number: 6 (lower is better) Translates to: SSSVTLLSTGSG*SGVSDGRLFCM Trigger: CATGCAGAAAAGCCTACCATCACTGACACCAGACAATCCTGAACCTGTAGAAAGAAGTGTAACACTAGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020043.12 ENSMUST00000166240.8 |
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| CDS TCA 72 bp | CATCCCCTTGTTCATGTGCACGTCTGCATTCATGACTaGGTTTCATTAAGTCTTTATAGTACTGTGAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: HPLVHVHVCIHD*VSLSLYSTVRV Trigger: GACTCTCACAGTACTATAAAGACTTAATGAAACTCAGTCATGAATGCAGACGTGCACATGAACAAGGGGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS TCA 72 bp | CCATTAAGTACATCTGGATCTAACTCAGGCAAAAAGTaGTTGCATTTCAGGTTCCTGGAACTGGTTGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PLSTSGSNSGKK*LHFRFLELVAS Trigger: TGAAGCAACCAGTTCCAGGAACCTGAAATGCAATCACTTTTTGCCTGAGTTAGATCCAGATGTACTTAATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166240.8 ENSMUST00000218841.2 |
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| CDS CAA 90 bp | TCCTCTAAATCAATTTCTTCATACTCTTCTCCAGATTCCTCATCTTaGATAGCCTTTCGGGCGGTCGCCAGCTTCTTTCGTAAAATAAAG | + |
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Preference number: 6 (lower is better) Translates to: SSKSISSYSSPDSSS*IAFRAVASFFRKIK Trigger: CTTTATTTTACGAAAGAAGCTGGCGACCGCCCGAAAGGCTATCAAAGATGAGGAATCTGGAGAAGAGTATGAAGAAATTGATTTAGAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS CCA 72 bp | ATAAATACCTGCTTTAAAGATTTCCAAGGGCCATACTaGAGAATGGCTGATGGATCTAAAGGAGGCATTGTA | + |
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Preference number: 6 (lower is better) Translates to: INTCFKDFQGPY*RMADGSKGGIV Trigger: TACAATGCCTCCTTTAGATCCATCAGCCATTCTCCAGTATGGCCCTTGGAAATCTTTAAAGCAGGTATTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020043.12 |
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| CDS CCA 72 bp | GGCTATATTTTCGGTAAGTTACTGATGCTCTATAAGTaGCTTGAATTTTTACAGCTGCATCATACCGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: GYIFGKLLMLYK*LEFLQLHHTAV Trigger: AACTGCGGTATGATGCAGCTGTAAAAATTCAAGCCACTTATAGAGCATCAGTAACTTACCGAAAATATAGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020043.12 ENSMUST00000123364.2 ENSMUST00000166240.8 |
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| CDS TCA 72 bp | TTGTTCTCTCCTCCTCCATTTTTAAGTGCAAGTTTCTaGTATGTTCCTCATGCTGTCTGTATTTTTCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: LFSPPPFLSASF*YVPHAVCIFLS Trigger: GGAAAGAAAAATACAGACAGCATGAGGAACATATCAGAAACTTGCACTTAAAAATGGAGGAGGAGAGAACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000020043.12 ENSMUST00000123364.2 ENSMUST00000166240.8 |
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| CDS CCA 72 bp | TCTCCAAAGAGACAAGATGAAAAAGTGGCACAATTGTaGCTAAGCTGTTTTGTGAAATGCTTAGATACTGTA | + |
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Preference number: 6 (lower is better) Translates to: SPKRQDEKVAQL*LSCFVKCLDTV Trigger: TACAGTATCTAAGCATTTCACAAAACAGCTTAGCCACAATTGTGCCACTTTTTCATCTTGTCTCTTTGGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166240.8 |
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| CDS TCA 72 bp | ACTCTTGTTCTTTATGACGTTGATATAATGAAGAACTaGCTCTGGCAATTCAAGCAAATCAGTGTCACTACT | + |
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Preference number: 6 (lower is better) Translates to: TLVLYDVDIMKN*LWQFKQISVTT Trigger: AGTAGTGACACTGATTTGCTTGAATTGCCAGAGTCAGTTCTTCATTATATCAACGTCATAAAGAACAAGAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020043.12 ENSMUST00000123364.2 ENSMUST00000166240.8 |
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