Pregenerated sensors for LRRC9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021090Ensembl transcript IDs: ENSMUST00000161284.3, ENSMUST00000162159.8, ENSMUST00000220791.2, ENSMUST00000221360.2
Found 213 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTTCCTAAATGCTTCAACCTCCCTATAGCCCACCAACCAAGGTTGTaGAGAAAGATGGTTAACAGGACAAGGGGGACAGGGACCTGTTTA | + |
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Preference number: 1 (lower is better) Translates to: VPKCFNLPIAHQPRL*RKMVNRTRGTGTCL Trigger: TAAACAGGTCCCTGTCCCCCTTGTCCTGTTAACCATCTTTCTCCACAACCTTGGTTGGTGGGCTATAGGGAGGTTGAAGCATTTAGGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| 3UTR CCA 90 bp | ACTGTCTGTTGGGTTCTACTTACACTCTTTCCCAACATCATGCATTaGCTCAAGTGTCTGCCTCAGCAAAACATCCCAGAACACAACCGA | + |
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Preference number: 1 (lower is better) Translates to: TVCWVLLTLFPNIMH*LKCLPQQNIPEHNR Trigger: TCGGTTGTGTTCTGGGATGTTTTGCTGAGGCAGACACTTGAGCCAATGCATGATGTTGGGAAAGAGTGTAAGTAGAACCCAACAGACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| 3UTR TCA 90 bp | CAGGACAAGGGGGACAGGGACCTGTTTAGAAGTAGTTCTTTGTGTTaGTTCCAAGTTTCCTTGTCAGGATATCAGCAGTCCAGTCCAAAA | + |
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Preference number: 1 (lower is better) Translates to: QDKGDRDLFRSSSLC*FQVSLSGYQQSSPK Trigger: TTTTGGACTGGACTGCTGATATCCTGACAAGGAAACTTGGAATCAACACAAAGAACTACTTCTAAACAGGTCCCTGTCCCCCTTGTCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| 3UTR GCA 90 bp | TTCTACTTACACTCTTTCCCAACATCATGCATTGGCTCAAGTGTCTaGCTCAGCAAAACATCCCAGAACACAACCGAGTCTCCAAAGAAC | + |
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Preference number: 1 (lower is better) Translates to: FYLHSFPTSCIGSSV*LSKTSQNTTESPKN Trigger: GTTCTTTGGAGACTCGGTTGTGTTCTGGGATGTTTTGCTGAGGCAGACACTTGAGCCAATGCATGATGTTGGGAAAGAGTGTAAGTAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| 3UTR GCA 90 bp | CATTCACTGTCTGTTGGGTTCTACTTACACTCTTTCCCAACATCATaGATTGGCTCAAGTGTCTGCCTCAGCAAAACATCCCAGAACACA | + |
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Preference number: 1 (lower is better) Translates to: HSLSVGFYLHSFPTS*IGSSVCLSKTSQNT Trigger: TGTGTTCTGGGATGTTTTGCTGAGGCAGACACTTGAGCCAATGCATGATGTTGGGAAAGAGTGTAAGTAGAACCCAACAGACAGTGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| 3UTR GCA 90 bp | TATGAAGTCACAGCAAGTGAAGATCAGCAAAGACCAGAGAAGCGTTaGAAGGCGAACCAATGCAAGAGAATCATTCACTGTCTGTTGGGT | + |
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Preference number: 1 (lower is better) Translates to: YEVTASEDQQRPEKR*KANQCKRIIHCLLG Trigger: ACCCAACAGACAGTGAATGATTCTCTTGCATTGGTTCGCCTTGCAACGCTTCTCTGGTCTTTGCTGATCTTCACTTGCTGTGACTTCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| 3UTR GCA 90 bp | AGTGAAGATCAGCAAAGACCAGAGAAGCGTTGCAAGGCGAACCAATaGAAGAGAATCATTCACTGTCTGTTGGGTTCTACTTACACTCTT | + |
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Preference number: 1 (lower is better) Translates to: SEDQQRPEKRCKANQ*KRIIHCLLGSTYTL Trigger: AAGAGTGTAAGTAGAACCCAACAGACAGTGAATGATTCTCTTGCATTGGTTCGCCTTGCAACGCTTCTCTGGTCTTTGCTGATCTTCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| 3UTR TCA 90 bp | AAGAACATTTGTTATTTTAATGGGAGAGGCTTTAACGTGGCAGAATaGCCCACCATCCGTAGAGTTGGTAACAGGAACGAACGAACTTTT | + |
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Preference number: 1 (lower is better) Translates to: KNICYFNGRGFNVAE*PTIRRVGNRNERTF Trigger: AAAAGTTCGTTCGTTCCTGTTACCAACTCTACGGATGGTGGGTCATTCTGCCACGTTAAAGCCTCTCCCATTAAAATAACAAATGTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| 3UTR-3UTR CCA 90 bp | CACCAACCAAGGTTGTGGAGAAAGATGGTTAACAGGACAAGGGGGACAGGGACCGGCAGCTCAGTCCAATaGGCAAACACCATGCACAAA | + |
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Preference number: 2 (lower is better) Translates to: HQPRLWRKMVNRTRGTGTGSSVQ*ANTMHK Trigger: TTTGTGCATGGTGTTTGCCCATTGGACTGAGCTGCC...GGTCCCTGTCCCCCTTGTCCTGTTAACCATCTTTCTCCACAACCTTGGTTGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| 3UTR CAA 90 bp | AGGGTTCCTAAATGCTTCAACCTCCCTATAGCCCACCAACCAAGGTaGTGGAGAAAGATGGTTAACAGGACAAGGGGGACAGGGACCTGT | + |
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Preference number: 2 (lower is better) Translates to: RVPKCFNLPIAHQPR*WRKMVNRTRGTGTC Trigger: ACAGGTCCCTGTCCCCCTTGTCCTGTTAACCATCTTTCTCCACAACCTTGGTTGGTGGGCTATAGGGAGGTTGAAGCATTTAGGAACCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTTCAACCTCCCTATAGCCCACCAACCAAGGTTGTGGAGAAAGATGGTTAACAAAAAGCAGGCAGAATaGCACAGGCATTTCTCTCTA | + |
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Preference number: 2 (lower is better) Translates to: CFNLPIAHQPRLWRKMVNKKQAE*HRHFSL Trigger: TAGAGAGAAATGCCTGTGGCATTCTGCCTGCTTTTT...GTTAACCATCTTTCTCCACAACCTTGGTTGGTGGGCTATAGGGAGGTTGAAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTCAACTTCAGGAGTTAAGGTGGGAGAGGCTTTAACGTaGCAGAATGACCCACCATCC | + |
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Preference number: 2 (lower is better) Translates to: SESLYSWLFLSSTSGVKVGEALT*QNDPPS Trigger: GGATGGTGGGTCATTCTGCCACGTTAAAGCCTCTCC...CACCTTAACTCCTGAAGTTGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| 3UTR CAA 90 bp | TCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTaGTCTTCAACTTCAGGAGTTAAGGTGAAGTCAGGTCCCAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: SSEDCCSESLYSWLF*SSTSGVKVKSGPKK Trigger: TTTCTTGGGACCTGACTTCACCTTAACTCCTGAAGTTGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTTATTTCTGTATGGCTCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGTAGTTCAGAGAAATaGAACTCAGCTTTTGCCCTA | + |
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Preference number: 2 (lower is better) Translates to: KLFLYGSSEDCCSESLYSCSSEK*NSAFAL Trigger: TAGGGCAAAAGCTGAGTTTCATTTCTCTGAACTACA...AGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGAGCCATACAGAAATAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| 3UTR-3UTR GCA 90 bp | TGTTTAGAAGTAGTTCTTTGTGTTGATTCCAAGTTTCCTTGTCAGGATATCAGCTGCAAGGCGAACCAATaGAAGAGAATCATTCACTGT | + |
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Preference number: 2 (lower is better) Translates to: CLEVVLCVDSKFPCQDISCKANQ*KRIIHC Trigger: ACAGTGAATGATTCTCTTGCATTGGTTCGCCTTGCA...GCTGATATCCTGACAAGGAAACTTGGAATCAACACAAAGAACTACTTCTAAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| 3UTR GCA 72 bp | CACTCTTTCCCAACATCATGCATTGGCTCAAGTGTCTaGCTCAGCAAAACATCCCAGAACACAACCGAGTCT | + |
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Preference number: 3 (lower is better) Translates to: HSFPTSCIGSSV*LSKTSQNTTES Trigger: AGACTCGGTTGTGTTCTGGGATGTTTTGCTGAGGCAGACACTTGAGCCAATGCATGATGTTGGGAAAGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| 3UTR GCA 72 bp | CAGCAAAGACCAGAGAAGCGTTGCAAGGCGAACCAATaGAAGAGAATCATTCACTGTCTGTTGGGTTCTACT | + |
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Preference number: 3 (lower is better) Translates to: QQRPEKRCKANQ*KRIIHCLLGST Trigger: AGTAGAACCCAACAGACAGTGAATGATTCTCTTGCATTGGTTCGCCTTGCAACGCTTCTCTGGTCTTTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| 3UTR TCA 72 bp | GGGGACAGGGACCTGTTTAGAAGTAGTTCTTTGTGTTaGTTCCAAGTTTCCTTGTCAGGATATCAGCAGTCC | + |
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Preference number: 3 (lower is better) Translates to: GDRDLFRSSSLC*FQVSLSGYQQS Trigger: GGACTGCTGATATCCTGACAAGGAAACTTGGAATCAACACAAAGAACTACTTCTAAACAGGTCCCTGTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| 3UTR GCA 72 bp | ACAGCAAGTGAAGATCAGCAAAGACCAGAGAAGCGTTaGAAGGCGAACCAATGCAAGAGAATCATTCACTGT | + |
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Preference number: 3 (lower is better) Translates to: TASEDQQRPEKR*KANQCKRIIHC Trigger: ACAGTGAATGATTCTCTTGCATTGGTTCGCCTTGCAACGCTTCTCTGGTCTTTGCTGATCTTCACTTGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| 3UTR TCA 72 bp | TGTTATTTTAATGGGAGAGGCTTTAACGTGGCAGAATaGCCCACCATCCGTAGAGTTGGTAACAGGAACGAA | + |
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Preference number: 3 (lower is better) Translates to: CYFNGRGFNVAE*PTIRRVGNRNE Trigger: TTCGTTCCTGTTACCAACTCTACGGATGGTGGGTCATTCTGCCACGTTAAAGCCTCTCCCATTAAAATAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| 3UTR CCA 72 bp | AGGCGAACCAATGCAAGAGAATCATTCACTGTCTGTTaGGTTCTACTTACACTCTTTCCCAACATCATGCAT | + |
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Preference number: 3 (lower is better) Translates to: RRTNARESFTVC*VLLTLFPNIMH Trigger: ATGCATGATGTTGGGAAAGAGTGTAAGTAGAACCCAACAGACAGTGAATGATTCTCTTGCATTGGTTCGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCTCTCTATGAAGTCACAGCAAGTGAAGATCAGCAAAGACCAGAGAAGCGTTATCATTCACTGTCTGTaGGGTTCTACTTACACTCTT | + |
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Preference number: 3 (lower is better) Translates to: FLSMKSQQVKISKDQRSVIIHCL*GSTYTL Trigger: AAGAGTGTAAGTAGAACCCAACAGACAGTGAATGAT...AACGCTTCTCTGGTCTTTGCTGATCTTCACTTGCTGTGACTTCATAGAGAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| CDS-3UTR TCA 90 bp | ACCGAGTCTCCAAAGAACCCAGAAATTTCCAGTTCAGACGGCTACGATCATGATCTGTCCGTAGCCACTTaGGGGCACTTTCTGGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: TESPKNPEISSSDGYDHDLSVAT*GHFLVE Trigger: CTCTACCAGAAAGTGCCCTCAAGTGGCTACGGACAG...ATCATGATCGTAGCCGTCTGAACTGGAAATTTCTGGGTTCTTTGGAGACTCGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| CDS-3UTR TCA 90 bp | GTGAAGTCAGGTCCCAAGAAACGGCTAAATCCAGCAGGCAGAAGAACATTTGTTGATAGTTGGCTTTATTaGTGGGCTCCTGGTCACGAG | + |
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Preference number: 4 (lower is better) Translates to: VKSGPKKRLNPAGRRTFVDSWLY*WAPGHE Trigger: CTCGTGACCAGGAGCCCATCAATAAAGCCAACTATC...AACAAATGTTCTTCTGCCTGCTGGATTTAGCCGTTTCTTGGGACCTGACTTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR TCA 90 bp | TATGGCTCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGCTGTCCGTAGCCACTTaGGGGCACTTTCTGGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: YGSSEDCCSESLYSWLFLLSVAT*GHFLVE Trigger: CTCTACCAGAAAGTGCCCTCAAGTGGCTACGGACAG...CAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGAGCCATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR GCA 90 bp | GTGAAGTCAGGTCCCAAGAAACGGCTAAATCCAGCAGGCAGAAGAACATTTGTTGGCGTTGTATCGCTCTaGCCTTTGCTAGAGATCTTG | + |
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Preference number: 4 (lower is better) Translates to: VKSGPKKRLNPAGRRTFVGVVSL*PLLEIL Trigger: CAAGATCTCTAGCAAAGGGCAGAGCGATACAACGCC...AACAAATGTTCTTCTGCCTGCTGGATTTAGCCGTTTCTTGGGACCTGACTTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR GCA 90 bp | CGGCAGCTAGATCCTAATCCACACAGGTCTGCAGAAAGTGGCAAAAAGCAGGCAAGTTTGACCAAAGACTaGAGTTTGCTTAGTTCTCGC | + |
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Preference number: 4 (lower is better) Translates to: RQLDPNPHRSAESGKKQASLTKD*SLLSSR Trigger: GCGAGAACTAAGCAAACTGCAGTCTTTGGTCAAACT...TGCCTGCTTTTTGCCACTTTCTGCAGACCTGTGTGGATTAGGATCTAGCTGCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| CDS-3UTR CCA 90 bp | TCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTCACACTCAGCCTCAATGTaGCTGGCTTCTGCCAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: SSEDCCSESLYSWLFLSSHSASM*LASARG Trigger: ACCCCTGGCAGAAGCCAGCCACATTGAGGCTGAGTG...TGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR CCA 90 bp | GGCATTTCTCTCTATGAAGTCACAGCAAGTGAAGATCAGCAAAGACCAGAGAAGCATCAGCAGGGAACTTaGCTTGGAAAACGCGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: GISLYEVTASEDQQRPEKHQQGT*LGKRGV Trigger: GACACCGCGTTTTCCAAGCCAAGTTCCCTGCTGATG...CTTCTCTGGTCTTTGCTGATCTTCACTTGCTGTGACTTCATAGAGAGAAATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| CDS-3UTR TCA 90 bp | ACATTTGTTATTTTAATGGGAGAGGCTTTAACGTGGCAGAATGACCCACCATCCACGCGCTCAGAGATGTaGTCCTGTTGTTCTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: TFVILMGEALTWQNDPPSTRSEM*SCCSPE Trigger: CTCTGGAGAACAACAGGATCACATCTCTGAGCGCGT...GGATGGTGGGTCATTCTGCCACGTTAAAGCCTCTCCCATTAAAATAACAAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR TCA 90 bp | ACCAACCAAGGTTGTGGAGAAAGATGGTTAACAGGACAAGGGGGACAGGGACCTTGTAGTTCAGAGAAATaGAACTCAGCTTTTGCCCTA | + |
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Preference number: 4 (lower is better) Translates to: TNQGCGERWLTGQGGQGPCSSEK*NSAFAL Trigger: TAGGGCAAAAGCTGAGTTTCATTTCTCTGAACTACA...AGGTCCCTGTCCCCCTTGTCCTGTTAACCATCTTTCTCCACAACCTTGGTTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| CDS-3UTR GCA 90 bp | GTGAAGTCAGGTCCCAAGAAACGGCTAAATCCAGCAGGCAGAAGAACATTTGTTTCCTCCTTGTATTTCTaGTGGAGGAACTCTATCCGG | + |
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Preference number: 4 (lower is better) Translates to: VKSGPKKRLNPAGRRTFVSSLYF*WRNSIR Trigger: CCGGATAGAGTTCCTCCAGCAGAAATACAAGGAGGA...AACAAATGTTCTTCTGCCTGCTGGATTTAGCCGTTTCTTGGGACCTGACTTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR TCA 90 bp | CCAGAGAAGCGTTGCAAGGCGAACCAATGCAAGAGAATCATTCACTGTCTGTTGCAATGTGATTGTAGTTaGGGCATAAGACCTTCACGT | + |
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Preference number: 4 (lower is better) Translates to: PEKRCKANQCKRIIHCLLQCDCS*GIRPSR Trigger: ACGTGAAGGTCTTATGCCTCAACTACAATCACATTG...CAACAGACAGTGAATGATTCTCTTGCATTGGTTCGCCTTGCAACGCTTCTCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| CDS-3UTR TCA 90 bp | GGCTCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGTCTCTGCTTAAGTGGGTCTaGGGCTTTAGTCTAGGCATA | + |
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Preference number: 4 (lower is better) Translates to: GSSEDCCSESLYSWLFLSLLKWV*GFSLGI Trigger: TATGCCTAGACTAAAGCCTCAGACCCACTTAAGCAG...AGACAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR TCA 90 bp | TCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTCAGCCCTTCCACCTGACTaGTCTCATTTCCCTGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: SSEDCCSESLYSWLFLSSALPPD*SHFPGE Trigger: TTCTCCAGGGAAATGAGATCAGTCAGGTGGAAGGGC...TGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR CCA 90 bp | GTGAAGTCAGGTCCCAAGAAACGGCTAAATCCAGCAGGCAGAAGAACATTTGTTGGCAAAACGAGGTCATaGTCGAAGACAAACCATTTG | + |
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Preference number: 4 (lower is better) Translates to: VKSGPKKRLNPAGRRTFVGKTRS*SKTNHL Trigger: CAAATGGTTTGTCTTCGACCATGACCTCGTTTTGCC...AACAAATGTTCTTCTGCCTGCTGGATTTAGCCGTTTCTTGGGACCTGACTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR CCA 90 bp | ATAGCCCACCAACCAAGGTTGTGGAGAAAGATGGTTAACAGGACAAGGGGGACACTGATCTCATTTCCCTaGAGAAAGAGGAACTTTAAG | + |
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Preference number: 4 (lower is better) Translates to: IAHQPRLWRKMVNRTRGTLISFP*RKRNFK Trigger: CTTAAAGTTCCTCTTTCTCCAGGGAAATGAGATCAG...TGTCCCCCTTGTCCTGTTAACCATCTTTCTCCACAACCTTGGTTGGTGGGCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| CDS-3UTR CCA 90 bp | AAGTTATTTCTGTATGGCTCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTCATCAGCAGGGAACTTaGCTTGGAAAACGCGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: KLFLYGSSEDCCSESLYSHQQGT*LGKRGV Trigger: GACACCGCGTTTTCCAAGCCAAGTTCCCTGCTGATG...AGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGAGCCATACAGAAATAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| 3UTR CAA 72 bp | TTGGGTTCTACTTACACTCTTTCCCAACATCATGCATaGGCTCAAGTGTCTGCCTCAGCAAAACATCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LGSTYTLSQHHA*AQVSASAKHPR Trigger: TCTGGGATGTTTTGCTGAGGCAGACACTTGAGCCAATGCATGATGTTGGGAAAGAGTGTAAGTAGAACCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| CDS-3UTR TCA 90 bp | TATGGCTCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGGTTTGCACAGCACATTaGTCTCTTCCCCAGTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: YGSSEDCCSESLYSWLFLVCTAH*SLPQSS Trigger: AGAAGACTGGGGAAGAGATCAATGTGCTGTGCAAAC...CAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGAGCCATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR TCA 90 bp | GGCTCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTATTCGGGGATACCCTaGGAAAAACATCTCCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: GSSEDCCSESLYSWLFLSYSGIP*EKHLQF Trigger: AAACTGGAGATGTTTTTCTCAGGGTATCCCCGAATA...AGACAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR TCA 90 bp | CCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTCAAATCGACCAATGCTGCTaGCTAAGTTTCCTGCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: PLRIAVQNPSILGYFCLQIDQCC*LSFLQG Trigger: ACCTTGCAGGAAACTTAGTCAGCAGCATTGGTCGAT...TTGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR TCA 90 bp | AAGTTATTTCTGTATGGCTCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTAATCCGCCAGCTCCTTaGTTTGCTTTGCTGATACGT | + |
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Preference number: 4 (lower is better) Translates to: KLFLYGSSEDCCSESLYSNPPAP*FALLIR Trigger: ACGTATCAGCAAAGCAAATCAAGGAGCTGGCGGATT...AGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGAGCCATACAGAAATAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR TCA 90 bp | TGTTTAGAAGTAGTTCTTTGTGTTGATTCCAAGTTTCCTTGTCAGGATATCAGCGCCCTTCCACCTGACTaGTCTCATTTCCCTGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: CLEVVLCVDSKFPCQDISALPPD*SHFPGE Trigger: TTCTCCAGGGAAATGAGATCAGTCAGGTGGAAGGGC...GCTGATATCCTGACAAGGAAACTTGGAATCAACACAAAGAACTACTTCTAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| CDS-3UTR TCA 90 bp | GTTCTTTGTGTTGATTCCAAGTTTCCTTGTCAGGATATCAGCAGTCCAGTCCAAAGAGTTTCTCCAGTTTaGCCAAAGACTGCAGTTTGC | + |
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Preference number: 4 (lower is better) Translates to: VLCVDSKFPCQDISSPVQRVSPV*PKTAVC Trigger: GCAAACTGCAGTCTTTGGTCAAACTGGAGAAACTCT...TTGGACTGGACTGCTGATATCCTGACAAGGAAACTTGGAATCAACACAAAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| CDS-3UTR GCA 90 bp | CAAAGACCAGAGAAGCGTTGCAAGGCGAACCAATGCAAGAGAATCATTCACTGTCCATTGTATCCCAAATaGAGAACCTCTAAACTTTGC | + |
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Preference number: 4 (lower is better) Translates to: QRPEKRCKANQCKRIIHCPLYPK*RTSKLC Trigger: GCAAAGTTTAGAGGTTCTGCATTTGGGATACAATGG...ACAGTGAATGATTCTCTTGCATTGGTTCGCCTTGCAACGCTTCTCTGGTCTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| CDS-3UTR GCA 90 bp | GTGAAGTCAGGTCCCAAGAAACGGCTAAATCCAGCAGGCAGAAGAACATTTGTTCCATTGTATCCCAAATaGAGAACCTCTAAACTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VKSGPKKRLNPAGRRTFVPLYPK*RTSKLC Trigger: GCAAAGTTTAGAGGTTCTGCATTTGGGATACAATGG...AACAAATGTTCTTCTGCCTGCTGGATTTAGCCGTTTCTTGGGACCTGACTTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR CCA 90 bp | TCATCAGAATTTATAGGAATTCCATCCAACATCTGTAAATTAGGCAGGCGGAATCCAGAGCGCTCAGCTTaGTCAGTATCTTCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSEFIGIPSNICKLGRRNPERSA*SVSSAA Trigger: TGCAGCAGAAGATACTGACCAAGCTGAGCGCTCTGG...ATTCCGCCTGCCTAATTTACAGATGTTGGATGGAATTCCTATAAATTCTGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR CCA 90 bp | TCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTCACCAGTCTTCTTCAGCTaGTTCCAGCTCAAGTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSEDCCSESLYSWLFLSSPVFFS*FQLKSK Trigger: TTTGGACTTGAGCTGGAACCAGCTGAAGAAGACTGG...TGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| 3UTR CAA 72 bp | AAGGCGAACCAATGCAAGAGAATCATTCACTGTCTGTaGGGTTCTACTTACACTCTTTCCCAACATCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: KANQCKRIIHCL*GSTYTLSQHHA Trigger: TGCATGATGTTGGGAAAGAGTGTAAGTAGAACCCAACAGACAGTGAATGATTCTCTTGCATTGGTTCGCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| CDS-3UTR TCA 90 bp | CCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTCAAACTTTGTCAGCCTGGTaGTGCCTTCTATCTTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLRIAVQNPSILGYFCLQTLSAW*CLLSLR Trigger: TCTCAAAGATAGAAGGCATCACCAGGCTGACAAAGT...TTGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTCACTGTTTTCCTCTAGATaGAGCATCAGCAGGGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SSEDCCSESLYSWLFLSSLFSSR*SISREL Trigger: AAGTTCCCTGCTGATGCTTCATCTAGAGGAAAACAG...TGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS-3UTR GCA 90 bp | GCCTCAGCAAAACATCCCAGAACACAACCGAGTCTCCAAAGAACCCAGAAATTTAGAACCTCTAAACTTTaGATTATTGGAGGCAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ASAKHPRTQPSLQRTQKFRTSKL*IIGGKF Trigger: GAACTTGCCTCCAATAATGCAAAGTTTAGAGGTTCT...AAATTTCTGGGTTCTTTGGAGACTCGGTTGTGTTCTGGGATGTTTTGCTGAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
||
| CDS-3UTR CCA 90 bp | AAGTTATTTCTGTATGGCTCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTCACATGGTTATGGCTaGCGTCCAAATACTCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KLFLYGSSEDCCSESLYSSHGYG*RPNTQG Trigger: ACCTTGAGTATTTGGACGCCAGCCATAACCATGTGA...AGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGAGCCATACAGAAATAACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS-3UTR CCA 90 bp | TCATCAGAATTTATAGGAATTCCATCCAACATCTGTAAATTAGGCAGGCGGAATCCCAGCTTGGAAATCTaGGTCAGGATTTTGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSEFIGIPSNICKLGRRNPSLEI*VRILAE Trigger: CTCTGCCAAAATCCTGACCCAGATTTCCAAGCTGGG...ATTCCGCCTGCCTAATTTACAGATGTTGGATGGAATTCCTATAAATTCTGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS-3UTR TCA 90 bp | CTCTATTCTTGGCTATTTTTGTCTTCAACTTCAGGAGTTAAGGTGAAGTCAGGTCTTAGCACATGTCTCTaGGGAACAAACACCGAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LYSWLFLSSTSGVKVKSGLSTCL*GTNTEL Trigger: TAACTCGGTGTTTGTTCCTCAGAGACATGTGCTAAG...ACCTGACTTCACCTTAACTCCTGAAGTTGAAGACAAAAATAGCCAAGAATAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS-3UTR TCA 90 bp | TGTTTAGAAGTAGTTCTTTGTGTTGATTCCAAGTTTCCTTGTCAGGATATCAGCCTGCTTAAGTGGGTCTaGGGCTTTAGTCTAGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: CLEVVLCVDSKFPCQDISLLKWV*GFSLGI Trigger: TATGCCTAGACTAAAGCCTCAGACCCACTTAAGCAG...GCTGATATCCTGACAAGGAAACTTGGAATCAACACAAAGAACTACTTCTAAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
||
| CDS-3UTR TCA 90 bp | TCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTCAACTTCAGGAGTTAAGGTGAGAGTTTCTCCAGTTTaGCCAAAGACTGCAGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SESLYSWLFLSSTSGVKVRVSPV*PKTAVC Trigger: GCAAACTGCAGTCTTTGGTCAAACTGGAGAAACTCT...CACCTTAACTCCTGAAGTTGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTCATTGGTCAGTATCTTCTaGTGCAGAACTGATTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSEDCCSESLYSWLFLSSLVSIF*CRTDSC Trigger: ACAGGAATCAGTTCTGCAGCAGAAGATACTGACCAA...TGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR GCA 90 bp | TCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTCAAGTTTGACCAAAGACTaGAGTTTGCTTAGTTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SSEDCCSESLYSWLFLSSSLTKD*SLLSSR Trigger: GCGAGAACTAAGCAAACTGCAGTCTTTGGTCAAACT...TGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS-3UTR CCA 90 bp | ACATTTGTTATTTTAATGGGAGAGGCTTTAACGTGGCAGAATGACCCACCATCCTTTCCAGTTGTTCATTaGGATCAAGACATCGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: TFVILMGEALTWQNDPPSFPVVH*DQDIDQ Trigger: TTGGTCGATGTCTTGATCCCAATGAACAACTGGAAA...GGATGGTGGGTCATTCTGCCACGTTAAAGCCTCTCCCATTAAAATAACAAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS-3UTR CCA 90 bp | TCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTCAACTTCAGGAGTTAAGGTGTCTAGGGTTATCACATaGTTATGGCTGGCGTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SESLYSWLFLSSTSGVKVSRVIT*LWLASK Trigger: TTTGGACGCCAGCCATAACCATGTGATAACCCTAGA...CACCTTAACTCCTGAAGTTGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR CCA 90 bp | TTTTTGCTTGTAGTTCAGAGAAATGAAACTCAGCTTTTGCCCTATCATCAGAATAGTGGGGTCCCAGCTTaGAAATCTGGGTCAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: FLLVVQRNETQLLPYHQNSGVPA*KSGSGF Trigger: AAATCCTGACCCAGATTTCCAAGCTGGGACCCCACT...ATTCTGATGATAGGGCAAAAGCTGAGTTTCATTTCTCTGAACTACAAGCAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR CCA 90 bp | AGAAGCGTTGCAAGGCGAACCAATGCAAGAGAATCATTCACTGTCTGTTGGGTTCATTTTCCTACAAATTaGATTGCCATAGACAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: RSVARRTNARESFTVCWVHFPTN*IAIDSK Trigger: CTTACTGTCTATGGCAATCCAATTTGTAGGAAAATG...AACCCAACAGACAGTGAATGATTCTCTTGCATTGGTTCGCCTTGCAACGCTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTCACATACATGTCTAGAATaGCCAAGTTGCATAAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSEDCCSESLYSWLFLSSHTCLE*PSCINP Trigger: AGGGTTTATGCAACTTGGTCATTCTAGACATGTATG...TGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR TCA 90 bp | GAATTTATAGGAATTCCATCCAACATCTGTAAATTAGGCAGGCGGAATATGAGCCAATGTGATTGTAGTTaGGGCATAAGACCTTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: EFIGIPSNICKLGRRNMSQCDCS*GIRPSR Trigger: ACGTGAAGGTCTTATGCCTCAACTACAATCACATTG...GCTCATATTCCGCCTGCCTAATTTACAGATGTTGGATGGAATTCCTATAAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR TCA 90 bp | TGTTTAGAAGTAGTTCTTTGTGTTGATTCCAAGTTTCCTTGTCAGGATATCAGCCTGTTTTCCTCTAGATaGAGCATCAGCAGGGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: CLEVVLCVDSKFPCQDISLFSSR*SISREL Trigger: AAGTTCCCTGCTGATGCTTCATCTAGAGGAAAACAG...GCTGATATCCTGACAAGGAAACTTGGAATCAACACAAAGAACTACTTCTAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
||
| CDS-3UTR GCA 90 bp | ACATTTGTTATTTTAATGGGAGAGGCTTTAACGTGGCAGAATGACCCACCATCCATCGCTTCAATCTCATaGAGTTTCTTGTTCCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TFVILMGEALTWQNDPPSIASIS*SFLFQN Trigger: ATTCTGGAACAAGAAACTGCATGAGATTGAAGCGAT...GGATGGTGGGTCATTCTGCCACGTTAAAGCCTCTCCCATTAAAATAACAAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR GCA 90 bp | TCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTCAAGTCATCAGCCTGAGTaGCTTCTTCAAAATGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: SSEDCCSESLYSWLFLSSSHQPE*LLQNGY Trigger: ATATCCATTTTGAAGAAGGCACTCAGGCTGATGACT...TGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR GCA 90 bp | GGCTCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGTCTATTATTGCTGAACGATaGCCATTTCAAATTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GSSEDCCSESLYSWLFLSIIAER*PFQILQ Trigger: TTGGAGAATTTGAAATGGGCATCGTTCAGCAATAAT...AGACAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGAGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS-3UTR CCA 90 bp | TCATCAGAATTTATAGGAATTCCATCCAACATCTGTAAATTAGGCAGGCGGAATGTGCCTTCTTCAAAATaGATATTGCCCACAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSEFIGIPSNICKLGRRNVPSSK*ILPTVS Trigger: GGAGACTGTGGGCAATATCCATTTTGAAGAAGGCAC...ATTCCGCCTGCCTAATTTACAGATGTTGGATGGAATTCCTATAAATTCTGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR CCA 90 bp | GAATTTATAGGAATTCCATCCAACATCTGTAAATTAGGCAGGCGGAATATGAGCGTTATCACATGGTTATaGCTGGCGTCCAAATACTCA | + |
|
Preference number: 4 (lower is better) Translates to: EFIGIPSNICKLGRRNMSVITWL*LASKYS Trigger: TGAGTATTTGGACGCCAGCCATAACCATGTGATAAC...GCTCATATTCCGCCTGCCTAATTTACAGATGTTGGATGGAATTCCTATAAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| 3UTR CAA 72 bp | GATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTaGTCTTCAACTTCAGGAGTTAAGGTGAAGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DCCSESLYSWLF*SSTSGVKVKSG Trigger: ACCTGACTTCACCTTAACTCCTGAAGTTGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR TCA 90 bp | TCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTCAACTTCAGGAGTTAAGGTGAGTTTCCTGCAAGGTTaGGGTCTTTTAGATTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SESLYSWLFLSSTSGVKVSFLQG*GLLDSS Trigger: TGAAGAATCTAAAAGACCTCAACCTTGCAGGAAACT...CACCTTAACTCCTGAAGTTGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR TCA 90 bp | TCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTCATCATTCAGATGTCTCTaGACAGTTTTTATTCGCATG | + |
|
Preference number: 4 (lower is better) Translates to: SSEDCCSESLYSWLFLSSSFRCL*TVFIRM Trigger: CATGCGAATAAAAACTGTTCAGAGACATCTGAATGA...TGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR TCA 90 bp | TCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTCATTCAGTTCTGGAAGATaGAATATTACAAAGAACCGG | + |
|
Preference number: 4 (lower is better) Translates to: SSEDCCSESLYSWLFLSSFSSGR*NITKNR Trigger: CCGGTTCTTTGTAATATTTCATCTTCCAGAACTGAA...TGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR GCA 90 bp | TTTTTGCTTGTAGTTCAGAGAAATGAAACTCAGCTTTTGCCCTATCATCAGAATGTCAGTATCTTCTGCTaGAGAACTGATTCCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLLVVQRNETQLLPYHQNVSIFC*RTDSCV Trigger: CACACAGGAATCAGTTCTGCAGCAGAAGATACTGAC...ATTCTGATGATAGGGCAAAAGCTGAGTTTCATTTCTCTGAACTACAAGCAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR GCA 90 bp | TTTTTGCTTGTAGTTCAGAGAAATGAAACTCAGCTTTTGCCCTATCATCAGAATCTTCAAAATGGATATTaGCCACAGTCTCCAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLLVVQRNETQLLPYHQNLQNGY*PQSPAQ Trigger: CTGAGCTGGAGACTGTGGGCAATATCCATTTTGAAG...ATTCTGATGATAGGGCAAAAGCTGAGTTTCATTTCTCTGAACTACAAGCAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR CCA 90 bp | TTTCTCTCTATGAAGTCACAGCAAGTGAAGATCAGCAAAGACCAGAGAAGCGTTCTGTTAAGTTGTAGCTaGACTAAGTTACAAATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FLSMKSQQVKISKDQRSVLLSCS*TKLQIP Trigger: TGGAATTTGTAACTTAGTCCAGCTACAACTTAACAG...AACGCTTCTCTGGTCTTTGCTGATCTTCACTTGCTGTGACTTCATAGAGAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| CDS-3UTR CCA 90 bp | GAATTTATAGGAATTCCATCCAACATCTGTAAATTAGGCAGGCGGAATATGAGCCTGATCTCATTTCCCTaGAGAAAGAGGAACTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: EFIGIPSNICKLGRRNMSLISFP*RKRNFK Trigger: CTTAAAGTTCCTCTTTCTCCAGGGAAATGAGATCAG...GCTCATATTCCGCCTGCCTAATTTACAGATGTTGGATGGAATTCCTATAAATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS-3UTR TCA 90 bp | TCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTCAACTTCAGGAGTTAAGGTGAGAGGTTATTATTGCTaGACGATGCCCATTTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SESLYSWLFLSSTSGVKVRGYYC*TMPISN Trigger: ATTTGAAATGGGCATCGTTCAGCAATAATAACCTCT...CACCTTAACTCCTGAAGTTGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS-3UTR GCA 90 bp | CTCTATTCTTGGCTATTTTTGTCTTCAACTTCAGGAGTTAAGGTGAAGTCAGGTAATGAATTTCAGAGCTaGTCTGGTTTCTTCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LYSWLFLSSTSGVKVKSGNEFQS*SGFFFR Trigger: TCTGAAGAAGAAACCAGAGCAGCTCTGAAATTCATT...ACCTGACTTCACCTTAACTCCTGAAGTTGAAGACAAAAATAGCCAAGAATAGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS-3UTR GCA 90 bp | TCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTCAACTTCAGGAGTTAAGGTGAGAACCTCTAAACTTTaGATTATTGGAGGCAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SESLYSWLFLSSTSGVKVRTSKL*IIGGKF Trigger: GAACTTGCCTCCAATAATGCAAAGTTTAGAGGTTCT...CACCTTAACTCCTGAAGTTGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS-3UTR CCA 90 bp | AAGTTATTTCTGTATGGCTCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTTTAGCTCTTGCATTTaGATAAAGTTTGAGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KLFLYGSSEDCCSESLYSFSSCI*IKFECP Trigger: AGGACACTCAAACTTTATCCAAATGCAAGAGCTAAA...AGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGAGCCATACAGAAATAACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS-3UTR GCA 90 bp | GAATTTATAGGAATTCCATCCAACATCTGTAAATTAGGCAGGCGGAATATGAGCCTTCAATTTTCTCTATaGAGCATTCAGCAATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EFIGIPSNICKLGRRNMSLQFSL*SIQQSK Trigger: TTTGGATTGCTGAATGCTGCATAGAGAAAATTGAAG...GCTCATATTCCGCCTGCCTAATTTACAGATGTTGGATGGAATTCCTATAAATTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS-3UTR CCA 90 bp | TCATCAGAATTTATAGGAATTCCATCCAACATCTGTAAATTAGGCAGGCGGAATTCAAGGTTGTACAAGTaGTACACATCATCTAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSEFIGIPSNICKLGRRNSRLYK*YTSSKQ Trigger: TTGCTTAGATGATGTGTACCACTTGTACAACCTTGA...ATTCCGCCTGCCTAATTTACAGATGTTGGATGGAATTCCTATAAATTCTGATGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS-3UTR CCA 90 bp | TCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTCAACTTCAGGAGTTAAGGTGCTGTTAAGTTGTAGCTaGACTAAGTTACAAATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SESLYSWLFLSSTSGVKVLLSCS*TKLQIP Trigger: TGGAATTTGTAACTTAGTCCAGCTACAACTTAACAG...CACCTTAACTCCTGAAGTTGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS CCA 90 bp | CTTGGCTTGGAAAACGCGGTGTCATTAAAGGCCCGGATGCGGTTATaGTCGACGACCAGCTCCTGGAGGACGATCAGGTTGTCCAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LGLENAVSLKARMRL*STTSSWRTIRLSSP Trigger: AGGGCTGGACAACCTGATCGTCCTCCAGGAGCTGGTCGTCGACCATAACCGCATCCGGGCCTTTAATGACACCGCGTTTTCCAAGCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162159.8 ENSMUST00000220791.2 ENSMUST00000221360.2 |
||
| CDS GCA 90 bp | ACCTCACTATTCCGGGGTTTCTCGGCCTCCGGCGTTGTATCGCTCTaGCCTTTGCTAGAGATCTTGAGTTCAGCCAGTTCCCGTTCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: TSLFRGFSASGVVSL*PLLEILSSASSRSN Trigger: GTTAGAACGGGAACTGGCTGAACTCAAGATCTCTAGCAAAGGGCAGAGCGATACAACGCCGGAGGCCGAGAAACCCCGGAATAGTGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
||
| CDS TCA 90 bp | GTCATCCAGAGCGCTCAGCTTGGTCAGTATCTTCTGCTGCAGAACTaGTTCCTGTGTGACAACCTCACTATTCCGGGGTTTCTCGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VIQSAQLGQYLLLQN*FLCDNLTIPGFLGL Trigger: GAGGCCGAGAAACCCCGGAATAGTGAGGTTGTCACACAGGAATCAGTTCTGCAGCAGAAGATACTGACCAAGCTGAGCGCTCTGGATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
||
| CDS TCA 90 bp | CCTGGTCACGAGCCTGAATACTCTGGCCAAGAAAAACCTTCGCAATaGGGATGGTGCCATGTCTGTAGAGTTCACTCTCTGAGGGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PGHEPEYSGQEKPSQ*GWCHVCRVHSLRGL Trigger: AAGGCCCCTCAGAGAGTGAACTCTACAGACATGGCACCATCCTCATTGCGAAGGTTTTTCTTGGCCAGAGTATTCAGGCTCGTGACCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
||
| CDS TCA 90 bp | CCAGCTCCTGGAGGACGATCAGGTTGTCCAGCCCTTCCACCTGACTaGTCTCATTTCCCTGGAGAAAGAGGAACTTTAAGTTTCTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PAPGGRSGCPALPPD*SHFPGERGTLSFSV Trigger: GACTGAGAAACTTAAAGTTCCTCTTTCTCCAGGGAAATGAGATCAGTCAGGTGGAAGGGCTGGACAACCTGATCGTCCTCCAGGAGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162159.8 ENSMUST00000220791.2 ENSMUST00000221360.2 |
||
| CDS TCA 90 bp | ACGACCAGCTCCTGGAGGACGATCAGGTTGTCCAGCCCTTCCACCTaGCTGATCTCATTTCCCTGGAGAAAGAGGAACTTTAAGTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TTSSWRTIRLSSPST*LISFPWRKRNFKFL Trigger: GAGAAACTTAAAGTTCCTCTTTCTCCAGGGAAATGAGATCAGTCAGGTGGAAGGGCTGGACAACCTGATCGTCCTCCAGGAGCTGGTCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162159.8 ENSMUST00000220791.2 ENSMUST00000221360.2 |
||
| CDS TCA 90 bp | AACCTTCGCAATGAGGATGGTGCCATGTCTGTAGAGTTCACTCTCTaGGGGGCCTTTCTTCTCCTCCTTGTATTTCTGCTGGAGGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: NLRNEDGAMSVEFTL*GAFLLLLVFLLEEL Trigger: GAGTTCCTCCAGCAGAAATACAAGGAGGAGAAGAAAGGCCCCTCAGAGAGTGAACTCTACAGACATGGCACCATCCTCATTGCGAAGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS GCA 90 bp | GTAACTCTGTCATCCAGAGCGCTCAGCTTGGTCAGTATCTTCTGCTaGAGAACTGATTCCTGTGTGACAACCTCACTATTCCGGGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VTLSSRALSLVSIFC*RTDSCVTTSLFRGF Trigger: GAAACCCCGGAATAGTGAGGTTGTCACACAGGAATCAGTTCTGCAGCAGAAGATACTGACCAAGCTGAGCGCTCTGGATGACAGAGTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS-3UTR CAA 90 bp | GGCTCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGTCTAGGCCCGTGAGAAGGTaGTTGTTCATGCTGAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GSSEDCCSESLYSWLFLSRPVRR*LFMLRR Trigger: CCGCCTCAGCATGAACAACAACCTTCTCACGGGCCT...AGACAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS TCA 90 bp | CGCGACAGGATTAGTTCACAGCAGGAGTTAAACCAGTCATCAGCCTaGGTGCCTTCTTCAAAATGGATATTGCCCACAGTCTCCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RDRISSQQELNQSSA*VPSSKWILPTVSSS Trigger: TGAGCTGGAGACTGTGGGCAATATCCATTTTGAAGAAGGCACTCAGGCTGATGACTGGTTTAACTCCTGCTGTGAACTAATCCTGTCGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS TCA 90 bp | GCTGGTTCCAGCTCAAGTCCAAATGCTTCAGTTTCATCAGGCCTCTaGATCCCTCTAGGGTTATCACATGGTTATGGCTGGCGTCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: AGSSSSPNASVSSGL*IPLGLSHGYGWRPN Trigger: ATTTGGACGCCAGCCATAACCATGTGATAACCCTAGAGGGATTCAGAGGCCTGATGAAACTGAAGCATTTGGACTTGAGCTGGAACCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
||
| CDS CCA 90 bp | GTGTGTTTGCACAGCACATTGATCTCTTCCCCAGTCTTCTTCAGCTaGTTCCAGCTCAAGTCCAAATGCTTCAGTTTCATCAGGCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VCLHSTLISSPVFFS*FQLKSKCFSFIRPL Trigger: CAGAGGCCTGATGAAACTGAAGCATTTGGACTTGAGCTGGAACCAGCTGAAGAAGACTGGGGAAGAGATCAATGTGCTGTGCAAACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS-3UTR CAA 90 bp | GGCTCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGTCTCCCGTGAGAAGGTTGTaGTTCATGCTGAGGCGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GSSEDCCSESLYSWLFLSPVRRL*FMLRRL Trigger: AAGCCGCCTCAGCATGAACAACAACCTTCTCACGGG...AGACAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS-3UTR CAA 90 bp | CAACCGAGTCTCCAAAGAACCCAGAAATTTCCAGTTCAGACGGCTACGATCATGAGCAGGGAACTTGGCTaGGAAAACGCGGTGTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: QPSLQRTQKFPVQTATIMSRELG*ENAVSL Trigger: TAATGACACCGCGTTTTCCAAGCCAAGTTCCCTGCT...CATGATCGTAGCCGTCTGAACTGGAAATTTCTGGGTTCTTTGGAGACTCGGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
||
| CDS GCA 90 bp | ATCTCTTCCCCAGTCTTCTTCAGCTGGTTCCAGCTCAAGTCCAAATaGTTCAGTTTCATCAGGCCTCTGAATCCCTCTAGGGTTATCACA | + |
|
Preference number: 5 (lower is better) Translates to: ISSPVFFSWFQLKSK*FSFIRPLNPSRVIT Trigger: TGTGATAACCCTAGAGGGATTCAGAGGCCTGATGAAACTGAAGCATTTGGACTTGAGCTGGAACCAGCTGAAGAAGACTGGGGAAGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
||
| CDS-3UTR CAA 90 bp | GTGAAGTCAGGTCCCAAGAAACGGCTAAATCCAGCAGGCAGAAGAACATTTGTTCCTTTGCTAGAGATCTaGAGTTCAGCCAGTTCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: VKSGPKKRLNPAGRRTFVPLLEI*SSASSR Trigger: ACGGGAACTGGCTGAACTCAAGATCTCTAGCAAAGG...AACAAATGTTCTTCTGCCTGCTGGATTTAGCCGTTTCTTGGGACCTGACTTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS-3UTR CAA 90 bp | CAACCGAGTCTCCAAAGAACCCAGAAATTTCCAGTTCAGACGGCTACGATCATGTTCTGGAGATTCACGTaGCTCACATTCCTGAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QPSLQRTQKFPVQTATIMFWRFT*LTFLKW Trigger: CCACTTCAGGAATGTGAGCAACGTGAATCTCCAGAA...CATGATCGTAGCCGTCTGAACTGGAAATTTCTGGGTTCTTTGGAGACTCGGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTCTCTATGAAGTCACAGCAAGTGAAGATCAGCAAAGACCAGAGAAGCGTTGCTGTCCGTAGCCACTaGAGGGCACTTTCTGGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: FLSMKSQQVKISKDQRSVAVRSH*RALSGR Trigger: TCTACCAGAAAGTGCCCTCAAGTGGCTACGGACAGC...AACGCTTCTCTGGTCTTTGCTGATCTTCACTTGCTGTGACTTCATAGAGAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
||
| CDS TCA 90 bp | TCTAAATTTAAGGCAGTTATCTTTGAGTACCAGTTCCCGGTCAGGTaGAAGTGGGGTCCCAGCTTGGAAATCTGGGTCAGGATTTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SKFKAVIFEYQFPVR*KWGPSLEIWVRILA Trigger: TGCCAAAATCCTGACCCAGATTTCCAAGCTGGGACCCCACTTTCACCTGACCGGGAACTGGTACTCAAAGATAACTGCCTTAAATTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CCA 90 bp | TGCTTCAGTTTCATCAGGCCTCTGAATCCCTCTAGGGTTATCACATaGTTATGGCTGGCGTCCAAATACTCAAGGTTGTACAAGTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: CFSFIRPLNPSRVIT*LWLASKYSRLYKWY Trigger: GTACCACTTGTACAACCTTGAGTATTTGGACGCCAGCCATAACCATGTGATAACCCTAGAGGGATTCAGAGGCCTGATGAAACTGAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CCA 90 bp | TCCACGGTCCTGATGGCTGATGAAGTCCAGTTTAGCTCTTGCATTTaGATAAAGTTTGAGTGTCCTTGTCGTTCGGCAATCATGTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: STVLMADEVQFSSCI*IKFECPCRSAIMSE Trigger: CTCTGACATGATTGCCGAACGACAAGGACACTCAAACTTTATCCAAATGCAAGAGCTAAACTGGACTTCATCAGCCATCAGGACCGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS-3UTR CAA 90 bp | TATGGCTCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGATCTGGGTCAGGATTTaGGCAGAGGGCCATGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: YGSSEDCCSESLYSWLFLIWVRI*AEGHVL Trigger: CAGTACATGGCCCTCTGCCAAAATCCTGACCCAGAT...CAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGAGCCATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR CAA 90 bp | TCCACACAGGTCTGCAGAAAGTGGCAAAAAGCAGGCAGAATGCCACAGGCATTTCTAAACTTTGCATTATaGGAGGCAAGTTCTCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: STQVCRKWQKAGRMPQAFLNFAL*EASSHC Trigger: GCAGTGAGAACTTGCCTCCAATAATGCAAAGTTTAG...AAATGCCTGTGGCATTCTGCCTGCTTTTTGCCACTTTCTGCAGACCTGTGTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| CDS GCA 90 bp | ATCAGATCCACGGTCCTGATGGCTGATGAAGTCCAGTTTAGCTCTTaGATTTGGATAAAGTTTGAGTGTCCTTGTCGTTCGGCAATCATG | + |
|
Preference number: 5 (lower is better) Translates to: IRSTVLMADEVQFSS*IWIKFECPCRSAIM Trigger: CATGATTGCCGAACGACAAGGACACTCAAACTTTATCCAAATGCAAGAGCTAAACTGGACTTCATCAGCCATCAGGACCGTGGATCTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CCA 90 bp | AGTTTCATCAGGCCTCTGAATCCCTCTAGGGTTATCACATGGTTATaGCTGGCGTCCAAATACTCAAGGTTGTACAAGTGGTACACATCA | + |
|
Preference number: 5 (lower is better) Translates to: SFIRPLNPSRVITWL*LASKYSRLYKWYTS Trigger: TGATGTGTACCACTTGTACAACCTTGAGTATTTGGACGCCAGCCATAACCATGTGATAACCCTAGAGGGATTCAGAGGCCTGATGAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS-3UTR CAA 90 bp | CCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTCAAGTGACGGCTTCCTTTTaGAGAGAGGGCTTGCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PLRIAVQNPSILGYFCLQVTASF*REGLLV Trigger: CACAAGCAAGCCCTCTCTCAAAAAGGAAGCCGTCAC...TTGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR CAA 90 bp | GGCTCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTTCTGGAGATTCACGTaGCTCACATTCCTGAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GSSEDCCSESLYSWLFLSFWRFT*LTFLKW Trigger: CCACTTCAGGAATGTGAGCAACGTGAATCTCCAGAA...AGACAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR CAA 90 bp | GAATTTATAGGAATTCCATCCAACATCTGTAAATTAGGCAGGCGGAATATGAGCAAACGTGTCGAGTCGTaGGAGAGACGGCAAGTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: EFIGIPSNICKLGRRNMSKRVES*ERRQVV Trigger: TACCACTTGCCGTCTCTCCAACGACTCGACACGTTT...GCTCATATTCCGCCTGCCTAATTTACAGATGTTGGATGGAATTCCTATAAATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR CAA 90 bp | GGCTCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGTCTCTTGTGTCGCTGTCTTaGAATCCCCTTTCAAGTATC | + |
|
Preference number: 5 (lower is better) Translates to: GSSEDCCSESLYSWLFLSLVSLS*NPLSSI Trigger: GATACTTGAAAGGGGATTCAAAGACAGCGACACAAG...AGACAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGAGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR CAA 90 bp | GAATTTATAGGAATTCCATCCAACATCTGTAAATTAGGCAGGCGGAATATGAGCAAGTGGGGTCCCAGCTaGGAAATCTGGGTCAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: EFIGIPSNICKLGRRNMSKWGPS*EIWVRI Trigger: AATCCTGACCCAGATTTCCAAGCTGGGACCCCACTT...GCTCATATTCCGCCTGCCTAATTTACAGATGTTGGATGGAATTCCTATAAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR CAA 90 bp | CCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTCAAAGAGATGTGATCCTGTaGTTCTCCAGAGAGAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PLRIAVQNPSILGYFCLQRDVIL*FSRERE Trigger: CTCCCTCTCTCTGGAGAACAACAGGATCACATCTCT...TTGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR CAA 90 bp | TCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTCAACTTCAGGAGTTAAGGTGGAATCCGCCAGCTCCTaGATTTGCTTTGCTGATACG | + |
|
Preference number: 5 (lower is better) Translates to: SESLYSWLFLSSTSGVKVESASS*ICFADT Trigger: CGTATCAGCAAAGCAAATCAAGGAGCTGGCGGATTC...CACCTTAACTCCTGAAGTTGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR CAA 90 bp | TTTTTGCTTGTAGTTCAGAGAAATGAAACTCAGCTTTTGCCCTATCATCAGAATGCTGTCCGTAGCCACTaGAGGGCACTTTCTGGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: FLLVVQRNETQLLPYHQNAVRSH*RALSGR Trigger: TCTACCAGAAAGTGCCCTCAAGTGGCTACGGACAGC...ATTCTGATGATAGGGCAAAAGCTGAGTTTCATTTCTCTGAACTACAAGCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR CAA 90 bp | TGCTTCAACCTCCCTATAGCCCACCAACCAAGGTTGTGGAGAAAGATGGTTAACGTGATATCCTGGATTTaGTTATATCCTAGGAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: CFNLPIAHQPRLWRKMVNVISWI*LYPRKS Trigger: ACTCTTCCTAGGATATAACAAAATCCAGGATATCAC...GTTAACCATCTTTCTCCACAACCTTGGTTGGTGGGCTATAGGGAGGTTGAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| CDS TCA 90 bp | AAGAACATTTGTTATTTTAATGGGAGAGGCTTTAACGTGGCAGAATaGCCCACCATCCGTAGAGTTGGTAACAGGAACGAACTTACATGG | + |
|
Preference number: 5 (lower is better) Translates to: KNICYFNGRGFNVAE*PTIRRVGNRNELTW Trigger: CCATGTAAGTTCGTTCCTGTTACCAACTCTACGGATGGTGGGTCATTCTGCCACGTTAAAGCCTCTCCCATTAAAATAACAAATGTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162159.8 |
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| CDS CCA 90 bp | CAGGCGGAATATGAGCACATGTCGATGAACCATTTTCCTACAAATTaGATTGCCATAGACAGTAAGCTCTCTGAGAGAAGGAATAACATC | + |
|
Preference number: 5 (lower is better) Translates to: QAEYEHMSMNHFPTN*IAIDSKLSERRNNI Trigger: GATGTTATTCCTTCTCTCAGAGAGCTTACTGTCTATGGCAATCCAATTTGTAGGAAAATGGTTCATCGACATGTGCTCATATTCCGCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162159.8 ENSMUST00000220791.2 |
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| CDS-3UTR CAA 90 bp | TCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTCATTTAAGCGAGTGAGCTaGGTCAAGTTAGTAAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSEDCCSESLYSWLFLSSFKRVS*VKLVRS Trigger: GGACCTTACTAACTTGACCAAGCTCACTCGCTTAAA...TGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS-3UTR CAA 90 bp | CTCTATTCTTGGCTATTTTTGTCTTCAACTTCAGGAGTTAAGGTGAAGTCAGGTAGCCTCAGAATACGGTaGTTGACTTTAATGACCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LYSWLFLSSTSGVKVKSGSLRIR*LTLMTR Trigger: GCGGGTCATTAAAGTCAACAACCGTATTCTGAGGCT...ACCTGACTTCACCTTAACTCCTGAAGTTGAAGACAAAAATAGCCAAGAATAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS-3UTR CAA 90 bp | CTCTATTCTTGGCTATTTTTGTCTTCAACTTCAGGAGTTAAGGTGAAGTCAGGTCCTTTCTTCTCCTCCTaGTATTTCTGCTGGAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LYSWLFLSSTSGVKVKSGPFFSS*YFCWRN Trigger: GTTCCTCCAGCAGAAATACAAGGAGGAGAAGAAAGG...ACCTGACTTCACCTTAACTCCTGAAGTTGAAGACAAAAATAGCCAAGAATAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTCATCTCTGATGTCTCAATaGAGACTCCATCCAAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSEDCCSESLYSWLFLSSSLMSQ*RLHPRL Trigger: AAGCCTTGGATGGAGTCTCAATTGAGACATCAGAGA...TGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS GCA 90 bp | AATGCAGAACCTCTAAACTTTGCATTATTGGAGGCAAGTTCTCACTaGCTACTGAATCTCTATTTAGTTTTGAGGTTCCTTGCTGTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: NAEPLNFALLEASSH*LLNLYLVLRFLAVR Trigger: ACGGACAGCAAGGAACCTCAAAACTAAATAGAGATTCAGTAGGCAGTGAGAACTTGCCTCCAATAATGCAAAGTTTAGAGGTTCTGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162159.8 ENSMUST00000220791.2 ENSMUST00000221360.2 |
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| CDS-3UTR CAA 90 bp | TATGGCTCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGAAGTTTCCTGCAAGGTaGAGGTCTTTTAGATTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YGSSEDCCSESLYSWLFLKFPAR*RSFRFF Trigger: GAAGAATCTAAAAGACCTCAACCTTGCAGGAAACTT...CAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGAGCCATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTATTTCTGTATGGCTCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTTTTCCAGTTGTTCATaGGGATCAAGACATCGACCA | + |
|
Preference number: 5 (lower is better) Translates to: KLFLYGSSEDCCSESLYSFSSCS*GSRHRP Trigger: TGGTCGATGTCTTGATCCCAATGAACAACTGGAAAA...AGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGAGCCATACAGAAATAACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTATTTCTGTATGGCTCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTTGGAGAGGTTATTATaGCTGAACGATGCCCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: KLFLYGSSEDCCSESLYSLERLL*LNDAHF Trigger: GAAATGGGCATCGTTCAGCAATAATAACCTCTCCAA...AGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGAGCCATACAGAAATAACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTCATCAAGGCCTTCCATTTaGGAGAGGTTATTATTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSEDCCSESLYSWLFLSSSRPSI*ERLLLL Trigger: CAGCAATAATAACCTCTCCAAAATGGAAGGCCTTGA...TGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS-3UTR CAA 90 bp | AGAATGCCACAGGCATTTCTCTCTATGAAGTCACAGCAAGTGAAGATCAGCAAAAATCTCTATTTAGTTTaGAGGTTCCTTGCTGTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: RMPQAFLSMKSQQVKISKNLYLV*RFLAVR Trigger: ACGGACAGCAAGGAACCTCAAAACTAAATAGAGATT...TTTGCTGATCTTCACTTGCTGTGACTTCATAGAGAGAAATGCCTGTGGCATTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
||
| CDS-3UTR CAA 90 bp | TTTTTGCTTGTAGTTCAGAGAAATGAAACTCAGCTTTTGCCCTATCATCAGAATAGCAGGGAACTTGGCTaGGAAAACGCGGTGTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: FLLVVQRNETQLLPYHQNSRELG*ENAVSL Trigger: TAATGACACCGCGTTTTCCAAGCCAAGTTCCCTGCT...ATTCTGATGATAGGGCAAAAGCTGAGTTTCATTTCTCTGAACTACAAGCAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS-3UTR CAA 90 bp | TATGGCTCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGGGTAGCTTCTGTAACTaGCATTTTCTGTCATTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: YGSSEDCCSESLYSWLFLGSFCN*HFLSFS Trigger: ACTAAATGACAGAAAATGCAAGTTACAGAAGCTACC...CAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGAGCCATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
||
| CDS-3UTR CAA 90 bp | TCATCAGAATTTATAGGAATTCCATCCAACATCTGTAAATTAGGCAGGCGGAATCTCAGAATACGGTTGTaGACTTTAATGACCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSEFIGIPSNICKLGRRNLRIRL*TLMTRF Trigger: GAAGCGGGTCATTAAAGTCAACAACCGTATTCTGAG...ATTCCGCCTGCCTAATTTACAGATGTTGGATGGAATTCCTATAAATTCTGATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR CAA 90 bp | TTTTTGCTTGTAGTTCAGAGAAATGAAACTCAGCTTTTGCCCTATCATCAGAATATCTTTGAGATGCAGTaGCCGTCTAATGTGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FLLVVQRNETQLLPYHQNIFEMQ*PSNVSS Trigger: GGAGCTCACATTAGACGGCAACTGCATCTCAAAGAT...ATTCTGATGATAGGGCAAAAGCTGAGTTTCATTTCTCTGAACTACAAGCAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR CAA 90 bp | CCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTCAAAATCTCTATTTAGTTTaGAGGTTCCTTGCTGTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: PLRIAVQNPSILGYFCLQNLYLV*RFLAVR Trigger: ACGGACAGCAAGGAACCTCAAAACTAAATAGAGATT...TTGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR CAA 90 bp | CTCTATTCTTGGCTATTTTTGTCTTCAACTTCAGGAGTTAAGGTGAAGTCAGGTCTAAACTTTGCATTATaGGAGGCAAGTTCTCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: LYSWLFLSSTSGVKVKSGLNFAL*EASSHC Trigger: GCAGTGAGAACTTGCCTCCAATAATGCAAAGTTTAG...ACCTGACTTCACCTTAACTCCTGAAGTTGAAGACAAAAATAGCCAAGAATAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR CAA 90 bp | AGAATGCCACAGGCATTTCTCTCTATGAAGTCACAGCAAGTGAAGATCAGCAAAAAGTTACAAATTCCATaGTATCCCAAATGCAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: RMPQAFLSMKSQQVKISKKLQIP*YPKCRT Trigger: GGTTCTGCATTTGGGATACAATGGAATTTGTAACTT...TTTGCTGATCTTCACTTGCTGTGACTTCATAGAGAGAAATGCCTGTGGCATTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220791.2 |
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| CDS-3UTR CAA 90 bp | AAGTTATTTCTGTATGGCTCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTCAAATTTCTACATCCTaGAAGGCCTTCAATTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KLFLYGSSEDCCSESLYSQISTS*KAFNFL Trigger: GAGAAAATTGAAGGCCTTCAAGGATGTAGAAATTTG...AGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGAGCCATACAGAAATAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR CAA 90 bp | TTTTTGCTTGTAGTTCAGAGAAATGAAACTCAGCTTTTGCCCTATCATCAGAATTCTTCAAAATGGATATaGCCCACAGTCTCCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FLLVVQRNETQLLPYHQNSSKWI*PTVSSS Trigger: TGAGCTGGAGACTGTGGGCAATATCCATTTTGAAGA...ATTCTGATGATAGGGCAAAAGCTGAGTTTCATTTCTCTGAACTACAAGCAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR CAA 90 bp | TCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTCATCTAGAATGACCAAGTaGCATAAACCCTTTAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSEDCCSESLYSWLFLSSSRMTK*HKPFKL Trigger: CAACTTAAAGGGTTTATGCAACTTGGTCATTCTAGA...TGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR CAA 90 bp | AAGTTATTTCTGTATGGCTCCTCTGAGGATTGCTGTTCAGAATCCCTCTATTCTAAGTTACAAATTCCATaGTATCCCAAATGCAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: KLFLYGSSEDCCSESLYSKLQIP*YPKCRT Trigger: GGTTCTGCATTTGGGATACAATGGAATTTGTAACTT...AGAATAGAGGGATTCTGAACAGCAATCCTCAGAGGAGCCATACAGAAATAACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS GCA 90 bp | TTAAGTTGTAGCTGGACTAAGTTACAAATTCCATTGTATCCCAAATaGAGAACCTCTAAACTTTGCATTATTGGAGGCAAGTTCTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: LSCSWTKLQIPLYPK*RTSKLCIIGGKFSL Trigger: CAGTGAGAACTTGCCTCCAATAATGCAAAGTTTAGAGGTTCTGCATTTGGGATACAATGGAATTTGTAACTTAGTCCAGCTACAACTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162159.8 ENSMUST00000220791.2 ENSMUST00000221360.2 |
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| CDS-3UTR CAA 90 bp | GAATTTATAGGAATTCCATCCAACATCTGTAAATTAGGCAGGCGGAATATGAGCAAAACATCTCCAGTTTaGAAGTATCTGATCCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: EFIGIPSNICKLGRRNMSKTSPV*KYLILP Trigger: AGGAAGGATCAGATACTTCAAAACTGGAGATGTTTT...GCTCATATTCCGCCTGCCTAATTTACAGATGTTGGATGGAATTCCTATAAATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS-3UTR CAA 90 bp | TCAGAATCCCTCTATTCTTGGCTATTTTTGTCTTCAACTTCAGGAGTTAAGGTGGTGATATCCTGGATTTaGTTATATCCTAGGAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SESLYSWLFLSSTSGVKVVISWI*LYPRKS Trigger: ACTCTTCCTAGGATATAACAAAATCCAGGATATCAC...CACCTTAACTCCTGAAGTTGAAGACAAAAATAGCCAAGAATAGAGGGATTCTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221360.2 |
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| CDS GCA 72 bp | TTCCGGGGTTTCTCGGCCTCCGGCGTTGTATCGCTCTaGCCTTTGCTAGAGATCTTGAGTTCAGCCAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: FRGFSASGVVSL*PLLEILSSASS Trigger: GGAACTGGCTGAACTCAAGATCTCTAGCAAAGGGCAGAGCGATACAACGCCGGAGGCCGAGAAACCCCGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CCA 72 bp | GAAAACGCGGTGTCATTAAAGGCCCGGATGCGGTTATaGTCGACGACCAGCTCCTGGAGGACGATCAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ENAVSLKARMRL*STTSSWRTIRL Trigger: CAACCTGATCGTCCTCCAGGAGCTGGTCGTCGACCATAACCGCATCCGGGCCTTTAATGACACCGCGTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162159.8 ENSMUST00000220791.2 ENSMUST00000221360.2 |
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| CDS GCA 72 bp | GATGTCTTTGAGGGCAAATATGGCTCTGCAGCCACGTaGCTTCACGTTGGGCAGGTAGATGAGGCCGCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: DVFEGKYGSAAT*LHVGQVDEAAE Trigger: TTCAGCGGCCTCATCTACCTGCCCAACGTGAAGGCACGTGGCTGCAGAGCCATATTTGCCCTCAAAGACATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161284.3 |
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| CDS CAA 72 bp | GGTTTCTCGGCCTCCGGCGTTGTATCGCTCTGCCCTTaGCTAGAGATCTTGAGTTCAGCCAGTTCCCGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GFSASGVVSLCP*LEILSSASSRS Trigger: AGAACGGGAACTGGCTGAACTCAAGATCTCTAGCAAAGGGCAGAGCGATACAACGCCGGAGGCCGAGAAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CAA 90 bp | CTATTCCGGGGTTTCTCGGCCTCCGGCGTTGTATCGCTCTGCCCTTaGCTAGAGATCTTGAGTTCAGCCAGTTCCCGTTCTAACGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LFRGFSASGVVSLCP*LEILSSASSRSNVF Trigger: GAAAACGTTAGAACGGGAACTGGCTGAACTCAAGATCTCTAGCAAAGGGCAGAGCGATACAACGCCGGAGGCCGAGAAACCCCGGAATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS TCA 72 bp | TGCTGTGGAATCCGCCAGCTCCTTGATTTGCTTTGCTaGTACGTCAAACGTGTCGAGTCGTTGGAGAGACGG | + |
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Preference number: 6 (lower is better) Translates to: CCGIRQLLDLLC*YVKRVESLERR Trigger: CCGTCTCTCCAACGACTCGACACGTTTGACGTATCAGCAAAGCAAATCAAGGAGCTGGCGGATTCCACAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS TCA 72 bp | AAGGCAGTTATCTTTGAGTACCAGTTCCCGGTCAGGTaGAAGTGGGGTCCCAGCTTGGAAATCTGGGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: KAVIFEYQFPVR*KWGPSLEIWVR Trigger: CCTGACCCAGATTTCCAAGCTGGGACCCCACTTTCACCTGACCGGGAACTGGTACTCAAAGATAACTGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CAA 72 bp | TCAAACGTGTGCTTCTCCAGGCCCGTGAGAAGGTTGTaGTTCATGCTGAGGCGGCTTAACTTTGTCAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SNVCFSRPVRRL*FMLRRLNFVSL Trigger: CAGGCTGACAAAGTTAAGCCGCCTCAGCATGAACAACAACCTTCTCACGGGCCTGGAGAAGCACACGTTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CAA 90 bp | AGCAGGTTATCAAACGTGTGCTTCTCCAGGCCCGTGAGAAGGTTGTaGTTCATGCTGAGGCGGCTTAACTTTGTCAGCCTGGTGATGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SRLSNVCFSRPVRRL*FMLRRLNFVSLVMP Trigger: AGGCATCACCAGGCTGACAAAGTTAAGCCGCCTCAGCATGAACAACAACCTTCTCACGGGCCTGGAGAAGCACACGTTTGATAACCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS TCA 72 bp | TCCTGGAGGACGATCAGGTTGTCCAGCCCTTCCACCTaGCTGATCTCATTTCCCTGGAGAAAGAGGAACTTT | + |
|
Preference number: 6 (lower is better) Translates to: SWRTIRLSSPST*LISFPWRKRNF Trigger: AAAGTTCCTCTTTCTCCAGGGAAATGAGATCAGTCAGGTGGAAGGGCTGGACAACCTGATCGTCCTCCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162159.8 ENSMUST00000220791.2 ENSMUST00000221360.2 |
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| CDS CAA 72 bp | GTCAGCCTGGTGATGCCTTCTATCTTTGAGATGCAGTaGCCGTCTAATGTGAGCTCCTCCAGGTTGACACAG | + |
|
Preference number: 6 (lower is better) Translates to: VSLVMPSIFEMQ*PSNVSSSRLTQ Trigger: CTGTGTCAACCTGGAGGAGCTCACATTAGACGGCAACTGCATCTCAAAGATAGAAGGCATCACCAGGCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CAA 90 bp | TTCTCGGCCTCCGGCGTTGTATCGCTCTGCCCTTTGCTAGAGATCTaGAGTTCAGCCAGTTCCCGTTCTAACGTTTTCTTTGCAAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: FSASGVVSLCPLLEI*SSASSRSNVFFAKL Trigger: CAACTTTGCAAAGAAAACGTTAGAACGGGAACTGGCTGAACTCAAGATCTCTAGCAAAGGGCAGAGCGATACAACGCCGGAGGCCGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS TCA 72 bp | AGCGCTCAGCTTGGTCAGTATCTTCTGCTGCAGAACTaGTTCCTGTGTGACAACCTCACTATTCCGGGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SAQLGQYLLLQN*FLCDNLTIPGF Trigger: AAACCCCGGAATAGTGAGGTTGTCACACAGGAATCAGTTCTGCAGCAGAAGATACTGACCAAGCTGAGCGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS GCA 72 bp | AGTCATCAGCCTGAGTGCCTTCTTCAAAATGGATATTaGCCACAGTCTCCAGCTCAGTTAGCAGAAACGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SHQPECLLQNGY*PQSPAQLAETG Trigger: CCCCGTTTCTGCTAACTGAGCTGGAGACTGTGGGCAATATCCATTTTGAAGAAGGCACTCAGGCTGATGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CCA 72 bp | TTGTTCTGGAGATTCACGTTGCTCACATTCCTGAAGTaGTCGACAGGAATCAGATCCACGGTCCTGATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LFWRFTLLTFLK*STGIRSTVLMA Trigger: AGCCATCAGGACCGTGGATCTGATTCCTGTCGACCACTTCAGGAATGTGAGCAACGTGAATCTCCAGAACAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000220791.2 ENSMUST00000221360.2 |
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| CDS CAA 72 bp | TATTTAGTTTTGAGGTTCCTTGCTGTCCGTAGCCACTaGAGGGCACTTTCTGGTAGAGCAGCTGTCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: YLVLRFLAVRSH*RALSGRAAVCC Trigger: GCAGCAGACAGCTGCTCTACCAGAAAGTGCCCTCAAGTGGCTACGGACAGCAAGGAACCTCAAAACTAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162159.8 ENSMUST00000220791.2 ENSMUST00000221360.2 |
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| CDS CAA 90 bp | CTGAGGCTGTTCACAAGAGTGACGGCTTCCTTTTTGAGAGAGGGCTaGCTTGTGTCGCTGTCTTTGAATCCCCTTTCAAGTATCTGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: LRLFTRVTASFLREG*LVSLSLNPLSSICS Trigger: GCTACAGATACTTGAAAGGGGATTCAAAGACAGCGACACAAGCAAGCCCTCTCTCAAAAAGGAAGCCGTCACTCTTGTGAACAGCCTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CAA 90 bp | CACTCACACATACTGAGGCTGTTCACAAGAGTGACGGCTTCCTTTTaGAGAGAGGGCTTGCTTGTGTCGCTGTCTTTGAATCCCCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: HSHILRLFTRVTASF*REGLLVSLSLNPLS Trigger: TGAAAGGGGATTCAAAGACAGCGACACAAGCAAGCCCTCTCTCAAAAAGGAAGCCGTCACTCTTGTGAACAGCCTCAGTATGTGTGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CAA 90 bp | CTTAACTTTGTCAGCCTGGTGATGCCTTCTATCTTTGAGATGCAGTaGCCGTCTAATGTGAGCTCCTCCAGGTTGACACAGGACTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LNFVSLVMPSIFEMQ*PSNVSSSRLTQDSR Trigger: CCTTGAGTCCTGTGTCAACCTGGAGGAGCTCACATTAGACGGCAACTGCATCTCAAAGATAGAAGGCATCACCAGGCTGACAAAGTTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CAA 90 bp | CTGAATCTCTATTTAGTTTTGAGGTTCCTTGCTGTCCGTAGCCACTaGAGGGCACTTTCTGGTAGAGCAGCTGTCTGCTGCTTAAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LNLYLVLRFLAVRSH*RALSGRAAVCCLSG Trigger: CCCACTTAAGCAGCAGACAGCTGCTCTACCAGAAAGTGCCCTCAAGTGGCTACGGACAGCAAGGAACCTCAAAACTAAATAGAGATTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162159.8 ENSMUST00000220791.2 ENSMUST00000221360.2 |
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| CDS CAA 90 bp | ATGGGAGAGGCTTTAACGTGGCAGAATGACCCACCATCCGTAGAGTaGGTAACAGGAACGAACTTACATGGCAAAGGAGTTTGCAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: MGEALTWQNDPPSVE*VTGTNLHGKGVCRC Trigger: ACACCTGCAAACTCCTTTGCCATGTAAGTTCGTTCCTGTTACCAACTCTACGGATGGTGGGTCATTCTGCCACGTTAAAGCCTCTCCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162159.8 |
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| CDS TCA 72 bp | AATGAGGATGGTGCCATGTCTGTAGAGTTCACTCTCTaGGGGGCCTTTCTTCTCCTCCTTGTATTTCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: NEDGAMSVEFTL*GAFLLLLVFLL Trigger: CAGCAGAAATACAAGGAGGAGAAGAAAGGCCCCTCAGAGAGTGAACTCTACAGACATGGCACCATCCTCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS TCA 72 bp | GAGCCTGAATACTCTGGCCAAGAAAAACCTTCGCAATaGGGATGGTGCCATGTCTGTAGAGTTCACTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: EPEYSGQEKPSQ*GWCHVCRVHSL Trigger: CAGAGAGTGAACTCTACAGACATGGCACCATCCTCATTGCGAAGGTTTTTCTTGGCCAGAGTATTCAGGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS GCA 72 bp | TCATCCAGAGCGCTCAGCTTGGTCAGTATCTTCTGCTaGAGAACTGATTCCTGTGTGACAACCTCACTATTC | + |
|
Preference number: 6 (lower is better) Translates to: SSRALSLVSIFC*RTDSCVTTSLF Trigger: GAATAGTGAGGTTGTCACACAGGAATCAGTTCTGCAGCAGAAGATACTGACCAAGCTGAGCGCTCTGGATGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CCA 72 bp | AGGCCTCTGAATCCCTCTAGGGTTATCACATGGTTATaGCTGGCGTCCAAATACTCAAGGTTGTACAAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RPLNPSRVITWL*LASKYSRLYKW Trigger: CCACTTGTACAACCTTGAGTATTTGGACGCCAGCCATAACCATGTGATAACCCTAGAGGGATTCAGAGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CAA 72 bp | TCCGGCGTTGTATCGCTCTGCCCTTTGCTAGAGATCTaGAGTTCAGCCAGTTCCCGTTCTAACGTTTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SGVVSLCPLLEI*SSASSRSNVFF Trigger: AAAGAAAACGTTAGAACGGGAACTGGCTGAACTCAAGATCTCTAGCAAAGGGCAGAGCGATACAACGCCGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CAA 90 bp | AGTTTCTTGTTCCAGAATGTAACTCTGTCATCCAGAGCGCTCAGCTaGGTCAGTATCTTCTGCTGCAGAACTGATTCCTGTGTGACAACC | + |
|
Preference number: 6 (lower is better) Translates to: SFLFQNVTLSSRALS*VSIFCCRTDSCVTT Trigger: GGTTGTCACACAGGAATCAGTTCTGCAGCAGAAGATACTGACCAAGCTGAGCGCTCTGGATGACAGAGTTACATTCTGGAACAAGAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CAA 90 bp | CACTTTTGGAATTTCTCTTCAAACTTCAGCCTCAGAATACGGTTGTaGACTTTAATGACCCGCTTCACCTTCACCCCCGTGATGCCGTAC | + |
|
Preference number: 6 (lower is better) Translates to: HFWNFSSNFSLRIRL*TLMTRFTFTPVMPY Trigger: GTACGGCATCACGGGGGTGAAGGTGAAGCGGGTCATTAAAGTCAACAACCGTATTCTGAGGCTGAAGTTTGAAGAGAAATTCCAAAAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS TCA 72 bp | AGCTCAAGTCCAAATGCTTCAGTTTCATCAGGCCTCTaGATCCCTCTAGGGTTATCACATGGTTATGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSSPNASVSSGL*IPLGLSHGYGW Trigger: CCAGCCATAACCATGTGATAACCCTAGAGGGATTCAGAGGCCTGATGAAACTGAAGCATTTGGACTTGAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS GCA 72 bp | TTGGTAACAGGAACGAACTTACATGGCAAAGGAGTTTaGAGGTGTGATGGAAGTGAGGACTTGGAAGTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LVTGTNLHGKGV*RCDGSEDLEVG Trigger: CCCTACTTCCAAGTCCTCACTTCCATCACACCTGCAAACTCCTTTGCCATGTAAGTTCGTTCCTGTTACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162159.8 |
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| CDS CCA 72 bp | TTCATCAGGCCTCTGAATCCCTCTAGGGTTATCACATaGTTATGGCTGGCGTCCAAATACTCAAGGTTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: FIRPLNPSRVIT*LWLASKYSRLY Trigger: GTACAACCTTGAGTATTTGGACGCCAGCCATAACCATGTGATAACCCTAGAGGGATTCAGAGGCCTGATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CCA 72 bp | CACAGCACATTGATCTCTTCCCCAGTCTTCTTCAGCTaGTTCCAGCTCAAGTCCAAATGCTTCAGTTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: HSTLISSPVFFS*FQLKSKCFSFI Trigger: GATGAAACTGAAGCATTTGGACTTGAGCTGGAACCAGCTGAAGAAGACTGGGGAAGAGATCAATGTGCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CAA 72 bp | TTCACAAGAGTGACGGCTTCCTTTTTGAGAGAGGGCTaGCTTGTGTCGCTGTCTTTGAATCCCCTTTCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: FTRVTASFLREG*LVSLSLNPLSS Trigger: ACTTGAAAGGGGATTCAAAGACAGCGACACAAGCAAGCCCTCTCTCAAAAAGGAAGCCGTCACTCTTGTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CAA 72 bp | ATACTGAGGCTGTTCACAAGAGTGACGGCTTCCTTTTaGAGAGAGGGCTTGCTTGTGTCGCTGTCTTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: ILRLFTRVTASF*REGLLVSLSLN Trigger: ATTCAAAGACAGCGACACAAGCAAGCCCTCTCTCAAAAAGGAAGCCGTCACTCTTGTGAACAGCCTCAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CAA 72 bp | TCCTCCAGGTTGACACAGGACTCAAGGCCTTCCATTTaGGAGAGGTTATTATTGCTGAACGATGCCCATTTC | + |
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Preference number: 6 (lower is better) Translates to: SSRLTQDSRPSI*ERLLLLNDAHF Trigger: GAAATGGGCATCGTTCAGCAATAATAACCTCTCCAAAATGGAAGGCCTTGAGTCCTGTGTCAACCTGGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CAA 72 bp | GCAAGTTCTCACTGCCTACTGAATCTCTATTTAGTTTaGAGGTTCCTTGCTGTCCGTAGCCACTTGAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: ASSHCLLNLYLV*RFLAVRSHLRA Trigger: TGCCCTCAAGTGGCTACGGACAGCAAGGAACCTCAAAACTAAATAGAGATTCAGTAGGCAGTGAGAACTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162159.8 ENSMUST00000220791.2 ENSMUST00000221360.2 |
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| CDS CAA 90 bp | AAACACTTTTGGAATTTCTCTTCAAACTTCAGCCTCAGAATACGGTaGTTGACTTTAATGACCCGCTTCACCTTCACCCCCGTGATGCCG | + |
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Preference number: 6 (lower is better) Translates to: KHFWNFSSNFSLRIR*LTLMTRFTFTPVMP Trigger: CGGCATCACGGGGGTGAAGGTGAAGCGGGTCATTAAAGTCAACAACCGTATTCTGAGGCTGAAGTTTGAAGAGAAATTCCAAAAGTGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CAA 90 bp | AATGTGAGCTCCTCCAGGTTGACACAGGACTCAAGGCCTTCCATTTaGGAGAGGTTATTATTGCTGAACGATGCCCATTTCAAATTCTCC | + |
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Preference number: 6 (lower is better) Translates to: NVSSSRLTQDSRPSI*ERLLLLNDAHFKFS Trigger: GGAGAATTTGAAATGGGCATCGTTCAGCAATAATAACCTCTCCAAAATGGAAGGCCTTGAGTCCTGTGTCAACCTGGAGGAGCTCACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CAA 90 bp | TCTATCTTTGAGATGCAGTTGCCGTCTAATGTGAGCTCCTCCAGGTaGACACAGGACTCAAGGCCTTCCATTTTGGAGAGGTTATTATTG | + |
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Preference number: 6 (lower is better) Translates to: SIFEMQLPSNVSSSR*TQDSRPSILERLLL Trigger: CAATAATAACCTCTCCAAAATGGAAGGCCTTGAGTCCTGTGTCAACCTGGAGGAGCTCACATTAGACGGCAACTGCATCTCAAAGATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CAA 90 bp | TTATTGGAGGCAAGTTCTCACTGCCTACTGAATCTCTATTTAGTTTaGAGGTTCCTTGCTGTCCGTAGCCACTTGAGGGCACTTTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: LLEASSHCLLNLYLV*RFLAVRSHLRALSG Trigger: ACCAGAAAGTGCCCTCAAGTGGCTACGGACAGCAAGGAACCTCAAAACTAAATAGAGATTCAGTAGGCAGTGAGAACTTGCCTCCAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162159.8 ENSMUST00000220791.2 ENSMUST00000221360.2 |
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| CDS GCA 72 bp | ACGGTCCTGATGGCTGATGAAGTCCAGTTTAGCTCTTaGATTTGGATAAAGTTTGAGTGTCCTTGTCGTTCG | + |
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Preference number: 6 (lower is better) Translates to: TVLMADEVQFSS*IWIKFECPCRS Trigger: CGAACGACAAGGACACTCAAACTTTATCCAAATGCAAGAGCTAAACTGGACTTCATCAGCCATCAGGACCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CAA 72 bp | AATTTCTCTTCAAACTTCAGCCTCAGAATACGGTTGTaGACTTTAATGACCCGCTTCACCTTCACCCCCGTG | + |
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Preference number: 6 (lower is better) Translates to: NFSSNFSLRIRL*TLMTRFTFTPV Trigger: CACGGGGGTGAAGGTGAAGCGGGTCATTAAAGTCAACAACCGTATTCTGAGGCTGAAGTTTGAAGAGAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CAA 72 bp | TGGAATTTCTCTTCAAACTTCAGCCTCAGAATACGGTaGTTGACTTTAATGACCCGCTTCACCTTCACCCCC | + |
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Preference number: 6 (lower is better) Translates to: WNFSSNFSLRIR*LTLMTRFTFTP Trigger: GGGGGTGAAGGTGAAGCGGGTCATTAAAGTCAACAACCGTATTCTGAGGCTGAAGTTTGAAGAGAAATTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CAA 72 bp | TTGAAGCTAATGTTCAGCTTCCGAAGCCCAGTTAGCTaGGCAAGATCTCTCAGTTTACTCAAGCTATTCCCG | + |
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Preference number: 6 (lower is better) Translates to: LKLMFSFRSPVS*ARSLSLLKLFP Trigger: CGGGAATAGCTTGAGTAAACTGAGAGATCTTGCCAAGCTAACTGGGCTTCGGAAGCTGAACATTAGCTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CAA 72 bp | GGGTCGTTCAGACACAAGTCCTTTAAGCGAGTGAGCTaGGTCAAGTTAGTAAGGTCCTTGAAGGAAGTAATT | + |
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Preference number: 6 (lower is better) Translates to: GSFRHKSFKRVS*VKLVRSLKEVI Trigger: AATTACTTCCTTCAAGGACCTTACTAACTTGACCAAGCTCACTCGCTTAAAGGACTTGTGTCTGAACGACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CAA 72 bp | AAGGCACTCCAGCATCTTCCGGTAACTCTCCGGATCTaGTGTGTCTTCAAGATCCAAACACTTTTGGAATTT | + |
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Preference number: 6 (lower is better) Translates to: KALQHLPVTLRI*CVFKIQTLLEF Trigger: AAATTCCAAAAGTGTTTGGATCTTGAAGACACACAAGATCCGGAGAGTTACCGGAAGATGCTGGAGTGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161284.3 ENSMUST00000221360.2 |
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| CDS CAA 72 bp | AGAGATGTTGTCCATCTAAATTTAAGGCAGTTATCTTaGAGTACCAGTTCCCGGTCAGGTGAAAGTGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: RDVVHLNLRQLS*STSSRSGESGV Trigger: GACCCCACTTTCACCTGACCGGGAACTGGTACTCAAAGATAACTGCCTTAAATTTAGATGGACAACATCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CAA 72 bp | GGCAAAGGAGTTTGCAGGTGTGATGGAAGTGAGGACTaGGAAGTAGGGAGATTATTCTGGATTATCGAACTT | + |
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Preference number: 6 (lower is better) Translates to: GKGVCRCDGSED*EVGRLFWIIEL Trigger: AAGTTCGATAATCCAGAATAATCTCCCTACTTCCAAGTCCTCACTTCCATCACACCTGCAAACTCCTTTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162159.8 |
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| CDS CAA 90 bp | CCGGTAACTCTCCGGATCTTGTGTGTCTTCAAGATCCAAACACTTTaGGAATTTCTCTTCAAACTTCAGCCTCAGAATACGGTTGTTGAC | + |
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Preference number: 6 (lower is better) Translates to: PVTLRILCVFKIQTL*EFLFKLQPQNTVVD Trigger: GTCAACAACCGTATTCTGAGGCTGAAGTTTGAAGAGAAATTCCAAAAGTGTTTGGATCTTGAAGACACACAAGATCCGGAGAGTTACCGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161284.3 ENSMUST00000221360.2 |
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| CDS CAA 90 bp | GACGTAGAAAAGGCACTCCAGCATCTTCCGGTAACTCTCCGGATCTaGTGTGTCTTCAAGATCCAAACACTTTTGGAATTTCTCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: DVEKALQHLPVTLRI*CVFKIQTLLEFLFK Trigger: TTTGAAGAGAAATTCCAAAAGTGTTTGGATCTTGAAGACACACAAGATCCGGAGAGTTACCGGAAGATGCTGGAGTGCCTTTTCTACGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161284.3 ENSMUST00000221360.2 |
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| CDS CAA 90 bp | GTAAACTCATTGAAGCTAATGTTCAGCTTCCGAAGCCCAGTTAGCTaGGCAAGATCTCTCAGTTTACTCAAGCTATTCCCGTGTAGATTC | + |
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Preference number: 6 (lower is better) Translates to: VNSLKLMFSFRSPVS*ARSLSLLKLFPCRF Trigger: GAATCTACACGGGAATAGCTTGAGTAAACTGAGAGATCTTGCCAAGCTAACTGGGCTTCGGAAGCTGAACATTAGCTTCAATGAGTTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS TCA 72 bp | GGATTTTGTTATATCCTAGGAAGAGTTTCTCCAGTTTaGCCAAAGACTGCAGTTTGCTTAGTTCTCGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: GFCYILGRVSPV*PKTAVCLVLAA Trigger: GGCTGCGAGAACTAAGCAAACTGCAGTCTTTGGTCAAACTGGAGAAACTCTTCCTAGGATATAACAAAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162159.8 ENSMUST00000220791.2 ENSMUST00000221360.2 |
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| CDS CAA 72 bp | CTATTCGGGGATACCCTGAGAAAAACATCTCCAGTTTaGAAGTATCTGATCCTTCCTGTCCAACGATCTCAT | + |
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Preference number: 6 (lower is better) Translates to: LFGDTLRKTSPV*KYLILPVQRSH Trigger: ATGAGATCGTTGGACAGGAAGGATCAGATACTTCAAAACTGGAGATGTTTTTCTCAGGGTATCCCCGAATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CAA 90 bp | GGATCAAGACATCGACCAATGCTGCTGACTAAGTTTCCTGCAAGGTaGAGGTCTTTTAGATTCTTCAAAGTCTGCAAGCCCTCAATATTT | + |
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Preference number: 6 (lower is better) Translates to: GSRHRPMLLTKFPAR*RSFRFFKVCKPSIF Trigger: AAATATTGAGGGCTTGCAGACTTTGAAGAATCTAAAAGACCTCAACCTTGCAGGAAACTTAGTCAGCAGCATTGGTCGATGTCTTGATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CAA 90 bp | TCAAGGTTGTACAAGTGGTACACATCATCTAAGCAAGTAAACTCATaGAAGCTAATGTTCAGCTTCCGAAGCCCAGTTAGCTTGGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: SRLYKWYTSSKQVNS*KLMFSFRSPVSLAR Trigger: TCTTGCCAAGCTAACTGGGCTTCGGAAGCTGAACATTAGCTTCAATGAGTTTACTTGCTTAGATGATGTGTACCACTTGTACAACCTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CAA 90 bp | CTTCCGGTAATCCGGATCTTGTGTGTCTTCAAGATCCAAACACTTTaGGAATTTCTCTTCAAACTTCAGCCTCAGAATACGGTTGTTGAC | + |
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Preference number: 6 (lower is better) Translates to: LPVIRILCVFKIQTL*EFLFKLQPQNTVVD Trigger: GTCAACAACCGTATTCTGAGGCTGAAGTTTGAAGAGAAATTCCAAAAGTGTTTGGATCTTGAAGACACACAAGATCCGGATTACCGGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162159.8 |
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| CDS CAA 90 bp | GTGATATCCTGGATTTTGTTATATCCTAGGAAGAGTTTCTCCAGTTaGACCAAAGACTGCAGTTTGCTTAGTTCTCGCAGCCTGTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: VISWILLYPRKSFSS*TKDCSLLSSRSLFS Trigger: GGAAAACAGGCTGCGAGAACTAAGCAAACTGCAGTCTTTGGTCAAACTGGAGAAACTCTTCCTAGGATATAACAAAATCCAGGATATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000162159.8 ENSMUST00000220791.2 ENSMUST00000221360.2 |
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| CDS CCA 72 bp | TATGAGCACATGTCGATGAACCATTTTCCTACAAATTaGATTGCCATAGACAGTAAGCTCTCTGAGAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: YEHMSMNHFPTN*IAIDSKLSERR Trigger: CCTTCTCTCAGAGAGCTTACTGTCTATGGCAATCCAATTTGTAGGAAAATGGTTCATCGACATGTGCTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162159.8 ENSMUST00000220791.2 |
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| CDS CAA 72 bp | TACAAGTGGTACACATCATCTAAGCAAGTAAACTCATaGAAGCTAATGTTCAGCTTCCGAAGCCCAGTTAGC | + |
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Preference number: 6 (lower is better) Translates to: YKWYTSSKQVNS*KLMFSFRSPVS Trigger: GCTAACTGGGCTTCGGAAGCTGAACATTAGCTTCAATGAGTTTACTTGCTTAGATGATGTGTACCACTTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CAA 90 bp | AAAGACGTAGAAAAGGCACTCCAGCATCTTCCGGTAATCCGGATCTaGTGTGTCTTCAAGATCCAAACACTTTTGGAATTTCTCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: KDVEKALQHLPVIRI*CVFKIQTLLEFLFK Trigger: TTTGAAGAGAAATTCCAAAAGTGTTTGGATCTTGAAGACACACAAGATCCGGATTACCGGAAGATGCTGGAGTGCCTTTTCTACGTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162159.8 |
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| CDS CAA 90 bp | ATAATCCAACTATTCGGGGATACCCTGAGAAAAACATCTCCAGTTTaGAAGTATCTGATCCTTCCTGTCCAACGATCTCATAAGTTAAGC | + |
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Preference number: 6 (lower is better) Translates to: IIQLFGDTLRKTSPV*KYLILPVQRSHKLS Trigger: GCTTAACTTATGAGATCGTTGGACAGGAAGGATCAGATACTTCAAAACTGGAGATGTTTTTCTCAGGGTATCCCCGAATAGTTGGATTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS TCA 72 bp | CAGCCAGTTCCCGTTCTAACGTTTTCTTTGCAAAGTTaGATAATTTTATCCGTTCTTCGGGTAGCTTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: QPVPVLTFSLQS*IILSVLRVASV Trigger: TACAGAAGCTACCCGAAGAACGGATAAAATTATTCAACTTTGCAAAGAAAACGTTAGAACGGGAACTGGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CCA 72 bp | TTATGGCTGGCGTCCAAATACTCAAGGTTGTACAAGTaGTACACATCATCTAAGCAAGTAAACTCATTGAAG | + |
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Preference number: 6 (lower is better) Translates to: LWLASKYSRLYK*YTSSKQVNSLK Trigger: CTTCAATGAGTTTACTTGCTTAGATGATGTGTACCACTTGTACAACCTTGAGTATTTGGACGCCAGCCATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS CAA 90 bp | AGGTTGACACAGGACTCAAGGCCTTCCATTTTGGAGAGGTTATTATaGCTGAACGATGCCCATTTCAAATTCTCCAATTTTTCTAGATTT | + |
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Preference number: 6 (lower is better) Translates to: RLTQDSRPSILERLL*LNDAHFKFSNFSRF Trigger: AAATCTAGAAAAATTGGAGAATTTGAAATGGGCATCGTTCAGCAATAATAACCTCTCCAAAATGGAAGGCCTTGAGTCCTGTGTCAACCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000161284.3 ENSMUST00000162159.8 ENSMUST00000221360.2 |
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| CDS GCA 72 bp | CCTCTAAACTTTGCATTATTGGAGGCAAGTTCTCACTaGCTACTGAATCTCTATTTAGTTTTGAGGTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: PLNFALLEASSH*LLNLYLVLRFL Trigger: AAGGAACCTCAAAACTAAATAGAGATTCAGTAGGCAGTGAGAACTTGCCTCCAATAATGCAAAGTTTAGAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162159.8 ENSMUST00000220791.2 ENSMUST00000221360.2 |
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| CDS CAA 90 bp | AAATTCCATTGTATCCCAAATGCAGAACCTCTAAACTTTGCATTATaGGAGGCAAGTTCTCACTGCCTACTGAATCTCTATTTAGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: KFHCIPNAEPLNFAL*EASSHCLLNLYLVL Trigger: CAAAACTAAATAGAGATTCAGTAGGCAGTGAGAACTTGCCTCCAATAATGCAAAGTTTAGAGGTTCTGCATTTGGGATACAATGGAATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162159.8 ENSMUST00000220791.2 ENSMUST00000221360.2 |
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