Pregenerated sensors for LRRC8E (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046589Ensembl transcript IDs: ENSMUST00000053035.7, ENSMUST00000207770.2
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGCCTCCTGTTTCTCCTCCAGAAAAACCAGTCCCAGGATCTTGTCTaGGCTGCACAAAACCGACATGTCCTGCCTTCCTTCCACTCCTGC | + |
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Preference number: 1 (lower is better) Translates to: RLLFLLQKNQSQDLV*AAQNRHVLPSFHSC Trigger: GCAGGAGTGGAAGGAAGGCAGGACATGTCGGTTTTGTGCAGCTCAGACAAGATCCTGGGACTGGTTTTTCTGGAGGAGAAACAGGAGGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR CCA 90 bp | CTTCCTTCCACTCCTGCTGGACCTCTCTCCCTTGGAATACAATGTTaGGCAGAAACATGTAAAGGCCTCTGTGTCAGCCTGCCCCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: LPSTPAGPLSLGIQC*AETCKGLCVSLPLP Trigger: GGGAAGGGGCAGGCTGACACAGAGGCCTTTACATGTTTCTGCCCAACATTGTATTCCAAGGGAGAGAGGTCCAGCAGGAGTGGAAGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR GCA 90 bp | ACCAGTCCCAGGATCTTGTCTGAGCTGCACAAAACCGACATGTCCTaGCTTCCTTCCACTCCTGCTGGACCTCTCTCCCTTGGAATACAA | + |
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Preference number: 1 (lower is better) Translates to: TSPRILSELHKTDMS*LPSTPAGPLSLGIQ Trigger: TTGTATTCCAAGGGAGAGAGGTCCAGCAGGAGTGGAAGGAAGGCAGGACATGTCGGTTTTGTGCAGCTCAGACAAGATCCTGGGACTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR GCA 90 bp | CCTGTTTCTCCTCCAGAAAAACCAGTCCCAGGATCTTGTCTGAGCTaGACAAAACCGACATGTCCTGCCTTCCTTCCACTCCTGCTGGAC | + |
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Preference number: 1 (lower is better) Translates to: PVSPPEKPVPGSCLS*TKPTCPAFLPLLLD Trigger: GTCCAGCAGGAGTGGAAGGAAGGCAGGACATGTCGGTTTTGTGCAGCTCAGACAAGATCCTGGGACTGGTTTTTCTGGAGGAGAAACAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR TCA 90 bp | ACGGGACCCAGGGCTGCCTGCATGTCAAGCAAGCACTCTCACAACTaGGCTTCAGTGCCAGCCCAGTCTTTATGTCAATATTTCCATTAT | + |
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Preference number: 1 (lower is better) Translates to: TGPRAACMSSKHSHN*ASVPAQSLCQYFHY Trigger: ATAATGGAAATATTGACATAAAGACTGGGCTGGCACTGAAGCTCAGTTGTGAGAGTGCTTGCTTGACATGCAGGCAGCCCTGGGTCCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR CCA 90 bp | TCAGAGGAAGGGCAAGCCAGCCAGCCAAAGACACAGGTGTGGTTTTaGTTGAAGAACCTAAGACTGGTTAATCCTTCCCTAAGGGGTTAC | + |
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Preference number: 1 (lower is better) Translates to: SEEGQASQPKTQVWF*LKNLRLVNPSLRGY Trigger: GTAACCCCTTAGGGAAGGATTAACCAGTCTTAGGTTCTTCAACCAAAACCACACCTGTGTCTTTGGCTGGCTGGCTTGCCCTTCCTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR TCA 90 bp | GAATTAAAGGCGTGTGCCACCATGCTCAGCTACCCATCCAAATTCTaGGTCAGTATAATTTCAGGGGTGGGGTGGGAAGCATGTAAGGGT | + |
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Preference number: 1 (lower is better) Translates to: ELKACATMLSYPSKF*VSIISGVGWEACKG Trigger: ACCCTTACATGCTTCCCACCCCACCCCTGAAATTATACTGACTCAGAATTTGGATGGGTAGCTGAGCATGGTGGCACACGCCTTTAATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR GCA 90 bp | AAATCCACCTGCCTCTGCCTCCTGAGTGCTGGAATTAAAGGCGTGTaGCACCATGCTCAGCTACCCATCCAAATTCTGAGTCAGTATAAT | + |
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Preference number: 1 (lower is better) Translates to: KSTCLCLLSAGIKGV*HHAQLPIQILSQYN Trigger: ATTATACTGACTCAGAATTTGGATGGGTAGCTGAGCATGGTGGCACACGCCTTTAATTCCAGCACTCAGGAGGCAGAGGCAGGTGGATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR CCA 90 bp | GAATGTTCAGAGGAAGGGCAAGCCAGCCAGCCAAAGACACAGGTGTaGTTTTGGTTGAAGAACCTAAGACTGGTTAATCCTTCCCTAAGG | + |
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Preference number: 1 (lower is better) Translates to: ECSEEGQASQPKTQV*FWLKNLRLVNPSLR Trigger: CCTTAGGGAAGGATTAACCAGTCTTAGGTTCTTCAACCAAAACCACACCTGTGTCTTTGGCTGGCTGGCTTGCCCTTCCTCTGAACATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR GCA 90 bp | TCTAAGTACCCATCCCTGTCACAAAGGGCTTATAAAATCAGGACTTaGATGAAAGTTGGGATATGGAACTTTGGAACTGGACCCTGTATC | + |
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Preference number: 1 (lower is better) Translates to: SKYPSLSQRAYKIRT*MKVGIWNFGTGPCI Trigger: GATACAGGGTCCAGTTCCAAAGTTCCATATCCCAACTTTCATGCAAGTCCTGATTTTATAAGCCCTTTGTGACAGGGATGGGTACTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR TCA 90 bp | CCAGTCTTTATGTCAATATTTCCATTATGTGGTCTCAGGACCACCTaGATCAGAATTACCTGGCATTCTTACTTAGTAGCAGATTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: PVFMSIFPLCGLRTT*IRITWHSYLVADSW Trigger: CCAGGAATCTGCTACTAAGTAAGAATGCCAGGTAATTCTGATTCAGGTGGTCCTGAGACCACATAATGGAAATATTGACATAAAGACTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR-3UTR GCA 90 bp | GATTATGAAATGCTGAGGACGGGACCCAGGGCTGCCTGCATGTCAAGCAAGCACGCCTCTGTGTCAGCCTaGCCCTTCCCCCACCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: DYEMLRTGPRAACMSSKHASVSA*PFPHQA Trigger: AGCCTGGTGGGGGAAGGGGCAGGCTGACACAGAGGC...GTGCTTGCTTGACATGCAGGCAGCCCTGGGTCCCGTCCTCAGCATTTCATAATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR-3UTR GCA 90 bp | GAAGGGCAAGCCAGCCAGCCAAAGACACAGGTGTGGTTTTGGTTGAAGAACCTACCTTCCTTCCACTCCTaGTGGACCTCTCTCCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: EGQASQPKTQVWFWLKNLPSFHS*WTSLPW Trigger: CCAAGGGAGAGAGGTCCAGCAGGAGTGGAAGGAAGG...TAGGTTCTTCAACCAAAACCACACCTGTGTCTTTGGCTGGCTGGCTTGCCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR CAA 90 bp | CCGACATGTCCTGCCTTCCTTCCACTCCTGCTGGACCTCTCTCCCTaGGAATACAATGTTGGGCAGAAACATGTAAAGGCCTCTGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: PTCPAFLPLLLDLSP*EYNVGQKHVKASVS Trigger: TGACACAGAGGCCTTTACATGTTTCTGCCCAACATTGTATTCCAAGGGAGAGAGGTCCAGCAGGAGTGGAAGGAAGGCAGGACATGTCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR CAA 90 bp | TCTACCGCCTCCTGTTTCTCCTCCAGAAAAACCAGTCCCAGGATCTaGTCTGAGCTGCACAAAACCGACATGTCCTGCCTTCCTTCCACT | + |
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Preference number: 2 (lower is better) Translates to: STASCFSSRKTSPRI*SELHKTDMSCLPST Trigger: AGTGGAAGGAAGGCAGGACATGTCGGTTTTGTGCAGCTCAGACAAGATCCTGGGACTGGTTTTTCTGGAGGAGAAACAGGAGGCGGTAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR CAA 90 bp | GAGGAAGGGCAAGCCAGCCAGCCAAAGACACAGGTGTGGTTTTGGTaGAAGAACCTAAGACTGGTTAATCCTTCCCTAAGGGGTTACACC | + |
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Preference number: 2 (lower is better) Translates to: EEGQASQPKTQVWFW*KNLRLVNPSLRGYT Trigger: GGTGTAACCCCTTAGGGAAGGATTAACCAGTCTTAGGTTCTTCAACCAAAACCACACCTGTGTCTTTGGCTGGCTGGCTTGCCCTTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR-3UTR CCA 90 bp | AGTCCCAGGATCTTGTCTGAGCTGCACAAAACCGACATGTCCTGCCTTCCTTCCTGGACCTCTCTCCCTTaGAATACAATGTTGGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: SPRILSELHKTDMSCLPSWTSLP*NTMLGR Trigger: TCTGCCCAACATTGTATTCCAAGGGAGAGAGGTCCA...GGAAGGAAGGCAGGACATGTCGGTTTTGTGCAGCTCAGACAAGATCCTGGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR-3UTR CCA 90 bp | TTTGAGATGAGCTATGCTCCGTCTCCCAGGCTACCTCCAACCTTTCACGCCTCCTGGGATATGGAACTTTaGAACTGGACCCTGTATCCT | + |
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Preference number: 2 (lower is better) Translates to: FEMSYAPSPRLPPTFHASWDMEL*NWTLYP Trigger: AGGATACAGGGTCCAGTTCCAAAGTTCCATATCCCA...GGAGGCGTGAAAGGTTGGAGGTAGCCTGGGAGACGGAGCATAGCTCATCTCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR-3UTR CCA 90 bp | CAGAAATCCACCTGCCTCTGCCTCCTGAGTGCTGGAATTAAAGGCGTGTGCCACATGAAAGTTGGGATATaGAACTTTGGAACTGGACCC | + |
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Preference number: 2 (lower is better) Translates to: QKSTCLCLLSAGIKGVCHMKVGI*NFGTGP Trigger: GGGTCCAGTTCCAAAGTTCCATATCCCAACTTTCAT...GTGGCACACGCCTTTAATTCCAGCACTCAGGAGGCAGAGGCAGGTGGATTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR-3UTR GCA 90 bp | CAGCCAAAGACACAGGTGTGGTTTTGGTTGAAGAACCTAAGACTGGTTAATCCTAAAACCGACATGTCCTaGCTTCCTTCCACTCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: QPKTQVWFWLKNLRLVNPKTDMS*LPSTPA Trigger: AGCAGGAGTGGAAGGAAGGCAGGACATGTCGGTTTT...AGGATTAACCAGTCTTAGGTTCTTCAACCAAAACCACACCTGTGTCTTTGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR-3UTR CCA 90 bp | AGAGCCATTGTTCTAAGTACCCATCCCTGTCACAAAGGGCTTATAAAATCAGGATCCTTCCACTCCTGCTaGACCTCTCTCCCTTGGAAT | + |
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Preference number: 2 (lower is better) Translates to: RAIVLSTHPCHKGLIKSGSFHSC*TSLPWN Trigger: ATTCCAAGGGAGAGAGGTCCAGCAGGAGTGGAAGGA...TCCTGATTTTATAAGCCCTTTGTGACAGGGATGGGTACTTAGAACAATGGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR-3UTR TCA 90 bp | AGGTGGGAATGTGTGACAGGAGACTCGGCTTACAGTTTCTTCTTTATGTTCCATTACCCATCCAAATTCTaGGTCAGTATAATTTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: RWECVTGDSAYSFFFMFHYPSKF*VSIISG Trigger: CCCTGAAATTATACTGACTCAGAATTTGGATGGGTA...ATGGAACATAAAGAAGAAACTGTAAGCCGAGTCTCCTGTCACACATTCCCACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR-3UTR CCA 90 bp | GCTGATCCTTGTTGGGAAAGGTTGGAAATCCCACTCCCATATAGGAAACTAATTCCAAAGACACAGGTGTaGTTTTGGTTGAAGAACCTA | + |
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Preference number: 2 (lower is better) Translates to: ADPCWERLEIPLPYRKLIPKTQV*FWLKNL Trigger: TAGGTTCTTCAACCAAAACCACACCTGTGTCTTTGG...AATTAGTTTCCTATATGGGAGTGGGATTTCCAACCTTTCCCAACAAGGATCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR GCA 72 bp | GCACAAAACCGACATGTCCTGCCTTCCTTCCACTCCTaGTGGACCTCTCTCCCTTGGAATACAATGTTGGGC | + |
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Preference number: 3 (lower is better) Translates to: AQNRHVLPSFHS*WTSLPWNTMLG Trigger: GCCCAACATTGTATTCCAAGGGAGAGAGGTCCAGCAGGAGTGGAAGGAAGGCAGGACATGTCGGTTTTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR GCA 72 bp | AGGATCTTGTCTGAGCTGCACAAAACCGACATGTCCTaGCTTCCTTCCACTCCTGCTGGACCTCTCTCCCTT | + |
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Preference number: 3 (lower is better) Translates to: RILSELHKTDMS*LPSTPAGPLSL Trigger: AAGGGAGAGAGGTCCAGCAGGAGTGGAAGGAAGGCAGGACATGTCGGTTTTGTGCAGCTCAGACAAGATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR GCA 72 bp | CCTCCAGAAAAACCAGTCCCAGGATCTTGTCTGAGCTaGACAAAACCGACATGTCCTGCCTTCCTTCCACTC | + |
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Preference number: 3 (lower is better) Translates to: PPEKPVPGSCLS*TKPTCPAFLPL Trigger: GAGTGGAAGGAAGGCAGGACATGTCGGTTTTGTGCAGCTCAGACAAGATCCTGGGACTGGTTTTTCTGGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR GCA 72 bp | TGCCTCTGCCTCCTGAGTGCTGGAATTAAAGGCGTGTaGCACCATGCTCAGCTACCCATCCAAATTCTGAGT | + |
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Preference number: 3 (lower is better) Translates to: CLCLLSAGIKGV*HHAQLPIQILS Trigger: ACTCAGAATTTGGATGGGTAGCTGAGCATGGTGGCACACGCCTTTAATTCCAGCACTCAGGAGGCAGAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR-3UTR CAA 90 bp | CAGAAATCCACCTGCCTCTGCCTCCTGAGTGCTGGAATTAAAGGCGTGTGCCACCCTTGTTGGGAAAGGTaGGAAATCCCACTCCCATAT | + |
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Preference number: 3 (lower is better) Translates to: QKSTCLCLLSAGIKGVCHPCWER*EIPLPY Trigger: ATATGGGAGTGGGATTTCCAACCTTTCCCAACAAGG...GTGGCACACGCCTTTAATTCCAGCACTCAGGAGGCAGAGGCAGGTGGATTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR CCA 72 bp | ACTCCTGCTGGACCTCTCTCCCTTGGAATACAATGTTaGGCAGAAACATGTAAAGGCCTCTGTGTCAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: TPAGPLSLGIQC*AETCKGLCVSL Trigger: CAGGCTGACACAGAGGCCTTTACATGTTTCTGCCCAACATTGTATTCCAAGGGAGAGAGGTCCAGCAGGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR TCA 72 bp | AGGGCTGCCTGCATGTCAAGCAAGCACTCTCACAACTaGGCTTCAGTGCCAGCCCAGTCTTTATGTCAATAT | + |
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Preference number: 3 (lower is better) Translates to: RAACMSSKHSHN*ASVPAQSLCQY Trigger: ATATTGACATAAAGACTGGGCTGGCACTGAAGCTCAGTTGTGAGAGTGCTTGCTTGACATGCAGGCAGCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR TCA 72 bp | TCTCTACATTACATAGGTTCCACCACTCCTAGATTATaGAATGCTGAGGACGGGACCCAGGGCTGCCTGCAT | + |
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Preference number: 3 (lower is better) Translates to: SLHYIGSTTPRL*NAEDGTQGCLH Trigger: ATGCAGGCAGCCCTGGGTCCCGTCCTCAGCATTTCATAATCTAGGAGTGGTGGAACCTATGTAATGTAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR CCA 72 bp | GAGGAAGGGCAAGCCAGCCAGCCAAAGACACAGGTGTaGTTTTGGTTGAAGAACCTAAGACTGGTTAATCCT | + |
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Preference number: 3 (lower is better) Translates to: EEGQASQPKTQV*FWLKNLRLVNP Trigger: AGGATTAACCAGTCTTAGGTTCTTCAACCAAAACCACACCTGTGTCTTTGGCTGGCTGGCTTGCCCTTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR CCA 72 bp | AATCAGGACTTGCATGAAAGTTGGGATATGGAACTTTaGAACTGGACCCTGTATCCTCTCCTTAGGAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: NQDLHESWDMEL*NWTLYPLLRRE Trigger: TTCTCTCCTAAGGAGAGGATACAGGGTCCAGTTCCAAAGTTCCATATCCCAACTTTCATGCAAGTCCTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR CCA 72 bp | TGCCAGCCCAGTCTTTATGTCAATATTTCCATTATGTaGTCTCAGGACCACCTGAATCAGAATTACCTGGCA | + |
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Preference number: 3 (lower is better) Translates to: CQPSLYVNISIM*SQDHLNQNYLA Trigger: TGCCAGGTAATTCTGATTCAGGTGGTCCTGAGACCACATAATGGAAATATTGACATAAAGACTGGGCTGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR-3UTR CAA 90 bp | GCTGATCCTTGTTGGGAAAGGTTGGAAATCCCACTCCCATATAGGAAACTAATTGACACAGGTGTGGTTTaGGTTGAAGAACCTAAGACT | + |
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Preference number: 3 (lower is better) Translates to: ADPCWERLEIPLPYRKLIDTGVV*VEEPKT Trigger: AGTCTTAGGTTCTTCAACCAAAACCACACCTGTGTC...AATTAGTTTCCTATATGGGAGTGGGATTTCCAACCTTTCCCAACAAGGATCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR TCA 90 bp | GATTATGAAATGCTGAGGACGGGACCCAGGGCTGCCTGCATGTCAAGCAAGCACGCAGAGCCCCCAGGCTaGAGATTGCATGGGGGATAC | + |
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Preference number: 4 (lower is better) Translates to: DYEMLRTGPRAACMSSKHAEPPG*RLHGGY Trigger: GTATCCCCCATGCAATCTTCAGCCTGGGGGCTCTGC...GTGCTTGCTTGACATGCAGGCAGCCCTGGGTCCCGTCCTCAGCATTTCATAATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CCA 90 bp | CAGAAATCCACCTGCCTCTGCCTCCTGAGTGCTGGAATTAAAGGCGTGTGCCACACTGGCCCAGCTGGGTaGGCAGAGTCTCCAGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: QKSTCLCLLSAGIKGVCHTGPAG*AESPAC Trigger: ACAAGCTGGAGACTCTGCCCACCCAGCTGGGCCAGT...GTGGCACACGCCTTTAATTCCAGCACTCAGGAGGCAGAGGCAGGTGGATTTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR GCA 90 bp | CTCAAATCTACCGCCTCCTGTTTCTCCTCCAGAAAAACCAGTCCCAGGATCTTGGGCCTCCAGCCTGAGTaGCTCCACCTCGCTGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: LKSTASCFSSRKTSPRILGLQPE*LHLAEL Trigger: GAGCTCAGCGAGGTGGAGGCACTCAGGCTGGAGGCC...CAAGATCCTGGGACTGGTTTTTCTGGAGGAGAAACAGGAGGCGGTAGATTTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CCA 90 bp | GAAGGGCAAGCCAGCCAGCCAAAGACACAGGTGTGGTTTTGGTTGAAGAACCTAGGAGGCTCTCCAGGGTaGCACCCCGAGCCATTTCTG | + |
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Preference number: 4 (lower is better) Translates to: EGQASQPKTQVWFWLKNLGGSPG*HPEPFL Trigger: CAGAAATGGCTCGGGGTGCCACCCTGGAGAGCCTCC...TAGGTTCTTCAACCAAAACCACACCTGTGTCTTTGGCTGGCTGGCTTGCCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR TCA 90 bp | CTCAAATCTACCGCCTCCTGTTTCTCCTCCAGAAAAACCAGTCCCAGGATCTTGGGGCAGCCTGGCTGGTaGGTGAAGCAAGCTGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: LKSTASCFSSRKTSPRILGQPGW*VKQAEL Trigger: GAGCTCAGCTTGCTTCACTCACCAGCCAGGCTGCCC...CAAGATCCTGGGACTGGTTTTTCTGGAGGAGAAACAGGAGGCGGTAGATTTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CCA 90 bp | CAGAAATCCACCTGCCTCTGCCTCCTGAGTGCTGGAATTAAAGGCGTGTGCCACCGGACAAGGCCCGAGTaGTCCATGGAGAATCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: QKSTCLCLLSAGIKGVCHRTRPE*SMENQS Trigger: GCTTTGATTCTCCATGGACCACTCGGGCCTTGTCCG...GTGGCACACGCCTTTAATTCCAGCACTCAGGAGGCAGAGGCAGGTGGATTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CCA 90 bp | CAGAAATCCACCTGCCTCTGCCTCCTGAGTGCTGGAATTAAAGGCGTGTGCCACACCCCGAGCCATTTCTaGGGGAAAGAGTCCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: QKSTCLCLLSAGIKGVCHTPSHF*GKESFQ Trigger: CTGGAAGGACTCTTTCCCCCAGAAATGGCTCGGGGT...GTGGCACACGCCTTTAATTCCAGCACTCAGGAGGCAGAGGCAGGTGGATTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CCA 90 bp | TTTGAGATGAGCTATGCTCCGTCTCCCAGGCTACCTCCAACCTTTCACGCCTCCAGATGCTGGAGGCTCTaGAGAAGGCCCAACTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: FEMSYAPSPRLPPTFHASRCWRL*RRPNSG Trigger: ACCTGAGTTGGGCCTTCTCCAGAGCCTCCAGCATCT...GGAGGCGTGAAAGGTTGGAGGTAGCCTGGGAGACGGAGCATAGCTCATCTCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR TCA 90 bp | ACCGCCTCCTGTTTCTCCTCCAGAAAAACCAGTCCCAGGATCTTGTCTGAGCTGAACTGGCATACCCCGTaGTCTCTGATGTCTCCACCC | + |
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Preference number: 4 (lower is better) Translates to: TASCFSSRKTSPRILSELNWHTP*SLMSPP Trigger: GGGTGGAGACATCAGAGATCACGGGGTATGCCAGTT...CAGCTCAGACAAGATCCTGGGACTGGTTTTTCTGGAGGAGAAACAGGAGGCGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR TCA 90 bp | GATTATGAAATGCTGAGGACGGGACCCAGGGCTGCCTGCATGTCAAGCAAGCACACACTGCCAGCTTCTTaGGGCTGTTTAGGGCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: DYEMLRTGPRAACMSSKHTLPAS*GCLGQA Trigger: TGCTTGCCCTAAACAGCCTCAAGAAGCTGGCAGTGT...GTGCTTGCTTGACATGCAGGCAGCCCTGGGTCCCGTCCTCAGCATTTCATAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR GCA 90 bp | CAGAAATCCACCTGCCTCTGCCTCCTGAGTGCTGGAATTAAAGGCGTGTGCCACACCTTGAATGCAGGCTaGTGCTCTGTGAACTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: QKSTCLCLLSAGIKGVCHTLNAG*CSVNCL Trigger: CAAGCAGTTCACAGAGCAGCAGCCTGCATTCAAGGT...GTGGCACACGCCTTTAATTCCAGCACTCAGGAGGCAGAGGCAGGTGGATTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR GCA 90 bp | AGTCCCAGGATCTTGTCTGAGCTGCACAAAACCGACATGTCCTGCCTTCCTTCCTTACGCTGCAGCTTCTaGCTCAGCTTCTCAGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: SPRILSELHKTDMSCLPSLRCSF*LSFSGV Trigger: GACACCTGAGAAGCTGAGGCAGAAGCTGCAGCGTAA...GGAAGGAAGGCAGGACATGTCGGTTTTGTGCAGCTCAGACAAGATCCTGGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CCA 90 bp | TTTGAGATGAGCTATGCTCCGTCTCCCAGGCTACCTCCAACCTTTCACGCCTCCAGCTTAGAAAAGAGGTaGGCCTTGGTGTGGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FEMSYAPSPRLPPTFHASSLEKR*ALVWLQ Trigger: CTGCAACCACACCAAGGCCCACCTCTTTTCTAAGCT...GGAGGCGTGAAAGGTTGGAGGTAGCCTGGGAGACGGAGCATAGCTCATCTCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CCA 90 bp | GAAGGGCAAGCCAGCCAGCCAAAGACACAGGTGTGGTTTTGGTTGAAGAACCTAAGCTTCCGACAGTGCTaGAAGCTGAGGATCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: EGQASQPKTQVWFWLKNLSFRQC*KLRISS Trigger: CGAGGAGATCCTCAGCTTCCAGCACTGTCGGAAGCT...TAGGTTCTTCAACCAAAACCACACCTGTGTCTTTGGCTGGCTGGCTTGCCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR GCA 90 bp | ACCGCCTCCTGTTTCTCCTCCAGAAAAACCAGTCCCAGGATCTTGTCTGAGCTGTGGTTGAGGTTGAGTTaGTTAAGGCGGCTCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TASCFSSRKTSPRILSELWLRLS*LRRLSL Trigger: CAGTGAGAGCCGCCTTAAGCAACTCAACCTCAACCA...CAGCTCAGACAAGATCCTGGGACTGGTTTTTCTGGAGGAGAAACAGGAGGCGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR GCA 90 bp | CCTGCTGGACCTCTCTCCCTTGGAATACAATGTTGGGCAGAAACATGTAAAGGCACCAGCTTCCGACAGTaGTGGAAGCTGAGGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PAGPLSLGIQCWAETCKGTSFRQ*WKLRIS Trigger: GGAGATCCTCAGCTTCCAGCACTGTCGGAAGCTGGT...GCCTTTACATGTTTCTGCCCAACATTGTATTCCAAGGGAGAGAGGTCCAGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CCA 90 bp | GAAGGGCAAGCCAGCCAGCCAAAGACACAGGTGTGGTTTTGGTTGAAGAACCTACAGCAGAGTAACAACTaGAGGCTCAGACACCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: EGQASQPKTQVWFWLKNLQQSNN*RLRHHL Trigger: AAGGTGGTGTCTGAGCCTCCAGTTGTTACTCTGCTG...TAGGTTCTTCAACCAAAACCACACCTGTGTCTTTGGCTGGCTGGCTTGCCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR GCA 90 bp | GATTATGAAATGCTGAGGACGGGACCCAGGGCTGCCTGCATGTCAAGCAAGCACTTCAGAGAGGAAGACTaGAAAGCGTTTGGAATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DYEMLRTGPRAACMSSKHFREED*KAFGIE Trigger: CTCTATTCCAAACGCTTTGCAGTCTTCCTCTCTGAA...GTGCTTGCTTGACATGCAGGCAGCCCTGGGTCCCGTCCTCAGCATTTCATAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CCA 90 bp | CCTGCTGGACCTCTCTCCCTTGGAATACAATGTTGGGCAGAAACATGTAAAGGCAAAAGAGGTGGGCCTTaGTGTGGTTGCAGCAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PAGPLSLGIQCWAETCKGKRGGP*CGCSRN Trigger: GTTTCTGCTGCAACCACACCAAGGCCCACCTCTTTT...GCCTTTACATGTTTCTGCCCAACATTGTATTCCAAGGGAGAGAGGTCCAGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CCA 90 bp | ACCGCCTCCTGTTTCTCCTCCAGAAAAACCAGTCCCAGGATCTTGTCTGAGCTGTCGATAGACCGAAGGTaGTTGTCCTTAAGGTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TASCFSSRKTSPRILSELSIDRR*LSLRSS Trigger: ACTTGACCTTAAGGACAACCACCTTCGGTCTATCGA...CAGCTCAGACAAGATCCTGGGACTGGTTTTTCTGGAGGAGAAACAGGAGGCGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CCA 90 bp | AGGTGGGAATGTGTGACAGGAGACTCGGCTTACAGTTTCTTCTTTATGTTCCATAAGGCCCAACTCAGGTaGCAGGGAACGAAGCCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: RWECVTGDSAYSFFFMFHKAQLR*QGTKPV Trigger: AACGGGCTTCGTTCCCTGCCACCTGAGTTGGGCCTT...ATGGAACATAAAGAAGAAACTGTAAGCCGAGTCTCCTGTCACACATTCCCACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| 3UTR CAA 72 bp | TCCTGTTTCTCCTCCAGAAAAACCAGTCCCAGGATCTaGTCTGAGCTGCACAAAACCGACATGTCCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SCFSSRKTSPRI*SELHKTDMSCL Trigger: AAGGCAGGACATGTCGGTTTTGTGCAGCTCAGACAAGATCCTGGGACTGGTTTTTCTGGAGGAGAAACAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR TCA 90 bp | AGGTGGGAATGTGTGACAGGAGACTCGGCTTACAGTTTCTTCTTTATGTTCCATATACCCCGTGATCTCTaGTGTCTCCACCCTACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RWECVTGDSAYSFFFMFHIPRDL*CLHPTG Trigger: GCCTGTAGGGTGGAGACATCAGAGATCACGGGGTAT...ATGGAACATAAAGAAGAAACTGTAAGCCGAGTCTCCTGTCACACATTCCCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CCA 90 bp | AGGTGGGAATGTGTGACAGGAGACTCGGCTTACAGTTTCTTCTTTATGTTCCATCCACATCAGTCACACTaGCTGGCACCTTCCCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RWECVTGDSAYSFFFMFHPHQSH*LAPSLH Trigger: ATGCAGGGAAGGTGCCAGCCAGTGTGACTGATGTGG...ATGGAACATAAAGAAGAAACTGTAAGCCGAGTCTCCTGTCACACATTCCCACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR TCA 90 bp | AGAATTACCTGGCATTCTTACTTAGTAGCAGATTCCTGGCCCCACCCAATTTTTGAAGCTGGGCCCTTGTaGTTTTCTCCAGACACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RITWHSYLVADSWPHPIFEAGPL*FSPDTS Trigger: CGAGGTGTCTGGAGAAAATCACAAGGGCCCAGCTTC...AAAAATTGGGTGGGGCCAGGAATCTGCTACTAAGTAAGAATGCCAGGTAATTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR GCA 90 bp | AGAATTACCTGGCATTCTTACTTAGTAGCAGATTCCTGGCCCCACCCAATTTTTGGGCCTTGGTGTGGTTaGAGCAGAAACTGGCATACC | + |
|
Preference number: 4 (lower is better) Translates to: RITWHSYLVADSWPHPIFGPWCG*SRNWHT Trigger: GGTATGCCAGTTTCTGCTGCAACCACACCAAGGCCC...AAAAATTGGGTGGGGCCAGGAATCTGCTACTAAGTAAGAATGCCAGGTAATTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR GCA 90 bp | AGAGCCATTGTTCTAAGTACCCATCCCTGTCACAAAGGGCTTATAAAATCAGGACCACGCATGTTACGCTaGAGCTTCTGCCTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RAIVLSTHPCHKGLIKSGPRMLR*SFCLSF Trigger: GAAGCTGAGGCAGAAGCTGCAGCGTAACATGCGTGG...TCCTGATTTTATAAGCCCTTTGTGACAGGGATGGGTACTTAGAACAATGGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR GCA 90 bp | CAGCCAAAGACACAGGTGTGGTTTTGGTTGAAGAACCTAAGACTGGTTAATCCTTTAAGGTCAAGTTCCTaGAGAGCCCCCAGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QPKTQVWFWLKNLRLVNPLRSSS*RAPRLK Trigger: CTTCAGCCTGGGGGCTCTGCAGGAACTTGACCTTAA...AGGATTAACCAGTCTTAGGTTCTTCAACCAAAACCACACCTGTGTCTTTGGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CCA 90 bp | GCTGATCCTTGTTGGGAAAGGTTGGAAATCCCACTCCCATATAGGAAACTAATTAGGTGGGCCTTGGTGTaGTTGCAGCAGAAACTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ADPCWERLEIPLPYRKLIRWALV*LQQKLA Trigger: TGCCAGTTTCTGCTGCAACCACACCAAGGCCCACCT...AATTAGTTTCCTATATGGGAGTGGGATTTCCAACCTTTCCCAACAAGGATCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CCA 90 bp | AGGTGGGAATGTGTGACAGGAGACTCGGCTTACAGTTTCTTCTTTATGTTCCATATGAAAAGGGCAGCCTaGCTGGTGAGTGAAGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RWECVTGDSAYSFFFMFHMKRAA*LVSEAS Trigger: GCTTGCTTCACTCACCAGCCAGGCTGCCCTTTTCAT...ATGGAACATAAAGAAGAAACTGTAAGCCGAGTCTCCTGTCACACATTCCCACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CCA 90 bp | TACCCATCCCTGTCACAAAGGGCTTATAAAATCAGGACTTGCATGAAAGTTGGGATCAGTCACACTGGCTaGCACCTTCCCTGCATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YPSLSQRAYKIRTCMKVGISHTG*HLPCIA Trigger: AGCAATGCAGGGAAGGTGCCAGCCAGTGTGACTGAT...CCCAACTTTCATGCAAGTCCTGATTTTATAAGCCCTTTGTGACAGGGATGGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR GCA 90 bp | CAGGTGTGGTTTTGGTTGAAGAACCTAAGACTGGTTAATCCTTCCCTAAGGGGTCTTTTCCCGAACTTCTaGAGGCAGTCCCTCATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QVWFWLKNLRLVNPSLRGLFPNF*RQSLIK Trigger: CTTTATGAGGGACTGCCTGCAGAAGTTCGGGAAAAG...ACCCCTTAGGGAAGGATTAACCAGTCTTAGGTTCTTCAACCAAAACCACACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CCA 90 bp | CAGGTGTGGTTTTGGTTGAAGAACCTAAGACTGGTTAATCCTTCCCTAAGGGGTAACGTCCGCAGCTTGTaGCAGAAGAACAATTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: QVWFWLKNLRLVNPSLRGNVRSL*QKNNSS Trigger: CGATGAATTGTTCTTCTGCCACAAGCTGCGGACGTT...ACCCCTTAGGGAAGGATTAACCAGTCTTAGGTTCTTCAACCAAAACCACACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CCA 90 bp | CAGGTGTGGTTTTGGTTGAAGAACCTAAGACTGGTTAATCCTTCCCTAAGGGGTGTCACCAAGTTCTTCTaGCAGTGTCTCCAACCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QVWFWLKNLRLVNPSLRGVTKFF*QCLQPV Trigger: AACAGGTTGGAGACACTGCCAGAAGAACTTGGTGAC...ACCCCTTAGGGAAGGATTAACCAGTCTTAGGTTCTTCAACCAAAACCACACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR TCA 90 bp | TACCCATCCCTGTCACAAAGGGCTTATAAAATCAGGACTTGCATGAAAGTTGGGAGGCCACCAGAAAGCTaGTCTTCTCCACATAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: YPSLSQRAYKIRTCMKVGRPPES*SSPHRS Trigger: TGATCTATGTGGAGAAGATCAGCTTTCTGGTGGCCT...CCCAACTTTCATGCAAGTCCTGATTTTATAAGCCCTTTGTGACAGGGATGGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR TCA 90 bp | AGGTGGGAATGTGTGACAGGAGACTCGGCTTACAGTTTCTTCTTTATGTTCCATGTGTATACAGGCAGGTaGTGCCATAGACACACACAA | + |
|
Preference number: 4 (lower is better) Translates to: RWECVTGDSAYSFFFMFHVYTGR*CHRHTQ Trigger: TTGTGTGTGTCTATGGCATCACCTGCCTGTATACAC...ATGGAACATAAAGAAGAAACTGTAAGCCGAGTCTCCTGTCACACATTCCCACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR TCA 90 bp | AGAGCCATTGTTCTAAGTACCCATCCCTGTCACAAAGGGCTTATAAAATCAGGAGTGAGTGAAGCAAGCTaGGCTCCTGAAGGTTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: RAIVLSTHPCHKGLIKSGVSEAS*APEGSQ Trigger: TTGTGAACCTTCAGGAGCTCAGCTTGCTTCACTCAC...TCCTGATTTTATAAGCCCTTTGTGACAGGGATGGGTACTTAGAACAATGGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR GCA 90 bp | CAGCCAAAGACACAGGTGTGGTTTTGGTTGAAGAACCTAAGACTGGTTAATCCTTTGAATGCAGGCTGCTaGTCTGTGAACTGCTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QPKTQVWFWLKNLRLVNPLNAGC*SVNCLN Trigger: GTTCAAGCAGTTCACAGAGCAGCAGCCTGCATTCAA...AGGATTAACCAGTCTTAGGTTCTTCAACCAAAACCACACCTGTGTCTTTGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR GCA 90 bp | AGAATTACCTGGCATTCTTACTTAGTAGCAGATTCCTGGCCCCACCCAATTTTTGCACCTTCCCTGCATTaGTACGTAGAGACAGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: RITWHSYLVADSWPHPIFAPSLH*YVETVP Trigger: AGGTACTGTCTCTACGTAGCAATGCAGGGAAGGTGC...AAAAATTGGGTGGGGCCAGGAATCTGCTACTAAGTAAGAATGCCAGGTAATTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CCA 90 bp | AGGTGGGAATGTGTGACAGGAGACTCGGCTTACAGTTTCTTCTTTATGTTCCATTCTGCCGGATGTACATaGAATAGAGGATGTCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: RWECVTGDSAYSFFFMFHSAGCT*NRGCHP Trigger: AGGGTGACATCCTCTATTCCATGTACATCCGGCAGA...ATGGAACATAAAGAAGAAACTGTAAGCCGAGTCTCCTGTCACACATTCCCACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR TCA 90 bp | CAGCCAAAGACACAGGTGTGGTTTTGGTTGAAGAACCTAAGACTGGTTAATCCTAAAACTTACACACTTTaGGCACTGTCTGCCGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: QPKTQVWFWLKNLRLVNPKTYTL*ALSAGC Trigger: ACATCCGGCAGACAGTGCTCAAAGTGTGTAAGTTTT...AGGATTAACCAGTCTTAGGTTCTTCAACCAAAACCACACCTGTGTCTTTGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR GCA 90 bp | AGAGCCATTGTTCTAAGTACCCATCCCTGTCACAAAGGGCTTATAAAATCAGGAACTTCTTCAGCCCCTTaGAGTCACCAAGTTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RAIVLSTHPCHKGLIKSGTSSAP*SHQVLL Trigger: CAGAAGAACTTGGTGACTGCAAGGGGCTGAAGAAGT...TCCTGATTTTATAAGCCCTTTGTGACAGGGATGGGTACTTAGAACAATGGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CCA 90 bp | AGGTGGGAATGTGTGACAGGAGACTCGGCTTACAGTTTCTTCTTTATGTTCCATAGACTGCAAAGCGTTTaGAATAGAGGGAGTCGTACT | + |
|
Preference number: 4 (lower is better) Translates to: RWECVTGDSAYSFFFMFHRLQSV*NRGSRT Trigger: AGTACGACTCCCTCTATTCCAAACGCTTTGCAGTCT...ATGGAACATAAAGAAGAAACTGTAAGCCGAGTCTCCTGTCACACATTCCCACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS CCA 90 bp | TCTCCTTCTCACCTTCACCCACCTTCCCCGACCCTGCCCCTGTGGTaGTTACCGTGGTCACCATGGCCCGTCCAGAAGCTGGGCCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SPSHLHPPSPTLPLW*LPWSPWPVQKLGPC Trigger: ACAAGGGCCCAGCTTCTGGACGGGCCATGGTGACCACGGTAACCACCACAGGGGCAGGGTCGGGGAAGGTGGGTGAAGGTGAGAAGGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS CCA 90 bp | CTTTCTCCTTCTCACCTTCACCCACCTTCCCCGACCCTGCCCCTGTaGTGGTTACCGTGGTCACCATGGCCCGTCCAGAAGCTGGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSPSHLHPPSPTLPL*WLPWSPWPVQKLGP Trigger: AGGGCCCAGCTTCTGGACGGGCCATGGTGACCACGGTAACCACCACAGGGGCAGGGTCGGGGAAGGTGGGTGAAGGTGAGAAGGAGAAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS TCA 90 bp | GTGGTTACCGTGGTCACCATGGCCCGTCCAGAAGCTGGGCCCTTGTaGTTTTCTCCAGACACCTCGGACAAGGCCCGAGTGGTCCATGGA | + |
|
Preference number: 5 (lower is better) Translates to: VVTVVTMARPEAGPL*FSPDTSDKARVVHG Trigger: TCCATGGACCACTCGGGCCTTGTCCGAGGTGTCTGGAGAAAATCACAAGGGCCCAGCTTCTGGACGGGCCATGGTGACCACGGTAACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS GCA 90 bp | CAGAGGCTCAGCTCCAGCCGGCCACGCATGTTACGCTGCAGCTTCTaGCTCAGCTTCTCAGGTGTCCACTCATGGTTGAGGTTGAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: QRLSSSRPRMLRCSF*LSFSGVHSWLRLSC Trigger: GCAACTCAACCTCAACCATGAGTGGACACCTGAGAAGCTGAGGCAGAAGCTGCAGCGTAACATGCGTGGCCGGCTGGAGCTGAGCCTCTG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS CCA 90 bp | CAGCAGCCCCGACTTCTTCAGCCCCTTGCAGTCACCAAGTTCTTCTaGCAGTGTCTCCAACCTGTTACCCTTGAGCTCCAGACGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QQPRLLQPLAVTKFF*QCLQPVTLELQTAE Trigger: CTCAGCCGTCTGGAGCTCAAGGGTAACAGGTTGGAGACACTGCCAGAAGAACTTGGTGACTGCAAGGGGCTGAAGAAGTCGGGGCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS TCA 90 bp | AGATCTGTGATGAAAAGGGCAGCCTGGCTGGTGAGTGAAGCAAGCTaGGCTCCTGAAGGTTCACAAGCTGGGAGAGCCCAGGGGGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSVMKRAAWLVSEAS*APEGSQAGRAQGER Trigger: CCTTTCCCCCTGGGCTCTCCCAGCTTGTGAACCTTCAGGAGCTCAGCTTGCTTCACTCACCAGCCAGGCTGCCCTTTTCATCACAGATCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS TCA 90 bp | GGCCTTGGTGTGGTTGCAGCAGAAACTGGCATACCCCGTGATCTCTaGTGTCTCCACCCTACAGGCCACCAGAAAGCTGATCTTCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GLGVVAAETGIPRDL*CLHPTGHQKADLLH Trigger: GTGGAGAAGATCAGCTTTCTGGTGGCCTGTAGGGTGGAGACATCAGAGATCACGGGGTATGCCAGTTTCTGCTGCAACCACACCAAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS GCA 90 bp | CATAAAGGGTGTCCTCCACCAGCAGCCCCGACTTCTTCAGCCCCTTaGAGTCACCAAGTTCTTCTGGCAGTGTCTCCAACCTGTTACCCT | + |
|
Preference number: 5 (lower is better) Translates to: HKGCPPPAAPTSSAP*SHQVLLAVSPTCYP Trigger: AGGGTAACAGGTTGGAGACACTGCCAGAAGAACTTGGTGACTGCAAGGGGCTGAAGAAGTCGGGGCTGCTGGTGGAGGACACCCTTTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CAA 90 bp | GATTATGAAATGCTGAGGACGGGACCCAGGGCTGCCTGCATGTCAAGCAAGCACGGCAAGCAGATGATCTaGTCCTGTGTCACCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: DYEMLRTGPRAACMSSKHGKQMI*SCVTWR Trigger: CCTCCAGGTGACACAGGACAAGATCATCTGCTTGCC...GTGCTTGCTTGACATGCAGGCAGCCCTGGGTCCCGTCCTCAGCATTTCATAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CAA 90 bp | TTTGAGATGAGCTATGCTCCGTCTCCCAGGCTACCTCCAACCTTTCACGCCTCCTGGGCCTTGGTGTGGTaGCAGCAGAAACTGGCATAC | + |
|
Preference number: 5 (lower is better) Translates to: FEMSYAPSPRLPPTFHASWALVW*QQKLAY Trigger: GTATGCCAGTTTCTGCTGCAACCACACCAAGGCCCA...GGAGGCGTGAAAGGTTGGAGGTAGCCTGGGAGACGGAGCATAGCTCATCTCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS CCA 90 bp | AAAAGCTGCTGGCATGGAGCCCCCGATATGTTCTCACGAGATTCGTaGCTAGGCAAGCAGATGATCTTGTCCTGTGTCACCTGGAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KSCWHGAPDMFSRDS*LGKQMILSCVTWRV Trigger: CACCCTCCAGGTGACACAGGACAAGATCATCTGCTTGCCTAGCCACGAATCTCGTGAGAACATATCGGGGGCTCCATGCCAGCAGCTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CAA 90 bp | CAGAAATCCACCTGCCTCTGCCTCCTGAGTGCTGGAATTAAAGGCGTGTGCCACTGCTGGAGGTCTAGGTaGTTTTTGAGGCCACTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QKSTCLCLLSAGIKGVCHCWRSR*FLRPLS Trigger: GCTCAGTGGCCTCAAAAACAACCTAGACCTCCAGCA...GTGGCACACGCCTTTAATTCCAGCACTCAGGAGGCAGAGGCAGGTGGATTTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CAA 90 bp | GAAGGGCAAGCCAGCCAGCCAAAGACACAGGTGTGGTTTTGGTTGAAGAACCTACAGGGTTTGAGCACCTaGAATGCAGGCTGCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: EGQASQPKTQVWFWLKNLQGLST*NAGCCS Trigger: AGAGCAGCAGCCTGCATTCAAGGTGCTCAAACCCTG...TAGGTTCTTCAACCAAAACCACACCTGTGTCTTTGGCTGGCTGGCTTGCCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CAA 90 bp | CTCAAATCTACCGCCTCCTGTTTCTCCTCCAGAAAAACCAGTCCCAGGATCTTGACATCCCACCAGGGTTaGAGCACCTTGAATGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LKSTASCFSSRKTSPRILTSHQG*STLNAG Trigger: GCCTGCATTCAAGGTGCTCAAACCCTGGTGGGATGT...CAAGATCCTGGGACTGGTTTTTCTGGAGGAGAAACAGGAGGCGGTAGATTTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS GCA 90 bp | TTCTGCCTCAGCTTCTCAGGTGTCCACTCATGGTTGAGGTTGAGTTaGTTAAGGCGGCTCTCACTGACTTCAGAGAGGAAGACTGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: FCLSFSGVHSWLRLS*LRRLSLTSERKTAK Trigger: CTTTGCAGTCTTCCTCTCTGAAGTCAGTGAGAGCCGCCTTAAGCAACTCAACCTCAACCATGAGTGGACACCTGAGAAGCTGAGGCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CAA 90 bp | CAGAAATCCACCTGCCTCTGCCTCCTGAGTGCTGGAATTAAAGGCGTGTGCCACAAAAACTTACACACTTaGAGCACTGTCTGCCGGATG | + |
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Preference number: 5 (lower is better) Translates to: QKSTCLCLLSAGIKGVCHKNLHT*STVCRM Trigger: CATCCGGCAGACAGTGCTCAAAGTGTGTAAGTTTTT...GTGGCACACGCCTTTAATTCCAGCACTCAGGAGGCAGAGGCAGGTGGATTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CAA 90 bp | CCTGCTGGACCTCTCTCCCTTGGAATACAATGTTGGGCAGAAACATGTAAAGGCCACTCATGGTTGAGGTaGAGTTGCTTAAGGCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: PAGPLSLGIQCWAETCKGHSWLR*SCLRRL Trigger: GAGCCGCCTTAAGCAACTCAACCTCAACCATGAGTG...GCCTTTACATGTTTCTGCCCAACATTGTATTCCAAGGGAGAGAGGTCCAGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CAA 90 bp | AGTCCCAGGATCTTGTCTGAGCTGCACAAAACCGACATGTCCTGCCTTCCTTCCAGTAACGTCCGCAGCTaGTGGCAGAAGAACAATTCA | + |
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Preference number: 5 (lower is better) Translates to: SPRILSELHKTDMSCLPSSNVRS*WQKNNS Trigger: TGAATTGTTCTTCTGCCACAAGCTGCGGACGTTACT...GGAAGGAAGGCAGGACATGTCGGTTTTGTGCAGCTCAGACAAGATCCTGGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CAA 90 bp | CCTGCTGGACCTCTCTCCCTTGGAATACAATGTTGGGCAGAAACATGTAAAGGCGGTGTCCACTCATGGTaGAGGTTGAGTTGCTTAAGG | + |
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Preference number: 5 (lower is better) Translates to: PAGPLSLGIQCWAETCKGGVHSW*RLSCLR Trigger: CCTTAAGCAACTCAACCTCAACCATGAGTGGACACC...GCCTTTACATGTTTCTGCCCAACATTGTATTCCAAGGGAGAGAGGTCCAGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CAA 90 bp | GCTGATCCTTGTTGGGAAAGGTTGGAAATCCCACTCCCATATAGGAAACTAATTTCCAACCTGTTACCCTaGAGCTCCAGACGGCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: ADPCWERLEIPLPYRKLISNLLP*SSRRLR Trigger: CCTCAGCCGTCTGGAGCTCAAGGGTAACAGGTTGGA...AATTAGTTTCCTATATGGGAGTGGGATTTCCAACCTTTCCCAACAAGGATCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CAA 90 bp | TACCCATCCCTGTCACAAAGGGCTTATAAAATCAGGACTTGCATGAAAGTTGGGCTGCTCAGAGATTCCTaGAGGCAAAAGCTGCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: YPSLSQRAYKIRTCMKVGLLRDS*RQKLLA Trigger: TGCCAGCAGCTTTTGCCTCAAGGAATCTCTGAGCAG...CCCAACTTTCATGCAAGTCCTGATTTTATAAGCCCTTTGTGACAGGGATGGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CAA 90 bp | AGAGCCATTGTTCTAAGTACCCATCCCTGTCACAAAGGGCTTATAAAATCAGGAGAAAAGAGGTGGGCCTaGGTGTGGTTGCAGCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: RAIVLSTHPCHKGLIKSGEKRWA*VWLQQK Trigger: TTTCTGCTGCAACCACACCAAGGCCCACCTCTTTTC...TCCTGATTTTATAAGCCCTTTGTGACAGGGATGGGTACTTAGAACAATGGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CAA 90 bp | AGAGCCATTGTTCTAAGTACCCATCCCTGTCACAAAGGGCTTATAAAATCAGGAATAGACCGAAGGTGGTaGTCCTTAAGGTCAAGTTCC | + |
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Preference number: 5 (lower is better) Translates to: RAIVLSTHPCHKGLIKSGIDRRW*SLRSSS Trigger: GGAACTTGACCTTAAGGACAACCACCTTCGGTCTAT...TCCTGATTTTATAAGCCCTTTGTGACAGGGATGGGTACTTAGAACAATGGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS-3UTR CAA 90 bp | AGAGCCATTGTTCTAAGTACCCATCCCTGTCACAAAGGGCTTATAAAATCAGGAATGAAGTGTTCTATTTaGGAGCTGGTACCAGGGAAT | + |
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Preference number: 5 (lower is better) Translates to: RAIVLSTHPCHKGLIKSGMKCSI*ELVPGN Trigger: ATTCCCTGGTACCAGCTCCAAAATAGAACACTTCAT...TCCTGATTTTATAAGCCCTTTGTGACAGGGATGGGTACTTAGAACAATGGCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS CCA 72 bp | CCACCTTCCCCGACCCTGCCCCTGTGGTGGTTACCGTaGTCACCATGGCCCGTCCAGAAGCTGGGCCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: PPSPTLPLWWLP*SPWPVQKLGPC Trigger: ACAAGGGCCCAGCTTCTGGACGGGCCATGGTGACCACGGTAACCACCACAGGGGCAGGGTCGGGGAAGGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS GCA 72 bp | TTTCTCCTTCTCACCTTCACCCACCTTCCCCGACCCTaGCCCTGTGGTGGTTACCGTGGTCACCATGGCCCG | + |
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Preference number: 6 (lower is better) Translates to: FLLLTFTHLPRP*PCGGYRGHHGP Trigger: CGGGCCATGGTGACCACGGTAACCACCACAGGGGCAGGGTCGGGGAAGGTGGGTGAAGGTGAGAAGGAGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS CCA 72 bp | AGGCCCAACTCAGGTGGCAGGGAACGAAGCCCGTTGTaGGATAAATCCAGCAGGCGGAGGCCAAAGCACTGG | + |
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Preference number: 6 (lower is better) Translates to: RPNSGGRERSPL*DKSSRRRPKHW Trigger: CCAGTGCTTTGGCCTCCGCCTGCTGGATTTATCCCACAACGGGCTTCGTTCCCTGCCACCTGAGTTGGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS CAA 72 bp | CCAAGTTCTTCTGGCAGTGTCTCCAACCTGTTACCCTaGAGCTCCAGACGGCTGAGGGCCTGGAGGGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: PSSSGSVSNLLP*SSRRLRAWRAA Trigger: GGCTGCCCTCCAGGCCCTCAGCCGTCTGGAGCTCAAGGGTAACAGGTTGGAGACACTGCCAGAAGAACTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS GCA 72 bp | AGCTCCAGCCGGCCACGCATGTTACGCTGCAGCTTCTaGCTCAGCTTCTCAGGTGTCCACTCATGGTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: SSSRPRMLRCSF*LSFSGVHSWLR Trigger: CCTCAACCATGAGTGGACACCTGAGAAGCTGAGGCAGAAGCTGCAGCGTAACATGCGTGGCCGGCTGGAGCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS CAA 72 bp | AGAAGGCCCAACTCAGGTGGCAGGGAACGAAGCCCGTaGTGGGATAAATCCAGCAGGCGGAGGCCAAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: RRPNSGGRERSP*WDKSSRRRPKH Trigger: GTGCTTTGGCCTCCGCCTGCTGGATTTATCCCACAACGGGCTTCGTTCCCTGCCACCTGAGTTGGGCCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS CAA 90 bp | AGGTGCCCGGCCACATCAGTCACACTGGCTGGCACCTTCCCTGCATaGCTACGTAGAGACAGTACCTTGAGCTGTTTAAGCTCCCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RCPATSVTLAGTFPA*LRRDSTLSCLSSRR Trigger: CCTCCGGGAGCTTAAACAGCTCAAGGTACTGTCTCTACGTAGCAATGCAGGGAAGGTGCCAGCCAGTGTGACTGATGTGGCCGGGCACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS TCA 72 bp | TTAGGGCAAGCAAACGAGCCCCATCATTGTGCAGGCTaGGTCGCTGAAGGTGCCCGGCCACATCAGTCACAC | + |
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Preference number: 6 (lower is better) Translates to: LGQANEPHHCAG*VAEGARPHQSH Trigger: GTGTGACTGATGTGGCCGGGCACCTTCAGCGACTCAGCCTGCACAATGATGGGGCTCGTTTGCTTGCCCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS TCA 72 bp | ATGAAAAGGGCAGCCTGGCTGGTGAGTGAAGCAAGCTaGGCTCCTGAAGGTTCACAAGCTGGGAGAGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: MKRAAWLVSEAS*APEGSQAGRAQ Trigger: CTGGGCTCTCCCAGCTTGTGAACCTTCAGGAGCTCAGCTTGCTTCACTCACCAGCCAGGCTGCCCTTTTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS TCA 72 bp | CCACCAGCTCCAGCTCCCGTAACACTGCCAGCTTCTTaGGGCTGTTTAGGGCAAGCAAACGAGCCCCATCAT | + |
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Preference number: 6 (lower is better) Translates to: PPAPAPVTLPAS*GCLGQANEPHH Trigger: ATGATGGGGCTCGTTTGCTTGCCCTAAACAGCCTCAAGAAGCTGGCAGTGTTACGGGAGCTGGAGCTGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS GCA 72 bp | TCCCACCAGGGTTTGAGCACCTTGAATGCAGGCTGCTaGTCTGTGAACTGCTTGAACTCCGCCACTGGGATC | + |
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Preference number: 6 (lower is better) Translates to: SHQGLSTLNAGC*SVNCLNSATGI Trigger: GATCCCAGTGGCGGAGTTCAAGCAGTTCACAGAGCAGCAGCCTGCATTCAAGGTGCTCAAACCCTGGTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053035.7 ENSMUST00000207770.2 |
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| CDS GCA 72 bp | CCCCGAGCCATTTCTGGGGGAAAGAGTCCTTCCAGGTaGAGTTCTTCTAAGCCTCGAAGCCCAAACACCCAG | + |
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Preference number: 6 (lower is better) Translates to: PRAISGGKSPSR*SSSKPRSPNTQ Trigger: CTGGGTGTTTGGGCTTCGAGGCTTAGAAGAACTGCACCTGGAAGGACTCTTTCCCCCAGAAATGGCTCGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS GCA 72 bp | TTGTGCCACAGCCTGAGAGTGACCAGCTTCCGACAGTaGTGGAAGCTGAGGATCTCCTCGATAGACCGAAGG | + |
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Preference number: 6 (lower is better) Translates to: LCHSLRVTSFRQ*WKLRISSIDRR Trigger: CCTTCGGTCTATCGAGGAGATCCTCAGCTTCCAGCACTGTCGGAAGCTGGTCACTCTCAGGCTGTGGCACAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS CAA 72 bp | GGCACCTTCCCTGCATTGCTACGTAGAGACAGTACCTaGAGCTGTTTAAGCTCCCGGAGGCTCTCCAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: GTFPALLRRDST*SCLSSRRLSRV Trigger: CACCCTGGAGAGCCTCCGGGAGCTTAAACAGCTCAAGGTACTGTCTCTACGTAGCAATGCAGGGAAGGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS CAA 72 bp | AGGATGTCACCCTCTTCCACGTGCACTCGGAACTTTTaGACCTTCTCGAATAGGGCCTTCGCTTGCTCGCCC | + |
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Preference number: 6 (lower is better) Translates to: RMSPSSTCTRNF*TFSNRAFACSP Trigger: GGGCGAGCAAGCGAAGGCCCTATTCGAGAAGGTCAAAAAGTTCCGAGTGCACGTGGAAGAGGGTGACATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS TCA 72 bp | GTGGTTGCAGCAGAAACTGGCATACCCCGTGATCTCTaGTGTCTCCACCCTACAGGCCACCAGAAAGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: VVAAETGIPRDL*CLHPTGHQKAD Trigger: ATCAGCTTTCTGGTGGCCTGTAGGGTGGAGACATCAGAGATCACGGGGTATGCCAGTTTCTGCTGCAACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS CCA 72 bp | TGGCATGGAGCCCCCGATATGTTCTCACGAGATTCGTaGCTAGGCAAGCAGATGATCTTGTCCTGTGTCACC | + |
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Preference number: 6 (lower is better) Translates to: WHGAPDMFSRDS*LGKQMILSCVT Trigger: GGTGACACAGGACAAGATCATCTGCTTGCCTAGCCACGAATCTCGTGAGAACATATCGGGGGCTCCATGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS CCA 72 bp | CTGCTCAGAGATTCCTTGAGGCAAAAGCTGCTGGCATaGAGCCCCCGATATGTTCTCACGAGATTCGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: LLRDSLRQKLLA*SPRYVLTRFVA Trigger: AGCCACGAATCTCGTGAGAACATATCGGGGGCTCCATGCCAGCAGCTTTTGCCTCAAGGAATCTCTGAGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS CCA 72 bp | CAGAAGGCCAGCTTAGAAAAGAGGTGGGCCTTGGTGTaGTTGCAGCAGAAACTGGCATACCCCGTGATCTCT | + |
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Preference number: 6 (lower is better) Translates to: QKASLEKRWALV*LQQKLAYPVIS Trigger: AGAGATCACGGGGTATGCCAGTTTCTGCTGCAACCACACCAAGGCCCACCTCTTTTCTAAGCTGGCCTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS CAA 72 bp | TTCTCACGAGATTCGTGGCTAGGCAAGCAGATGATCTaGTCCTGTGTCACCTGGAGGGTGCACCCGAATACC | + |
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Preference number: 6 (lower is better) Translates to: FSRDSWLGKQMI*SCVTWRVHPNT Trigger: GGTATTCGGGTGCACCCTCCAGGTGACACAGGACAAGATCATCTGCTTGCCTAGCCACGAATCTCGTGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053035.7 ENSMUST00000207770.2 |
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| CDS CCA 72 bp | TTGCTCGCCCTCCTTCTTATCCAGCAGAGTAACAACTaGAGGCTCAGACACCACCTTTTCGGGCTCAATGAG | + |
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Preference number: 6 (lower is better) Translates to: LLALLLIQQSNN*RLRHHLFGLNE Trigger: CTCATTGAGCCCGAAAAGGTGGTGTCTGAGCCTCCAGTTGTTACTCTGCTGGATAAGAAGGAGGGCGAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS CAA 72 bp | AAGGCCAGCTTAGAAAAGAGGTGGGCCTTGGTGTGGTaGCAGCAGAAACTGGCATACCCCGTGATCTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: KASLEKRWALVW*QQKLAYPVISD Trigger: ATCAGAGATCACGGGGTATGCCAGTTTCTGCTGCAACCACACCAAGGCCCACCTCTTTTCTAAGCTGGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS CAA 72 bp | TGCCTCAGCTTCTCAGGTGTCCACTCATGGTTGAGGTaGAGTTGCTTAAGGCGGCTCTCACTGACTTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: CLSFSGVHSWLR*SCLRRLSLTSE Trigger: CTCTGAAGTCAGTGAGAGCCGCCTTAAGCAACTCAACCTCAACCATGAGTGGACACCTGAGAAGCTGAGGCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS CAA 72 bp | AGCTTCTGCCTCAGCTTCTCAGGTGTCCACTCATGGTaGAGGTTGAGTTGCTTAAGGCGGCTCTCACTGACT | + |
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Preference number: 6 (lower is better) Translates to: SFCLSFSGVHSW*RLSCLRRLSLT Trigger: AGTCAGTGAGAGCCGCCTTAAGCAACTCAACCTCAACCATGAGTGGACACCTGAGAAGCTGAGGCAGAAGCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS CAA 90 bp | CTTCTGCCTCAGCTTCTCAGGTGTCCACTCATGGTTGAGGTTGAGTaGCTTAAGGCGGCTCTCACTGACTTCAGAGAGGAAGACTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: LLPQLLRCPLMVEVE*LKAALTDFREEDCK Trigger: TTTGCAGTCTTCCTCTCTGAAGTCAGTGAGAGCCGCCTTAAGCAACTCAACCTCAACCATGAGTGGACACCTGAGAAGCTGAGGCAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS GCA 72 bp | AGCTTCTCAGGTGTCCACTCATGGTTGAGGTTGAGTTaGTTAAGGCGGCTCTCACTGACTTCAGAGAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SFSGVHSWLRLS*LRRLSLTSERK Trigger: CTTCCTCTCTGAAGTCAGTGAGAGCCGCCTTAAGCAACTCAACCTCAACCATGAGTGGACACCTGAGAAGCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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| CDS CAA 72 bp | CAGCTTCTCAGGTGTCCACTCATGGTTGAGGTTGAGTaGCTTAAGGCGGCTCTCACTGACTTCAGAGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: QLLRCPLMVEVE*LKAALTDFREE Trigger: TTCCTCTCTGAAGTCAGTGAGAGCCGCCTTAAGCAACTCAACCTCAACCATGAGTGGACACCTGAGAAGCTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053035.7 |
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