Pregenerated sensors for LRRC8C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054720Ensembl transcript IDs: ENSMUST00000067924.13, ENSMUST00000153754.2
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCTTCCACTGTGTGGATCCTGAAGAGCAAGCTCAGGACCTCAGGTaGATGGCAAGTGCCATTCACCCTCAGGGCCACCTTGCTGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: SFHCVDPEEQAQDLR*MASAIHPQGHLAGP Trigger: GGGACCAGCAAGGTGGCCCTGAGGGTGAATGGCACTTGCCATCCACCTGAGGTCCTGAGCTTGCTCTTCAGGATCCACACAGTGGAAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR TCA 90 bp | AGAGCTGAGAGTTCCCGTGCTTGCTGCACTGACATCCGCCCGCACTaGGGGCAGGCTTGCGGGAAGCTGATGACTACGCTTATGTACACA | + |
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Preference number: 1 (lower is better) Translates to: RAESSRACCTDIRPH*GQACGKLMTTLMYT Trigger: TGTGTACATAAGCGTAGTCATCAGCTTCCCGCAAGCCTGCCCTCAGTGCGGGCGGATGTCAGTGCAGCAAGCACGGGAACTCTCAGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR CCA 90 bp | AGGTGCTCACTCTGTGGCACCCTTCAGAGGACAACTGACGGGAGTTaGTTCTCTCCTTCCACTGTGTGGATCCTGAAGAGCAAGCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: RCSLCGTLQRTTDGS*FSPSTVWILKSKLR Trigger: CCTGAGCTTGCTCTTCAGGATCCACACAGTGGAAGGAGAGAACCAACTCCCGTCAGTTGTCCTCTGAAGGGTGCCACAGAGTGAGCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR CCA 90 bp | GAGTCTGGAGTTTCCTATAGAGTGGCACCTCCTGACCAGCCAAGGTaGCGGCTGACAGTAAAACCACTGGCACAACTTCTTGGTACATAT | + |
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Preference number: 1 (lower is better) Translates to: ESGVSYRVAPPDQPR*RLTVKPLAQLLGTY Trigger: ATATGTACCAAGAAGTTGTGCCAGTGGTTTTACTGTCAGCCGCCACCTTGGCTGGTCAGGAGGTGCCACTCTATAGGAAACTCCAGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR CCA 90 bp | GAGTTGGAGGTTGGACAGAGAGCTGATCCTCCCAGCAAGAGCACTTaGAAAACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: ELEVGQRADPPSKST*KTERERERERERER Trigger: TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTTTCCAAGTGCTCTTGCTGGGAGGATCAGCTCTCTGTCCAACCTCCAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR GCA 90 bp | AACCTCCCTGAGGCAGGGACATTTCCAAAAGAGCCTGAAAAAGTCTaGTTGCTGCTTAGGACACCACGGAGACTGTCAGAGCTCATTGTA | + |
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Preference number: 1 (lower is better) Translates to: NLPEAGTFPKEPEKV*LLLRTPRRLSELIV Trigger: TACAATGAGCTCTGACAGTCTCCGTGGTGTCCTAAGCAGCAAGCAGACTTTTTCAGGCTCTTTTGGAAATGTCCCTGCCTCAGGGAGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR CCA 90 bp | AGAATGCCATCTTTATTAGTGGGCGACTTTGGGAAGGGGACTGGATaGGAGCAGATACTTGTGTGGGAGGCTGATATCAGAAGACTGAGA | + |
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Preference number: 1 (lower is better) Translates to: RMPSLLVGDFGKGTG*EQILVWEADIRRLR Trigger: TCTCAGTCTTCTGATATCAGCCTCCCACACAAGTATCTGCTCCCATCCAGTCCCCTTCCCAAAGTCGCCCACTAATAAAGATGGCATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR CCA 90 bp | AGGTTTAAAGAAATCATGACTGAAATAGAAGCACTTGCACGGGGCTaGCCCTTCACACAGAGTGATGAGTCCTGTTCCCTTGTCTGTTTT | + |
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Preference number: 1 (lower is better) Translates to: RFKEIMTEIEALARG*PFTQSDESCSLVCF Trigger: AAAACAGACAAGGGAACAGGACTCATCACTCTGTGTGAAGGGCCAGCCCCGTGCAAGTGCTTCTATTTCAGTCATGATTTCTTTAAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR TCA 90 bp | GTGGTTCAGGCACCCGAGTTTCCCGTTGGAAGGCTGGACAGTAGCTaGAAGCATTTTACTCAAGAACGAGAACAAAAACTTACTGTATTA | + |
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Preference number: 1 (lower is better) Translates to: VVQAPEFPVGRLDSS*KHFTQEREQKLTVL Trigger: TAATACAGTAAGTTTTTGTTCTCGTTCTTGAGTAAAATGCTTTCAGCTACTGTCCAGCCTTCCAACGGGAAACTCGGGTGCCTGAACCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR GCA 90 bp | CTAGGTAAGACTGGGACTTCTTACCATGTCTCTAAACAGAAAAGGTaGAAACATCCCATCGACTCTTCTAGAAGTTTCCTCAGTGGTAGC | + |
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Preference number: 1 (lower is better) Translates to: LGKTGTSYHVSKQKR*KHPIDSSRSFLSGS Trigger: GCTACCACTGAGGAAACTTCTAGAAGAGTCGATGGGATGTTTGCACCTTTTCTGTTTAGAGACATGGTAAGAAGTCCCAGTCTTACCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR TCA 90 bp | TCCTATACACCACACAGCGAGATAACACTAAGACGTTTCCTTTCATaGACATGTATTCTGACAAATCAACGATCAGTCCTTTTTCTCGGC | + |
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Preference number: 1 (lower is better) Translates to: SYTPHSEITLRRFLS*TCILTNQRSVLFLG Trigger: GCCGAGAAAAAGGACTGATCGTTGATTTGTCAGAATACATGTTCATGAAAGGAAACGTCTTAGTGTTATCTCGCTGTGTGGTGTATAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR GCA 90 bp | GGTGCATTCAATGGTTCAATTTACATTCCAACAACAAGTTACTCTTaGTCAATAACAGACAATCTGCCTTTAAGTTCTTTAAGGCAGAGC | + |
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Preference number: 1 (lower is better) Translates to: GAFNGSIYIPTTSYS*SITDNLPLSSLRQS Trigger: GCTCTGCCTTAAAGAACTTAAAGGCAGATTGTCTGTTATTGAGCAAGAGTAACTTGTTGTTGGAATGTAAATTGAACCATTGAATGCACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR-3UTR TCA 90 bp | TGTTGTGAGTTGGAGGTTGGACAGAGAGCTGATCCTCCCAGCAAGAGCACTTGGTCTCTGCACAGGGTCTaGGGAAGGGGCGGGGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: CCELEVGQRADPPSKSTWSLHRV*GRGGAC Trigger: GCAGGCCCCGCCCCTTCCTCAGACCCTGTGCAGAGA...CCAAGTGCTCTTGCTGGGAGGATCAGCTCTCTGTCCAACCTCCAACTCACAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTCCTTCCACTGTGTGGATCCTGAAGAGCAAGCTCAGGACCTCAGGTGGAGGTTGGACAGAGAGCTaGTCCTCCCAGCAAGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: FSPSTVWILKSKLRTSGGGWTES*SSQQEH Trigger: GTGCTCTTGCTGGGAGGATCAGCTCTCTGTCCAACC...TCCACCTGAGGTCCTGAGCTTGCTCTTCAGGATCCACACAGTGGAAGGAGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR-3UTR GCA 90 bp | CGGAGACTGTCAGAGCTCATTGTAGCAGCAAGGAAGGGCTGGGTGGGCAATTCGGCAACCACAGGGGGTTaGTTTCTTCACCCACTTCAA | + |
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Preference number: 2 (lower is better) Translates to: RRLSELIVAARKGWVGNSATTGG*FLHPLQ Trigger: TTGAAGTGGGTGAAGAAAGCAACCCCCTGTGGTTGC...CGAATTGCCCACCCAGCCCTTCCTTGCTGCTACAATGAGCTCTGACAGTCTCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR-3UTR CCA 90 bp | TGTTGTGAGTTGGAGGTTGGACAGAGAGCTGATCCTCCCAGCAAGAGCACTTGGAACAAAACCCAGGTCTaGGCAAGGTCATGGGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: CCELEVGQRADPPSKSTWNKTQV*ARSWGP Trigger: TGGCCCCCATGACCTTGCCCAGACCTGGGTTTTGTT...CCAAGTGCTCTTGCTGGGAGGATCAGCTCTCTGTCCAACCTCCAACTCACAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR-3UTR CCA 90 bp | CGGAGACTGTCAGAGCTCATTGTAGCAGCAAGGAAGGGCTGGGTGGGCAATTCGGTTAGTCACAGCACTTaGCTAAGTGAGGTGCGATCT | + |
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Preference number: 2 (lower is better) Translates to: RRLSELIVAARKGWVGNSVSHST*LSEVRS Trigger: AGATCGCACCTCACTTAGCCAAGTGCTGTGACTAAC...CGAATTGCCCACCCAGCCCTTCCTTGCTGCTACAATGAGCTCTGACAGTCTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR-3UTR CCA 90 bp | CGGAGACTGTCAGAGCTCATTGTAGCAGCAAGGAAGGGCTGGGTGGGCAATTCGCCCAGCAAGAGCACTTaGAAAACAGAGAGAGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: RRLSELIVAARKGWVGNSPSKST*KTERER Trigger: TCTCTCTCTCTCTGTTTTCCAAGTGCTCTTGCTGGG...CGAATTGCCCACCCAGCCCTTCCTTGCTGCTACAATGAGCTCTGACAGTCTCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR-3UTR TCA 90 bp | CGGAGACTGTCAGAGCTCATTGTAGCAGCAAGGAAGGGCTGGGTGGGCAATTCGGGAACTATTGCGAAGTaGGAACACTCAGAGGTTAGT | + |
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Preference number: 2 (lower is better) Translates to: RRLSELIVAARKGWVGNSGTIAK*EHSEVS Trigger: ACTAACCTCTGAGTGTTCTCACTTCGCAATAGTTCC...CGAATTGCCCACCCAGCCCTTCCTTGCTGCTACAATGAGCTCTGACAGTCTCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR-3UTR GCA 90 bp | TGGCGTTCTATTAGGACCTTTCAACCAGAGCACCACCAGATGGCTGTTCTGTATGGAAGGGGCGGGGCCTaGGTGGAATACATCAGCTTT | + |
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Preference number: 2 (lower is better) Translates to: WRSIRTFQPEHHQMAVLYGRGGA*VEYISF Trigger: AAAGCTGATGTATTCCACGCAGGCCCCGCCCCTTCC...ATACAGAACAGCCATCTGGTGGTGCTCTGGTTGAAAGGTCCTAATAGAACGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR CAA 90 bp | CTCCCTGAGGCAGGGACATTTCCAAAAGAGCCTGAAAAAGTCTGCTaGCTGCTTAGGACACCACGGAGACTGTCAGAGCTCATTGTAGCA | + |
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Preference number: 2 (lower is better) Translates to: LPEAGTFPKEPEKVC*LLRTPRRLSELIVA Trigger: TGCTACAATGAGCTCTGACAGTCTCCGTGGTGTCCTAAGCAGCAAGCAGACTTTTTCAGGCTCTTTTGGAAATGTCCCTGCCTCAGGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR-3UTR GCA 90 bp | TTCTCTCCTTCCACTGTGTGGATCCTGAAGAGCAAGCTCAGGACCTCAGGTGGACCAGGTGGGAACTATTaGGAAGTGAGAACACTCAGA | + |
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Preference number: 2 (lower is better) Translates to: FSPSTVWILKSKLRTSGGPGGNY*EVRTLR Trigger: TCTGAGTGTTCTCACTTCGCAATAGTTCCCACCTGG...TCCACCTGAGGTCCTGAGCTTGCTCTTCAGGATCCACACAGTGGAAGGAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR-3UTR TCA 90 bp | CGGAGACTGTCAGAGCTCATTGTAGCAGCAAGGAAGGGCTGGGTGGGCAATTCGCAGATGGCACATTTGTaGTTTATACAGCAGTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: RRLSELIVAARKGWVGNSQMAHL*FIQQFV Trigger: AACAAACTGCTGTATAAATCACAAATGTGCCATCTG...CGAATTGCCCACCCAGCCCTTCCTTGCTGCTACAATGAGCTCTGACAGTCTCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR-3UTR CCA 90 bp | TGTTGTGAGTTGGAGGTTGGACAGAGAGCTGATCCTCCCAGCAAGAGCACTTGGCGCTTATGTACACAGTaGGTTGTTTTATTCACCAGG | + |
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Preference number: 2 (lower is better) Translates to: CCELEVGQRADPPSKSTWRLCTQ*VVLFTR Trigger: CCTGGTGAATAAAACAACCCACTGTGTACATAAGCG...CCAAGTGCTCTTGCTGGGAGGATCAGCTCTCTGTCCAACCTCCAACTCACAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTCCTTCCACTGTGTGGATCCTGAAGAGCAAGCTCAGGACCTCAGGTGGATTGGGAGTCGGCCTGTaGAATCATTATGAAGATAAA | + |
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Preference number: 2 (lower is better) Translates to: FSPSTVWILKSKLRTSGGLGVGL*NHYEDK Trigger: TTTATCTTCATAATGATTTCACAGGCCGACTCCCAA...TCCACCTGAGGTCCTGAGCTTGCTCTTCAGGATCCACACAGTGGAAGGAGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR-3UTR GCA 90 bp | TACTCTTGCTCAATAACAGACAATCTGCCTTTAAGTTCTTTAAGGCAGAGCTTTGAGAGTTCCCGTGCTTaGTGCACTGACATCCGCCCG | + |
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Preference number: 2 (lower is better) Translates to: YSCSITDNLPLSSLRQSFESSRA*CTDIRP Trigger: CGGGCGGATGTCAGTGCAGCAAGCACGGGAACTCTC...AAAGCTCTGCCTTAAAGAACTTAAAGGCAGATTGTCTGTTATTGAGCAAGAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR-3UTR GCA 90 bp | TACTCTTGCTCAATAACAGACAATCTGCCTTTAAGTTCTTTAAGGCAGAGCTTTGGAAGGGGCAGGGCCTaGGTGGAATACATCAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: YSCSITDNLPLSSLRQSFGRGRA*VEYISL Trigger: AAGGCTGATGTATTCCACGCAGGCCCTGCCCCTTCC...AAAGCTCTGCCTTAAAGAACTTAAAGGCAGATTGTCTGTTATTGAGCAAGAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR-3UTR CCA 90 bp | TGTTGTGAGTTGGAGGTTGGACAGAGAGCTGATCCTCCCAGCAAGAGCACTTGGAAACGGTGCATTCAATaGTTCAATTTACATTCCAAC | + |
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Preference number: 2 (lower is better) Translates to: CCELEVGQRADPPSKSTWKRCIQ*FNLHSN Trigger: GTTGGAATGTAAATTGAACCATTGAATGCACCGTTT...CCAAGTGCTCTTGCTGGGAGGATCAGCTCTCTGTCCAACCTCCAACTCACAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR-3UTR CCA 90 bp | TACTCTTGCTCAATAACAGACAATCTGCCTTTAAGTTCTTTAAGGCAGAGCTTTGAGTTTCCTATAGAGTaGCACCTCCTGACCAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: YSCSITDNLPLSSLRQSFEFPIE*HLLTSQ Trigger: TTGGCTGGTCAGGAGGTGCCACTCTATAGGAAACTC...AAAGCTCTGCCTTAAAGAACTTAAAGGCAGATTGTCTGTTATTGAGCAAGAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR CAA 90 bp | CTGACAAATCAACGATCAGTCCTTTTTCTCGGCAGTCCAAGAAGTTaGCCAGCACTTGACAATCTGAATGCACATGAACATAGTAAACAA | + |
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Preference number: 2 (lower is better) Translates to: LTNQRSVLFLGSPRS*PALDNLNAHEHSKQ Trigger: TTGTTTACTATGTTCATGTGCATTCAGATTGTCAAGTGCTGGCAAACTTCTTGGACTGCCGAGAAAAAGGACTGATCGTTGATTTGTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR-3UTR TCA 90 bp | TACTCTTGCTCAATAACAGACAATCTGCCTTTAAGTTCTTTAAGGCAGAGCTTTCAGGGTAATACTCTGTaGCAGTGTACTTGTGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: YSCSITDNLPLSSLRQSFQGNTL*QCTCVS Trigger: GCTCACACAAGTACACTGTCACAGAGTATTACCCTG...AAAGCTCTGCCTTAAAGAACTTAAAGGCAGATTGTCTGTTATTGAGCAAGAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR-3UTR TCA 90 bp | TACTCTTGCTCAATAACAGACAATCTGCCTTTAAGTTCTTTAAGGCAGAGCTTTAAGAATGAACTCAAGTaGGAAAGCAAAACCCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: YSCSITDNLPLSSLRQSFKNELK*ESKTQS Trigger: GCTTTGGGTTTTGCTTTCTCACTTGAGTTCATTCTT...AAAGCTCTGCCTTAAAGAACTTAAAGGCAGATTGTCTGTTATTGAGCAAGAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR TCA 72 bp | AGTTCCCGTGCTTGCTGCACTGACATCCGCCCGCACTaGGGGCAGGCTTGCGGGAAGCTGATGACTACGCTT | + |
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Preference number: 3 (lower is better) Translates to: SSRACCTDIRPH*GQACGKLMTTL Trigger: AAGCGTAGTCATCAGCTTCCCGCAAGCCTGCCCTCAGTGCGGGCGGATGTCAGTGCAGCAAGCACGGGAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR CCA 72 bp | TGTCAGGTCGCTAAACTCAGGCACGGGGCTCAGCTCTaGGCAAGTGCTTTGTCACTGAGCTATCCCGCACCC | + |
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Preference number: 3 (lower is better) Translates to: CQVAKLRHGAQL*ASALSLSYPAP Trigger: GGGTGCGGGATAGCTCAGTGACAAAGCACTTGCCCAGAGCTGAGCCCCGTGCCTGAGTTTAGCGACCTGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR TCA 72 bp | CAGGCAGAAAGTGAATTGATATCTCTGCACAGGGTCTaGGGAAGGGGCGGGGCCTGCGTGGAATACATCAGC | + |
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Preference number: 3 (lower is better) Translates to: QAESELISLHRV*GRGGACVEYIS Trigger: GCTGATGTATTCCACGCAGGCCCCGCCCCTTCCTCAGACCCTGTGCAGAGATATCAATTCACTTTCTGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR CCA 72 bp | CTCTGTGGCACCCTTCAGAGGACAACTGACGGGAGTTaGTTCTCTCCTTCCACTGTGTGGATCCTGAAGAGC | + |
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Preference number: 3 (lower is better) Translates to: LCGTLQRTTDGS*FSPSTVWILKS Trigger: GCTCTTCAGGATCCACACAGTGGAAGGAGAGAACCAACTCCCGTCAGTTGTCCTCTGAAGGGTGCCACAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR CCA 72 bp | GTTTCCTATAGAGTGGCACCTCCTGACCAGCCAAGGTaGCGGCTGACAGTAAAACCACTGGCACAACTTCTT | + |
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Preference number: 3 (lower is better) Translates to: VSYRVAPPDQPR*RLTVKPLAQLL Trigger: AAGAAGTTGTGCCAGTGGTTTTACTGTCAGCCGCCACCTTGGCTGGTCAGGAGGTGCCACTCTATAGGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR-3UTR CAA 90 bp | CGGAGACTGTCAGAGCTCATTGTAGCAGCAAGGAAGGGCTGGGTGGGCAATTCGCTTCCCAGGTATGTCTaGTCTATGTTTACATGCCAC | + |
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Preference number: 3 (lower is better) Translates to: RRLSELIVAARKGWVGNSLPRYV*SMFTCH Trigger: GTGGCATGTAAACATAGACAAGACATACCTGGGAAG...CGAATTGCCCACCCAGCCCTTCCTTGCTGCTACAATGAGCTCTGACAGTCTCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR-3UTR CAA 90 bp | TTCTCTCCTTCCACTGTGTGGATCCTGAAGAGCAAGCTCAGGACCTCAGGTGGACAGGCAGAAAGTGAATaGATATCTCTGCACAGGGTC | + |
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Preference number: 3 (lower is better) Translates to: FSPSTVWILKSKLRTSGGQAESE*ISLHRV Trigger: GACCCTGTGCAGAGATATCAATTCACTTTCTGCCTG...TCCACCTGAGGTCCTGAGCTTGCTCTTCAGGATCCACACAGTGGAAGGAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR TCA 72 bp | CAGTGGGTTGTTTTATTCACCAGGCAGAAAGTGAATTaGTATCTCTGCACAGGGTCTGAGGAAGGGGCGGGG | + |
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Preference number: 3 (lower is better) Translates to: QWVVLFTRQKVN*YLCTGSEEGAG Trigger: CCCCGCCCCTTCCTCAGACCCTGTGCAGAGATATCAATTCACTTTCTGCCTGGTGAATAAAACAACCCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR GCA 72 bp | GAGGCAGGGACATTTCCAAAAGAGCCTGAAAAAGTCTaGTTGCTGCTTAGGACACCACGGAGACTGTCAGAG | + |
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Preference number: 3 (lower is better) Translates to: EAGTFPKEPEKV*LLLRTPRRLSE Trigger: CTCTGACAGTCTCCGTGGTGTCCTAAGCAGCAAGCAGACTTTTTCAGGCTCTTTTGGAAATGTCCCTGCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR CCA 72 bp | CAGTGGTTCAGGCACCCGAGTTTCCCGTTGGAAGGCTaGACAGTAGCTGAAAGCATTTTACTCAAGAACGAG | + |
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Preference number: 3 (lower is better) Translates to: QWFRHPSFPLEG*TVAESILLKNE Trigger: CTCGTTCTTGAGTAAAATGCTTTCAGCTACTGTCCAGCCTTCCAACGGGAAACTCGGGTGCCTGAACCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR CCA 72 bp | GTTGGACAGAGAGCTGATCCTCCCAGCAAGAGCACTTaGAAAACAGAGAGAGAGAGAGAGAGAGAGAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: VGQRADPPSKST*KTERERERERE Trigger: CTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTTTCCAAGTGCTCTTGCTGGGAGGATCAGCTCTCTGTCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR CCA 72 bp | AGACTGTCAGAGCTCATTGTAGCAGCAAGGAAGGGCTaGGTGGGCAATTCGAGGAATCTCATGTACACCACA | + |
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Preference number: 3 (lower is better) Translates to: RLSELIVAARKG*VGNSRNLMYTT Trigger: TGTGGTGTACATGAGATTCCTCGAATTGCCCACCCAGCCCTTCCTTGCTGCTACAATGAGCTCTGACAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR-3UTR CAA 90 bp | CGGAGACTGTCAGAGCTCATTGTAGCAGCAAGGAAGGGCTGGGTGGGCAATTCGCTAATTTTCCTAAGGTaGTTCAACAGTACCACATGG | + |
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Preference number: 3 (lower is better) Translates to: RRLSELIVAARKGWVGNSLIFLR*FNSTTW Trigger: CCATGTGGTACTGTTGAACAACCTTAGGAAAATTAG...CGAATTGCCCACCCAGCCCTTCCTTGCTGCTACAATGAGCTCTGACAGTCTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR GCA 72 bp | CCCCCAACCCCCATCTTAACTCACATGAGGACCATGTaGTTCCCAGGTATGTCTTGTCTATGTTTACATGCC | + |
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Preference number: 3 (lower is better) Translates to: PPTPILTHMRTM*FPGMSCLCLHA Trigger: GGCATGTAAACATAGACAAGACATACCTGGGAAGCACATGGTCCTCATGTGAGTTAAGATGGGGGTTGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR GCA 72 bp | CAGGGACATTTCCAAAAGAGCCTGAAAAAGTCTGCTTaGTGCTTAGGACACCACGGAGACTGTCAGAGCTCA | + |
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Preference number: 3 (lower is better) Translates to: QGHFQKSLKKSA*CLGHHGDCQSS Trigger: TGAGCTCTGACAGTCTCCGTGGTGTCCTAAGCAGCAAGCAGACTTTTTCAGGCTCTTTTGGAAATGTCCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| 3UTR CCA 72 bp | GAAATCATGACTGAAATAGAAGCACTTGCACGGGGCTaGCCCTTCACACAGAGTGATGAGTCCTGTTCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: EIMTEIEALARG*PFTQSDESCSL Trigger: AAGGGAACAGGACTCATCACTCTGTGTGAAGGGCCAGCCCCGTGCAAGTGCTTCTATTTCAGTCATGATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| 3UTR CCA 72 bp | TCTTTATTAGTGGGCGACTTTGGGAAGGGGACTGGATaGGAGCAGATACTTGTGTGGGAGGCTGATATCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SLLVGDFGKGTG*EQILVWEADIR Trigger: TCTGATATCAGCCTCCCACACAAGTATCTGCTCCCATCCAGTCCCCTTCCCAAAGTCGCCCACTAATAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| 3UTR-3UTR CAA 90 bp | CGGAGACTGTCAGAGCTCATTGTAGCAGCAAGGAAGGGCTGGGTGGGCAATTCGACTATGGTGTTTAACTaGAATAGATCCCTTCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RRLSELIVAARKGWVGNSTMVFN*NRSLLK Trigger: CTTCAGAAGGGATCTATTCAAGTTAAACACCATAGT...CGAATTGCCCACCCAGCCCTTCCTTGCTGCTACAATGAGCTCTGACAGTCTCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| 3UTR TCA 72 bp | TGTCAGAAGCAGGGGGCTTTTCAGGGTAATACTCTGTaGCAGTGTACTTGTGTGAGCTCAGAGTCTGGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: CQKQGAFQGNTL*QCTCVSSESGV Trigger: AACTCCAGACTCTGAGCTCACACAAGTACACTGTCACAGAGTATTACCCTGAAAAGCCCCCTGCTTCTGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| 3UTR GCA 72 bp | GGACATTTCCAAAAGAGCCTGAAAAAGTCTGCTTGCTaGTTAGGACACCACGGAGACTGTCAGAGCTCATTG | + |
|
Preference number: 3 (lower is better) Translates to: GHFQKSLKKSAC*LGHHGDCQSSL Trigger: CAATGAGCTCTGACAGTCTCCGTGGTGTCCTAAGCAGCAAGCAGACTTTTTCAGGCTCTTTTGGAAATGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| 3UTR GCA 72 bp | GAGAGAGAGAGAGAGAGAGGAGGCAGACAGCCTCTCTaGACTAAGTTAGATCAGAGAACATTAGAAAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: ERERERGGRQPL*TKLDQRTLEKP Trigger: TGGCTTTTCTAATGTTCTCTGATCTAACTTAGTGCAGAGAGGCTGTCTGCCTCCTCTCTCTCTCTCTCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| 3UTR-3UTR CAA 90 bp | CTTTTTAACAGAGGAAGGGGCAGGGCCTGCGTGGAATACATCAGCCTTCTAACACTCCTTACTCAATCTTaGTGTACATGTTGTCTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LFNRGRGRACVEYISLLTLLTQS*CTCCLV Trigger: CACAAGACAACATGTACACAAAGATTGAGTAAGGAG...TGTTAGAAGGCTGATGTATTCCACGCAGGCCCTGCCCCTTCCTCTGTTAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| 3UTR TCA 72 bp | GCACCCGAGTTTCCCGTTGGAAGGCTGGACAGTAGCTaGAAGCATTTTACTCAAGAACGAGAACAAAAACTT | + |
|
Preference number: 3 (lower is better) Translates to: APEFPVGRLDSS*KHFTQEREQKL Trigger: AAGTTTTTGTTCTCGTTCTTGAGTAAAATGCTTTCAGCTACTGTCCAGCCTTCCAACGGGAAACTCGGGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| 3UTR CCA 72 bp | ATGAACTCAAGTGAGAAAGCAAAACCCAAAGCCAGGTaGAACTACCCATTCCTGCGGGCAGAATCAATAACA | + |
|
Preference number: 3 (lower is better) Translates to: MNSSEKAKPKAR*NYPFLRAESIT Trigger: TGTTATTGATTCTGCCCGCAGGAATGGGTAGTTCCACCTGGCTTTGGGTTTTGCTTTCTCACTTGAGTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| 3UTR-3UTR CAA 90 bp | CATCGGATGCATCCACATATCAAGGCATCAAAAGTGATTAAATTACTCAAAACACGCAACCACAGGGGGTaGCTTTCTTCACCCACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: HRMHPHIKASKVIKLLKTRNHRG*LSSPTS Trigger: TGAAGTGGGTGAAGAAAGCAACCCCCTGTGGTTGCG...TGTTTTGAGTAATTTAATCACTTTTGATGCCTTGATATGTGGATGCATCCGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| 3UTR TCA 72 bp | CCAACCTCGGAGTTAAGAGTTCAGATGGCACATTTGTaGTTTATACAGCAGTTTGTTGTGAGTTGGAGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: PTSELRVQMAHL*FIQQFVVSWRL Trigger: CAACCTCCAACTCACAACAAACTGCTGTATAAATCACAAATGTGCCATCTGAACTCTTAACTCCGAGGTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| 3UTR GCA 72 bp | ACTGGGACTTCTTACCATGTCTCTAAACAGAAAAGGTaGAAACATCCCATCGACTCTTCTAGAAGTTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: TGTSYHVSKQKR*KHPIDSSRSFL Trigger: GAGGAAACTTCTAGAAGAGTCGATGGGATGTTTGCACCTTTTCTGTTTAGAGACATGGTAAGAAGTCCCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| 3UTR TCA 72 bp | TCGGCAGTCCAAGAAGTTTGCCAGCACTTGACAATCTaGATGCACATGAACATAGTAAACAAATGCAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: SAVQEVCQHLTI*MHMNIVNKCKP Trigger: TGGTTTGCATTTGTTTACTATGTTCATGTGCATTCAGATTGTCAAGTGCTGGCAAACTTCTTGGACTGCCGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| 3UTR TCA 72 bp | TTCATGAGACCTACGATTCCTTTCCTTTTACAAGAATaGACTCAAGTGAGAAAGCAAAACCCAAAGCCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: FMRPTIPFLLQE*TQVRKQNPKPG Trigger: ACCTGGCTTTGGGTTTTGCTTTCTCACTTGAGTTCATTCTTGTAAAAGGAAAGGAATCGTAGGTCTCATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| 3UTR TCA 72 bp | CCACACAGCGAGATAACACTAAGACGTTTCCTTTCATaGACATGTATTCTGACAAATCAACGATCAGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: PHSEITLRRFLS*TCILTNQRSVL Trigger: AAGGACTGATCGTTGATTTGTCAGAATACATGTTCATGAAAGGAAACGTCTTAGTGTTATCTCGCTGTGTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| 3UTR-3UTR CAA 90 bp | TACTCTTGCTCAATAACAGACAATCTGCCTTTAAGTTCTTTAAGGCAGAGCTTTAAAGTAAAGATGGTGTaGGCAAAGTATCTTCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: YSCSITDNLPLSSLRQSFKVKMV*AKYLHP Trigger: TGGGTGAAGATACTTTGCCAACACCATCTTTACTTT...AAAGCTCTGCCTTAAAGAACTTAAAGGCAGATTGTCTGTTATTGAGCAAGAGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| 3UTR TCA 72 bp | TCCATCGGATGCATCCACATATCAAGGCATCAAAAGTaGTTAAATTACTCAAAACAGGCTTCTAATTCTATG | + |
|
Preference number: 3 (lower is better) Translates to: SIGCIHISRHQK*LNYSKQASNSM Trigger: CATAGAATTAGAAGCCTGTTTTGAGTAATTTAATCACTTTTGATGCCTTGATATGTGGATGCATCCGATGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR GCA 90 bp | CAGATCAGTGAGACGCCAAATGATACATGCACACAAGGAGCGCAACCACAGGGGCGGAAGGCGGGCTGCTaGTCGGAGAACTGCCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QISETPNDTCTQGAQPQGRKAGC*SENCRN Trigger: GTTCCGGCAGTTCTCCGAGCAGCAGCCCGCCTTCCG...CCCCTGTGGTTGCGCTCCTTGTGTGCATGTATCATTTGGCGTCTCACTGATCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CCA 90 bp | CGGAGACTGTCAGAGCTCATTGTAGCAGCAAGGAAGGGCTGGGTGGGCAATTCGCGGGACCAGACTGGATaGTGCCGGACCTGTTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: RRLSELIVAARKGWVGNSRDQTG*CRTCSC Trigger: ACATGAACAGGTCCGGCACCATCCAGTCTGGTCCCG...CGAATTGCCCACCCAGCCCTTCCTTGCTGCTACAATGAGCTCTGACAGTCTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CCA 90 bp | TTCTCTCCTTCCACTGTGTGGATCCTGAAGAGCAAGCTCAGGACCTCAGGTGGAAGGCTGAACACGGCGTaGGGGATGCGTTCCAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: FSPSTVWILKSKLRTSGGRLNTA*GMRSRS Trigger: CGACCTGGAACGCATCCCCCACGCCGTGTTCAGCCT...TCCACCTGAGGTCCTGAGCTTGCTCTTCAGGATCCACACAGTGGAAGGAGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR GCA 90 bp | TTCTCTCCTTCCACTGTGTGGATCCTGAAGAGCAAGCTCAGGACCTCAGGTGGATTGACGGAGCACTGGTaGAGACAGAGCTCCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FSPSTVWILKSKLRTSGGLTEHW*RQSSCR Trigger: CCTGCAGGAGCTCTGTCTGCACCAGTGCTCCGTCAA...TCCACCTGAGGTCCTGAGCTTGCTCTTCAGGATCCACACAGTGGAAGGAGAGAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR GCA 90 bp | TGTTGTGAGTTGGAGGTTGGACAGAGAGCTGATCCTCCCAGCAAGAGCACTTGGTTTGTCTGCAGCTTCTaGCGCAGTTTGTCCGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CCELEVGQRADPPSKSTWFVCSF*RSLSGV Trigger: GACCCCGGACAAACTGCGGCAGAAGCTGCAGACAAA...CCAAGTGCTCTTGCTGGGAGGATCAGCTCTCTGTCCAACCTCCAACTCACAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CCA 90 bp | CGGAGACTGTCAGAGCTCATTGTAGCAGCAAGGAAGGGCTGGGTGGGCAATTCGTCTCAAACAAGGCCTTaGCCTGCTCACCTTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RRLSELIVAARKGWVGNSSQTRP*PAHLPS Trigger: AGAAGGAAGGTGAGCAGGCCAAGGCCTTGTTTGAGA...CGAATTGCCCACCCAGCCCTTCCTTGCTGCTACAATGAGCTCTGACAGTCTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CCA 90 bp | TGTTGTGAGTTGGAGGTTGGACAGAGAGCTGATCCTCCCAGCAAGAGCACTTGGAGCTCCAGGCGGTTGTaGGCATTTGTCTGCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CCELEVGQRADPPSKSTWSSRRL*AFVCSF Trigger: GAAGCTGCAGACAAATGCCCACAACCGCCTGGAGCT...CCAAGTGCTCTTGCTGGGAGGATCAGCTCTCTGTCCAACCTCCAACTCACAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CCA 90 bp | CAGATCAGTGAGACGCCAAATGATACATGCACACAAGGAGCGCAACCACAGGGGCACATCTTCTGGAGGTaGCTGGACACATCCACCACG | + |
|
Preference number: 4 (lower is better) Translates to: QISETPNDTCTQGAQPQGHIFWR*LDTSTT Trigger: CGTGGTGGATGTGTCCAGCCACCTCCAGAAGATGTG...CCCCTGTGGTTGCGCTCCTTGTGTGCATGTATCATTTGGCGTCTCACTGATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CCA 90 bp | TTCTCTCCTTCCACTGTGTGGATCCTGAAGAGCAAGCTCAGGACCTCAGGTGGATTCAGGTCCAGCTCCTaGAGACTGAGCAGGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FSPSTVWILKSKLRTSGGFRSSS*RLSRLN Trigger: GTTCAGCCTGCTCAGTCTCCAGGAGCTGGACCTGAA...TCCACCTGAGGTCCTGAGCTTGCTCTTCAGGATCCACACAGTGGAAGGAGAGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR GCA 90 bp | CAGATCAGTGAGACGCCAAATGATACATGCACACAAGGAGCGCAACCACAGGGGGACCAGACTGGATGGTaGCGGACCTGTTCATGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QISETPNDTCTQGAQPQGDQTGW*RTCSCC Trigger: ACAACATGAACAGGTCCGGCACCATCCAGTCTGGTC...CCCCTGTGGTTGCGCTCCTTGTGTGCATGTATCATTTGGCGTCTCACTGATCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR TCA 90 bp | CAGATCAGTGAGACGCCAAATGATACATGCACACAAGGAGCGCAACCACAGGGGGAGACTGCAACTCTGTaGTTTCAAACACGGTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QISETPNDTCTQGAQPQGETATL*FQTRCP Trigger: CGGACACCGTGTTTGAAATCACAGAGTTGCAGTCTC...CCCCTGTGGTTGCGCTCCTTGTGTGCATGTATCATTTGGCGTCTCACTGATCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR GCA 90 bp | TGTTGTGAGTTGGAGGTTGGACAGAGAGCTGATCCTCCCAGCAAGAGCACTTGGTTGTGGGCATTTGTCTaGAGCTTCTGCCGCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CCELEVGQRADPPSKSTWLWAFV*SFCRSL Trigger: CAAACTGCGGCAGAAGCTGCAGACAAATGCCCACAA...CCAAGTGCTCTTGCTGGGAGGATCAGCTCTCTGTCCAACCTCCAACTCACAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR GCA 90 bp | TGTTGTGAGTTGGAGGTTGGACAGAGAGCTGATCCTCCCAGCAAGAGCACTTGGGCATCACCAGTTTGGTaGCATCATTGTGGACGCACA | + |
|
Preference number: 4 (lower is better) Translates to: CCELEVGQRADPPSKSTWASPVW*HHCGRT Trigger: TGTGCGTCCACAATGATGGCACCAAACTGGTGATGC...CCAAGTGCTCTTGCTGGGAGGATCAGCTCTCTGTCCAACCTCCAACTCACAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CCA 90 bp | TGTTGTGAGTTGGAGGTTGGACAGAGAGCTGATCCTCCCAGCAAGAGCACTTGGCAGTCCACTGTGAACTaGACTTTGGAAACCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CCELEVGQRADPPSKSTWQSTVN*TLETRA Trigger: TGCCCTGGTTTCCAAAGTCCAGTTCACAGTGGACTG...CCAAGTGCTCTTGCTGGGAGGATCAGCTCTCTGTCCAACCTCCAACTCACAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CCA 90 bp | CGGAGACTGTCAGAGCTCATTGTAGCAGCAAGGAAGGGCTGGGTGGGCAATTCGACACTGCAAACCGCTTaGAATAGAGAGGGTCATACT | + |
|
Preference number: 4 (lower is better) Translates to: RRLSELIVAARKGWVGNSTLQTA*NREGHT Trigger: AGTATGACCCTCTCTATTCCAAGCGGTTTGCAGTGT...CGAATTGCCCACCCAGCCCTTCCTTGCTGCTACAATGAGCTCTGACAGTCTCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR TCA 90 bp | TTCTCTCCTTCCACTGTGTGGATCCTGAAGAGCAAGCTCAGGACCTCAGGTGGAATGAAACTGTACTGCTaGAGGTCCAGGTCTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSPSTVWILKSKLRTSGGMKLYC*RSRSVF Trigger: GAAGACAGACCTGGACCTTCAGCAGTACAGTTTCAT...TCCACCTGAGGTCCTGAGCTTGCTCTTCAGGATCCACACAGTGGAAGGAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR TCA 90 bp | TTCTCTCCTTCCACTGTGTGGATCCTGAAGAGCAAGCTCAGGACCTCAGGTGGATGGATCCGGGGAATTTaGACCAGAAGTTGCTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSPSTVWILKSKLRTSGGWIRGI*TRSCYR Trigger: TCTGTAGCAACTTCTGGTTCAAATTCCCCGGATCCA...TCCACCTGAGGTCCTGAGCTTGCTCTTCAGGATCCACACAGTGGAAGGAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR TCA 90 bp | CAGATCAGTGAGACGCCAAATGATACATGCACACAAGGAGCGCAACCACAGGGGGGCTGGTCAGTTTCTTaGTGTGCTCTGGAATGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: QISETPNDTCTQGAQPQGGWSVS*CALECK Trigger: CTTACATTCCAGAGCACATCAAGAAACTGACCAGCC...CCCCTGTGGTTGCGCTCCTTGTGTGCATGTATCATTTGGCGTCTCACTGATCTG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR TCA 90 bp | CAGATCAGTGAGACGCCAAATGATACATGCACACAAGGAGCGCAACCACAGGGGCTACCTTATTGTGGCTaGAAAACAGTCTCTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QISETPNDTCTQGAQPQGLPYCG*KTVSPG Trigger: GCCTGGAGAGACTGTTTTTCAGCCACAATAAGGTAG...CCCCTGTGGTTGCGCTCCTTGTGTGCATGTATCATTTGGCGTCTCACTGATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CCA 90 bp | CTTTTTAACAGAGGAAGGGGCAGGGCCTGCGTGGAATACATCAGCCTTCTAACACTGCCTGGGAGACATTaGGAACGGAAGAGTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LFNRGRGRACVEYISLLTLPGRH*ERKSGS Trigger: AGAACCACTCTTCCGTTCCCAATGTCTCCCAGGCAG...TGTTAGAAGGCTGATGTATTCCACGCAGGCCCTGCCCCTTCCTCTGTTAAAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CCA 90 bp | CAGATCAGTGAGACGCCAAATGATACATGCACACAAGGAGCGCAACCACAGGGGGTACTGATAACTGCCTaGGAGACATTGGGAACGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QISETPNDTCTQGAQPQGVLITA*ETLGTE Trigger: TTCCGTTCCCAATGTCTCCCAGGCAGTTATCAGTAC...CCCCTGTGGTTGCGCTCCTTGTGTGCATGTATCATTTGGCGTCTCACTGATCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| 3UTR CAA 72 bp | ATGATACATGCACACAAGGAGCGCAACCACAGGGGGTaGCTTTCTTCACCCACTTCAAAAGCCTGTCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: MIHAHKERNHRG*LSSPTSKACPR Trigger: CCTAGGACAGGCTTTTGAAGTGGGTGAAGAAAGCAACCCCCTGTGGTTGCGCTCCTTGTGTGCATGTATCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| 3UTR CAA 72 bp | GCAGGGACATTTCCAAAAGAGCCTGAAAAAGTCTGCTaGCTGCTTAGGACACCACGGAGACTGTCAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AGTFPKEPEKVC*LLRTPRRLSEL Trigger: GAGCTCTGACAGTCTCCGTGGTGTCCTAAGCAGCAAGCAGACTTTTTCAGGCTCTTTTGGAAATGTCCCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR GCA 90 bp | TACTCTTGCTCAATAACAGACAATCTGCCTTTAAGTTCTTTAAGGCAGAGCTTTACCCGGAAGGCGGGCTaGTGCTCGGAGAACTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: YSCSITDNLPLSSLRQSFTRKAG*CSENCR Trigger: CCGGCAGTTCTCCGAGCAGCAGCCCGCCTTCCGGGT...AAAGCTCTGCCTTAAAGAACTTAAAGGCAGATTGTCTGTTATTGAGCAAGAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR GCA 90 bp | CAGATCAGTGAGACGCCAAATGATACATGCACACAAGGAGCGCAACCACAGGGGTCACCTTCTTCCACATaGAGTCTGAACTTCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: QISETPNDTCTQGAQPQGSPSST*SLNFFT Trigger: GGTGAAGAAGTTCAGACTGCATGTGGAAGAAGGTGA...CCCCTGTGGTTGCGCTCCTTGTGTGCATGTATCATTTGGCGTCTCACTGATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR GCA 90 bp | TGGCGTTCTATTAGGACCTTTCAACCAGAGCACCACCAGATGGCTGTTCTGTATTCGATTCCCGTCTCCTaGCGGACATACTCGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WRSIRTFQPEHHQMAVLYSIPVS*RTYSKE Trigger: TTCCTTCGAGTATGTCCGGCAGGAGACGGGAATCGA...ATACAGAACAGCCATCTGGTGGTGCTCTGGTTGAAAGGTCCTAATAGAACGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| 3UTR CAA 72 bp | GAGCACCACCAGATGGCTGTTCTGTATACCTTGAGCTaGAAGCCAACCTCGGAGTTAAGAGTTCAGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EHHQMAVLYTLS*KPTSELRVQMA Trigger: TGCCATCTGAACTCTTAACTCCGAGGTTGGCTTCAAGCTCAAGGTATACAGAACAGCCATCTGGTGGTGCTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| 3UTR CAA 72 bp | CAACCAGAGCACCACCAGATGGCTGTTCTGTATACCTaGAGCTTGAAGCCAACCTCGGAGTTAAGAGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QPEHHQMAVLYT*SLKPTSELRVQ Trigger: CTGAACTCTTAACTCCGAGGTTGGCTTCAAGCTCAAGGTATACAGAACAGCCATCTGGTGGTGCTCTGGTTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR TCA 90 bp | TGGCGTTCTATTAGGACCTTTCAACCAGAGCACCACCAGATGGCTGTTCTGTATGAACTTTTCAGGAATTaGCTTGAGAGACTGGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: WRSIRTFQPEHHQMAVLYELFRN*LERLGP Trigger: AGGTCCCAGTCTCTCAAGTCAATTCCTGAAAAGTTC...ATACAGAACAGCCATCTGGTGGTGCTCTGGTTGAAAGGTCCTAATAGAACGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR TCA 90 bp | TGGCGTTCTATTAGGACCTTTCAACCAGAGCACCACCAGATGGCTGTTCTGTATCATTACAGTCCACTGTaGACTGGACTTTGGAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: WRSIRTFQPEHHQMAVLYHYSPL*TGLWKP Trigger: TGGTTTCCAAAGTCCAGTTCACAGTGGACTGTAATG...ATACAGAACAGCCATCTGGTGGTGCTCTGGTTGAAAGGTCCTAATAGAACGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR GCA 90 bp | CAGATCAGTGAGACGCCAAATGATACATGCACACAAGGAGCGCAACCACAGGGGCAGATGATCTTGTCTTaGATGACCTGTAAAGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: QISETPNDTCTQGAQPQGQMILS*MTCKVH Trigger: ATGTACTTTACAGGTCATGCAAGACAAGATCATCTG...CCCCTGTGGTTGCGCTCCTTGTGTGCATGTATCATTTGGCGTCTCACTGATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CCA 90 bp | TGGCGTTCTATTAGGACCTTTCAACCAGAGCACCACCAGATGGCTGTTCTGTATGAAGTAGAGTTCATCTaGGAGGCTCTCCACTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: WRSIRTFQPEHHQMAVLYEVEFI*EALHFV Trigger: AACAAAGTGGAGAGCCTCCCAGATGAACTCTACTTC...ATACAGAACAGCCATCTGGTGGTGCTCTGGTTGAAAGGTCCTAATAGAACGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| 3UTR CAA 72 bp | TCAATAAAAGCTTTGCCAGCCACCAGGTGGGAACTATaGCGAAGTGAGAACACTCAGAGGTTAGTCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SIKALPATRWEL*RSENTQRLVTA Trigger: TGCTGTGACTAACCTCTGAGTGTTCTCACTTCGCAATAGTTCCCACCTGGTGGCTGGCAAAGCTTTTATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR TCA 90 bp | TACTCTTGCTCAATAACAGACAATCTGCCTTTAAGTTCTTTAAGGCAGAGCTTTCTGCTCCCGGACATCTaGGGGCAGAGTCTCAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: YSCSITDNLPLSSLRQSFLLPDI*GQSLKQ Trigger: CTGTTTGAGACTCTGCCCTCAGATGTCCGGGAGCAG...AAAGCTCTGCCTTAAAGAACTTAAAGGCAGATTGTCTGTTATTGAGCAAGAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR GCA 90 bp | CTTTTTAACAGAGGAAGGGGCAGGGCCTGCGTGGAATACATCAGCCTTCTAACAAAATACTGTAAACTTTaGAGAACTCCGATTTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LFNRGRGRACVEYISLLTKYCKL*RTPISG Trigger: GCCCGAAATCGGAGTTCTGCAAAGTTTACAGTATTT...TGTTAGAAGGCTGATGTATTCCACGCAGGCCCTGCCCCTTCCTCTGTTAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR TCA 90 bp | TGGCGTTCTATTAGGACCTTTCAACCAGAGCACCACCAGATGGCTGTTCTGTATATTTCCAATTTTTGGTaGAAGTACGGAGAGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: WRSIRTFQPEHHQMAVLYISNFW*KYGEAV Trigger: AACAGCCTCTCCGTACTTTCACCAAAAATTGGAAAT...ATACAGAACAGCCATCTGGTGGTGCTCTGGTTGAAAGGTCCTAATAGAACGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CCA 90 bp | TACTCTTGCTCAATAACAGACAATCTGCCTTTAAGTTCTTTAAGGCAGAGCTTTCTCCGATCATCAGCATaGCCACCGAGAGGTAATCCG | + |
|
Preference number: 4 (lower is better) Translates to: YSCSITDNLPLSSLRQSFLRSSA*PPRGNP Trigger: CGGATTACCTCTCGGTGGCCATGCTGATGATCGGAG...AAAGCTCTGCCTTAAAGAACTTAAAGGCAGATTGTCTGTTATTGAGCAAGAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CCA 90 bp | TACTCTTGCTCAATAACAGACAATCTGCCTTTAAGTTCTTTAAGGCAGAGCTTTTTGCACAGGAAGAGGTaGGAGGGAAGCACCTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: YSCSITDNLPLSSLRQSFLHRKR*EGSTST Trigger: GGTAGAGGTGCTTCCCTCCCACCTCTTCCTGTGCAA...AAAGCTCTGCCTTAAAGAACTTAAAGGCAGATTGTCTGTTATTGAGCAAGAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| 3UTR CAA 72 bp | CAACGATCAGTCCTTTTTCTCGGCAGTCCAAGAAGTTaGCCAGCACTTGACAATCTGAATGCACATGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: QRSVLFLGSPRS*PALDNLNAHEH Trigger: ATGTTCATGTGCATTCAGATTGTCAAGTGCTGGCAAACTTCTTGGACTGCCGAGAAAAAGGACTGATCGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR TCA 90 bp | TACTCTTGCTCAATAACAGACAATCTGCCTTTAAGTTCTTTAAGGCAGAGCTTTACGGAAGAGTGGTTCTaGGCAGGCTGCACTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YSCSITDNLPLSSLRQSFTEEWF*AGCTLF Trigger: GAAAAGAGTGCAGCCTGCTCAGAACCACTCTTCCGT...AAAGCTCTGCCTTAAAGAACTTAAAGGCAGATTGTCTGTTATTGAGCAAGAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR TCA 90 bp | TGGCGTTCTATTAGGACCTTTCAACCAGAGCACCACCAGATGGCTGTTCTGTATCAAAGTGATTGCCTTTaGTGTCTAAGTAGGAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WRSIRTFQPEHHQMAVLYQSDCL*CLSRKE Trigger: TTCTTTCCTACTTAGACATCAAAGGCAATCACTTTG...ATACAGAACAGCCATCTGGTGGTGCTCTGGTTGAAAGGTCCTAATAGAACGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CCA 90 bp | CATCGGATGCATCCACATATCAAGGCATCAAAAGTGATTAAATTACTCAAAACAATCTTGACGGAGCACTaGTGCAGACAGAGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HRMHPHIKASKVIKLLKTILTEH*CRQSSC Trigger: GCAGGAGCTCTGTCTGCACCAGTGCTCCGTCAAGAT...TGTTTTGAGTAATTTAATCACTTTTGATGCCTTGATATGTGGATGCATCCGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| 3UTR CAA 72 bp | AGAGCTCGGACAGGTAGAAAGAAAGTAAAGATGGTGTaGGCAAAGTATCTTCACCCATTTAGAAGATGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RARTGRKKVKMV*AKYLHPFRRCQ Trigger: TTGGCATCTTCTAAATGGGTGAAGATACTTTGCCAACACCATCTTTACTTTCTTTCTACCTGTCCGAGCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR GCA 90 bp | TACTCTTGCTCAATAACAGACAATCTGCCTTTAAGTTCTTTAAGGCAGAGCTTTACGTCAGGCCATAGATaGTTACAAAGCACAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: YSCSITDNLPLSSLRQSFTSGHR*LQSTGS Trigger: GCTACCTGTGCTTTGTAAGCATCTATGGCCTGACGT...AAAGCTCTGCCTTAAAGAACTTAAAGGCAGATTGTCTGTTATTGAGCAAGAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CCA 90 bp | CATCGGATGCATCCACATATCAAGGCATCAAAAGTGATTAAATTACTCAAAACATTGGTGCCATCATTGTaGACGCACATCTTCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HRMHPHIKASKVIKLLKTLVPSL*THIFWR Trigger: CCTCCAGAAGATGTGCGTCCACAATGATGGCACCAA...TGTTTTGAGTAATTTAATCACTTTTGATGCCTTGATATGTGGATGCATCCGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR TCA 90 bp | TACTCTTGCTCAATAACAGACAATCTGCCTTTAAGTTCTTTAAGGCAGAGCTTTTTAACTTGTTCTCGCTaGCTTCAGACAGGAACACTG | + |
|
Preference number: 4 (lower is better) Translates to: YSCSITDNLPLSSLRQSFLTCSR*LQTGTL Trigger: CAGTGTTCCTGTCTGAAGTCAGCGAGAACAAGTTAA...AAAGCTCTGCCTTAAAGAACTTAAAGGCAGATTGTCTGTTATTGAGCAAGAGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR TCA 90 bp | CATCGGATGCATCCACATATCAAGGCATCAAAAGTGATTAAATTACTCAAAACAGGGAGGACTTCAAAGTaGTTGCCTTTGATGTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: HRMHPHIKASKVIKLLKTGRTSK*LPLMSK Trigger: CTTAGACATCAAAGGCAATCACTTTGAAGTCCTCCC...TGTTTTGAGTAATTTAATCACTTTTGATGCCTTGATATGTGGATGCATCCGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CCA 90 bp | CATCGGATGCATCCACATATCAAGGCATCAAAAGTGATTAAATTACTCAAAACAACCTCTACCTTATTGTaGCTGAAAAACAGTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HRMHPHIKASKVIKLLKTTSTLL*LKNSLS Trigger: GGAGAGACTGTTTTTCAGCCACAATAAGGTAGAGGT...TGTTTTGAGTAATTTAATCACTTTTGATGCCTTGATATGTGGATGCATCCGATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CCA 90 bp | TACTCTTGCTCAATAACAGACAATCTGCCTTTAAGTTCTTTAAGGCAGAGCTTTAGAACAAATGAGCCATaGTGTGATTGCAAGAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: YSCSITDNLPLSSLRQSFRTNEP*CDCKKS Trigger: ACTTTTCTTGCAATCACACCATGGCTCATTTGTTCT...AAAGCTCTGCCTTAAAGAACTTAAAGGCAGATTGTCTGTTATTGAGCAAGAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS GCA 90 bp | TTCAGGAAGGAGAGCGCGGCGCTGTGGATCTTGACGGAGCACTGGTaGAGACAGAGCTCCTGCAGGTTGTCTAGCTGGGCGATGGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: FRKESAALWILTEHW*RQSSCRLSSWAMVA Trigger: CGCCACCATCGCCCAGCTAGACAACCTGCAGGAGCTCTGTCTGCACCAGTGCTCCGTCAAGATCCACAGCGCCGCGCTCTCCTTCCTGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS CCA 90 bp | CTCAGGACCTTGAGATTCTCCTTCAGGAAGGAGAGCGCGGCGCTGTaGATCTTGACGGAGCACTGGTGCAGACAGAGCTCCTGCAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LRTLRFSFRKESAAL*ILTEHWCRQSSCRL Trigger: CAACCTGCAGGAGCTCTGTCTGCACCAGTGCTCCGTCAAGATCCACAGCGCCGCGCTCTCCTTCCTGAAGGAGAATCTCAAGGTCCTGAG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CAA 90 bp | TGTTGTGAGTTGGAGGTTGGACAGAGAGCTGATCCTCCCAGCAAGAGCACTTGGGCGGCGCTGTGGATCTaGACGGAGCACTGGTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: CCELEVGQRADPPSKSTWAALWI*TEHWCR Trigger: TCTGCACCAGTGCTCCGTCAAGATCCACAGCGCCGC...CCAAGTGCTCTTGCTGGGAGGATCAGCTCTCTGTCCAACCTCCAACTCACAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS CCA 90 bp | CCAGTTTGGTGCCATCATTGTGGACGCACATCTTCTGGAGGTGGCTaGACACATCCACCACGGCCTGAGGGATCTTGGAGACGTTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PVWCHHCGRTSSGGG*THPPRPEGSWRRCS Trigger: AGAGCAACGTCTCCAAGATCCCTCAGGCCGTGGTGGATGTGTCCAGCCACCTCCAGAAGATGTGCGTCCACAATGATGGCACCAAACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CAA 90 bp | TTCTCTCCTTCCACTGTGTGGATCCTGAAGAGCAAGCTCAGGACCTCAGGTGGATGCTCACCTTCCTTCTaGTCCAGAGCCCCCGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FSPSTVWILKSKLRTSGGCSPSF*SRAPAA Trigger: TGCTGCGGGGGCTCTGGACAAGAAGGAAGGTGAGCA...TCCACCTGAGGTCCTGAGCTTGCTCTTCAGGATCCACACAGTGGAAGGAGAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS TCA 90 bp | CCCCCGCAGCAGATTTGTCAACCACGAACTTTTCAGGAATTGACTTaGGAGACTGGGACCTCACCAGGTTGCCCTCGGGACCAGACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PPQQICQPRTFQELT*ETGTSPGCPRDQTG Trigger: TCCAGTCTGGTCCCGAGGGCAACCTGGTGAGGTCCCAGTCTCTCAAGTCAATTCCTGAAAAGTTCGTGGTTGACAAATCTGCTGCGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS TCA 90 bp | CAGAGCCCCCGCAGCAGATTTGTCAACCACGAACTTTTCAGGAATTaGCTTGAGAGACTGGGACCTCACCAGGTTGCCCTCGGGACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QSPRSRFVNHELFRN*LERLGPHQVALGTR Trigger: TCTGGTCCCGAGGGCAACCTGGTGAGGTCCCAGTCTCTCAAGTCAATTCCTGAAAAGTTCGTGGTTGACAAATCTGCTGCGGGGGCTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS CCA 90 bp | TTGACGGAGCACTGGTGCAGACAGAGCTCCTGCAGGTTGTCTAGCTaGGCGATGGTGGCGGGGATCATGACATTCTTAATGATCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LTEHWCRQSSCRLSS*AMVAGIMTFLMISS Trigger: GCTGGAGATCATTAAGAATGTCATGATCCCCGCCACCATCGCCCAGCTAGACAACCTGCAGGAGCTCTGTCTGCACCAGTGCTCCGTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CAA 90 bp | CTTTTTAACAGAGGAAGGGGCAGGGCCTGCGTGGAATACATCAGCCTTCTAACAGGCGGTTGTGGGCATTaGTCTGCAGCTTCTGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LFNRGRGRACVEYISLLTGGCGH*SAASAA Trigger: TGCGGCAGAAGCTGCAGACAAATGCCCACAACCGCC...TGTTAGAAGGCTGATGTATTCCACGCAGGCCCTGCCCCTTCCTCTGTTAAAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS CCA 90 bp | ATCTTCTTCAGGTTGTTGAGCATCACCAGTTTGGTGCCATCATTGTaGACGCACATCTTCTGGAGGTGGCTGGACACATCCACCACGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IFFRLLSITSLVPSL*THIFWRWLDTSTTA Trigger: GGCCGTGGTGGATGTGTCCAGCCACCTCCAGAAGATGTGCGTCCACAATGATGGCACCAAACTGGTGATGCTCAACAACCTGAAGAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CAA 90 bp | CAGATCAGTGAGACGCCAAATGATACATGCACACAAGGAGCGCAACCACAGGGGTTCTCAAACAAGGCCTaGGCCTGCTCACCTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QISETPNDTCTQGAQPQGFSNKA*ACSPSF Trigger: GAAGGAAGGTGAGCAGGCCAAGGCCTTGTTTGAGAA...CCCCTGTGGTTGCGCTCCTTGTGTGCATGTATCATTTGGCGTCTCACTGATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CAA 90 bp | CAGATCAGTGAGACGCCAAATGATACATGCACACAAGGAGCGCAACCACAGGGGCTGGATCCGGGGAATTaGAACCAGAAGTTGCTACAG | + |
|
Preference number: 5 (lower is better) Translates to: QISETPNDTCTQGAQPQGLDPGN*NQKLLQ Trigger: CTGTAGCAACTTCTGGTTCAAATTCCCCGGATCCAG...CCCCTGTGGTTGCGCTCCTTGTGTGCATGTATCATTTGGCGTCTCACTGATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CAA 90 bp | CGGAGACTGTCAGAGCTCATTGTAGCAGCAAGGAAGGGCTGGGTGGGCAATTCGGGGAGGCTCTCCACTTaGTTACAAGTGATGGAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: RRLSELIVAARKGWVGNSGRLST*LQVMEK Trigger: TTTTTCCATCACTTGTAACAAAGTGGAGAGCCTCCC...CGAATTGCCCACCCAGCCCTTCCTTGCTGCTACAATGAGCTCTGACAGTCTCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CAA 90 bp | TTCTCTCCTTCCACTGTGTGGATCCTGAAGAGCAAGCTCAGGACCTCAGGTGGACTCATGTCATCAAACTaGACACTCAGGACCTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: FSPSTVWILKSKLRTSGGLMSSN*TLRTLR Trigger: TCTCAAGGTCCTGAGTGTCAAGTTTGATGACATGAG...TCCACCTGAGGTCCTGAGCTTGCTCTTCAGGATCCACACAGTGGAAGGAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CAA 90 bp | CTTTTTAACAGAGGAAGGGGCAGGGCCTGCGTGGAATACATCAGCCTTCTAACATCTATGGACTTGAGGTaGTTCTCCTTCAGGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LFNRGRGRACVEYISLLTSMDLR*FSFRSS Trigger: GCTGGACCTGAAGGAGAACAACCTCAAGTCCATAGA...TGTTAGAAGGCTGATGTATTCCACGCAGGCCCTGCCCCTTCCTCTGTTAAAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CAA 90 bp | CTTTTTAACAGAGGAAGGGGCAGGGCCTGCGTGGAATACATCAGCCTTCTAACAATCTCCTCTATGGACTaGAGGTTGTTCTCCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LFNRGRGRACVEYISLLTISSMD*RLFSFR Trigger: CCTGAAGGAGAACAACCTCAAGTCCATAGAGGAGAT...TGTTAGAAGGCTGATGTATTCCACGCAGGCCCTGCCCCTTCCTCTGTTAAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CAA 90 bp | CTTTTTAACAGAGGAAGGGGCAGGGCCTGCGTGGAATACATCAGCCTTCTAACACTGTTATACCACAGTTaGAGCACGGTCAGCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LFNRGRGRACVEYISLLTLLYHS*STVSFL Trigger: GAGAAAGCTGACCGTGCTCAAACTGTGGTATAACAG...TGTTAGAAGGCTGATGTATTCCACGCAGGCCCTGCCCCTTCCTCTGTTAAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CAA 90 bp | CTTTTTAACAGAGGAAGGGGCAGGGCCTGCGTGGAATACATCAGCCTTCTAACAAGGTATCTGATTTTGTaGCACAGGAAGAGGTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LFNRGRGRACVEYISLLTRYLIL*HRKRWE Trigger: CTCCCACCTCTTCCTGTGCAACAAAATCAGATACCT...TGTTAGAAGGCTGATGTATTCCACGCAGGCCCTGCCCCTTCCTCTGTTAAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CAA 90 bp | TTCTCTCCTTCCACTGTGTGGATCCTGAAGAGCAAGCTCAGGACCTCAGGTGGAGTAGATTTCCAATTTTaGGTGAAAGTACGGAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FSPSTVWILKSKLRTSGGVDFQF*VKVRRG Trigger: GCCTCTCCGTACTTTCACCAAAAATTGGAAATCTAC...TCCACCTGAGGTCCTGAGCTTGCTCTTCAGGATCCACACAGTGGAAGGAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS CCA 90 bp | ATGCTGTTATACCACAGTTTGAGCACGGTCAGCTTTCTCAAGTGCTaGAAGCTCACGATCTCCTCTATGGACTTGAGGTTGTTCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: MLLYHSLSTVSFLKC*KLTISSMDLRLFSF Trigger: GAAGGAGAACAACCTCAAGTCCATAGAGGAGATCGTGAGCTTCCAGCACTTGAGAAAGCTGACCGTGCTCAAACTGTGGTATAACAGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CAA 90 bp | TTCTCTCCTTCCACTGTGTGGATCCTGAAGAGCAAGCTCAGGACCTCAGGTGGAATGATGATTAGGAATTaGATGACCTTCAGCACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: FSPSTVWILKSKLRTSGGMMIRN*MTFSTV Trigger: GACTGTGCTGAAGGTCATCAAATTCCTAATCATCAT...TCCACCTGAGGTCCTGAGCTTGCTCTTCAGGATCCACACAGTGGAAGGAGAGAA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CAA 90 bp | TACTCTTGCTCAATAACAGACAATCTGCCTTTAAGTTCTTTAAGGCAGAGCTTTGGCAGCTCCAGGCGGTaGTGGGCATTTGTCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: YSCSITDNLPLSSLRQSFGSSRR*WAFVCS Trigger: GCTGCAGACAAATGCCCACAACCGCCTGGAGCTGCC...AAAGCTCTGCCTTAAAGAACTTAAAGGCAGATTGTCTGTTATTGAGCAAGAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CAA 90 bp | TGGCGTTCTATTAGGACCTTTCAACCAGAGCACCACCAGATGGCTGTTCTGTATAGGATTTTAAGGCTTTaGAGGTCCCTCAGAGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: WRSIRTFQPEHHQMAVLYRILRL*RSLRDS Trigger: GGAGTCTCTGAGGGACCTCAAAAGCCTTAAAATCCT...ATACAGAACAGCCATCTGGTGGTGCTCTGGTTGAAAGGTCCTAATAGAACGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CAA 90 bp | CTTTTTAACAGAGGAAGGGGCAGGGCCTGCGTGGAATACATCAGCCTTCTAACATTGGAGACGTTGCTCTaGATGGAAAGGATTTTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LFNRGRGRACVEYISLLTLETLL*MERILR Trigger: CCTTAAAATCCTTTCCATCAAGAGCAACGTCTCCAA...TGTTAGAAGGCTGATGTATTCCACGCAGGCCCTGCCCCTTCCTCTGTTAAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CAA 90 bp | TGGCGTTCTATTAGGACCTTTCAACCAGAGCACCACCAGATGGCTGTTCTGTATATCTTCTTCAGGTTGTaGAGCATCACCAGTTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WRSIRTFQPEHHQMAVLYIFFRL*SITSLV Trigger: CACCAAACTGGTGATGCTCAACAACCTGAAGAAGAT...ATACAGAACAGCCATCTGGTGGTGCTCTGGTTGAAAGGTCCTAATAGAACGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS-3UTR CAA 90 bp | TACTCTTGCTCAATAACAGACAATCTGCCTTTAAGTTCTTTAAGGCAGAGCTTTAGCTTCTGCCGCAGTTaGTCCGGGGTCCACTCGTTA | + |
|
Preference number: 5 (lower is better) Translates to: YSCSITDNLPLSSLRQSFSFCRS*SGVHSL Trigger: TAACGAGTGGACCCCGGACAAACTGCGGCAGAAGCT...AAAGCTCTGCCTTAAAGAACTTAAAGGCAGATTGTCTGTTATTGAGCAAGAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS TCA 90 bp | TGCAGAAGTAGAGTTCATCTGGGAGGCTCTCCACTTTGTTACAAGTaGTGGAAAAATACTGTAAACTTTGCAGAACTCCGATTTCGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: CRSRVHLGGSPLCYK*WKNTVNFAELRFRA Trigger: CGCCCGAAATCGGAGTTCTGCAAAGTTTACAGTATTTTTCCATCACTTGTAACAAAGTGGAGAGCCTCCCAGATGAACTCTACTTCTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
||
| CDS TCA 90 bp | GGCAGTCTCCCAGCTCGGGAGGGAGGACTTCAAAGTGATTGCCTTTaGTGTCTAAGTAGGAAAGAAATAGTAGATTTCCAATTTTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GSLPAREGGLQSDCL*CLSRKEIVDFQFLV Trigger: CACCAAAAATTGGAAATCTACTATTTCTTTCCTACTTAGACATCAAAGGCAATCACTTTGAAGTCCTCCCTCCCGAGCTGGGAGACTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS-3UTR CAA 90 bp | TACTCTTGCTCAATAACAGACAATCTGCCTTTAAGTTCTTTAAGGCAGAGCTTTACTGCCTGGGAGACATaGGGAACGGAAGAGTGGTTC | + |
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Preference number: 5 (lower is better) Translates to: YSCSITDNLPLSSLRQSFTAWET*GTEEWF Trigger: GAACCACTCTTCCGTTCCCAATGTCTCCCAGGCAGT...AAAGCTCTGCCTTAAAGAACTTAAAGGCAGATTGTCTGTTATTGAGCAAGAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS-3UTR CAA 90 bp | TGGCGTTCTATTAGGACCTTTCAACCAGAGCACCACCAGATGGCTGTTCTGTATTTGAGTTGTTTTAACTaGTTCTCGCTGACTTCAGAC | + |
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Preference number: 5 (lower is better) Translates to: WRSIRTFQPEHHQMAVLYLSCFN*FSLTSD Trigger: GTCTGAAGTCAGCGAGAACAAGTTAAAACAACTCAA...ATACAGAACAGCCATCTGGTGGTGCTCTGGTTGAAAGGTCCTAATAGAACGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS-3UTR CAA 90 bp | TACTCTTGCTCAATAACAGACAATCTGCCTTTAAGTTCTTTAAGGCAGAGCTTTTTTTCAGGAATTGACTaGAGAGACTGGGACCTCACC | + |
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Preference number: 5 (lower is better) Translates to: YSCSITDNLPLSSLRQSFFSGID*RDWDLT Trigger: GGTGAGGTCCCAGTCTCTCAAGTCAATTCCTGAAAA...AAAGCTCTGCCTTAAAGAACTTAAAGGCAGATTGTCTGTTATTGAGCAAGAGTA 41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS-3UTR CAA 90 bp | CATCGGATGCATCCACATATCAAGGCATCAAAAGTGATTAAATTACTCAAAACAAGTTTGGTGCCATCATaGTGGACGCACATCTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: HRMHPHIKASKVIKLLKTSLVPS*WTHIFW Trigger: CCAGAAGATGTGCGTCCACAATGATGGCACCAAACT...TGTTTTGAGTAATTTAATCACTTTTGATGCCTTGATATGTGGATGCATCCGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS-3UTR CAA 90 bp | CATCGGATGCATCCACATATCAAGGCATCAAAAGTGATTAAATTACTCAAAACATTGAGCATCACCAGTTaGGTGCCATCATTGTGGACG | + |
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Preference number: 5 (lower is better) Translates to: HRMHPHIKASKVIKLLKTLSITS*VPSLWT Trigger: CGTCCACAATGATGGCACCAAACTGGTGATGCTCAA...TGTTTTGAGTAATTTAATCACTTTTGATGCCTTGATATGTGGATGCATCCGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS-3UTR CAA 90 bp | TACTCTTGCTCAATAACAGACAATCTGCCTTTAAGTTCTTTAAGGCAGAGCTTTGGAAGGCAGATGATCTaGTCTTGCATGACCTGTAAA | + |
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Preference number: 5 (lower is better) Translates to: YSCSITDNLPLSSLRQSFGRQMI*SCMTCK Trigger: TTTACAGGTCATGCAAGACAAGATCATCTGCCTTCC...AAAGCTCTGCCTTAAAGAACTTAAAGGCAGATTGTCTGTTATTGAGCAAGAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS-3UTR CAA 90 bp | TACTCTTGCTCAATAACAGACAATCTGCCTTTAAGTTCTTTAAGGCAGAGCTTTGTCATCTTCTTCAGGTaGTTGAGCATCACCAGTTTG | + |
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Preference number: 5 (lower is better) Translates to: YSCSITDNLPLSSLRQSFVIFFR*LSITSL Trigger: CAAACTGGTGATGCTCAACAACCTGAAGAAGATGAC...AAAGCTCTGCCTTAAAGAACTTAAAGGCAGATTGTCTGTTATTGAGCAAGAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS-3UTR CAA 90 bp | TACTCTTGCTCAATAACAGACAATCTGCCTTTAAGTTCTTTAAGGCAGAGCTTTAGCACCTCTACCTTATaGTGGCTGAAAAACAGTCTC | + |
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Preference number: 5 (lower is better) Translates to: YSCSITDNLPLSSLRQSFSTSTL*WLKNSL Trigger: GAGACTGTTTTTCAGCCACAATAAGGTAGAGGTGCT...AAAGCTCTGCCTTAAAGAACTTAAAGGCAGATTGTCTGTTATTGAGCAAGAGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS-3UTR CAA 90 bp | TACTCTTGCTCAATAACAGACAATCTGCCTTTAAGTTCTTTAAGGCAGAGCTTTATGAAATGTTCTATTTaGGAACTGGATCCGGGGAAT | + |
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Preference number: 5 (lower is better) Translates to: YSCSITDNLPLSSLRQSFMKCSI*ELDPGN Trigger: ATTCCCCGGATCCAGTTCCAAAATAGAACATTTCAT...AAAGCTCTGCCTTAAAGAACTTAAAGGCAGATTGTCTGTTATTGAGCAAGAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS GCA 72 bp | GAGAGCGCGGCGCTGTGGATCTTGACGGAGCACTGGTaGAGACAGAGCTCCTGCAGGTTGTCTAGCTGGGCG | + |
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Preference number: 6 (lower is better) Translates to: ESAALWILTEHW*RQSSCRLSSWA Trigger: CGCCCAGCTAGACAACCTGCAGGAGCTCTGTCTGCACCAGTGCTCCGTCAAGATCCACAGCGCCGCGCTCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS GCA 72 bp | ATCAGCGGCAGCTCCAGGCGGTTGTGGGCATTTGTCTaGAGCTTCTGCCGCAGTTTGTCCGGGGTCCACTCG | + |
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Preference number: 6 (lower is better) Translates to: ISGSSRRLWAFV*SFCRSLSGVHS Trigger: CGAGTGGACCCCGGACAAACTGCGGCAGAAGCTGCAGACAAATGCCCACAACCGCCTGGAGCTGCCGCTGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS CAA 72 bp | TCAGGAATTGACTTGAGAGACTGGGACCTCACCAGGTaGCCCTCGGGACCAGACTGGATGGTGCCGGACCTG | + |
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Preference number: 6 (lower is better) Translates to: SGIDLRDWDLTR*PSGPDWMVPDL Trigger: CAGGTCCGGCACCATCCAGTCTGGTCCCGAGGGCAACCTGGTGAGGTCCCAGTCTCTCAAGTCAATTCCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS CAA 90 bp | ACCTTGAGATTCTCCTTCAGGAAGGAGAGCGCGGCGCTGTGGATCTaGACGGAGCACTGGTGCAGACAGAGCTCCTGCAGGTTGTCTAGC | + |
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Preference number: 6 (lower is better) Translates to: TLRFSFRKESAALWI*TEHWCRQSSCRLSS Trigger: GCTAGACAACCTGCAGGAGCTCTGTCTGCACCAGTGCTCCGTCAAGATCCACAGCGCCGCGCTCTCCTTCCTGAAGGAGAATCTCAAGGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS CCA 72 bp | TTGAGATTCTCCTTCAGGAAGGAGAGCGCGGCGCTGTaGATCTTGACGGAGCACTGGTGCAGACAGAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LRFSFRKESAAL*ILTEHWCRQSS Trigger: GGAGCTCTGTCTGCACCAGTGCTCCGTCAAGATCCACAGCGCCGCGCTCTCCTTCCTGAAGGAGAATCTCAA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS CAA 90 bp | GCCCCCGCAGCAGATTTGTCAACCACGAACTTTTCAGGAATTGACTaGAGAGACTGGGACCTCACCAGGTTGCCCTCGGGACCAGACTGG | + |
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Preference number: 6 (lower is better) Translates to: APAADLSTTNFSGID*RDWDLTRLPSGPDW Trigger: CCAGTCTGGTCCCGAGGGCAACCTGGTGAGGTCCCAGTCTCTCAAGTCAATTCCTGAAAAGTTCGTGGTTGACAAATCTGCTGCGGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS GCA 72 bp | GGGTTTAGGTGGGGGCAGCGGAGTGGTACTGATAACTaGCTGGGAGACATTGGGAACGGAAGAGTGGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: GFRWGQRSGTDN*LGDIGNGRVVL Trigger: CAGAACCACTCTTCCGTTCCCAATGTCTCCCAGGCAGTTATCAGTACCACTCCGCTGCCCCCACCTAAACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067924.13 ENSMUST00000153754.2 |
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| CDS CCA 72 bp | TGCCATCATTGTGGACGCACATCTTCTGGAGGTGGCTaGACACATCCACCACGGCCTGAGGGATCTTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: CHHCGRTSSGGG*THPPRPEGSWR Trigger: TCTCCAAGATCCCTCAGGCCGTGGTGGATGTGTCCAGCCACCTCCAGAAGATGTGCGTCCACAATGATGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS TCA 72 bp | ATCTTCTGGAGGTGGCTGGACACATCCACCACGGCCTaGGGGATCTTGGAGACGTTGCTCTTGATGGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: IFWRWLDTSTTA*GILETLLLMER Trigger: CCTTTCCATCAAGAGCAACGTCTCCAAGATCCCTCAGGCCGTGGTGGATGTGTCCAGCCACCTCCAGAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS CAA 90 bp | ACGAACTTTTCAGGAATTGACTTGAGAGACTGGGACCTCACCAGGTaGCCCTCGGGACCAGACTGGATGGTGCCGGACCTGTTCATGTTG | + |
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Preference number: 6 (lower is better) Translates to: TNFSGIDLRDWDLTR*PSGPDWMVPDLFML Trigger: CAACATGAACAGGTCCGGCACCATCCAGTCTGGTCCCGAGGGCAACCTGGTGAGGTCCCAGTCTCTCAAGTCAATTCCTGAAAAGTTCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS TCA 72 bp | CCAGCTCCGTCAGGTTGGTCATCTTCTTCAGGTTGTTaGGCATCACCAGTTTGGTGCCATCATTGTGGACGC | + |
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Preference number: 6 (lower is better) Translates to: PAPSGWSSSSGC*ASPVWCHHCGR Trigger: GCGTCCACAATGATGGCACCAAACTGGTGATGCTCAACAACCTGAAGAAGATGACCAACCTGACGGAGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS CCA 72 bp | AGGTTGTTGAGCATCACCAGTTTGGTGCCATCATTGTaGACGCACATCTTCTGGAGGTGGCTGGACACATCC | + |
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Preference number: 6 (lower is better) Translates to: RLLSITSLVPSL*THIFWRWLDTS Trigger: GGATGTGTCCAGCCACCTCCAGAAGATGTGCGTCCACAATGATGGCACCAAACTGGTGATGCTCAACAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS CAA 90 bp | GTCATCTTCTTCAGGTTGTTGAGCATCACCAGTTTGGTGCCATCATaGTGGACGCACATCTTCTGGAGGTGGCTGGACACATCCACCACG | + |
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Preference number: 6 (lower is better) Translates to: VIFFRLLSITSLVPS*WTHIFWRWLDTSTT Trigger: CGTGGTGGATGTGTCCAGCCACCTCCAGAAGATGTGCGTCCACAATGATGGCACCAAACTGGTGATGCTCAACAACCTGAAGAAGATGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS CAA 90 bp | TCCGTCAGGTTGGTCATCTTCTTCAGGTTGTTGAGCATCACCAGTTaGGTGCCATCATTGTGGACGCACATCTTCTGGAGGTGGCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: SVRLVIFFRLLSITS*VPSLWTHIFWRWLD Trigger: GTCCAGCCACCTCCAGAAGATGTGCGTCCACAATGATGGCACCAAACTGGTGATGCTCAACAACCTGAAGAAGATGACCAACCTGACGGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS TCA 72 bp | CAGATTTGTCAACCACGAACTTTTCAGGAATTGACTTaGGAGACTGGGACCTCACCAGGTTGCCCTCGGGAC | + |
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Preference number: 6 (lower is better) Translates to: QICQPRTFQELT*ETGTSPGCPRD Trigger: GTCCCGAGGGCAACCTGGTGAGGTCCCAGTCTCTCAAGTCAATTCCTGAAAAGTTCGTGGTTGACAAATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS TCA 72 bp | CGCAGCAGATTTGTCAACCACGAACTTTTCAGGAATTaGCTTGAGAGACTGGGACCTCACCAGGTTGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: RSRFVNHELFRN*LERLGPHQVAL Trigger: GAGGGCAACCTGGTGAGGTCCCAGTCTCTCAAGTCAATTCCTGAAAAGTTCGTGGTTGACAAATCTGCTGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS TCA 72 bp | CCGTCATGTCCTGGATGTCCACATTACAGTCCACTGTaGACTGGACTTTGGAAACCAGGGCACTGTTGTAGG | + |
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Preference number: 6 (lower is better) Translates to: PSCPGCPHYSPL*TGLWKPGHCCR Trigger: CCTACAACAGTGCCCTGGTTTCCAAAGTCCAGTTCACAGTGGACTGTAATGTGGACATCCAGGACATGACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS CCA 72 bp | AGGAAGAGGTGGGAGGGAAGCACCTCTACCTTATTGTaGCTGAAAAACAGTCTCTCCAGGCTGGTCAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: RKRWEGSTSTLL*LKNSLSRLVSF Trigger: GAAACTGACCAGCCTGGAGAGACTGTTTTTCAGCCACAATAAGGTAGAGGTGCTTCCCTCCCACCTCTTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS CAA 72 bp | GCAGATTTGTCAACCACGAACTTTTCAGGAATTGACTaGAGAGACTGGGACCTCACCAGGTTGCCCTCGGGA | + |
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Preference number: 6 (lower is better) Translates to: ADLSTTNFSGID*RDWDLTRLPSG Trigger: TCCCGAGGGCAACCTGGTGAGGTCCCAGTCTCTCAAGTCAATTCCTGAAAAGTTCGTGGTTGACAAATCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS CAA 72 bp | TTCAGGTTGTTGAGCATCACCAGTTTGGTGCCATCATaGTGGACGCACATCTTCTGGAGGTGGCTGGACACA | + |
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Preference number: 6 (lower is better) Translates to: FRLLSITSLVPS*WTHIFWRWLDT Trigger: TGTGTCCAGCCACCTCCAGAAGATGTGCGTCCACAATGATGGCACCAAACTGGTGATGCTCAACAACCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS CAA 72 bp | TTGGTCATCTTCTTCAGGTTGTTGAGCATCACCAGTTaGGTGCCATCATTGTGGACGCACATCTTCTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: LVIFFRLLSITS*VPSLWTHIFWR Trigger: CCTCCAGAAGATGTGCGTCCACAATGATGGCACCAAACTGGTGATGCTCAACAACCTGAAGAAGATGACCAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS CAA 90 bp | GGGATCTTGGAGACGTTGCTCTTGATGGAAAGGATTTTAAGGCTTTaGAGGTCCCTCAGAGACTCCAGGGTGACATTTTTGGAGATGTCG | + |
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Preference number: 6 (lower is better) Translates to: GILETLLLMERILRL*RSLRDSRVTFLEMS Trigger: CGACATCTCCAAAAATGTCACCCTGGAGTCTCTGAGGGACCTCAAAAGCCTTAAAATCCTTTCCATCAAGAGCAACGTCTCCAAGATCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS GCA 72 bp | TTTTTCACATCCGGAATGTCATCGATTCCCGTCTCCTaGCGGACATACTCGAAGGAATATTCCCTCAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: FFTSGMSSIPVS*RTYSKEYSLRE Trigger: TTCTCTGAGGGAATATTCCTTCGAGTATGTCCGGCAGGAGACGGGAATCGATGACATTCCGGATGTGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS CAA 72 bp | GAGACGTTGCTCTTGATGGAAAGGATTTTAAGGCTTTaGAGGTCCCTCAGAGACTCCAGGGTGACATTTTTG | + |
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Preference number: 6 (lower is better) Translates to: ETLLLMERILRL*RSLRDSRVTFL Trigger: CAAAAATGTCACCCTGGAGTCTCTGAGGGACCTCAAAAGCCTTAAAATCCTTTCCATCAAGAGCAACGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS TCA 72 bp | AGAGTTCATCTGGGAGGCTCTCCACTTTGTTACAAGTaGTGGAAAAATACTGTAAACTTTGCAGAACTCCGA | + |
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Preference number: 6 (lower is better) Translates to: RVHLGGSPLCYK*WKNTVNFAELR Trigger: TCGGAGTTCTGCAAAGTTTACAGTATTTTTCCATCACTTGTAACAAAGTGGAGAGCCTCCCAGATGAACTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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| CDS CCA 72 bp | CAAAGTTTTAAGTTTCTTGCAGAAGTAGAGTTCATCTaGGAGGCTCTCCACTTTGTTACAAGTGATGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: QSFKFLAEVEFI*EALHFVTSDGK Trigger: TTTTCCATCACTTGTAACAAAGTGGAGAGCCTCCCAGATGAACTCTACTTCTGCAAGAAACTTAAAACTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067924.13 |
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